AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0736330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0736330 MtrunA17_Chr5g0433601 98.681 379 5 0 1 379 1 379 0.0 773
Msa0736330 MtrunA17_Chr3g0095661 69.162 334 81 3 77 406 37 352 5.59e-164 466
Msa0736330 MtrunA17_Chr5g0442671 70.253 316 77 3 94 406 44 345 1.06e-159 455
Msa0736330 MtrunA17_Chr3g0121311 68.571 245 77 0 138 382 86 330 2.07e-128 375
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0736330 AT5G17230.2 68.241 381 101 6 2 379 4 367 0.0 516
Msa0736330 AT5G17230.1 68.241 381 101 6 2 379 4 367 0.0 516
Msa0736330 AT5G17230.4 68.241 381 101 6 2 379 4 367 0.0 516
Msa0736330 AT5G17230.3 65.657 396 101 7 2 379 4 382 4.75e-179 506

Find 127 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCATTTCATTCTACAAAA+AGG 0.169857 5_1:-52460953 Msa0736330:five_prime_UTR
ATGGTATACTCGATTCTTTC+GGG 0.176386 5_1:-52459888 Msa0736330:CDS
CCTTCTATCATATCTTTAAA+TGG 0.198005 5_1:+52458283 None:intergenic
TCATGTCTGTGACATTATTA+AGG 0.208507 5_1:-52459948 Msa0736330:CDS
TTCCCAGGCAAAACAATTTC+CGG 0.216388 5_1:+52459562 None:intergenic
CCGAAAGGCGAAGAGCTATT+TGG 0.218249 5_1:-52459349 Msa0736330:CDS
CAAATAGCTCTTCGCCTTTC+GGG 0.241550 5_1:+52459350 None:intergenic
TTTCTATGAAGAGAGTTTAA+TGG 0.242220 5_1:-52460061 Msa0736330:five_prime_UTR
TCATGAAGAGCCAAATTAAA+AGG 0.246269 5_1:-52457736 Msa0736330:CDS
CACTAATTTGTAGTCAATAT+TGG 0.252805 5_1:-52456653 Msa0736330:three_prime_UTR
GCTATTATATCGACAAATAT+TGG 0.253653 5_1:-52456905 Msa0736330:three_prime_UTR
CCAAATAGCTCTTCGCCTTT+CGG 0.257174 5_1:+52459349 None:intergenic
CTGTTGAAATTCTTTGTATA+TGG 0.282950 5_1:+52460979 None:intergenic
AGTAATCATTAAATAACTTC+TGG 0.290242 5_1:-52457444 Msa0736330:three_prime_UTR
CACTAAATTCTCCACTCTTC+TGG 0.297134 5_1:+52460867 None:intergenic
TGCTTCCACTCCTAGCTTAG+AGG 0.306439 5_1:-52459923 Msa0736330:CDS
TCAAACTCTTATTATTGAAT+TGG 0.316393 5_1:-52456984 Msa0736330:three_prime_UTR
TTAATCACAGTTAGCTTTGC+TGG 0.322087 5_1:-52460166 Msa0736330:intron
TGGTAATGACAAACACAAAA+AGG 0.322521 5_1:-52456722 Msa0736330:three_prime_UTR
AATGGTATACTCGATTCTTT+CGG 0.323019 5_1:-52459889 Msa0736330:CDS
AGGATTCATATTTGAGGAAT+AGG 0.323628 5_1:-52460030 Msa0736330:five_prime_UTR
TGGTAAAGAAAGTAACTTCT+TGG 0.327130 5_1:+52456825 None:intergenic
TGTAACACAAAAGGGTGTTT+TGG 0.346211 5_1:-52456951 Msa0736330:three_prime_UTR
CGAAAGGCGAAGAGCTATTT+GGG 0.347088 5_1:-52459348 Msa0736330:CDS
CTCTACTGTTACTATGTTGC+TGG 0.359851 5_1:-52458208 Msa0736330:CDS
CCACTTGTCTGTCACCTTAC+CGG 0.360789 5_1:+52457766 None:intergenic
GCTGTAATATGTGAAGCATT+AGG 0.366470 5_1:+52458805 None:intergenic
CATGTCTGTGACATTATTAA+GGG 0.371237 5_1:-52459947 Msa0736330:CDS
AGATGACACAATGCAAAGTA+TGG 0.371885 5_1:-52461073 Msa0736330:five_prime_UTR
GGTTCTGAAGCAGGCGTCTT+TGG 0.372578 5_1:-52459626 Msa0736330:CDS
TCAGATGACGACATATTTGC+CGG 0.386677 5_1:-52457785 Msa0736330:CDS
ACTTGCATATGCTAGATCTA+TGG 0.394076 5_1:-52456803 Msa0736330:three_prime_UTR
TATATGTAAGTGTGTATAGA+TGG 0.395073 5_1:-52457577 Msa0736330:CDS
CTGTAATATGTGAAGCATTA+GGG 0.396810 5_1:+52458806 None:intergenic
CATTAATCCAATAAAATCCT+TGG 0.399285 5_1:+52460129 None:intergenic
TGTTTGGTTGAATTTCTTAC+CGG 0.401442 5_1:+52457650 None:intergenic
TGTTGGTTTAATGAGTGTTC+CGG 0.406495 5_1:-52458182 Msa0736330:CDS
GTATCTACCACAAGATGAAT+TGG 0.407019 5_1:-52457822 Msa0736330:CDS
AGAGCTATTTGGGCAATATA+TGG 0.408215 5_1:-52459338 Msa0736330:intron
CAATATTGACTACAAATTAG+TGG 0.416775 5_1:+52456654 None:intergenic
GTAATCATTAAATAACTTCT+GGG 0.417253 5_1:-52457443 Msa0736330:three_prime_UTR
CAGATTTCCTGTTGATATCC+AGG 0.418869 5_1:-52458689 Msa0736330:intron
ATCAATACCTGGATATCAAC+AGG 0.418894 5_1:+52458682 None:intergenic
ATTATACAAAACCTTCTTTG+TGG 0.419373 5_1:-52457625 Msa0736330:CDS
CAGAAGAGTGGAGAATTTAG+TGG 0.427449 5_1:-52460866 Msa0736330:five_prime_UTR
TAATGCAAGTTTCTTTGCAT+TGG 0.430238 5_1:-52460111 Msa0736330:five_prime_UTR
CAAGATGAATTGGCTCTGGC+AGG 0.432002 5_1:-52457812 Msa0736330:CDS
AGCAGGCGTCTTTGGTTAAG+AGG 0.432850 5_1:-52459618 Msa0736330:CDS
ATTACAACAATTTCACTAAG+AGG 0.435955 5_1:-52456864 Msa0736330:three_prime_UTR
TTTAATGAGTGTTCCGGTCA+TGG 0.437974 5_1:-52458176 Msa0736330:CDS
ATCGAGTATACCATTGGAAC+AGG 0.442296 5_1:+52459897 None:intergenic
CCATTTAAAGATATGATAGA+AGG 0.449064 5_1:-52458283 Msa0736330:CDS
TTATGATGTGGTTCTGAAGC+AGG 0.451633 5_1:-52459635 Msa0736330:CDS
CGGTGAACTTGAAGTGAAAC+CGG 0.459098 5_1:-52459581 Msa0736330:CDS
TGAGGAATAGGACGAAGTTA+AGG 0.459876 5_1:-52460018 Msa0736330:five_prime_UTR
TACTATGTTGCTGGAACTGT+TGG 0.460078 5_1:-52458199 Msa0736330:CDS
TACAATGCTGCCTTGGCCTT+AGG 0.462846 5_1:-52458115 Msa0736330:CDS
TATGATAGAAGGAATGAGAA+TGG 0.470612 5_1:-52458272 Msa0736330:CDS
GGATAGGTGGGAATCAAGAT+TGG 0.482924 5_1:-52458773 Msa0736330:CDS
GCAGCATCAAGCATATCAAA+TGG 0.485476 5_1:+52458730 None:intergenic
TTTGAAGCTTGACCAATGTA+TGG 0.490072 5_1:+52461003 None:intergenic
TATGCGTGTGTTGGTCAGCC+TGG 0.491009 5_1:-52459748 Msa0736330:CDS
GGCTGTTTCGTCTGAGCAGA+AGG 0.495434 5_1:-52459659 Msa0736330:CDS
TTCAGTGTGGTGTAGGAGGA+CGG 0.496266 5_1:-52458845 Msa0736330:intron
TTCTCAAGGATTCATATTTG+AGG 0.496451 5_1:-52460036 Msa0736330:five_prime_UTR
AAGAGGAAGCTGAGCTCTAC+CGG 0.500218 5_1:-52459601 Msa0736330:CDS
TGCGTTGAAATGCCCATGAC+CGG 0.505460 5_1:+52458163 None:intergenic
TAGCTGATTTGCAATTCCTA+AGG 0.507538 5_1:+52458099 None:intergenic
TTAATGAGTGTTCCGGTCAT+GGG 0.510615 5_1:-52458175 Msa0736330:CDS
GCATATCAAATGGACGCCCT+TGG 0.512063 5_1:+52458740 None:intergenic
CAGCCACTTCTCCTGCAGTC+GGG 0.512372 5_1:+52459677 None:intergenic
GAAAACTTCAGCCACAAAGA+AGG 0.513579 5_1:+52457614 None:intergenic
AGGACGGATGAACTTGTTGA+TGG 0.515418 5_1:-52458829 Msa0736330:CDS
ACCACAAGATGAATTGGCTC+TGG 0.516944 5_1:-52457816 Msa0736330:CDS
CATGAAGAGCCAAATTAAAA+GGG 0.517837 5_1:-52457735 Msa0736330:CDS
CGGTTTCACTTCAAGTTCAC+CGG 0.518111 5_1:+52459582 None:intergenic
ATTTGTTATGCTCTTATGTG+TGG 0.525924 5_1:-52457144 Msa0736330:three_prime_UTR
TGACGACATATTTGCCGGTA+AGG 0.527146 5_1:-52457780 Msa0736330:CDS
ATTTCATCATATACAAAATG+TGG 0.527430 5_1:+52456695 None:intergenic
TTACAACAATTTCACTAAGA+GGG 0.529341 5_1:-52456863 Msa0736330:three_prime_UTR
AGTTAGCTTTGCTGGAAAAG+TGG 0.531406 5_1:-52460158 Msa0736330:five_prime_UTR
GTGCTCGCGAACCCGACTGC+AGG 0.534982 5_1:-52459688 Msa0736330:CDS
ACCAACATACTCAGAGATGT+TGG 0.536889 5_1:-52458076 Msa0736330:CDS
CAGCAACTGCAATGGATAGG+TGG 0.537534 5_1:-52458786 Msa0736330:CDS
GAAAGAATCGAGTATACCAT+TGG 0.546886 5_1:+52459891 None:intergenic
CTCAACAAACTCAAATTCCC+AGG 0.554708 5_1:+52459547 None:intergenic
AGCAACTGCAATGGATAGGT+GGG 0.555214 5_1:-52458785 Msa0736330:CDS
TAGATACACTCTTCCTCGCC+TGG 0.558995 5_1:+52457838 None:intergenic
CGAGCACATTCGATAACAAA+GGG 0.559386 5_1:+52459704 None:intergenic
TTACTAGCACTCTCTAAGCC+AGG 0.559394 5_1:+52459730 None:intergenic
ATTTGCAATTCCTAAGGCCA+AGG 0.562166 5_1:+52458105 None:intergenic
ACAGCCACTTCTCCTGCAGT+CGG 0.565483 5_1:+52459676 None:intergenic
TTAGAGGTCTCCTGTTCCAA+TGG 0.570133 5_1:-52459907 Msa0736330:CDS
GATATTAAGTATGCGTGTGT+TGG 0.573483 5_1:-52459757 Msa0736330:CDS
AGTGGGTCATATTATTCATG+AGG 0.576517 5_1:-52460848 Msa0736330:intron
GAGTGTGTACAATGCTGCCT+TGG 0.577004 5_1:-52458122 Msa0736330:CDS
CAATGAACAGAGCAGATGGC+CGG 0.577565 5_1:-52457669 Msa0736330:CDS
GCCAGAGCCAATTCATCTTG+TGG 0.580658 5_1:+52457815 None:intergenic
TCCAACATCTCTGAGTATGT+TGG 0.584691 5_1:+52458075 None:intergenic
AGCTCAATGAACAGAGCAGA+TGG 0.586885 5_1:-52457673 Msa0736330:CDS
TTACAGCAACTGCAATGGAT+AGG 0.587244 5_1:-52458789 Msa0736330:CDS
ACATATTACAGCAACTGCAA+TGG 0.587371 5_1:-52458794 Msa0736330:CDS
AAGATGAATTGGCTCTGGCA+GGG 0.589323 5_1:-52457811 Msa0736330:CDS
GAACAGGAGACCTCTAAGCT+AGG 0.593065 5_1:+52459913 None:intergenic
TGGTATACTCGATTCTTTCG+GGG 0.602789 5_1:-52459887 Msa0736330:CDS
GAAGTTAAGGTAAGCTAACA+AGG 0.603537 5_1:-52460005 Msa0736330:five_prime_UTR
GAACCCGACTGCAGGAGAAG+TGG 0.603987 5_1:-52459680 Msa0736330:CDS
TGAGCAGAAGGTTTATGATG+TGG 0.604299 5_1:-52459647 Msa0736330:CDS
GGAGACCTCTAAGCTAGGAG+TGG 0.607795 5_1:+52459918 None:intergenic
TGAGGCAGAAAAGGGAGTGA+CGG 0.617889 5_1:-52457696 Msa0736330:CDS
ATTGTACACACTCTCTGTTG+TGG 0.620184 5_1:+52458132 None:intergenic
CCGGTAAGGTGACAGACAAG+TGG 0.621228 5_1:-52457766 Msa0736330:CDS
ACAAGCAAACTCCAGAAGAG+TGG 0.625192 5_1:-52460878 Msa0736330:five_prime_UTR
GCGAGCACATTCGATAACAA+AGG 0.625781 5_1:+52459703 None:intergenic
AGAAGAGTGGAGAATTTAGT+GGG 0.630546 5_1:-52460865 Msa0736330:five_prime_UTR
CTCTTCTAATGACTCCCGAA+AGG 0.631131 5_1:-52459364 Msa0736330:CDS
GTTTGAACTTGTAACCTCGA+GGG 0.633592 5_1:+52457001 None:intergenic
TTTCCTAACAGTGCCAGGCG+AGG 0.637716 5_1:-52457851 Msa0736330:intron
AGTGAAGCATATGATAGATG+TGG 0.638875 5_1:-52459526 Msa0736330:CDS
TGGAACTCACAACCATACAT+TGG 0.648155 5_1:-52461015 Msa0736330:five_prime_UTR
AGTTTGAACTTGTAACCTCG+AGG 0.650011 5_1:+52457000 None:intergenic
GATTTGAATTTCATCCCTCG+AGG 0.653966 5_1:-52457015 Msa0736330:three_prime_UTR
ATAGATCTAGCATATGCAAG+TGG 0.656749 5_1:+52456805 None:intergenic
AACTTGATAACACAATCGTG+TGG 0.658339 5_1:-52461035 Msa0736330:five_prime_UTR
CATACTCAGAGATGTTGGAG+AGG 0.697210 5_1:-52458071 Msa0736330:CDS
GTAAGGTGACAGACAAGTGG+AGG 0.698008 5_1:-52457763 Msa0736330:CDS
GTTAAGGTAAGCTAACAAGG+AGG 0.748289 5_1:-52460002 Msa0736330:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAATAACTTCT+AGG - chr5_1:52460335-52460354 Msa0736330:intron 10.0%
!!! TAAATTACTAATCTTTTTAG+TGG - chr5_1:52456918-52456937 Msa0736330:three_prime_UTR 15.0%
!! CTAATAAGTTCTTAATTTAA+AGG - chr5_1:52457139-52457158 Msa0736330:three_prime_UTR 15.0%
!!! GATTATGATAACAAATATTT+TGG - chr5_1:52458450-52458469 Msa0736330:intron 15.0%
!!! TTTAAAATAACTTACATACA+TGG - chr5_1:52458616-52458635 Msa0736330:intron 15.0%
!!! AAATTGATCTTTATTTATGT+AGG + chr5_1:52458793-52458812 None:intergenic 15.0%
!! TTTCATGTATATATCTAATT+TGG + chr5_1:52459090-52459109 None:intergenic 15.0%
!! AATCTATGTAAAAAAAACTT+AGG + chr5_1:52459774-52459793 None:intergenic 15.0%
!! TAGATTAAGAAATATAATGT+TGG - chr5_1:52459788-52459807 Msa0736330:CDS 15.0%
!! GATATAGTTATTTAGAAAAA+TGG - chr5_1:52460992-52461011 Msa0736330:five_prime_UTR 15.0%
!!! ATTTTGTATATGATGAAATA+AGG - chr5_1:52461043-52461062 Msa0736330:five_prime_UTR 15.0%
!! TCATACATATGTTCAATTAA+TGG - chr5_1:52456976-52456995 Msa0736330:three_prime_UTR 20.0%
!!! TTTGTCATGATTTTAAATTG+CGG - chr5_1:52457310-52457329 Msa0736330:three_prime_UTR 20.0%
!!! TGAAATTTTATTGTTTGTGT+TGG - chr5_1:52457544-52457563 Msa0736330:exon 20.0%
!!! ATATGCTAAAACATTTTACT+TGG - chr5_1:52458246-52458265 Msa0736330:CDS 20.0%
!!! TATGCTAAAACATTTTACTT+GGG - chr5_1:52458247-52458266 Msa0736330:CDS 20.0%
!!! TGTTAATTATTTCAGTTTTG+TGG - chr5_1:52458303-52458322 Msa0736330:intron 20.0%
!!! TAAATTTGCTAAGTTTTCAA+GGG - chr5_1:52458509-52458528 Msa0736330:intron 20.0%
!! TTCTTATAGACAACAAAAAT+TGG - chr5_1:52458684-52458703 Msa0736330:intron 20.0%
!! TTTGTATATACATCTGATTA+GGG + chr5_1:52458816-52458835 None:intergenic 20.0%
!! TTATATCTGAGGAAAAAAAA+TGG - chr5_1:52459294-52459313 Msa0736330:intron 20.0%
!! AGTAATCATTAAATAACTTC+TGG - chr5_1:52460290-52460309 Msa0736330:intron 20.0%
!! GTAATCATTAAATAACTTCT+GGG - chr5_1:52460291-52460310 Msa0736330:intron 20.0%
!! TCAAACTCTTATTATTGAAT+TGG - chr5_1:52460750-52460769 Msa0736330:intron 20.0%
!!! ATTTTAGTATGTAACACAAA+AGG - chr5_1:52460774-52460793 Msa0736330:intron 20.0%
!!! TTTTAGTATGTAACACAAAA+GGG - chr5_1:52460775-52460794 Msa0736330:intron 20.0%
!! ATTTCATCATATACAAAATG+TGG + chr5_1:52461042-52461061 None:intergenic 20.0%
! CTGTTGAAATTCTTTGTATA+TGG + chr5_1:52456758-52456777 None:intergenic 25.0%
!! TTTTGTAGAATGAAATGGAA+TGG + chr5_1:52456781-52456800 None:intergenic 25.0%
! TTCCATTTCATTCTACAAAA+AGG - chr5_1:52456781-52456800 Msa0736330:three_prime_UTR 25.0%
! TCCATTTCATTCTACAAAAA+GGG - chr5_1:52456782-52456801 Msa0736330:three_prime_UTR 25.0%
!! CCACAATATAAAAGTTTTTG+AGG + chr5_1:52457425-52457444 None:intergenic 25.0%
!! CCTCAAAAACTTTTATATTG+TGG - chr5_1:52457422-52457441 Msa0736330:three_prime_UTR 25.0%
!!! AGAATCATGGTTTTAAATTG+CGG + chr5_1:52457449-52457468 None:intergenic 25.0%
! CATTAATCCAATAAAATCCT+TGG + chr5_1:52457608-52457627 None:intergenic 25.0%
! TTTCTATGAAGAGAGTTTAA+TGG - chr5_1:52457673-52457692 Msa0736330:CDS 25.0%
! AGAATGATAAGAAAAAGACA+CGG - chr5_1:52457933-52457952 Msa0736330:intron 25.0%
! TATTATCTTTCCTTAAAGTG+AGG - chr5_1:52458279-52458298 Msa0736330:CDS 25.0%
! TAATTAACATCCTCACTTTA+AGG + chr5_1:52458292-52458311 None:intergenic 25.0%
!!! GTAAATTTGCTAAGTTTTCA+AGG - chr5_1:52458508-52458527 Msa0736330:intron 25.0%
! AAAATGAACTTAGTACATGA+CGG + chr5_1:52458750-52458769 None:intergenic 25.0%
! CTTTGTATATACATCTGATT+AGG + chr5_1:52458817-52458836 None:intergenic 25.0%
!! TCCTCTAAACTTTAGAAAAT+AGG - chr5_1:52458848-52458867 Msa0736330:intron 25.0%
!! CCTCTAAACTTTAGAAAATA+GGG - chr5_1:52458849-52458868 Msa0736330:intron 25.0%
! GAACAAAATTAATCAATACC+TGG + chr5_1:52459066-52459085 None:intergenic 25.0%
! GTAGAAAACAACATTAAAGA+TGG + chr5_1:52459114-52459133 None:intergenic 25.0%
!!! AATGTTGTTTTCTACTTGAA+AGG - chr5_1:52459119-52459138 Msa0736330:intron 25.0%
! TCCACAAAATCATTATATGT+GGG + chr5_1:52459203-52459222 None:intergenic 25.0%
! TTCCACAAAATCATTATATG+TGG + chr5_1:52459204-52459223 None:intergenic 25.0%
! CAAAAACAAAAGATTAGGAT+AGG + chr5_1:52459422-52459441 None:intergenic 25.0%
! ATCGACAAAAACAAAAGATT+AGG + chr5_1:52459427-52459446 None:intergenic 25.0%
! CCTTCTATCATATCTTTAAA+TGG + chr5_1:52459454-52459473 None:intergenic 25.0%
! CCATTTAAAGATATGATAGA+AGG - chr5_1:52459451-52459470 Msa0736330:intron 25.0%
!!! ATTGTTTATTTTAGCAACAG+AGG + chr5_1:52459819-52459838 None:intergenic 25.0%
!!! AGGTTTTGTATAATGATGTT+TGG + chr5_1:52460103-52460122 None:intergenic 25.0%
! ATTATACAAAACCTTCTTTG+TGG - chr5_1:52460109-52460128 Msa0736330:five_prime_UTR 25.0%
! TATATGTAAGTGTGTATAGA+TGG - chr5_1:52460157-52460176 Msa0736330:five_prime_UTR 25.0%
! GCTATTATATCGACAAATAT+TGG - chr5_1:52460829-52460848 Msa0736330:intron 25.0%
! ATTACAACAATTTCACTAAG+AGG - chr5_1:52460870-52460889 Msa0736330:five_prime_UTR 25.0%
! TTACAACAATTTCACTAAGA+GGG - chr5_1:52460871-52460890 Msa0736330:five_prime_UTR 25.0%
!!! ACATGAGATAACTTTTTTGA+TGG + chr5_1:52460962-52460981 None:intergenic 25.0%
!! CAATATTGACTACAAATTAG+TGG + chr5_1:52461083-52461102 None:intergenic 25.0%
!! CACTAATTTGTAGTCAATAT+TGG - chr5_1:52461081-52461100 Msa0736330:five_prime_UTR 25.0%
! ACCCTTTTTGTAGAATGAAA+TGG + chr5_1:52456786-52456805 None:intergenic 30.0%
GTATGAAAACATCAACATCA+TGG + chr5_1:52456962-52456981 None:intergenic 30.0%
TAATGGCAAATTCATCTAAG+TGG - chr5_1:52456993-52457012 Msa0736330:three_prime_UTR 30.0%
AATGGCAAATTCATCTAAGT+GGG - chr5_1:52456994-52457013 Msa0736330:three_prime_UTR 30.0%
CACAGAAAAACAACTTTGTT+GGG + chr5_1:52457045-52457064 None:intergenic 30.0%
TCATAGCTAATATAAGCTGT+TGG - chr5_1:52457206-52457225 Msa0736330:three_prime_UTR 30.0%
ATGACAAAAAACACACAATG+GGG + chr5_1:52457298-52457317 None:intergenic 30.0%
CATGACAAAAAACACACAAT+GGG + chr5_1:52457299-52457318 None:intergenic 30.0%
TCATGACAAAAAACACACAA+TGG + chr5_1:52457300-52457319 None:intergenic 30.0%
TCATCATACAACAAGAATCA+TGG + chr5_1:52457462-52457481 None:intergenic 30.0%
! GTGTTTTCCAAGGATTTTAT+TGG - chr5_1:52457598-52457617 Msa0736330:CDS 30.0%
TAATGCAAGTTTCTTTGCAT+TGG - chr5_1:52457623-52457642 Msa0736330:CDS 30.0%
! GTTTGCTTGTGTTTTCAATT+GGG - chr5_1:52457645-52457664 Msa0736330:CDS 30.0%
! AGAGTTTAATGGTTTTCTCA+AGG - chr5_1:52457684-52457703 Msa0736330:CDS 30.0%
TTCTCAAGGATTCATATTTG+AGG - chr5_1:52457698-52457717 Msa0736330:CDS 30.0%
AGGATTCATATTTGAGGAAT+AGG - chr5_1:52457704-52457723 Msa0736330:CDS 30.0%
! TACTAAACTTTTGTCGTGTT+AGG + chr5_1:52457760-52457779 None:intergenic 30.0%
TCATGTCTGTGACATTATTA+AGG - chr5_1:52457786-52457805 Msa0736330:CDS 30.0%
CATGTCTGTGACATTATTAA+GGG - chr5_1:52457787-52457806 Msa0736330:CDS 30.0%
AATGGTATACTCGATTCTTT+CGG - chr5_1:52457845-52457864 Msa0736330:intron 30.0%
! TGAGTTGAGTCAATTTGTAT+TGG - chr5_1:52458328-52458347 Msa0736330:intron 30.0%
GAGTTGAGTCAATTTGTATT+GGG - chr5_1:52458329-52458348 Msa0736330:intron 30.0%
!!! TATTGGGTTTTTTTTCTCTC+AGG - chr5_1:52458345-52458364 Msa0736330:intron 30.0%
!!! CCCTATTTTCTAAAGTTTAG+AGG + chr5_1:52458852-52458871 None:intergenic 30.0%
! CTGTAATATGTGAAGCATTA+GGG + chr5_1:52458931-52458950 None:intergenic 30.0%
CCACAAAATCATTATATGTG+GGG + chr5_1:52459202-52459221 None:intergenic 30.0%
TGCAAAGAACATTATATCTG+AGG - chr5_1:52459283-52459302 Msa0736330:intron 30.0%
TATCTGAGGAAAAAAAATGG+CGG - chr5_1:52459297-52459316 Msa0736330:intron 30.0%
TATGATAGAAGGAATGAGAA+TGG - chr5_1:52459462-52459481 Msa0736330:intron 30.0%
GAAATGAAGTGAACAAACAT+CGG + chr5_1:52459705-52459724 None:intergenic 30.0%
ACTTAGGACGAAAGTTATTA+TGG + chr5_1:52459758-52459777 None:intergenic 30.0%
GGAAAATTGAGCATATGATA+AGG + chr5_1:52459868-52459887 None:intergenic 30.0%
TCATGAAGAGCCAAATTAAA+AGG - chr5_1:52459998-52460017 Msa0736330:five_prime_UTR 30.0%
CATGAAGAGCCAAATTAAAA+GGG - chr5_1:52459999-52460018 Msa0736330:five_prime_UTR 30.0%
!!! TTTTTTGATGAGGCAGAAAA+GGG - chr5_1:52460030-52460049 Msa0736330:five_prime_UTR 30.0%
TGTTTGGTTGAATTTCTTAC+CGG + chr5_1:52460087-52460106 None:intergenic 30.0%
!! ATTTGTTATGCTCTTATGTG+TGG - chr5_1:52460590-52460609 Msa0736330:intron 30.0%
TGGTAAAGAAAGTAACTTCT+TGG + chr5_1:52460912-52460931 None:intergenic 30.0%
!!! TGAGATAACTTTTTTGATGG+AGG + chr5_1:52460959-52460978 None:intergenic 30.0%
! TGGTAATGACAAACACAAAA+AGG - chr5_1:52461012-52461031 Msa0736330:five_prime_UTR 30.0%
AGATGACACAATGCAAAGTA+TGG - chr5_1:52456661-52456680 Msa0736330:three_prime_UTR 35.0%
! AACTTGATAACACAATCGTG+TGG - chr5_1:52456699-52456718 Msa0736330:three_prime_UTR 35.0%
! TTTGAAGCTTGACCAATGTA+TGG + chr5_1:52456734-52456753 None:intergenic 35.0%
AGAAGAGTGGAGAATTTAGT+GGG - chr5_1:52456869-52456888 Msa0736330:three_prime_UTR 35.0%
AGTGGGTCATATTATTCATG+AGG - chr5_1:52456886-52456905 Msa0736330:three_prime_UTR 35.0%
CATGGAGCAAAAACTAACAA+TGG + chr5_1:52456944-52456963 None:intergenic 35.0%
ACAACTTTGTTGGGTGTTAA+TGG + chr5_1:52457036-52457055 None:intergenic 35.0%
GCACAGAAAAACAACTTTGT+TGG + chr5_1:52457046-52457065 None:intergenic 35.0%
!! TTGCTACTTGCTCATTTTTG+TGG - chr5_1:52457085-52457104 Msa0736330:three_prime_UTR 35.0%
TTAGTACTCAGAAAGCTACA+CGG + chr5_1:52457123-52457142 None:intergenic 35.0%
TGCTGATGTTGTTGAAATTG+TGG - chr5_1:52457373-52457392 Msa0736330:three_prime_UTR 35.0%
!! TTAATCACAGTTAGCTTTGC+TGG - chr5_1:52457568-52457587 Msa0736330:CDS 35.0%
!! GGTTTGCTTGTGTTTTCAAT+TGG - chr5_1:52457644-52457663 Msa0736330:CDS 35.0%
GAAGTTAAGGTAAGCTAACA+AGG - chr5_1:52457729-52457748 Msa0736330:CDS 35.0%
GAAAGAATCGAGTATACCAT+TGG + chr5_1:52457846-52457865 None:intergenic 35.0%
ATGGTATACTCGATTCTTTC+GGG - chr5_1:52457846-52457865 Msa0736330:intron 35.0%
GATATTAAGTATGCGTGTGT+TGG - chr5_1:52457977-52457996 Msa0736330:intron 35.0%
AGTGAAGCATATGATAGATG+TGG - chr5_1:52458208-52458227 Msa0736330:CDS 35.0%
AGAGCTATTTGGGCAATATA+TGG - chr5_1:52458396-52458415 Msa0736330:intron 35.0%
CAATATATGGTGAGTGATCA+TGG - chr5_1:52458409-52458428 Msa0736330:intron 35.0%
TGTTTGACAAGTTCATCTAC+TGG - chr5_1:52458540-52458559 Msa0736330:intron 35.0%
AACTTGTAGCCAATTCCATT+TGG - chr5_1:52458712-52458731 Msa0736330:CDS 35.0%
!!! ATACTACTGCTTTTTCAGTG+TGG - chr5_1:52458876-52458895 Msa0736330:intron 35.0%
! GCTGTAATATGTGAAGCATT+AGG + chr5_1:52458932-52458951 None:intergenic 35.0%
ACATATTACAGCAACTGCAA+TGG - chr5_1:52458940-52458959 Msa0736330:intron 35.0%
ATCAATACCTGGATATCAAC+AGG + chr5_1:52459055-52459074 None:intergenic 35.0%
TCATTATATGTGGGGACAAA+AGG + chr5_1:52459194-52459213 None:intergenic 35.0%
! CCCCACATATAATGATTTTG+TGG - chr5_1:52459199-52459218 Msa0736330:intron 35.0%
ATCTGAGGAAAAAAAATGGC+GGG - chr5_1:52459298-52459317 Msa0736330:intron 35.0%
!! TGTTGGTTTAATGAGTGTTC+CGG - chr5_1:52459552-52459571 Msa0736330:CDS 35.0%
!! TAGCTGATTTGCAATTCCTA+AGG + chr5_1:52459638-52459657 None:intergenic 35.0%
!! AATGACCCTGCATTTGATTT+TGG - chr5_1:52459836-52459855 Msa0736330:CDS 35.0%
TGAAGCCAAAATCAAATGCA+GGG + chr5_1:52459844-52459863 None:intergenic 35.0%
ATGAAGCCAAAATCAAATGC+AGG + chr5_1:52459845-52459864 None:intergenic 35.0%
GTATCTACCACAAGATGAAT+TGG - chr5_1:52459912-52459931 Msa0736330:CDS 35.0%
!!! GTTTTTTGATGAGGCAGAAA+AGG - chr5_1:52460029-52460048 Msa0736330:five_prime_UTR 35.0%
! TGTGAAAAATTGGTGGCTTA+AGG - chr5_1:52460626-52460645 Msa0736330:intron 35.0%
!!! TGTAACACAAAAGGGTGTTT+TGG - chr5_1:52460783-52460802 Msa0736330:intron 35.0%
ATAGATCTAGCATATGCAAG+TGG + chr5_1:52460932-52460951 None:intergenic 35.0%
ACTTGCATATGCTAGATCTA+TGG - chr5_1:52460931-52460950 Msa0736330:five_prime_UTR 35.0%
TGGAACTCACAACCATACAT+TGG - chr5_1:52456719-52456738 Msa0736330:three_prime_UTR 40.0%
CACTAAATTCTCCACTCTTC+TGG + chr5_1:52456870-52456889 None:intergenic 40.0%
CAGAAGAGTGGAGAATTTAG+TGG - chr5_1:52456868-52456887 Msa0736330:three_prime_UTR 40.0%
TGAGCAAGTAGCAAGAAACA+AGG + chr5_1:52457079-52457098 None:intergenic 40.0%
!!! AGTTTTTGAGGTCTCAGCAA+TGG + chr5_1:52457413-52457432 None:intergenic 40.0%
!! AGTTAGCTTTGCTGGAAAAG+TGG - chr5_1:52457576-52457595 Msa0736330:CDS 40.0%
! TGGAAAAGTGGTGTTTTCCA+AGG - chr5_1:52457588-52457607 Msa0736330:CDS 40.0%
TGAGGAATAGGACGAAGTTA+AGG - chr5_1:52457716-52457735 Msa0736330:CDS 40.0%
GTTAAGGTAAGCTAACAAGG+AGG - chr5_1:52457732-52457751 Msa0736330:CDS 40.0%
ATCGAGTATACCATTGGAAC+AGG + chr5_1:52457840-52457859 None:intergenic 40.0%
TGGTATACTCGATTCTTTCG+GGG - chr5_1:52457847-52457866 Msa0736330:intron 40.0%
CGAGCACATTCGATAACAAA+GGG + chr5_1:52458033-52458052 None:intergenic 40.0%
TGAGCAGAAGGTTTATGATG+TGG - chr5_1:52458087-52458106 Msa0736330:CDS 40.0%
!! TTATGATGTGGTTCTGAAGC+AGG - chr5_1:52458099-52458118 Msa0736330:CDS 40.0%
!! AAACCGGAAATTGTTTTGCC+TGG - chr5_1:52458169-52458188 Msa0736330:CDS 40.0%
!! AACCGGAAATTGTTTTGCCT+GGG - chr5_1:52458170-52458189 Msa0736330:CDS 40.0%
TTCCCAGGCAAAACAATTTC+CGG + chr5_1:52458175-52458194 None:intergenic 40.0%
CTCAACAAACTCAAATTCCC+AGG + chr5_1:52458190-52458209 None:intergenic 40.0%
GGTGAGTGATCATGGTTATA+TGG - chr5_1:52458417-52458436 Msa0736330:intron 40.0%
TACTGGACAGTTTCTGCTAT+AGG - chr5_1:52458557-52458576 Msa0736330:intron 40.0%
GACGCATAACCAAATGGAAT+TGG + chr5_1:52458724-52458743 None:intergenic 40.0%
TTACAGCAACTGCAATGGAT+AGG - chr5_1:52458945-52458964 Msa0736330:intron 40.0%
! AGATTGGACGAACTTTTCCA+AGG - chr5_1:52458977-52458996 Msa0736330:intron 40.0%
! GATTGGACGAACTTTTCCAA+GGG - chr5_1:52458978-52458997 Msa0736330:intron 40.0%
GCAGCATCAAGCATATCAAA+TGG + chr5_1:52459007-52459026 None:intergenic 40.0%
CAGATTTCCTGTTGATATCC+AGG - chr5_1:52459045-52459064 Msa0736330:intron 40.0%
CTCTACTGTTACTATGTTGC+TGG - chr5_1:52459526-52459545 Msa0736330:CDS 40.0%
TACTATGTTGCTGGAACTGT+TGG - chr5_1:52459535-52459554 Msa0736330:CDS 40.0%
TTTAATGAGTGTTCCGGTCA+TGG - chr5_1:52459558-52459577 Msa0736330:CDS 40.0%
TTAATGAGTGTTCCGGTCAT+GGG - chr5_1:52459559-52459578 Msa0736330:CDS 40.0%
ATTGTACACACTCTCTGTTG+TGG + chr5_1:52459605-52459624 None:intergenic 40.0%
ATTTGCAATTCCTAAGGCCA+AGG + chr5_1:52459632-52459651 None:intergenic 40.0%
ACCAACATACTCAGAGATGT+TGG - chr5_1:52459658-52459677 Msa0736330:CDS 40.0%
TCCAACATCTCTGAGTATGT+TGG + chr5_1:52459662-52459681 None:intergenic 40.0%
! TCAATTTTCCTAACAGTGCC+AGG - chr5_1:52459878-52459897 Msa0736330:CDS 40.0%
TCAGATGACGACATATTTGC+CGG - chr5_1:52459949-52459968 Msa0736330:CDS 40.0%
!! ACGTTCTCGCCCTTTTAATT+TGG + chr5_1:52460011-52460030 None:intergenic 40.0%
GAAAACTTCAGCCACAAAGA+AGG + chr5_1:52460123-52460142 None:intergenic 40.0%
CTCCTCTGCTTGTGAAAAAT+TGG - chr5_1:52460616-52460635 Msa0736330:intron 40.0%
! CACCAATTTTTCACAAGCAG+AGG + chr5_1:52460621-52460640 None:intergenic 40.0%
CTCTGCTTGTGAAAAATTGG+TGG - chr5_1:52460619-52460638 Msa0736330:intron 40.0%
GATTTGAATTTCATCCCTCG+AGG - chr5_1:52460719-52460738 Msa0736330:intron 40.0%
GTTTGAACTTGTAACCTCGA+GGG + chr5_1:52460736-52460755 None:intergenic 40.0%
AGTTTGAACTTGTAACCTCG+AGG + chr5_1:52460737-52460756 None:intergenic 40.0%
ACAAGCAAACTCCAGAAGAG+TGG - chr5_1:52456856-52456875 Msa0736330:three_prime_UTR 45.0%
TTAGAGGTCTCCTGTTCCAA+TGG - chr5_1:52457827-52457846 Msa0736330:CDS 45.0%
TTACTAGCACTCTCTAAGCC+AGG + chr5_1:52458007-52458026 None:intergenic 45.0%
GCGAGCACATTCGATAACAA+AGG + chr5_1:52458034-52458053 None:intergenic 45.0%
! CGGTTTCACTTCAAGTTCAC+CGG + chr5_1:52458155-52458174 None:intergenic 45.0%
CGGTGAACTTGAAGTGAAAC+CGG - chr5_1:52458153-52458172 Msa0736330:CDS 45.0%
CTCTTCTAATGACTCCCGAA+AGG - chr5_1:52458370-52458389 Msa0736330:intron 45.0%
CAAATAGCTCTTCGCCTTTC+GGG + chr5_1:52458387-52458406 None:intergenic 45.0%
CCAAATAGCTCTTCGCCTTT+CGG + chr5_1:52458388-52458407 None:intergenic 45.0%
CGAAAGGCGAAGAGCTATTT+GGG - chr5_1:52458386-52458405 Msa0736330:intron 45.0%
CGGTATGACGCATAACCAAA+TGG + chr5_1:52458730-52458749 None:intergenic 45.0%
!!! CTGCTTTTTCAGTGTGGTGT+AGG - chr5_1:52458882-52458901 Msa0736330:intron 45.0%
!!! CTTTTTCAGTGTGGTGTAGG+AGG - chr5_1:52458885-52458904 Msa0736330:intron 45.0%
!! AGGACGGATGAACTTGTTGA+TGG - chr5_1:52458905-52458924 Msa0736330:intron 45.0%
AGCAACTGCAATGGATAGGT+GGG - chr5_1:52458949-52458968 Msa0736330:intron 45.0%
GGATAGGTGGGAATCAAGAT+TGG - chr5_1:52458961-52458980 Msa0736330:intron 45.0%
TCTACTTGAAAGGCAACGAG+TGG - chr5_1:52459129-52459148 Msa0736330:intron 45.0%
ATGTTCGCCTTCAGTGTTAG+AGG - chr5_1:52459395-52459414 Msa0736330:intron 45.0%
GATAGGTCCTCTAACACTGA+AGG + chr5_1:52459405-52459424 None:intergenic 45.0%
CATACTCAGAGATGTTGGAG+AGG - chr5_1:52459663-52459682 Msa0736330:CDS 45.0%
! ACCACAAGATGAATTGGCTC+TGG - chr5_1:52459918-52459937 Msa0736330:CDS 45.0%
!! AAGATGAATTGGCTCTGGCA+GGG - chr5_1:52459923-52459942 Msa0736330:CDS 45.0%
TGACGACATATTTGCCGGTA+AGG - chr5_1:52459954-52459973 Msa0736330:exon 45.0%
!!! GGCGAGAACGTTTTTTGATG+AGG - chr5_1:52460020-52460039 Msa0736330:five_prime_UTR 45.0%
AGCTCAATGAACAGAGCAGA+TGG - chr5_1:52460061-52460080 Msa0736330:five_prime_UTR 45.0%
!!! AAGGGTGTTTTGGATGTTGC+AGG - chr5_1:52460793-52460812 Msa0736330:intron 45.0%
!! TGTTTTGGATGTTGCAGGTG+TGG - chr5_1:52460798-52460817 Msa0736330:intron 45.0%
!! GTTTTGGATGTTGCAGGTGT+GGG - chr5_1:52460799-52460818 Msa0736330:intron 45.0%
!! AAAAATAAAAATAATTACAT+TGG + chr5_1:52457250-52457269 None:intergenic 5.0%
!!! TTTTTTATTTTTTTTTTTGA+AGG + chr5_1:52460319-52460338 None:intergenic 5.0%
TGCTTCCACTCCTAGCTTAG+AGG - chr5_1:52457811-52457830 Msa0736330:CDS 50.0%
GAACAGGAGACCTCTAAGCT+AGG + chr5_1:52457824-52457843 None:intergenic 50.0%
AGCAGGCGTCTTTGGTTAAG+AGG - chr5_1:52458116-52458135 Msa0736330:CDS 50.0%
AAGAGGAAGCTGAGCTCTAC+CGG - chr5_1:52458133-52458152 Msa0736330:CDS 50.0%
CCGAAAGGCGAAGAGCTATT+TGG - chr5_1:52458385-52458404 Msa0736330:intron 50.0%
TTCAGTGTGGTGTAGGAGGA+CGG - chr5_1:52458889-52458908 Msa0736330:intron 50.0%
CAGCAACTGCAATGGATAGG+TGG - chr5_1:52458948-52458967 Msa0736330:intron 50.0%
GCATATCAAATGGACGCCCT+TGG + chr5_1:52458997-52459016 None:intergenic 50.0%
AACTTTCCTGCAACCAGCCT+AGG - chr5_1:52459166-52459185 Msa0736330:intron 50.0%
TGTGGGGACAAAAGGAACCT+AGG + chr5_1:52459186-52459205 None:intergenic 50.0%
TGCGTTGAAATGCCCATGAC+CGG + chr5_1:52459574-52459593 None:intergenic 50.0%
GAGTGTGTACAATGCTGCCT+TGG - chr5_1:52459612-52459631 Msa0736330:CDS 50.0%
! TACAATGCTGCCTTGGCCTT+AGG - chr5_1:52459619-52459638 Msa0736330:CDS 50.0%
TAGATACACTCTTCCTCGCC+TGG + chr5_1:52459899-52459918 None:intergenic 50.0%
GCCAGAGCCAATTCATCTTG+TGG + chr5_1:52459922-52459941 None:intergenic 50.0%
!! CAAGATGAATTGGCTCTGGC+AGG - chr5_1:52459922-52459941 Msa0736330:CDS 50.0%
CCACTTGTCTGTCACCTTAC+CGG + chr5_1:52459971-52459990 None:intergenic 50.0%
GTAAGGTGACAGACAAGTGG+AGG - chr5_1:52459971-52459990 Msa0736330:five_prime_UTR 50.0%
TGAGGCAGAAAAGGGAGTGA+CGG - chr5_1:52460038-52460057 Msa0736330:five_prime_UTR 50.0%
CAATGAACAGAGCAGATGGC+CGG - chr5_1:52460065-52460084 Msa0736330:five_prime_UTR 50.0%
GGAGACCTCTAAGCTAGGAG+TGG + chr5_1:52457819-52457838 None:intergenic 55.0%
! TATGCGTGTGTTGGTCAGCC+TGG - chr5_1:52457986-52458005 Msa0736330:intron 55.0%
ACAGCCACTTCTCCTGCAGT+CGG + chr5_1:52458061-52458080 None:intergenic 55.0%
! GGCTGTTTCGTCTGAGCAGA+AGG - chr5_1:52458075-52458094 Msa0736330:CDS 55.0%
!! GGTTCTGAAGCAGGCGTCTT+TGG - chr5_1:52458108-52458127 Msa0736330:CDS 55.0%
! AAGGAACCTAGGCTGGTTGC+AGG + chr5_1:52459175-52459194 None:intergenic 55.0%
GGGACAAAAGGAACCTAGGC+TGG + chr5_1:52459182-52459201 None:intergenic 55.0%
TTTCCTAACAGTGCCAGGCG+AGG - chr5_1:52459883-52459902 Msa0736330:CDS 55.0%
CCGGTAAGGTGACAGACAAG+TGG - chr5_1:52459968-52459987 Msa0736330:exon 55.0%
GAACCCGACTGCAGGAGAAG+TGG - chr5_1:52458054-52458073 Msa0736330:intron 60.0%
CAGCCACTTCTCCTGCAGTC+GGG + chr5_1:52458060-52458079 None:intergenic 60.0%
CTTCCTCGCCTGGCACTGTT+AGG + chr5_1:52459889-52459908 None:intergenic 60.0%
GTGCTCGCGAACCCGACTGC+AGG - chr5_1:52458046-52458065 Msa0736330:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 52456646 52461110 52456646 ID=Msa0736330;Name=Msa0736330
chr5_1 mRNA 52456646 52461110 52456646 ID=Msa0736330-mRNA-1;Parent=Msa0736330;Name=Msa0736330-mRNA-1;_AED=0.12;_eAED=0.12;_QI=472|1|1|1|0.8|0.83|6|916|413
chr5_1 exon 52456646 52457862 52456646 ID=Msa0736330-mRNA-1:exon:14811;Parent=Msa0736330-mRNA-1
chr5_1 exon 52458070 52458305 52458070 ID=Msa0736330-mRNA-1:exon:14810;Parent=Msa0736330-mRNA-1
chr5_1 exon 52458690 52458862 52458690 ID=Msa0736330-mRNA-1:exon:14809;Parent=Msa0736330-mRNA-1
chr5_1 exon 52459339 52459389 52459339 ID=Msa0736330-mRNA-1:exon:14808;Parent=Msa0736330-mRNA-1
chr5_1 exon 52459488 52460178 52459488 ID=Msa0736330-mRNA-1:exon:14807;Parent=Msa0736330-mRNA-1
chr5_1 exon 52460849 52461110 52460849 ID=Msa0736330-mRNA-1:exon:14806;Parent=Msa0736330-mRNA-1
chr5_1 five_prime_UTR 52460849 52461110 52460849 ID=Msa0736330-mRNA-1:five_prime_utr;Parent=Msa0736330-mRNA-1
chr5_1 five_prime_UTR 52459969 52460178 52459969 ID=Msa0736330-mRNA-1:five_prime_utr;Parent=Msa0736330-mRNA-1
chr5_1 CDS 52459488 52459968 52459488 ID=Msa0736330-mRNA-1:cds;Parent=Msa0736330-mRNA-1
chr5_1 CDS 52459339 52459389 52459339 ID=Msa0736330-mRNA-1:cds;Parent=Msa0736330-mRNA-1
chr5_1 CDS 52458690 52458862 52458690 ID=Msa0736330-mRNA-1:cds;Parent=Msa0736330-mRNA-1
chr5_1 CDS 52458070 52458305 52458070 ID=Msa0736330-mRNA-1:cds;Parent=Msa0736330-mRNA-1
chr5_1 CDS 52457562 52457862 52457562 ID=Msa0736330-mRNA-1:cds;Parent=Msa0736330-mRNA-1
chr5_1 three_prime_UTR 52456646 52457561 52456646 ID=Msa0736330-mRNA-1:three_prime_utr;Parent=Msa0736330-mRNA-1
Gene Sequence

>Msa0736330

ATGTCTGTGACATTATTAAGGGTTGCTTCCACTCCTAGCTTAGAGGTCTCCTGTTCCAATGGTATACTCGATTCTTTCGGGGTTGTGAAGCTTGTAGATTCTTCGAAGTTCTTGTCTAGAGACTCTGTGTCAATAAGAGCAAAAAAGAATGATAAGAAAAAGACACGGAGATTTTGCTCATTGAGTACAGATATTAAGTATGCGTGTGTTGGTCAGCCTGGCTTAGAGAGTGCTAGTAACTTCCCTTTGTTATCGAATGTGCTCGCGAACCCGACTGCAGGAGAAGTGGCTGTTTCGTCTGAGCAGAAGGTTTATGATGTGGTTCTGAAGCAGGCGTCTTTGGTTAAGAGGAAGCTGAGCTCTACCGGTGAACTTGAAGTGAAACCGGAAATTGTTTTGCCTGGGAATTTGAGTTTGTTGAGTGAAGCATATGATAGATGTGGAGAAATTTGTGCAGAATATGCTAAAACATTTTACTTGGGAACTCTTCTAATGACTCCCGAAAGGCGAAGAGCTATTTGGGCAATATATGTGTGGTGTAGGAGGACGGATGAACTTGTTGATGGCCCTAATGCTTCACATATTACAGCAACTGCAATGGATAGGTGGGAATCAAGATTGGACGAACTTTTCCAAGGGCGTCCATTTGATATGCTTGATGCTGCTTTATCAGATACTGTCAACAGATTTCCTGTTGATATCCAGCCATTTAAAGATATGATAGAAGGAATGAGAATGGATCTGAAGAAGTCGAGATACAAAAGCTTTGATGAACTATATCTCTACTGTTACTATGTTGCTGGAACTGTTGGTTTAATGAGTGTTCCGGTCATGGGCATTTCAACGCATTCGCAAGCCACAACAGAGAGTGTGTACAATGCTGCCTTGGCCTTAGGAATTGCAAATCAGCTAACCAACATACTCAGAGATGTTGGAGAGGATGCCAGGCGAGGAAGAGTGTATCTACCACAAGATGAATTGGCTCTGGCAGGGCTTTCAGATGACGACATATTTGCCGGTAAGGTGACAGACAAGTGGAGGAACTTCATGAAGAGCCAAATTAAAAGGGCGAGAACGTTTTTTGATGAGGCAGAAAAGGGAGTGACGGAGCTCAATGAACAGAGCAGATGGCCGGTAAGAAATTCAACCAAACATCATTATACAAAACCTTCTTTGTGGCTGAAGTTTTCATTGTTTCGCAGTATATATGTAAGTGTGTATAGATGGAATGTCTTTGCATGA

Protein sequence

>Msa0736330

MSVTLLRVASTPSLEVSCSNGILDSFGVVKLVDSSKFLSRDSVSIRAKKNDKKKTRRFCSLSTDIKYACVGQPGLESASNFPLLSNVLANPTAGEVAVSSEQKVYDVVLKQASLVKRKLSSTGELEVKPEIVLPGNLSLLSEAYDRCGEICAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITATAMDRWESRLDELFQGRPFDMLDAALSDTVNRFPVDIQPFKDMIEGMRMDLKKSRYKSFDELYLYCYYVAGTVGLMSVPVMGISTHSQATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELALAGLSDDDIFAGKVTDKWRNFMKSQIKRARTFFDEAEKGVTELNEQSRWPVRNSTKHHYTKPSLWLKFSLFRSIYVSVYRWNVFA*