AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1357720


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1357720 MtrunA17_Chr7g0268621 84.350 377 10 3 1 328 1 377 0.0 625
Msa1357720 MtrunA17_Chr7g0268611 60.705 369 96 3 6 325 8 376 3.19e-155 440
Msa1357720 MtrunA17_Chr3g0125691 43.583 374 160 5 3 326 4 376 2.46e-101 303
Msa1357720 MtrunA17_Chr3g0125701 43.583 374 160 5 3 326 4 376 4.97e-101 302
Msa1357720 MtrunA17_Chr8g0350371 41.979 374 168 3 1 325 1 374 1.81e-100 301
Msa1357720 MtrunA17_Chr5g0412881 42.781 374 165 3 1 325 1 374 1.38e-99 298
Msa1357720 MtrunA17_Chr3g0125711 43.048 374 162 5 3 326 4 376 1.60e-99 299
Msa1357720 MtrunA17_Chr7g0262591 40.106 379 166 7 7 331 25 396 3.03e-89 273
Msa1357720 MtrunA17_Chr1g0182991 39.314 379 173 5 7 331 26 401 7.56e-89 272
Msa1357720 MtrunA17_Chr3g0139441 40.533 375 168 5 7 327 40 413 8.64e-89 272
Msa1357720 MtrunA17_Chr1g0169111 40.267 375 168 6 7 326 103 476 4.87e-86 268
Msa1357720 MtrunA17_Chr1g0148801 38.070 373 173 7 7 326 17 384 9.22e-86 264
Msa1357720 MtrunA17_Chr6g0485621 39.894 376 168 7 7 325 33 407 9.46e-85 262
Msa1357720 MtrunA17_Chr1g0147221 40.214 373 167 6 7 325 43 413 1.00e-84 262
Msa1357720 MtrunA17_Chr7g0262471 40.328 305 156 6 46 331 220 517 1.64e-69 226
Msa1357720 MtrunA17_Chr4g0025651 44.382 178 96 3 157 332 1 177 4.88e-47 157
Msa1357720 MtrunA17_Chr4g0025641 38.916 203 76 2 3 157 13 215 4.85e-36 130
Msa1357720 MtrunA17_Chr3g0129991 38.614 101 49 1 47 134 19 119 3.72e-15 70.9
Msa1357720 MtrunA17_Chr3g0130001 58.140 43 18 0 1 43 1 43 1.33e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1357720 AT1G48910.1 43.280 372 162 3 3 325 2 373 5.99e-106 315
Msa1357720 AT1G21430.1 41.176 374 166 5 6 328 9 379 7.44e-90 274
Msa1357720 AT1G04610.1 40.426 376 167 6 7 326 38 412 3.84e-87 269
Msa1357720 AT5G43890.1 38.442 385 178 6 7 333 26 409 8.48e-87 268
Msa1357720 AT1G04180.1 39.323 384 173 6 7 333 26 406 1.21e-86 267
Msa1357720 AT4G13260.1 39.142 373 172 6 7 325 29 400 6.39e-86 265
Msa1357720 AT4G28720.1 38.133 375 175 7 7 325 26 399 3.09e-84 261
Msa1357720 AT5G25620.1 38.933 375 170 7 7 325 33 404 1.94e-83 259
Msa1357720 AT5G25620.2 38.933 375 170 7 7 325 33 404 3.69e-83 258
Msa1357720 AT4G32540.1 36.898 374 176 5 7 326 22 389 7.94e-80 249
Msa1357720 AT4G32540.2 37.333 375 175 5 7 326 22 391 9.98e-80 249
Msa1357720 AT5G11320.1 37.265 373 174 6 7 326 18 383 1.61e-77 243
Msa1357720 AT2G33230.1 38.830 376 172 7 7 326 33 406 8.73e-76 239
Msa1357720 AT4G13260.3 39.863 291 155 5 54 325 8 297 9.67e-68 215
Msa1357720 AT5G11320.2 36.842 323 144 6 7 276 18 333 6.97e-62 201
Msa1357720 AT4G13260.2 38.652 282 120 4 7 235 29 310 6.45e-61 197

Find 177 sgRNAs with CRISPR-Local

Find 610 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAAGGGGCATGCTGAATT+TGG 0.136935 tig0016170:-10220 Msa1357720:three_prime_UTR
CTCTTCAACCCTTCAATTTC+AGG 0.149369 tig0016170:+11168 Msa1357720:intergenic
TCTAGGGATATGATGTATTA+TGG 0.157138 tig0016170:-16042 Msa1357720:CDS
GTTGTTGGTTCTGGTAATTC+TGG 0.206192 tig0016170:-17100 Msa1357720:CDS
GTACTTGACCTTCATATAAA+AGG 0.212639 tig0016170:+10080 Msa1357720:intergenic
TCAAGGGGCATGCTGAATTT+GGG 0.236398 tig0016170:-10219 Msa1357720:three_prime_UTR
TACGGAGATGTCACAAATTA+TGG 0.238324 tig0016170:-10126 Msa1357720:three_prime_UTR
GTTGTTGGGTCTGGAAATTC+TGG 0.242416 tig0016170:-11075 Msa1357720:three_prime_UTR
GTTGTTGGAGCAGGCCCTTC+TGG 0.254075 tig0016170:-11579 Msa1357720:three_prime_UTR
CATGTTCTTGTTGTTGGTTC+TGG 0.258207 tig0016170:-17109 Msa1357720:CDS
ACAGTTCCCACGTCAATTAT+AGG 0.258397 tig0016170:+15871 Msa1357720:intergenic
TCAAGAGATCAACTCATAAA+TGG 0.262238 tig0016170:-15402 Msa1357720:CDS
GATGGTGATGCTTAGTAAAA+TGG 0.287383 tig0016170:-10151 Msa1357720:three_prime_UTR
GGTGAAGTTGAGGAGTATTC+TGG 0.306966 tig0016170:-17262 Msa1357720:CDS
TTCTTTCCCTTCCAATGAAC+GGG 0.317788 tig0016170:+7683 Msa1357720:intergenic
TCAACAGCTCTGTTGTATAT+AGG 0.326418 tig0016170:+17346 Msa1357720:intergenic
GGAGTATTCTGGAAGATTCT+TGG 0.331314 tig0016170:-17251 Msa1357720:CDS
TCTCTTTCGAGGATTGTATA+AGG 0.332947 tig0016170:+11519 Msa1357720:intergenic
TATGGAGATTGCTTTAGATT+TGG 0.339070 tig0016170:-17077 Msa1357720:CDS
CTAGGGATATGATGTATTAT+GGG 0.339983 tig0016170:-16041 Msa1357720:CDS
GAAGGTGAAGGCTATGAATA+AGG 0.342960 tig0016170:-11265 Msa1357720:three_prime_UTR
CATGTTCTTGTTGTTGGGTC+TGG 0.344499 tig0016170:-11084 Msa1357720:three_prime_UTR
CTTGCCATACTTCATCTTCA+TGG 0.350512 tig0016170:+15897 Msa1357720:intergenic
AAGTATAAGCTTCAAACATA+TGG 0.353044 tig0016170:-7418 Msa1357720:three_prime_UTR
AATTAAGTCTCAAGAGTTAA+AGG 0.356302 tig0016170:-10019 Msa1357720:intron
GATGAGCATGTTCTTGTTGT+TGG 0.358206 tig0016170:-17115 Msa1357720:CDS
CAACAGCTCTGTTGTATATA+GGG 0.358349 tig0016170:+17347 Msa1357720:intergenic
AATGAAAGAGTGATAGTTGT+TGG 0.360593 tig0016170:-11594 Msa1357720:three_prime_UTR
CATTCAACTGGGTTTAAGAA+TGG 0.361675 tig0016170:-11126 Msa1357720:three_prime_UTR
AGCCAAGTTACCCCGTTCAT+TGG 0.371507 tig0016170:-7694 Msa1357720:three_prime_UTR
GATGAACATGTTCTTGTTGT+TGG 0.376175 tig0016170:-11090 Msa1357720:three_prime_UTR
ATGCTTAGTAAAATGGTTTA+CGG 0.376808 tig0016170:-10144 Msa1357720:three_prime_UTR
AAGCGCAAGTATAAATATAT+AGG 0.381462 tig0016170:+11728 Msa1357720:intergenic
ATCTACCCACGAATGGCTTA+AGG 0.386980 tig0016170:-8666 Msa1357720:intron
GCTTTAGATTTGGCTAACTT+TGG 0.396250 tig0016170:-17067 Msa1357720:CDS
GGGAAAGTGATTCATTCAAC+TGG 0.397373 tig0016170:-11138 Msa1357720:three_prime_UTR
ATGATGAAGGTTCTGAGAAA+TGG 0.397382 tig0016170:-11287 Msa1357720:three_prime_UTR
CCTTCAATTTCAGGTACAAA+AGG 0.400011 tig0016170:+11177 Msa1357720:intergenic
CTATCAAGGAGAGGTTTCTA+TGG 0.400558 tig0016170:-7641 Msa1357720:three_prime_UTR
AAGGTTCCAACGTCAATAAT+AGG 0.403973 tig0016170:+10048 Msa1357720:intergenic
ACTGTCAAGAAAATCAAATC+TGG 0.404277 tig0016170:-15853 Msa1357720:CDS
ATATATATATACACAATAGA+TGG 0.406133 tig0016170:-11658 Msa1357720:three_prime_UTR
GAAACCAGTGCAGAAAATAA+TGG 0.408371 tig0016170:+15423 Msa1357720:intergenic
ATTCAACTGGGTTTAAGAAT+GGG 0.409379 tig0016170:-11125 Msa1357720:three_prime_UTR
CAGAAAATAATGGAGTCAAA+TGG 0.413696 tig0016170:+15433 Msa1357720:intergenic
CGAGTTTCTCTAACCTCAAC+TGG 0.413737 tig0016170:+7488 Msa1357720:intergenic
TTCACCATGAAGATGAAGTA+TGG 0.415407 tig0016170:-15901 Msa1357720:CDS
TTCCAATGAACGGGGTAACT+TGG 0.418492 tig0016170:+7692 Msa1357720:intergenic
AGTATAAGCTTCAAACATAT+GGG 0.421207 tig0016170:-7417 Msa1357720:three_prime_UTR
ATCAACTCATAAATGGCTTA+AGG 0.422879 tig0016170:-15395 Msa1357720:intron
AAAGCTGAGAATAAGAGTTC+TGG 0.427642 tig0016170:-17283 Msa1357720:CDS
CAAGGGGCATGCTGAATTTG+GGG 0.432338 tig0016170:-10218 Msa1357720:three_prime_UTR
AATCAAATCTGGAGAAATAC+AGG 0.435570 tig0016170:-15842 Msa1357720:intron
TATATTGTGTTGGACTATCA+AGG 0.438069 tig0016170:-7655 Msa1357720:three_prime_UTR
TTCTGGAATGGAAATTGCAT+TGG 0.445243 tig0016170:-11058 Msa1357720:three_prime_UTR
CATATAAAAGGGACCCTCGC+TGG 0.449889 tig0016170:+10092 Msa1357720:intergenic
TATGGAGATCTGAGCAAATA+TGG 0.453306 tig0016170:-15949 Msa1357720:CDS
ACTTCATCTTCATGGTGAAC+GGG 0.456709 tig0016170:+15905 Msa1357720:intergenic
GAAGCACCGGTGATAATAAT+CGG 0.458478 tig0016170:-17619 Msa1357720:CDS
AAGGCTATGAATAAGGATTC+CGG 0.459058 tig0016170:-11258 Msa1357720:three_prime_UTR
AGAAAATAATGGAGTCAAAT+GGG 0.459670 tig0016170:+15434 Msa1357720:intergenic
TGGTATGGTAAACCAGGCTT+TGG 0.460923 tig0016170:+15183 Msa1357720:intergenic
ATAATCGGAGCTGGAACATC+CGG 0.461025 tig0016170:-17604 Msa1357720:CDS
AGTTGAATGAATCACTTTCC+CGG 0.461841 tig0016170:+11140 Msa1357720:intergenic
AAGAATGGTTTATATTGTGT+TGG 0.465566 tig0016170:-7665 Msa1357720:three_prime_UTR
TAAGGATTCCGGTGAGGTTG+AGG 0.466347 tig0016170:-11247 Msa1357720:three_prime_UTR
GCAAGCTGCTGTGGCTAGGC+CGG 0.467225 tig0016170:+17585 Msa1357720:intergenic
ATGAACATGTTCTTGTTGTT+GGG 0.471420 tig0016170:-11089 Msa1357720:three_prime_UTR
TACTTGACCTTCATATAAAA+GGG 0.473078 tig0016170:+10081 Msa1357720:intergenic
TGGTTCTGGTAATTCTGGTA+TGG 0.475788 tig0016170:-17095 Msa1357720:CDS
ATGAACGGGGTAACTTGGCT+TGG 0.476005 tig0016170:+7697 Msa1357720:intergenic
ATGTTGATGATGATGAGAAA+TGG 0.476343 tig0016170:-17312 Msa1357720:CDS
CTTACGCATTCTATTTCTGC+TGG 0.477420 tig0016170:+8764 Msa1357720:intergenic
CTGCGTTGGGTTGTCAAGGA+GGG 0.478723 tig0016170:-15136 Msa1357720:CDS
CCTCGTGTACCTGAGGTTGA+AGG 0.480789 tig0016170:-17202 Msa1357720:CDS
TTCGAGGATTGTATAAGGAA+TGG 0.481468 tig0016170:+11524 Msa1357720:intergenic
TTCAATCATTGTTAGAAGCC+CGG 0.486770 tig0016170:-17035 Msa1357720:intron
TTCTTACCCTTCCAATGGTA+TGG 0.487301 tig0016170:+15168 Msa1357720:intergenic
TAAGAGTTCTGGTGAAGTTG+AGG 0.487568 tig0016170:-17272 Msa1357720:CDS
TTCCATCACGGAACAACACT+TGG 0.488765 tig0016170:+15464 Msa1357720:intergenic
TTCGAGAATGATGAAAGGTA+TGG 0.490300 tig0016170:+17549 Msa1357720:intergenic
TTAAGCAAGCTGCTGTGGCT+AGG 0.491228 tig0016170:+17581 Msa1357720:intergenic
GGGCTTCTAACAATGATTGA+AGG 0.491991 tig0016170:+17037 Msa1357720:intergenic
GAATACCATCATCATTCAAA+AGG 0.492685 tig0016170:+7720 Msa1357720:intergenic
ACTAGTTTCTCCACCGTGCT+TGG 0.493688 tig0016170:+15994 Msa1357720:intergenic
TGAACGGGGTAACTTGGCTT+GGG 0.498594 tig0016170:+7698 Msa1357720:intergenic
CTCTCCAACCCTTCAACCTC+AGG 0.498735 tig0016170:+17193 Msa1357720:intergenic
TTCATATTCCTCAACCTCAC+CGG 0.503302 tig0016170:+11239 Msa1357720:intergenic
TGCGTTGGGTTGTCAAGGAG+GGG 0.503567 tig0016170:-15135 Msa1357720:CDS
TTCAATCGTTGTTCGAAGCA+AGG 0.504367 tig0016170:-11010 Msa1357720:intron
CTTATGCTCTCTATTTCTGC+TGG 0.510758 tig0016170:+15493 Msa1357720:intergenic
GCAGAAATAGAGAGCATAAG+TGG 0.510770 tig0016170:-15490 Msa1357720:CDS
TCTGATGAAGTATTTGTCAA+TGG 0.510851 tig0016170:-10190 Msa1357720:three_prime_UTR
GTTCATTGGAAGGGAAAGAA+TGG 0.512169 tig0016170:-7680 Msa1357720:three_prime_UTR
TCCAAACCTTAAGCCATTCG+TGG 0.514918 tig0016170:+8660 Msa1357720:intergenic
GATGTCACAAATTATGGAGT+TGG 0.515768 tig0016170:-10120 Msa1357720:three_prime_UTR
ATATAAAAGGGACCCTCGCT+GGG 0.519555 tig0016170:+10093 Msa1357720:intergenic
AGCAAATGATATTGCTATGC+TGG 0.521351 tig0016170:-15079 Msa1357720:intron
TACTTCATCTTCATGGTGAA+CGG 0.522181 tig0016170:+15904 Msa1357720:intergenic
ATAGCAAGCAGGATTGTGTA+TGG 0.524380 tig0016170:-15967 Msa1357720:CDS
AACGGGCCTTCACTAGGAAA+AGG 0.524492 tig0016170:+15922 Msa1357720:intergenic
AGCCTGGTTTACCATACCAT+TGG 0.525475 tig0016170:-15179 Msa1357720:CDS
CTTCAATTTCAGGTACAAAA+GGG 0.526666 tig0016170:+11178 Msa1357720:intergenic
AAGTTACCCCGTTCATTGGA+AGG 0.527259 tig0016170:-7690 Msa1357720:three_prime_UTR
AGGAGAGGTTTCTATGGAGC+TGG 0.527357 tig0016170:-7635 Msa1357720:three_prime_UTR
GGAATGTATGATGGAAAAGA+AGG 0.532095 tig0016170:+11399 Msa1357720:intergenic
ATTCTTTCCCTTCCAATGAA+CGG 0.533011 tig0016170:+7682 Msa1357720:intergenic
AGATTCTTGGTTGTTGCTAG+TGG 0.534441 tig0016170:-17238 Msa1357720:CDS
TTTACTGCGTTGGGTTGTCA+AGG 0.536045 tig0016170:-15140 Msa1357720:CDS
GCAGAAATAGAATGCGTAAG+TGG 0.548916 tig0016170:-8761 Msa1357720:three_prime_UTR
ATGGTGAACGGGCCTTCACT+AGG 0.550940 tig0016170:+15916 Msa1357720:intergenic
AGGTTGAGGAATATGAAGGA+AGG 0.551335 tig0016170:-11233 Msa1357720:three_prime_UTR
ATGTATGATGGAAAAGAAGG+TGG 0.552215 tig0016170:+11402 Msa1357720:intergenic
AATAAGCACTAGTAACAAAA+CGG 0.553856 tig0016170:-11759 Msa1357720:exon
GATGGAAAAGAAGGTGGGAA+TGG 0.556044 tig0016170:+11408 Msa1357720:intergenic
TAAAATAAAGATCAAAGGAG+AGG 0.557282 tig0016170:-7456 Msa1357720:three_prime_UTR
GGATTGTATAAGGAATGGAT+TGG 0.560650 tig0016170:+11529 Msa1357720:intergenic
AACCGTTCTTACCCTTCCAA+TGG 0.562914 tig0016170:+15163 Msa1357720:intergenic
TGGTTTACCATACCATTGGA+AGG 0.564287 tig0016170:-15175 Msa1357720:CDS
AACTAGTGGTGATAGCAAGC+AGG 0.566788 tig0016170:-15978 Msa1357720:CDS
AGAGTGATAGTTGTTGGAGC+AGG 0.568437 tig0016170:-11588 Msa1357720:three_prime_UTR
CTCGTGTACCTGAGGTTGAA+GGG 0.572413 tig0016170:-17201 Msa1357720:intron
CAAGTTTCCTATAATTGACG+TGG 0.574376 tig0016170:-15878 Msa1357720:CDS
TAACAGAATGCATGAAGCAC+CGG 0.575824 tig0016170:-17632 Msa1357720:intron
TAGGGATATGATGTATTATG+GGG 0.576351 tig0016170:-16040 Msa1357720:CDS
CCGGTGATAATAATCGGAGC+TGG 0.577061 tig0016170:-17613 Msa1357720:CDS
ACTGCGTTGGGTTGTCAAGG+AGG 0.577065 tig0016170:-15137 Msa1357720:CDS
GAGAATGCAGAGTATGATGA+AGG 0.578252 tig0016170:-11300 Msa1357720:three_prime_UTR
CGTTGATTAGATGCCAGTTG+AGG 0.578457 tig0016170:-7501 Msa1357720:three_prime_UTR
AACCAAGTGTTGTTCCGTGA+TGG 0.578671 tig0016170:-15466 Msa1357720:CDS
GTATTTGTCAATGGAGATGG+TGG 0.579490 tig0016170:-10181 Msa1357720:three_prime_UTR
TAACTATCTGTCACCAAGCA+CGG 0.580671 tig0016170:-16007 Msa1357720:CDS
CCAGCTCCGATTATTATCAC+CGG 0.581468 tig0016170:+17613 Msa1357720:intergenic
AATAATGGAGTCAAATGGGT+AGG 0.582608 tig0016170:+15438 Msa1357720:intergenic
CCAAACCTTAAGCCATTCGT+GGG 0.583156 tig0016170:+8661 Msa1357720:intergenic
GGAAAGTGATTCATTCAACT+GGG 0.587347 tig0016170:-11137 Msa1357720:three_prime_UTR
TTCCAATGGTATGGTAAACC+AGG 0.588965 tig0016170:+15177 Msa1357720:intergenic
ATTTATAAAATAAAGATCAA+AGG 0.590359 tig0016170:-7461 Msa1357720:three_prime_UTR
GTGGGTAGATCTCTTGAAGC+CGG 0.592441 tig0016170:+8679 Msa1357720:intergenic
TGTATGATGGAAAAGAAGGT+GGG 0.596307 tig0016170:+11403 Msa1357720:intergenic
GAAGTATTTGTCAATGGAGA+TGG 0.597497 tig0016170:-10184 Msa1357720:three_prime_UTR
TGGGTCTGGAAATTCTGGAA+TGG 0.600936 tig0016170:-11070 Msa1357720:three_prime_UTR
AGTTACCCCGTTCATTGGAA+GGG 0.602710 tig0016170:-7689 Msa1357720:three_prime_UTR
GCTGCTACTGAGAGACCAGA+AGG 0.602816 tig0016170:+11564 Msa1357720:intergenic
GAAGGTGGGAATGGTTTGTG+AGG 0.606122 tig0016170:+11417 Msa1357720:intergenic
TCAACGATAACGACGATATG+CGG 0.608058 tig0016170:+7518 Msa1357720:intergenic
GGTGAGGTTGAGGAATATGA+AGG 0.608479 tig0016170:-11237 Msa1357720:three_prime_UTR
AGCTGAACCTCGTGTACCTG+AGG 0.611922 tig0016170:-17209 Msa1357720:CDS
TGTGTTGGACTATCAAGGAG+AGG 0.616154 tig0016170:-7650 Msa1357720:three_prime_UTR
TCACAAATTATGGAGTTGGT+AGG 0.617407 tig0016170:-10116 Msa1357720:three_prime_UTR
TCCACTGTTCTGTGATACAG+AGG 0.617971 tig0016170:+11321 Msa1357720:intergenic
AGGTTTCTATGGAGCTGGTG+CGG 0.619956 tig0016170:-7630 Msa1357720:three_prime_UTR
GGAGATGGTGGATTCAATGA+TGG 0.623038 tig0016170:-10169 Msa1357720:three_prime_UTR
TTCTGAGAAATGGAAGGTGA+AGG 0.623363 tig0016170:-11277 Msa1357720:three_prime_UTR
TCAAGAGATCTACCCACGAA+TGG 0.627837 tig0016170:-8673 Msa1357720:three_prime_UTR
TCTCTTTCGAGAATGATGAA+AGG 0.630107 tig0016170:+17544 Msa1357720:intergenic
GGTTTACCATACCATTGGAA+GGG 0.632374 tig0016170:-15174 Msa1357720:CDS
TTGATGATGATGAGAAATGG+AGG 0.634704 tig0016170:-17309 Msa1357720:CDS
GCATTGGATCTTATCAACCA+TGG 0.635858 tig0016170:-11042 Msa1357720:three_prime_UTR
GGAGTTGGTAGGCCCAGCGA+GGG 0.635996 tig0016170:-10105 Msa1357720:three_prime_UTR
TACCATTGGAAGGGTAAGAA+CGG 0.636293 tig0016170:-15165 Msa1357720:CDS
AAGTATCCTATTATTGACGT+TGG 0.642218 tig0016170:-10054 Msa1357720:three_prime_UTR
ATGAAGATGAACACGATCGT+AGG 0.646942 tig0016170:+17489 Msa1357720:intergenic
CTGCTACTGAGAGACCAGAA+GGG 0.656151 tig0016170:+11565 Msa1357720:intergenic
GTATAAGCTTCAAACATATG+GGG 0.660534 tig0016170:-7416 Msa1357720:three_prime_UTR
AAGTTTCCTATAATTGACGT+GGG 0.672849 tig0016170:-15877 Msa1357720:CDS
ATATATGGCTATTATAGACA+AGG 0.673233 tig0016170:+11681 Msa1357720:intergenic
CCTTCAACCTCAGGTACACG+AGG 0.674313 tig0016170:+17202 Msa1357720:intergenic
TCTTTCCCTTCCAATGAACG+GGG 0.676011 tig0016170:+7684 Msa1357720:intergenic
TGGAGTTGGTAGGCCCAGCG+AGG 0.683293 tig0016170:-10106 Msa1357720:three_prime_UTR
TGAAGGTTCTGAGAAATGGA+AGG 0.688803 tig0016170:-11283 Msa1357720:three_prime_UTR
TCCTCTGTATCACAGAACAG+TGG 0.693621 tig0016170:-11322 Msa1357720:three_prime_UTR
AGGGATATGATGTATTATGG+GGG 0.700343 tig0016170:-16039 Msa1357720:CDS
TGATGATGATGAGAAATGGA+GGG 0.722234 tig0016170:-17308 Msa1357720:CDS
TATGAATAAGGATTCCGGTG+AGG 0.731006 tig0016170:-11253 Msa1357720:three_prime_UTR
CTATCTGTCACCAAGCACGG+TGG 0.746358 tig0016170:-16004 Msa1357720:CDS
AAGCACGGTGGAGAAACTAG+TGG 0.756921 tig0016170:-15992 Msa1357720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTATTTTGTATATATGT+AGG - tig0016170:9877-9896 Msa1357720:intron 10.0%
!!! CATAATTTTATTGATAATTT+AGG - tig0016170:10500-10519 Msa1357720:intron 10.0%
!!! AAAAAATAATTTAGTTTGTT+TGG - tig0016170:10695-10714 Msa1357720:intron 10.0%
!!! AAAAAATAGATTTTTTTTAG+AGG + tig0016170:10790-10809 Msa1357720:intergenic 10.0%
!!! TTTTTGCTTATATTTTATTT+TGG - tig0016170:11455-11474 Msa1357720:three_prime_UTR 10.0%
!! TATTAATTAATTCAATAGAA+AGG - tig0016170:11746-11765 Msa1357720:three_prime_UTR 10.0%
!!! AATTAAAAAGTTTTTTTTGA+AGG + tig0016170:12022-12041 Msa1357720:intergenic 10.0%
!! CAATAAAAAATAATCATAAA+AGG + tig0016170:12108-12127 Msa1357720:intergenic 10.0%
!!! AATTTTTTTTATGGTTTTTT+AGG + tig0016170:13007-13026 Msa1357720:intergenic 10.0%
!!! AGTTTTTTTTTTTTTTTTGA+GGG + tig0016170:13136-13155 Msa1357720:intergenic 10.0%
!!! AAGTTTTTTTTTTTTTTTTG+AGG + tig0016170:13137-13156 Msa1357720:intergenic 10.0%
!! TTATTATTAAAGAAATGATA+GGG + tig0016170:13244-13263 Msa1357720:intergenic 10.0%
!! TTTATTATTAAAGAAATGAT+AGG + tig0016170:13245-13264 Msa1357720:intergenic 10.0%
!! TGTGTATATATATATATATA+TGG + tig0016170:13735-13754 Msa1357720:intergenic 10.0%
!! TAGAATAAATATATAAATGA+CGG - tig0016170:14931-14950 Msa1357720:intron 10.0%
!! AGATATAATTAACAAAAATA+TGG + tig0016170:17099-17118 Msa1357720:intergenic 10.0%
!!! TATAAGTAAAATTTTTTTGT+AGG - tig0016170:17292-17311 Msa1357720:CDS 10.0%
!!! ATAAGTAAAATTTTTTTGTA+GGG - tig0016170:17293-17312 Msa1357720:CDS 10.0%
!!! CTTAAAATAAAATATGTTTT+TGG + tig0016170:17380-17399 Msa1357720:intergenic 10.0%
!!! TATTTTATTTTAAGAGTTTA+AGG - tig0016170:17386-17405 Msa1357720:intron 10.0%
!!! TATAAGTAAAAATTTTTTGT+AGG - tig0016170:17446-17465 Msa1357720:intron 10.0%
!!! ATAAGTAAAAATTTTTTGTA+GGG - tig0016170:17447-17466 Msa1357720:intron 10.0%
!!! TAATTAATTATTTTTTGGTA+GGG - tig0016170:17646-17665 Msa1357720:intron 10.0%
!! ATTTATAAAATAAAGATCAA+AGG - tig0016170:17937-17956 Msa1357720:intron 10.0%
!! AAAAATAGAGAATTATCAAT+TGG - tig0016170:7372-7391 Msa1357720:three_prime_UTR 15.0%
!! AAAATAGAGAATTATCAATT+GGG - tig0016170:7373-7392 Msa1357720:three_prime_UTR 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + tig0016170:7549-7568 Msa1357720:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + tig0016170:7550-7569 Msa1357720:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + tig0016170:7614-7633 Msa1357720:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + tig0016170:7615-7634 Msa1357720:intergenic 15.0%
!!! TAATTTTTATTTTTGCTAGT+TGG - tig0016170:8851-8870 Msa1357720:intron 15.0%
!!! TCATTTGAGTTTTTTTTTAT+TGG + tig0016170:9238-9257 Msa1357720:intergenic 15.0%
!!! TTATTTTAATACGTAACAAA+CGG + tig0016170:10571-10590 Msa1357720:intergenic 15.0%
!!! TTTTAATATTCATGTTGTAT+AGG + tig0016170:11026-11045 Msa1357720:intergenic 15.0%
!!! AACATTTTTAAAACATGAAA+AGG + tig0016170:11531-11550 Msa1357720:intergenic 15.0%
!! TGAACAATAAAAAACTTAAA+AGG + tig0016170:11693-11712 Msa1357720:intergenic 15.0%
!!! AATACACTTTAAAATTTGAA+AGG + tig0016170:11730-11749 Msa1357720:intergenic 15.0%
!!! GTTTTTTTTTTTTTTTTGAG+GGG + tig0016170:13135-13154 Msa1357720:intergenic 15.0%
!!! TACTTTATAAAAGTATTGTA+AGG - tig0016170:13350-13369 Msa1357720:intron 15.0%
!!! ACTTTATAAAAGTATTGTAA+GGG - tig0016170:13351-13370 Msa1357720:intron 15.0%
!! TGCTTAAAAATAATTTGATA+TGG + tig0016170:13564-13583 Msa1357720:intergenic 15.0%
!! TTATCATTTATTCATTTCAA+TGG - tig0016170:13590-13609 Msa1357720:intron 15.0%
!! ATATATATATACACAATAGA+TGG - tig0016170:13740-13759 Msa1357720:intron 15.0%
!!! TATTGTAAAAACTTTTGTTT+AGG + tig0016170:14023-14042 Msa1357720:intergenic 15.0%
!! AAAACAAAACAAAAAACATT+TGG + tig0016170:14492-14511 Msa1357720:intergenic 15.0%
!! AGAATAAATATATAAATGAC+GGG - tig0016170:14932-14951 Msa1357720:intron 15.0%
!! ATGTATTCAAGTATAATTTA+AGG + tig0016170:15566-15585 Msa1357720:intergenic 15.0%
!! AAAATAAAGGATTAAATTGA+TGG - tig0016170:15607-15626 Msa1357720:intron 15.0%
!!! AAAATCTTCTGTTTTATTTA+AGG - tig0016170:15852-15871 Msa1357720:CDS 15.0%
!!! AAAATCTTCTGTTTTATTTA+AGG - tig0016170:15852-15871 Msa1357720:CDS 15.0%
!! GATATGAGAAATATAAATTA+AGG + tig0016170:16166-16185 Msa1357720:intergenic 15.0%
!! ATTTCTCATATCATTAAATA+AGG - tig0016170:16174-16193 Msa1357720:intron 15.0%
!! TTTCTCATATCATTAAATAA+GGG - tig0016170:16175-16194 Msa1357720:intron 15.0%
!! AACAAATTTATTTAAGTGAA+AGG - tig0016170:16309-16328 Msa1357720:intron 15.0%
!!! CTTTTTTTTTTTTGAAAGAA+AGG - tig0016170:16340-16359 Msa1357720:intron 15.0%
!!! TTTTAAGACTCTTTATTTTA+AGG - tig0016170:16840-16859 Msa1357720:intron 15.0%
!!! TTTAAGACTCTTTATTTTAA+GGG - tig0016170:16841-16860 Msa1357720:intron 15.0%
!! AAAGCTATTAAAATTAAGTA+AGG + tig0016170:17322-17341 Msa1357720:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG + tig0016170:16987-17006 Msa1357720:intergenic 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG + tig0016170:17064-17083 Msa1357720:intergenic 15.0%
!!! TTAAAAACTTTAAGAGTTTA+AGG - tig0016170:17232-17251 Msa1357720:CDS 15.0%
!! AAAGCTATTAAAATTAAGTA+AGG - tig0016170:17322-17341 Msa1357720:CDS 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG - tig0016170:17260-17279 Msa1357720:CDS 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG - tig0016170:17261-17280 Msa1357720:CDS 15.0%
!! AAAGCTATTAAAATTAAGTA+AGG - tig0016170:17322-17341 Msa1357720:CDS 15.0%
!!! ATAAGGGTAAAATATATTTT+TGG + tig0016170:17534-17553 Msa1357720:intergenic 15.0%
!! TGCAACATATATTAAAATAA+GGG + tig0016170:17550-17569 Msa1357720:intergenic 15.0%
!! ATGCAACATATATTAAAATA+AGG + tig0016170:17551-17570 Msa1357720:intergenic 15.0%
!!! CTAATTAATTATTTTTTGGT+AGG - tig0016170:17645-17664 Msa1357720:intron 15.0%
!!! AATTAATTATTTTTTGGTAG+GGG - tig0016170:17647-17666 Msa1357720:intron 15.0%
!! ATTAAAAAGTGAATAAATTG+TGG + tig0016170:18064-18083 Msa1357720:intergenic 15.0%
!!! ACATATATCAATTTTTTTGA+CGG + tig0016170:18101-18120 Msa1357720:intergenic 15.0%
!!! GTCGTTTTTTCATATTTTTT+TGG - tig0016170:7295-7314 Msa1357720:three_prime_UTR 20.0%
!!! TTTCATATTTTTTTGGTAGT+TGG - tig0016170:7302-7321 Msa1357720:three_prime_UTR 20.0%
!!! TGATAATTCTCTATTTTTTG+TGG + tig0016170:7370-7389 Msa1357720:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + tig0016170:7480-7499 Msa1357720:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + tig0016170:7516-7535 Msa1357720:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + tig0016170:7517-7536 Msa1357720:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + tig0016170:7590-7609 Msa1357720:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + tig0016170:7613-7632 Msa1357720:intergenic 20.0%
!!! TATTCTATGAACTGTTTTTT+GGG + tig0016170:7998-8017 Msa1357720:intergenic 20.0%
!!! ATATTCTATGAACTGTTTTT+TGG + tig0016170:7999-8018 Msa1357720:intergenic 20.0%
!! AAACAGTTCATAGAATATTT+AGG - tig0016170:8001-8020 Msa1357720:intron 20.0%
!!! ACATAGAATTTTGTTAATAC+CGG + tig0016170:8385-8404 Msa1357720:intergenic 20.0%
!! TCAAAATTCAACTATGAAAA+TGG - tig0016170:8554-8573 Msa1357720:intron 20.0%
!!! TTTGATAGTTGATTTAAGAT+AGG + tig0016170:8598-8617 Msa1357720:intergenic 20.0%
!! ATATTTGCTTCTTAAAATCA+CGG - tig0016170:9093-9112 Msa1357720:intron 20.0%
!!! TTTTTTTTATTGGTCACTTA+GGG + tig0016170:9228-9247 Msa1357720:intergenic 20.0%
!!! TTTTTTTTTATTGGTCACTT+AGG + tig0016170:9229-9248 Msa1357720:intergenic 20.0%
!!! TAAGTAGATAAATTGCATTT+TGG + tig0016170:9290-9309 Msa1357720:intergenic 20.0%
!! CATTTGTTTATTAACAATAC+AGG - tig0016170:9596-9615 Msa1357720:intron 20.0%
!! TAATGTTATTAACACTAAAC+AGG - tig0016170:9620-9639 Msa1357720:intron 20.0%
!! GATTCTTAAACCTTAATTTA+TGG + tig0016170:10452-10471 Msa1357720:intergenic 20.0%
!!! TATTTTAATACGTAACAAAC+GGG + tig0016170:10570-10589 Msa1357720:intergenic 20.0%
!! CTAAAAAAAGCTATAACAAA+CGG - tig0016170:10946-10965 Msa1357720:intron 20.0%
!! TAAAAAAAGCTATAACAAAC+GGG - tig0016170:10947-10966 Msa1357720:intron 20.0%
!! AAAAAAAAAGAAGAAGAAGA+AGG + tig0016170:10986-11005 Msa1357720:intergenic 20.0%
!! ACAATACATTGTAATATGTA+GGG - tig0016170:11199-11218 Msa1357720:three_prime_UTR 20.0%
!! TTGTTTATATTTCATTCATG+AGG + tig0016170:11369-11388 Msa1357720:intergenic 20.0%
!! TGATAGTTGAAATGTTAATA+TGG - tig0016170:11392-11411 Msa1357720:three_prime_UTR 20.0%
!!! AGTTAAAAAGTTGATGTATA+TGG + tig0016170:11431-11450 Msa1357720:intergenic 20.0%
!!! TCGTGTTTTTTTTTTCAAAA+TGG - tig0016170:11927-11946 Msa1357720:intron 20.0%
!!! ATATATTTTGTCTTCTCTAA+CGG - tig0016170:12072-12091 Msa1357720:intron 20.0%
!! TATTGTTTAACATTAAAGCA+TGG - tig0016170:12123-12142 Msa1357720:intron 20.0%
!! ATTGTTTAACATTAAAGCAT+GGG - tig0016170:12124-12143 Msa1357720:intron 20.0%
!! TCAATGGTTACATTATATAT+TGG - tig0016170:12230-12249 Msa1357720:intron 20.0%
!!! CATATTTGACTAAAGTTTTA+TGG + tig0016170:12350-12369 Msa1357720:intergenic 20.0%
!! AATATGTTGAGTCTATATAA+AGG + tig0016170:12482-12501 Msa1357720:intergenic 20.0%
!!! ATAAAAGCATAAATAGCTTA+CGG - tig0016170:13029-13048 Msa1357720:intron 20.0%
!!! TATGTAGTATATTTGCTTTT+GGG + tig0016170:13057-13076 Msa1357720:intergenic 20.0%
!!! TTATGTAGTATATTTGCTTT+TGG + tig0016170:13058-13077 Msa1357720:intergenic 20.0%
!! AAATATACTACATAAGTAGT+AGG - tig0016170:13063-13082 Msa1357720:intron 20.0%
!! ATGATAATAATAGTAACAAG+AGG - tig0016170:13201-13220 Msa1357720:intron 20.0%
!! ATACAAATATATATACCTGT+AGG - tig0016170:13267-13286 Msa1357720:intron 20.0%
!!! CTTTATAAAAGTATTGTAAG+GGG - tig0016170:13352-13371 Msa1357720:intron 20.0%
!!! TTCAAAAACTTTTATACTAC+AGG + tig0016170:13502-13521 Msa1357720:intergenic 20.0%
!!! CAACTTTTTAGGATAAAAAA+CGG - tig0016170:13615-13634 Msa1357720:intron 20.0%
!! GATGAAATAATGATAACTTA+TGG + tig0016170:15506-15525 Msa1357720:intergenic 20.0%
!! TATACTTGAATACATCAATT+TGG - tig0016170:15571-15590 Msa1357720:intron 20.0%
!! TCCATAAACAAGTAAAATAA+AGG - tig0016170:15594-15613 Msa1357720:intron 20.0%
!!! TCCTTTATTTTACTTGTTTA+TGG + tig0016170:15598-15617 Msa1357720:intergenic 20.0%
!! GATAATACATAATATATGCA+AGG - tig0016170:15663-15682 Msa1357720:intron 20.0%
!!! AATTTGGTCTTTTTTTTTTG+TGG + tig0016170:15711-15730 Msa1357720:intergenic 20.0%
!! AGAATGACATATATTTCAAT+AGG + tig0016170:16032-16051 Msa1357720:intergenic 20.0%
!! ATTGAAATATATGTCATTCT+AGG - tig0016170:16032-16051 Msa1357720:CDS 20.0%
!! TACCTAAAATAACATTTAGA+TGG - tig0016170:16270-16289 Msa1357720:intron 20.0%
!! ACCTAAAATAACATTTAGAT+GGG - tig0016170:16271-16290 Msa1357720:intron 20.0%
!! AGGTTATATAACTATAAACA+AGG - tig0016170:16360-16379 Msa1357720:intron 20.0%
!!! ATGTCATTTTACTAAAAAGA+TGG - tig0016170:16387-16406 Msa1357720:intron 20.0%
!!! TTAAGGGTTAATTATGTTTT+TGG - tig0016170:16857-16876 Msa1357720:intron 20.0%
!! TAATATATGTTGCATGAAAA+TGG - tig0016170:17556-17575 Msa1357720:CDS 20.0%
!!! ATTAATTATTTTTTGGTAGG+GGG - tig0016170:17648-17667 Msa1357720:intron 20.0%
! TATTATCAACTACATGTACT+TGG + tig0016170:7274-7293 None:intergenic 25.0%
! TTGGGAATCAAAAACAAATT+TGG - tig0016170:7391-7410 Msa1357720:three_prime_UTR 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + tig0016170:7481-7500 Msa1357720:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + tig0016170:7591-7610 Msa1357720:intergenic 25.0%
! CAAAGTAGGTCAATTAAATT+GGG - tig0016170:7650-7669 Msa1357720:three_prime_UTR 25.0%
!! AAAACTGTTTTGCTTCTTTA+TGG - tig0016170:7876-7895 Msa1357720:intron 25.0%
!! CATAGAATTTTGTTAATACC+GGG + tig0016170:8384-8403 Msa1357720:intergenic 25.0%
! AATTAGGGAGAAAAAGAATA+AGG + tig0016170:8409-8428 Msa1357720:intergenic 25.0%
! AGATCTAATGCACTTAATTA+GGG + tig0016170:8424-8443 Msa1357720:intergenic 25.0%
! AAGATCTAATGCACTTAATT+AGG + tig0016170:8425-8444 Msa1357720:intergenic 25.0%
!! CATTAGATCTTTACTAGTTT+AGG - tig0016170:8434-8453 Msa1357720:intron 25.0%
!! TACTAGTTTAGGCTAAATTA+TGG - tig0016170:8445-8464 Msa1357720:intron 25.0%
!!! TTTGATAGTTGATTTGAGAT+AGG - tig0016170:8512-8531 Msa1357720:intron 25.0%
! CTTAAGGGACTAAAATAAAA+CGG + tig0016170:8669-8688 Msa1357720:intergenic 25.0%
!!! TTATTTTTGCTAGTTGGTTT+TGG - tig0016170:8857-8876 Msa1357720:intron 25.0%
!!! TATTTTAAGCATGTGTTGTT+TGG + tig0016170:9155-9174 Msa1357720:intergenic 25.0%
! ATATATACTTAATCCTCCAA+AGG - tig0016170:9172-9191 Msa1357720:intron 25.0%
! CAATCCAAACATGTTAATTT+GGG + tig0016170:9730-9749 Msa1357720:intergenic 25.0%
! TCAATCCAAACATGTTAATT+TGG + tig0016170:9731-9750 Msa1357720:intergenic 25.0%
!! AGAAAATAATGGAGTCAAAT+GGG + tig0016170:9967-9986 Msa1357720:intergenic 25.0%
!!! GCTTAAGGTATCATATTTTA+TGG - tig0016170:10018-10037 Msa1357720:intron 25.0%
!!! TAGTGTTCATTATTTTGAAC+AGG - tig0016170:10163-10182 Msa1357720:three_prime_UTR 25.0%
!!! AGTGTTCATTATTTTGAACA+GGG - tig0016170:10164-10183 Msa1357720:three_prime_UTR 25.0%
! ACATGAAAGAAATTAGGAAT+TGG - tig0016170:10349-10368 Msa1357720:intron 25.0%
! CATGAAAGAAATTAGGAATT+GGG - tig0016170:10350-10369 Msa1357720:intron 25.0%
! TGAATTTCAATCGGTATATA+AGG + tig0016170:10526-10545 Msa1357720:intergenic 25.0%
!!! CGTTTGTTATAGCTTTTTTT+AGG + tig0016170:10948-10967 Msa1357720:intergenic 25.0%
! ATATTCATGTTGTATAGGAA+CGG + tig0016170:11021-11040 Msa1357720:intergenic 25.0%
!!! ACAAATTTTTTCTGCAAAAG+CGG + tig0016170:11086-11105 Msa1357720:intergenic 25.0%
! GTTATAACAACAATTAAGGT+TGG + tig0016170:11166-11185 Msa1357720:intergenic 25.0%
! CTGAGTTATAACAACAATTA+AGG + tig0016170:11170-11189 Msa1357720:intergenic 25.0%
! GACAATACATTGTAATATGT+AGG - tig0016170:11198-11217 Msa1357720:three_prime_UTR 25.0%
! CAATACATTGTAATATGTAG+GGG - tig0016170:11200-11219 Msa1357720:three_prime_UTR 25.0%
! TAGTTAAAGTTCACATTTGA+AGG + tig0016170:11259-11278 Msa1357720:intergenic 25.0%
!! ATTTCATTCATGAGGTATTA+AGG + tig0016170:11361-11380 Msa1357720:intergenic 25.0%
!!! CATGTTTTAAAAATGTTCTC+TGG - tig0016170:11534-11553 Msa1357720:three_prime_UTR 25.0%
!! CATTTTCCAATATAAAAAGC+AGG + tig0016170:11605-11624 Msa1357720:intergenic 25.0%
!!! GTTTTGTTAACTAATGTTCA+AGG + tig0016170:11632-11651 Msa1357720:intergenic 25.0%
!!! AAGGATCTTATATTTTGAGA+TGG + tig0016170:11674-11693 Msa1357720:intergenic 25.0%
! TTTGCAGAAGCAAATAAAAA+GGG + tig0016170:11800-11819 Msa1357720:intergenic 25.0%
!! TTTTGCAGAAGCAAATAAAA+AGG + tig0016170:11801-11820 Msa1357720:intergenic 25.0%
! ATGAGATAGACAAACAAAAA+GGG + tig0016170:11834-11853 Msa1357720:intergenic 25.0%
! TATGAGATAGACAAACAAAA+AGG + tig0016170:11835-11854 Msa1357720:intergenic 25.0%
! TTCAAAATGGTCCTATAAAT+AGG - tig0016170:11940-11959 Msa1357720:intron 25.0%
! TTGTTTAACATTAAAGCATG+GGG - tig0016170:12125-12144 Msa1357720:intron 25.0%
!!! TTTGTTGATTTTCATCACAA+GGG - tig0016170:12170-12189 Msa1357720:intron 25.0%
! TTAATGCGTAATGTATAAAG+TGG - tig0016170:12289-12308 Msa1357720:intron 25.0%
! CTTTAGTCAAATATGAGAAA+TGG - tig0016170:12355-12374 Msa1357720:intron 25.0%
! AGACTCAACATATTATAGAT+TGG - tig0016170:12488-12507 Msa1357720:intron 25.0%
! CTCAATCAGTCAAAAAAAAA+AGG - tig0016170:12681-12700 Msa1357720:intron 25.0%
!! AGTCAAAAAAAAAAGGTACA+AGG - tig0016170:12688-12707 Msa1357720:intron 25.0%
!! AAAAAAAAGGTACAAGGAAA+AGG - tig0016170:12694-12713 Msa1357720:intron 25.0%
!! AAAAAAAGGTACAAGGAAAA+GGG - tig0016170:12695-12714 Msa1357720:intron 25.0%
! ATTATATTTGGTTACCCTTA+AGG + tig0016170:12725-12744 Msa1357720:intergenic 25.0%
! TAGGTACATACAAATTACAA+TGG - tig0016170:13286-13305 Msa1357720:intron 25.0%
!! TTTCAATGGTACAACTTTTT+AGG - tig0016170:13604-13623 Msa1357720:intron 25.0%
! AATAAGCACTAGTAACAAAA+CGG - tig0016170:13639-13658 Msa1357720:intron 25.0%
! AAGCGCAAGTATAAATATAT+AGG + tig0016170:13673-13692 Msa1357720:intergenic 25.0%
! ATATATGGCTATTATAGACA+AGG + tig0016170:13720-13739 Msa1357720:intergenic 25.0%
!!! AAAATTGTTTTGCTTCACTA+TGG - tig0016170:13901-13920 Msa1357720:intron 25.0%
!!! TTTTGTTTAGGAATGTATGA+TGG + tig0016170:14011-14030 Msa1357720:intergenic 25.0%
! GATTACAAATACAGATTTGT+AGG + tig0016170:14611-14630 Msa1357720:intergenic 25.0%
! GATGAAATATATCAGACTAT+AGG - tig0016170:14669-14688 Msa1357720:intron 25.0%
!!! CAACAAAAAGGTTTTTTACT+CGG + tig0016170:14698-14717 Msa1357720:intergenic 25.0%
!! AGATTTTGTATAGAATTGCA+CGG - tig0016170:14835-14854 Msa1357720:intron 25.0%
! TGTGATTGATTATGTAACTT+TGG - tig0016170:15049-15068 Msa1357720:intron 25.0%
! ATGCTTAGTAAAATGGTTTA+CGG - tig0016170:15254-15273 Msa1357720:intron 25.0%
! TACTTGACCTTCATATAAAA+GGG + tig0016170:15320-15339 Msa1357720:intergenic 25.0%
!! TTTTATATGAAGGTCAAGTA+CGG - tig0016170:15320-15339 Msa1357720:intron 25.0%
!! TTGAGACTTAATTTTACGAA+AGG + tig0016170:15372-15391 Msa1357720:intergenic 25.0%
! AATTAAGTCTCAAGAGTTAA+AGG - tig0016170:15379-15398 Msa1357720:intron 25.0%
!! AACCATATTAGGCAAATTTT+AGG + tig0016170:15467-15486 Msa1357720:intergenic 25.0%
! CAATAGTTTAAAGACCAAAT+TGG - tig0016170:15636-15655 Msa1357720:intron 25.0%
! ATGTATTATCCATACCAATT+TGG + tig0016170:15653-15672 Msa1357720:intergenic 25.0%
! CCTAAAATAACATTTAGATG+GGG - tig0016170:16272-16291 Msa1357720:intron 25.0%
!!! ATTGTGTTGTATGTTACTTT+AGG - tig0016170:16606-16625 Msa1357720:intron 25.0%
!!! GAGTGCAATTTTTTTTTGTA+GGG + tig0016170:16944-16963 Msa1357720:intergenic 25.0%
!!! TGAGTGCAATTTTTTTTTGT+AGG + tig0016170:16945-16964 Msa1357720:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG + tig0016170:16976-16995 Msa1357720:intergenic 25.0%
! TACAAGCATACGTTATTAAA+AGG - tig0016170:17034-17053 Msa1357720:intron 25.0%
! AACATACGTCAAAGTATATA+TGG + tig0016170:17609-17628 Msa1357720:intergenic 25.0%
! ATATATACTTTGACGTATGT+TGG - tig0016170:17608-17627 Msa1357720:CDS 25.0%
! AAGAATGGTTTATATTGTGT+TGG - tig0016170:17733-17752 Msa1357720:intron 25.0%
! TAAAATAAAGATCAAAGGAG+AGG - tig0016170:17942-17961 Msa1357720:intron 25.0%
! AAGTATAAGCTTCAAACATA+TGG - tig0016170:17980-17999 Msa1357720:intron 25.0%
! AGTATAAGCTTCAAACATAT+GGG - tig0016170:17981-18000 Msa1357720:intron 25.0%
!! GTTCTAATTCTTTTCATACA+CGG + tig0016170:18036-18055 Msa1357720:intergenic 25.0%
!!! CTATTTTTTGTGGTTGACAA+AGG + tig0016170:7360-7379 Msa1357720:intergenic 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + tig0016170:7502-7521 Msa1357720:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + tig0016170:7503-7522 Msa1357720:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + tig0016170:7606-7625 Msa1357720:intergenic 30.0%
CCAATTTAATTGACCTACTT+TGG + tig0016170:7652-7671 Msa1357720:intergenic 30.0%
CCAAAGTAGGTCAATTAAAT+TGG - tig0016170:7649-7668 Msa1357720:three_prime_UTR 30.0%
!!! GTTTTAAGTTTGTACTACTC+AGG + tig0016170:7724-7743 Msa1357720:intergenic 30.0%
!! ATGTTGATGATGATGAGAAA+TGG - tig0016170:8086-8105 Msa1357720:intron 30.0%
CATTCAACTAGGTACAAAAA+TGG - tig0016170:8247-8266 Msa1357720:intron 30.0%
AACTAGGTACAAAAATGGAA+AGG - tig0016170:8252-8271 Msa1357720:intron 30.0%
! TATGGAGATTGCTTTAGATT+TGG - tig0016170:8321-8340 Msa1357720:intron 30.0%
!!! CGTTTTATTTTAGTCCCTTA+AGG - tig0016170:8667-8686 Msa1357720:three_prime_UTR 30.0%
!! GTCATTTCGTTTTGGTAAAT+TGG - tig0016170:8760-8779 Msa1357720:three_prime_UTR 30.0%
!! TTTGCAAGTTGAATTTTGGA+GGG + tig0016170:9202-9221 Msa1357720:intergenic 30.0%
!! ATTTGCAAGTTGAATTTTGG+AGG + tig0016170:9203-9222 Msa1357720:intergenic 30.0%
!! GTGATTTGCAAGTTGAATTT+TGG + tig0016170:9206-9225 Msa1357720:intergenic 30.0%
!! ATTTTGGTCGTAAGTTACAA+AGG + tig0016170:9274-9293 Msa1357720:intergenic 30.0%
ATGTATTGTTATGCACATGT+AGG - tig0016170:9322-9341 Msa1357720:intron 30.0%
! TGTAGGTTCATTTTCTTTCT+AGG - tig0016170:9339-9358 Msa1357720:intron 30.0%
! GTAGGTTCATTTTCTTTCTA+GGG - tig0016170:9340-9359 Msa1357720:intron 30.0%
TCTAGGGATATGATGTATTA+TGG - tig0016170:9356-9375 Msa1357720:intron 30.0%
CTAGGGATATGATGTATTAT+GGG - tig0016170:9357-9376 Msa1357720:intron 30.0%
TAGGGATATGATGTATTATG+GGG - tig0016170:9358-9377 Msa1357720:intron 30.0%
AAGTTTCCTATAATTGACGT+GGG - tig0016170:9521-9540 Msa1357720:intron 30.0%
ACTGTCAAGAAAATCAAATC+TGG - tig0016170:9545-9564 Msa1357720:intron 30.0%
AATCAAATCTGGAGAAATAC+AGG - tig0016170:9556-9575 Msa1357720:intron 30.0%
TTTGCCCAAATTAACATGTT+TGG - tig0016170:9723-9742 Msa1357720:intron 30.0%
GTCAAGTTTCCATATATGTA+TGG + tig0016170:9811-9830 Msa1357720:intergenic 30.0%
! CAGAAAATAATGGAGTCAAA+TGG + tig0016170:9968-9987 Msa1357720:intergenic 30.0%
TCAAGAGATCAACTCATAAA+TGG - tig0016170:9996-10015 Msa1357720:intron 30.0%
ATCAACTCATAAATGGCTTA+AGG - tig0016170:10003-10022 Msa1357720:intron 30.0%
TCCTCAACATGAAAGAAATT+AGG - tig0016170:10343-10362 Msa1357720:intron 30.0%
TCCTAATTTCTTTCATGTTG+AGG + tig0016170:10347-10366 Msa1357720:intergenic 30.0%
TTAGGATGGACCATAAATTA+AGG - tig0016170:10439-10458 Msa1357720:intron 30.0%
!! ACTTTTGGGTGAATTTCAAT+CGG + tig0016170:10535-10554 Msa1357720:intergenic 30.0%
! TCTATTTTGCGTTTGTTTAG+AGG - tig0016170:10653-10672 Msa1357720:intron 30.0%
TTTAGAGGAGAGAGAAAATA+TGG + tig0016170:10775-10794 Msa1357720:intergenic 30.0%
!!! GATTCAACTTTTTTCAAGGA+AGG + tig0016170:11144-11163 Msa1357720:intergenic 30.0%
!!! GTTGGATTCAACTTTTTTCA+AGG + tig0016170:11148-11167 Msa1357720:intergenic 30.0%
CACATTTGAAGGTGAATAAA+TGG + tig0016170:11248-11267 Msa1357720:intergenic 30.0%
! TTGTTCAATATAAAAAGCGC+AGG + tig0016170:11569-11588 Msa1357720:intergenic 30.0%
!!! CATTCTCCTGCTTTTTATAT+TGG - tig0016170:11596-11615 Msa1357720:three_prime_UTR 30.0%
TTGCAGAAGCAAATAAAAAG+GGG + tig0016170:11799-11818 Msa1357720:intergenic 30.0%
TGAGATAGACAAACAAAAAG+GGG + tig0016170:11833-11852 Msa1357720:intergenic 30.0%
TTCCTTTCGTTCCTATTTAT+AGG + tig0016170:11954-11973 Msa1357720:intergenic 30.0%
!!! CTTTGTTGATTTTCATCACA+AGG - tig0016170:12169-12188 Msa1357720:intron 30.0%
! AAGAAACACATTAGTCTCAA+TGG - tig0016170:12214-12233 Msa1357720:intron 30.0%
! TGTCATTTCCTAAACTTCAA+AGG - tig0016170:12397-12416 Msa1357720:intron 30.0%
!! TGAAACATCCTTTGAAGTTT+AGG + tig0016170:12408-12427 Msa1357720:intergenic 30.0%
CTCAACATATTATAGATTGG+CGG - tig0016170:12491-12510 Msa1357720:intron 30.0%
TAAGTCAGACCAATTTATAG+AGG + tig0016170:12796-12815 Msa1357720:intergenic 30.0%
TTGCTTCATCTCATCTTATT+TGG - tig0016170:12944-12963 Msa1357720:intron 30.0%
AGATGAAATGTTCATTGTGT+TGG - tig0016170:13160-13179 Msa1357720:intron 30.0%
! TGTAATTTGTATGTACCTAC+AGG + tig0016170:13285-13304 Msa1357720:intergenic 30.0%
AATGAAAGAGTGATAGTTGT+TGG - tig0016170:13804-13823 Msa1357720:intron 30.0%
! CAAAACAATTTTCTCTTTCG+AGG + tig0016170:13893-13912 Msa1357720:intergenic 30.0%
! CTTCAATTTCAGGTACAAAA+GGG + tig0016170:14223-14242 Msa1357720:intergenic 30.0%
! CTTTTGTACCTGAAATTGAA+GGG - tig0016170:14222-14241 Msa1357720:intron 30.0%
ATTCAACTGGGTTTAAGAAT+GGG - tig0016170:14273-14292 Msa1357720:intron 30.0%
!! ATGAACATGTTCTTGTTGTT+GGG - tig0016170:14309-14328 Msa1357720:intron 30.0%
TTTGATGTGTGCATCTTAAA+AGG + tig0016170:14515-14534 Msa1357720:intergenic 30.0%
AAAATTATAGACAGAGCACA+TGG + tig0016170:14562-14581 Msa1357720:intergenic 30.0%
! CGAGTAAAAAACCTTTTTGT+TGG - tig0016170:14696-14715 Msa1357720:intron 30.0%
TAGAATTGCACGGATATATA+TGG - tig0016170:14845-14864 Msa1357720:intron 30.0%
AGAATTGCACGGATATATAT+GGG - tig0016170:14846-14865 Msa1357720:intron 30.0%
!! GCACTTTAAAGTATATCTGA+GGG + tig0016170:15120-15139 Msa1357720:intergenic 30.0%
!! TGCACTTTAAAGTATATCTG+AGG + tig0016170:15121-15140 Msa1357720:intergenic 30.0%
! TCTGATGAAGTATTTGTCAA+TGG - tig0016170:15208-15227 Msa1357720:CDS 30.0%
GTACTTGACCTTCATATAAA+AGG + tig0016170:15321-15340 Msa1357720:intergenic 30.0%
AAGTATCCTATTATTGACGT+TGG - tig0016170:15344-15363 Msa1357720:intron 30.0%
! AAAGGTACGTTAGCAATAAT+TGG - tig0016170:15397-15416 Msa1357720:CDS 30.0%
CACCTAAAATTTGCCTAATA+TGG - tig0016170:15462-15481 Msa1357720:CDS 30.0%
! ATTGACTTCGAAACCATATT+AGG + tig0016170:15478-15497 Msa1357720:intergenic 30.0%
GTTTAAAGACCAAATTGGTA+TGG - tig0016170:15641-15660 Msa1357720:intron 30.0%
TACATAATATATGCAAGGTC+CGG - tig0016170:15668-15687 Msa1357720:intron 30.0%
!!! TTGGTCTTTTTTTTTTGTGG+TGG + tig0016170:15708-15727 Msa1357720:intergenic 30.0%
!!! CCCCATCTAAATGTTATTTT+AGG + tig0016170:16275-16294 Msa1357720:intergenic 30.0%
AAGAATGTCCTCTTCAAAAA+CGG - tig0016170:16661-16680 Msa1357720:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG + tig0016170:16900-16919 Msa1357720:intergenic 30.0%
!!! TTTTGCGATATTTTTTTCGG+AGG + tig0016170:17061-17080 Msa1357720:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG + tig0016170:17198-17217 Msa1357720:intergenic 30.0%
AAGTAAGGACTAAACTTAGA+AGG - tig0016170:17337-17356 Msa1357720:CDS 30.0%
! TTAGAAGGTCGCAATTTTAT+AGG - tig0016170:17352-17371 Msa1357720:CDS 30.0%
! TAGAAGGTCGCAATTTTATA+GGG - tig0016170:17353-17372 Msa1357720:CDS 30.0%
AAGTAAGGACTAAACTTAGA+AGG - tig0016170:17337-17356 Msa1357720:CDS 30.0%
! TTAGAAGGTCGCAATTTTAT+AGG - tig0016170:17352-17371 Msa1357720:CDS 30.0%
! TAGAAGGTCGCAATTTTATA+GGG - tig0016170:17353-17372 Msa1357720:CDS 30.0%
TGTAGTAACCAAAAGAAATG+TGG - tig0016170:17583-17602 Msa1357720:CDS 30.0%
! ATATATGGCCACATTTCTTT+TGG + tig0016170:17594-17613 Msa1357720:intergenic 30.0%
! GATTACCTTTTGAATGATGA+TGG - tig0016170:17673-17692 Msa1357720:intron 30.0%
GAATACCATCATCATTCAAA+AGG + tig0016170:17681-17700 Msa1357720:intergenic 30.0%
TATATTGTGTTGGACTATCA+AGG - tig0016170:17743-17762 Msa1357720:intron 30.0%
! ACTTCATAGATTTTGCATGA+TGG + tig0016170:17824-17843 Msa1357720:intergenic 30.0%
GTATAAGCTTCAAACATATG+GGG - tig0016170:17982-18001 Msa1357720:intron 30.0%
! TTTTTGTGGTTGACAAAGGA+TGG + tig0016170:7356-7375 Msa1357720:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG + tig0016170:7467-7486 Msa1357720:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - tig0016170:7636-7655 Msa1357720:three_prime_UTR 35.0%
GTAGGTCAATTAAATTGGGA+CGG - tig0016170:7654-7673 Msa1357720:three_prime_UTR 35.0%
TTCGAGAATGATGAAAGGTA+TGG + tig0016170:7852-7871 Msa1357720:intergenic 35.0%
TCTCTTTCGAGAATGATGAA+AGG + tig0016170:7857-7876 Msa1357720:intergenic 35.0%
!!! TGTTTTTTGGGTACATAGTG+AGG + tig0016170:7986-8005 Msa1357720:intergenic 35.0%
CAACAGCTCTGTTGTATATA+GGG + tig0016170:8054-8073 Msa1357720:intergenic 35.0%
TCAACAGCTCTGTTGTATAT+AGG + tig0016170:8055-8074 Msa1357720:intergenic 35.0%
!! TTGATGATGATGAGAAATGG+AGG - tig0016170:8089-8108 Msa1357720:intron 35.0%
! TGATGATGATGAGAAATGGA+GGG - tig0016170:8090-8109 Msa1357720:intron 35.0%
AAAGCTGAGAATAAGAGTTC+TGG - tig0016170:8115-8134 Msa1357720:intron 35.0%
! GCTTTAGATTTGGCTAACTT+TGG - tig0016170:8331-8350 Msa1357720:intron 35.0%
TTCAATCATTGTTAGAAGCC+CGG - tig0016170:8363-8382 Msa1357720:intron 35.0%
AATCTGCATGTTGCAAATCA+CGG + tig0016170:8472-8491 Msa1357720:intergenic 35.0%
!!! TTCCTAGTGTCATTTCGTTT+TGG - tig0016170:8752-8771 Msa1357720:three_prime_UTR 35.0%
TACCAAAACGAAATGACACT+AGG + tig0016170:8757-8776 Msa1357720:intergenic 35.0%
! AAACATCTGACTTGACAAGA+AGG - tig0016170:8788-8807 Msa1357720:intron 35.0%
!! ACAACACTTTAGCTCTTTGT+CGG + tig0016170:8827-8846 Msa1357720:intergenic 35.0%
!!! TTTTGCTAGTTGGTTTTGGA+AGG - tig0016170:8861-8880 Msa1357720:intron 35.0%
!!! TTGGTTTTGGAAGGTTTTAG+AGG - tig0016170:8870-8889 Msa1357720:intron 35.0%
ATCGTAGTATGTGTTTGCTT+TGG - tig0016170:9007-9026 Msa1357720:intron 35.0%
GTAAAAACAGTTCCAAAGTG+CGG - tig0016170:9115-9134 Msa1357720:intron 35.0%
!! AATTTTGGAGGGAAAACCTT+TGG + tig0016170:9191-9210 Msa1357720:intergenic 35.0%
GTTACAAAGGATAGACATGT+TGG + tig0016170:9261-9280 Msa1357720:intergenic 35.0%
AGGGATATGATGTATTATGG+GGG - tig0016170:9359-9378 Msa1357720:intron 35.0%
TATGGAGATCTGAGCAAATA+TGG - tig0016170:9449-9468 Msa1357720:intron 35.0%
TACTTCATCTTCATGGTGAA+CGG + tig0016170:9497-9516 Msa1357720:intergenic 35.0%
TTCACCATGAAGATGAAGTA+TGG - tig0016170:9497-9516 Msa1357720:intron 35.0%
CAAGTTTCCTATAATTGACG+TGG - tig0016170:9520-9539 Msa1357720:intron 35.0%
TCCAAGAGAGATCAGTATTT+AGG + tig0016170:9651-9670 Msa1357720:intergenic 35.0%
GCACTTGTGAATACATTAAG+AGG - tig0016170:9772-9791 Msa1357720:intron 35.0%
TAAAGACATAGATTGACGAG+TGG - tig0016170:9850-9869 Msa1357720:intron 35.0%
! AATAATGGAGTCAAATGGGT+AGG + tig0016170:9963-9982 Msa1357720:intergenic 35.0%
GAAACCAGTGCAGAAAATAA+TGG + tig0016170:9978-9997 Msa1357720:intergenic 35.0%
ATGACACTGCATTCAATCAA+GGG + tig0016170:10125-10144 Msa1357720:intergenic 35.0%
!!! GTTCATTATTTTGAACAGGG+TGG - tig0016170:10167-10186 Msa1357720:three_prime_UTR 35.0%
AGCAAATGATATTGCTATGC+TGG - tig0016170:10319-10338 Msa1357720:intron 35.0%
CATGTCATATGTTCTGTGAT+TGG - tig0016170:10378-10397 Msa1357720:intron 35.0%
TCACCCAAAAGTTAAAACTG+TGG - tig0016170:10543-10562 Msa1357720:intron 35.0%
CACCCAAAAGTTAAAACTGT+GGG - tig0016170:10544-10563 Msa1357720:intron 35.0%
ACATTGTAATATGTAGGGGT+CGG - tig0016170:11204-11223 Msa1357720:three_prime_UTR 35.0%
! ATATAAAAAGCGCAGGAGAA+GGG + tig0016170:11562-11581 Msa1357720:intergenic 35.0%
! AATATAAAAAGCGCAGGAGA+AGG + tig0016170:11563-11582 Msa1357720:intergenic 35.0%
TGCAGAAGCAAATAAAAAGG+GGG + tig0016170:11798-11817 Msa1357720:intergenic 35.0%
GTCCTATAAATAGGAACGAA+AGG - tig0016170:11949-11968 Msa1357720:intron 35.0%
! ACACTTGCTCTGAATGTAAA+AGG - tig0016170:12652-12671 Msa1357720:intron 35.0%
GGTCGTAAACCTCTATAAAT+TGG - tig0016170:12784-12803 Msa1357720:intron 35.0%
! TACGTATGAGTTTGGTTTCA+CGG + tig0016170:12834-12853 Msa1357720:intergenic 35.0%
GGATTGTATAAGGAATGGAT+TGG + tig0016170:13872-13891 Msa1357720:intergenic 35.0%
TTCGAGGATTGTATAAGGAA+TGG + tig0016170:13877-13896 Msa1357720:intergenic 35.0%
TCTCTTTCGAGGATTGTATA+AGG + tig0016170:13882-13901 Msa1357720:intergenic 35.0%
!!! GCTCGCAAAATTGTTTTTTG+AGG + tig0016170:13959-13978 Msa1357720:intergenic 35.0%
! TGTATGATGGAAAAGAAGGT+GGG + tig0016170:13998-14017 Msa1357720:intergenic 35.0%
! ATGTATGATGGAAAAGAAGG+TGG + tig0016170:13999-14018 Msa1357720:intergenic 35.0%
! GGAATGTATGATGGAAAAGA+AGG + tig0016170:14002-14021 Msa1357720:intergenic 35.0%
!! ATGATGAAGGTTCTGAGAAA+TGG - tig0016170:14111-14130 Msa1357720:intron 35.0%
AAGGCTATGAATAAGGATTC+CGG - tig0016170:14140-14159 Msa1357720:intron 35.0%
! GGAATATGAAGGAAGGTTTT+TGG - tig0016170:14172-14191 Msa1357720:intron 35.0%
! CCTTCAATTTCAGGTACAAA+AGG + tig0016170:14224-14243 Msa1357720:intergenic 35.0%
! CCTTTTGTACCTGAAATTGA+AGG - tig0016170:14221-14240 Msa1357720:intron 35.0%
AGTTGAATGAATCACTTTCC+CGG + tig0016170:14261-14280 Msa1357720:intergenic 35.0%
GGAAAGTGATTCATTCAACT+GGG - tig0016170:14261-14280 Msa1357720:intron 35.0%
CATTCAACTGGGTTTAAGAA+TGG - tig0016170:14272-14291 Msa1357720:intron 35.0%
! GATGAACATGTTCTTGTTGT+TGG - tig0016170:14308-14327 Msa1357720:intron 35.0%
!! TTCTGGAATGGAAATTGCAT+TGG - tig0016170:14340-14359 Msa1357720:intron 35.0%
!!! CCTTTTTGTTGGTGATGAAA+CGG - tig0016170:14707-14726 Msa1357720:intron 35.0%
!!! CTTTTTGTTGGTGATGAAAC+GGG - tig0016170:14708-14727 Msa1357720:intron 35.0%
! GTTAGCTGTTGATTATACGT+AGG - tig0016170:15006-15025 Msa1357720:intron 35.0%
ACGAATACAATGTAATGTGC+AGG - tig0016170:15145-15164 Msa1357720:CDS 35.0%
! GAAGTATTTGTCAATGGAGA+TGG - tig0016170:15214-15233 Msa1357720:CDS 35.0%
! GATGGTGATGCTTAGTAAAA+TGG - tig0016170:15247-15266 Msa1357720:intron 35.0%
TACGGAGATGTCACAAATTA+TGG - tig0016170:15272-15291 Msa1357720:intron 35.0%
GATGTCACAAATTATGGAGT+TGG - tig0016170:15278-15297 Msa1357720:intron 35.0%
! TCACAAATTATGGAGTTGGT+AGG - tig0016170:15282-15301 Msa1357720:intron 35.0%
AAGGTTCCAACGTCAATAAT+AGG + tig0016170:15353-15372 Msa1357720:intergenic 35.0%
ACGTTAGCAATAATTGGCAT+TGG - tig0016170:15403-15422 Msa1357720:CDS 35.0%
!! ATAATTGGCATTGGTTGCTT+TGG - tig0016170:15412-15431 Msa1357720:CDS 35.0%
ACATAATATATGCAAGGTCC+GGG - tig0016170:15669-15688 Msa1357720:intron 35.0%
!!! TCTTTTTTTTTTGTGGTGGC+CGG + tig0016170:15704-15723 Msa1357720:intergenic 35.0%
CTAACACTCTCTCATCAATT+TGG + tig0016170:15727-15746 Msa1357720:intergenic 35.0%
TCTGAATCATTCTTCAAGTG+AGG + tig0016170:16450-16469 Msa1357720:intergenic 35.0%
! GACTCTATTATTTTCTGCAC+CGG - tig0016170:16700-16719 Msa1357720:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG + tig0016170:16884-16903 Msa1357720:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG + tig0016170:16885-16904 Msa1357720:intergenic 35.0%
ATTCTTTCCCTTCCAATGAA+CGG + tig0016170:17719-17738 Msa1357720:intergenic 35.0%
AGTACAACGTTAGATGCAGT+GGG + tig0016170:7430-7449 Msa1357720:intergenic 40.0%
TAGTACAACGTTAGATGCAG+TGG + tig0016170:7431-7450 Msa1357720:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + tig0016170:7466-7485 Msa1357720:intergenic 40.0%
GTCAATTAAATTGGGACGGA+GGG - tig0016170:7658-7677 Msa1357720:three_prime_UTR 40.0%
TAACAGAATGCATGAAGCAC+CGG - tig0016170:7766-7785 Msa1357720:intron 40.0%
!! GAAGCACCGGTGATAATAAT+CGG - tig0016170:7779-7798 Msa1357720:intron 40.0%
! TTTTGTTAAGCAAGCTGCTG+TGG + tig0016170:7825-7844 Msa1357720:intergenic 40.0%
ATGAAGATGAACACGATCGT+AGG + tig0016170:7912-7931 Msa1357720:intergenic 40.0%
TGAGGATAAGAAGGTGGAAA+AGG + tig0016170:7968-7987 Msa1357720:intergenic 40.0%
ACATAGTGAGGATAAGAAGG+TGG + tig0016170:7974-7993 Msa1357720:intergenic 40.0%
GGTACATAGTGAGGATAAGA+AGG + tig0016170:7977-7996 Msa1357720:intergenic 40.0%
! TAAGAGTTCTGGTGAAGTTG+AGG - tig0016170:8126-8145 Msa1357720:intron 40.0%
! GGAGTATTCTGGAAGATTCT+TGG - tig0016170:8147-8166 Msa1357720:intron 40.0%
AGATTCTTGGTTGTTGCTAG+TGG - tig0016170:8160-8179 Msa1357720:intron 40.0%
AAGGGTTGGAGAGTTTCAAA+GGG - tig0016170:8215-8234 Msa1357720:intron 40.0%
GGAAAGTGATGCATTCAACT+AGG - tig0016170:8236-8255 Msa1357720:intron 40.0%
! GATGAGCATGTTCTTGTTGT+TGG - tig0016170:8283-8302 Msa1357720:intron 40.0%
!! CATGTTCTTGTTGTTGGTTC+TGG - tig0016170:8289-8308 Msa1357720:intron 40.0%
!! GTTGTTGGTTCTGGTAATTC+TGG - tig0016170:8298-8317 Msa1357720:intron 40.0%
!! TGGTTCTGGTAATTCTGGTA+TGG - tig0016170:8303-8322 Msa1357720:intron 40.0%
GGGCTTCTAACAATGATTGA+AGG + tig0016170:8364-8383 Msa1357720:intergenic 40.0%
GTGTGACGATTGTACCTTAA+GGG + tig0016170:8684-8703 Msa1357720:intergenic 40.0%
TGTGTGACGATTGTACCTTA+AGG + tig0016170:8685-8704 Msa1357720:intergenic 40.0%
TATGTGTTTGCTTTGGCAGT+GGG - tig0016170:9014-9033 Msa1357720:intron 40.0%
!! TCTTAGCTTTGCTGCAAATG+CGG + tig0016170:9073-9092 Msa1357720:intergenic 40.0%
TAACTATCTGTCACCAAGCA+CGG - tig0016170:9391-9410 Msa1357720:intron 40.0%
ATAGCAAGCAGGATTGTGTA+TGG - tig0016170:9431-9450 Msa1357720:intron 40.0%
! GGTATACCTTTTCCTAGTGA+AGG - tig0016170:9470-9489 Msa1357720:intron 40.0%
ACTTCATCTTCATGGTGAAC+GGG + tig0016170:9496-9515 Msa1357720:intergenic 40.0%
CTTGCCATACTTCATCTTCA+TGG + tig0016170:9504-9523 Msa1357720:intergenic 40.0%
ACAGTTCCCACGTCAATTAT+AGG + tig0016170:9530-9549 Msa1357720:intergenic 40.0%
GCCTAAATACTGATCTCTCT+TGG - tig0016170:9647-9666 Msa1357720:intron 40.0%
AAGCACATGACATGCATAGA+TGG - tig0016170:9673-9692 Msa1357720:intron 40.0%
CATTAAGAGGTTGAGTGATG+CGG - tig0016170:9785-9804 Msa1357720:intron 40.0%
!! CTTATGCTCTCTATTTCTGC+TGG + tig0016170:9908-9927 Msa1357720:intergenic 40.0%
! GCAGAAATAGAGAGCATAAG+TGG - tig0016170:9908-9927 Msa1357720:intron 40.0%
! ATGGGTAGGATTTTCCATCA+CGG + tig0016170:9949-9968 Msa1357720:intergenic 40.0%
! GACTCCATTATTTTCTGCAC+TGG - tig0016170:9971-9990 Msa1357720:intron 40.0%
CATGACACTGCATTCAATCA+AGG + tig0016170:10126-10145 Msa1357720:intergenic 40.0%
! GGTGATCTTTTGAATGAGGA+TGG - tig0016170:10188-10207 Msa1357720:three_prime_UTR 40.0%
TTCCAATGGTATGGTAAACC+AGG + tig0016170:10224-10243 Msa1357720:intergenic 40.0%
TGGTTTACCATACCATTGGA+AGG - tig0016170:10223-10242 Msa1357720:three_prime_UTR 40.0%
GGTTTACCATACCATTGGAA+GGG - tig0016170:10224-10243 Msa1357720:three_prime_UTR 40.0%
TTCTTACCCTTCCAATGGTA+TGG + tig0016170:10233-10252 Msa1357720:intergenic 40.0%
TACCATTGGAAGGGTAAGAA+CGG - tig0016170:10233-10252 Msa1357720:three_prime_UTR 40.0%
! AAGAACGGTTTTTACTGCGT+TGG - tig0016170:10248-10267 Msa1357720:intron 40.0%
! AGAACGGTTTTTACTGCGTT+GGG - tig0016170:10249-10268 Msa1357720:intron 40.0%
! TTGTCAAGGAGGGGATTTTA+TGG - tig0016170:10272-10291 Msa1357720:intron 40.0%
CATCCTAAATCGCACACAAT+CGG + tig0016170:10427-10446 Msa1357720:intergenic 40.0%
!!! GGCCCACAGTTTTAACTTTT+GGG + tig0016170:10549-10568 Msa1357720:intergenic 40.0%
CATTGTAATATGTAGGGGTC+GGG - tig0016170:11205-11224 Msa1357720:three_prime_UTR 40.0%
! TTGATGCTGCTTGCATGTTA+AGG + tig0016170:12575-12594 Msa1357720:intergenic 40.0%
AAGGAAAAGGGCTAACCTTA+AGG - tig0016170:12707-12726 Msa1357720:intron 40.0%
AGGAAAAGGGCTAACCTTAA+GGG - tig0016170:12708-12727 Msa1357720:intron 40.0%
! AGTTTGGTTTCACGGAACTA+GGG + tig0016170:12826-12845 Msa1357720:intergenic 40.0%
TACGTGTGTACGTATGAGTT+TGG + tig0016170:12842-12861 Msa1357720:intergenic 40.0%
GAGATGAAGCAAACAACATG+AGG + tig0016170:12936-12955 Msa1357720:intergenic 40.0%
AGTAACAAGAGGAATGCTAG+AGG - tig0016170:13212-13231 Msa1357720:intron 40.0%
GTAACAAGAGGAATGCTAGA+GGG - tig0016170:13213-13232 Msa1357720:intron 40.0%
GAGAATGCAGAGTATGATGA+AGG - tig0016170:14098-14117 Msa1357720:intron 40.0%
!! TGAAGGTTCTGAGAAATGGA+AGG - tig0016170:14115-14134 Msa1357720:intron 40.0%
! TTCTGAGAAATGGAAGGTGA+AGG - tig0016170:14121-14140 Msa1357720:intron 40.0%
GAAGGTGAAGGCTATGAATA+AGG - tig0016170:14133-14152 Msa1357720:intron 40.0%
TATGAATAAGGATTCCGGTG+AGG - tig0016170:14145-14164 Msa1357720:intron 40.0%
TTCATATTCCTCAACCTCAC+CGG + tig0016170:14162-14181 Msa1357720:intergenic 40.0%
AGGTTGAGGAATATGAAGGA+AGG - tig0016170:14165-14184 Msa1357720:intron 40.0%
!!! TGAAGGAAGGTTTTTGGTTG+TGG - tig0016170:14178-14197 Msa1357720:intron 40.0%
CTCTTCAACCCTTCAATTTC+AGG + tig0016170:14233-14252 Msa1357720:intergenic 40.0%
! GAAGGGTTGAAGAGTTTTAC+CGG - tig0016170:14239-14258 Msa1357720:intron 40.0%
! AAGGGTTGAAGAGTTTTACC+GGG - tig0016170:14240-14259 Msa1357720:intron 40.0%
GGGAAAGTGATTCATTCAAC+TGG - tig0016170:14260-14279 Msa1357720:intron 40.0%
GCATTGGATCTTATCAACCA+TGG - tig0016170:14356-14375 Msa1357720:intron 40.0%
!! CGATTGAAGTTTTAGCACCA+TGG + tig0016170:14376-14395 Msa1357720:intergenic 40.0%
TTCAATCGTTGTTCGAAGCA+AGG - tig0016170:14388-14407 Msa1357720:intron 40.0%
CCGTTTCATCACCAACAAAA+AGG + tig0016170:14710-14729 Msa1357720:intergenic 40.0%
! TAAATGACGGGATGAATGAG+TGG - tig0016170:14944-14963 Msa1357720:intron 40.0%
AAAGTATATCTGAGGGTGAC+AGG + tig0016170:15113-15132 Msa1357720:intergenic 40.0%
! TGCAGGTTCACATTTTGTCA+AGG - tig0016170:15162-15181 Msa1357720:CDS 40.0%
! GCAGGTTCACATTTTGTCAA+GGG - tig0016170:15163-15182 Msa1357720:CDS 40.0%
! CAGGTTCACATTTTGTCAAG+GGG - tig0016170:15164-15183 Msa1357720:CDS 40.0%
GTATTTGTCAATGGAGATGG+TGG - tig0016170:15217-15236 Msa1357720:intron 40.0%
CATAATATATGCAAGGTCCG+GGG - tig0016170:15670-15689 Msa1357720:intron 40.0%
!!! TTTTTTTTTTGTGGTGGCCG+GGG + tig0016170:15702-15721 Msa1357720:intergenic 40.0%
!!! CTTTTTTTTTTGTGGTGGCC+GGG + tig0016170:15703-15722 Msa1357720:intergenic 40.0%
! TCAAGTGAGGTACTTTGCAA+GGG + tig0016170:16437-16456 Msa1357720:intergenic 40.0%
! TTCAAGTGAGGTACTTTGCA+AGG + tig0016170:16438-16457 Msa1357720:intergenic 40.0%
!! CTTACGCATTCTATTTCTGC+TGG + tig0016170:16637-16656 Msa1357720:intergenic 40.0%
GCAGAAATAGAATGCGTAAG+TGG - tig0016170:16637-16656 Msa1357720:intron 40.0%
!! GCAATTGACCGTTTTTGAAG+AGG + tig0016170:16672-16691 Msa1357720:intergenic 40.0%
TTCTTTCCCTTCCAATGAAC+GGG + tig0016170:17718-17737 Msa1357720:intergenic 40.0%
GTTCATTGGAAGGGAAAGAA+TGG - tig0016170:17718-17737 Msa1357720:intron 40.0%
CTATCAAGGAGAGGTTTCTA+TGG - tig0016170:17757-17776 Msa1357720:intron 40.0%
TCAACGATAACGACGATATG+CGG + tig0016170:17883-17902 Msa1357720:intergenic 40.0%
GTACAACGTTAGATGCAGTG+GGG + tig0016170:7429-7448 Msa1357720:intergenic 45.0%
GGTCAATTAAATTGGGACGG+AGG - tig0016170:7657-7676 Msa1357720:three_prime_UTR 45.0%
CCAGCTCCGATTATTATCAC+CGG + tig0016170:7788-7807 Msa1357720:intergenic 45.0%
ATAATCGGAGCTGGAACATC+CGG - tig0016170:7794-7813 Msa1357720:intron 45.0%
GAAGGTGGAAAAGGAAAGTG+TGG + tig0016170:7959-7978 Msa1357720:intergenic 45.0%
!! GGTGAAGTTGAGGAGTATTC+TGG - tig0016170:8136-8155 Msa1357720:intron 45.0%
GAAGGGTTGGAGAGTTTCAA+AGG - tig0016170:8214-8233 Msa1357720:intron 45.0%
! CATCTGACTTGACAAGAAGG+AGG - tig0016170:8791-8810 Msa1357720:intron 45.0%
GTATGTGTTTGCTTTGGCAG+TGG - tig0016170:9013-9032 Msa1357720:intron 45.0%
!! GCGGATTGTTACTGCGATTT+TGG + tig0016170:9054-9073 Msa1357720:intergenic 45.0%
! CAGCTTTAATAGCCGCACTT+TGG + tig0016170:9130-9149 Msa1357720:intergenic 45.0%
TTTGGAGGGAAAACCTTTGG+AGG + tig0016170:9188-9207 Msa1357720:intergenic 45.0%
AACTAGTGGTGATAGCAAGC+AGG - tig0016170:9420-9439 Msa1357720:intron 45.0%
GTGATGCGGCCATACATATA+TGG - tig0016170:9799-9818 Msa1357720:intron 45.0%
! AACCAAGTGTTGTTCCGTGA+TGG - tig0016170:9932-9951 Msa1357720:intron 45.0%
TTCCATCACGGAACAACACT+TGG + tig0016170:9937-9956 Msa1357720:intergenic 45.0%
! GGGTGGTGATCTTTTGAATG+AGG - tig0016170:10184-10203 Msa1357720:three_prime_UTR 45.0%
TGGTATGGTAAACCAGGCTT+TGG + tig0016170:10218-10237 Msa1357720:intergenic 45.0%
AGCCTGGTTTACCATACCAT+TGG - tig0016170:10219-10238 Msa1357720:three_prime_UTR 45.0%
AACCGTTCTTACCCTTCCAA+TGG + tig0016170:10238-10257 Msa1357720:intergenic 45.0%
! TTTACTGCGTTGGGTTGTCA+AGG - tig0016170:10258-10277 Msa1357720:intron 45.0%
!! TTGCTACATTTTGAGCGTCG+AGG + tig0016170:10304-10323 Msa1357720:intergenic 45.0%
CGATTGTGTGCGATTTAGGA+TGG - tig0016170:10425-10444 Msa1357720:intron 45.0%
!!! GGGCCCACAGTTTTAACTTT+TGG + tig0016170:10550-10569 Msa1357720:intergenic 45.0%
GTTAAGGTTTCTATACCCCG+AGG + tig0016170:12559-12578 Msa1357720:intergenic 45.0%
! GTTTGGTTTCACGGAACTAG+GGG + tig0016170:12825-12844 Msa1357720:intergenic 45.0%
! GAGTTTGGTTTCACGGAACT+AGG + tig0016170:12827-12846 Msa1357720:intergenic 45.0%
AGAGTGATAGTTGTTGGAGC+AGG - tig0016170:13810-13829 Msa1357720:intron 45.0%
GATGGAAAAGAAGGTGGGAA+TGG + tig0016170:13993-14012 Msa1357720:intergenic 45.0%
TCCTCTGTATCACAGAACAG+TGG - tig0016170:14076-14095 Msa1357720:intron 45.0%
TCCACTGTTCTGTGATACAG+AGG + tig0016170:14080-14099 Msa1357720:intergenic 45.0%
GGTGAGGTTGAGGAATATGA+AGG - tig0016170:14161-14180 Msa1357720:intron 45.0%
!!! AGGTTTTTGGTTGTGGCTAG+TGG - tig0016170:14185-14204 Msa1357720:intron 45.0%
!! CATGTTCTTGTTGTTGGGTC+TGG - tig0016170:14314-14333 Msa1357720:intron 45.0%
GTTGTTGGGTCTGGAAATTC+TGG - tig0016170:14323-14342 Msa1357720:intron 45.0%
! TGGGTCTGGAAATTCTGGAA+TGG - tig0016170:14328-14347 Msa1357720:intron 45.0%
CTTCCCCAATATTCCCTTCA+CGG - tig0016170:14803-14822 Msa1357720:intron 45.0%
CTTCCGTGAAGGGAATATTG+GGG + tig0016170:14809-14828 Msa1357720:intergenic 45.0%
CCTTCCGTGAAGGGAATATT+GGG + tig0016170:14810-14829 Msa1357720:intergenic 45.0%
ACCTTCCGTGAAGGGAATAT+TGG + tig0016170:14811-14830 Msa1357720:intergenic 45.0%
AATATTCCCTTCACGGAAGG+TGG - tig0016170:14810-14829 Msa1357720:intron 45.0%
ATCTTACCACCTTCCGTGAA+GGG + tig0016170:14819-14838 Msa1357720:intergenic 45.0%
AATCTTACCACCTTCCGTGA+AGG + tig0016170:14820-14839 Msa1357720:intergenic 45.0%
! TCAAGGGGCATGCTGAATTT+GGG - tig0016170:15179-15198 Msa1357720:CDS 45.0%
!! GGAGATGGTGGATTCAATGA+TGG - tig0016170:15229-15248 Msa1357720:intron 45.0%
ATATAAAAGGGACCCTCGCT+GGG + tig0016170:15308-15327 Msa1357720:intergenic 45.0%
! CGAGGGTCCCTTTTATATGA+AGG - tig0016170:15310-15329 Msa1357720:intron 45.0%
! CAAGTGAGGTACTTTGCAAG+GGG + tig0016170:16436-16455 Msa1357720:intergenic 45.0%
TGTTGTTGTGACGTGACGAA+TGG - tig0016170:16581-16600 Msa1357720:intron 45.0%
GTTGTTGTGACGTGACGAAT+GGG - tig0016170:16582-16601 Msa1357720:intron 45.0%
TCAAGAGATCTACCCACGAA+TGG - tig0016170:16725-16744 Msa1357720:intron 45.0%
ATCTACCCACGAATGGCTTA+AGG - tig0016170:16732-16751 Msa1357720:intron 45.0%
CCAAACCTTAAGCCATTCGT+GGG + tig0016170:16740-16759 Msa1357720:intergenic 45.0%
TCCAAACCTTAAGCCATTCG+TGG + tig0016170:16741-16760 Msa1357720:intergenic 45.0%
TTCCAATGAACGGGGTAACT+TGG + tig0016170:17709-17728 Msa1357720:intergenic 45.0%
AAGTTACCCCGTTCATTGGA+AGG - tig0016170:17708-17727 Msa1357720:intron 45.0%
AGTTACCCCGTTCATTGGAA+GGG - tig0016170:17709-17728 Msa1357720:intron 45.0%
TCTTTCCCTTCCAATGAACG+GGG + tig0016170:17717-17736 Msa1357720:intergenic 45.0%
TGTGTTGGACTATCAAGGAG+AGG - tig0016170:17748-17767 Msa1357720:intron 45.0%
! CGTTGATTAGATGCCAGTTG+AGG - tig0016170:17897-17916 Msa1357720:intron 45.0%
CGAGTTTCTCTAACCTCAAC+TGG + tig0016170:17913-17932 Msa1357720:intergenic 45.0%
!!! ATTTTATTTTTTTTTAATCT+TGG + tig0016170:7746-7765 Msa1357720:intergenic 5.0%
!!! TTATTAGTTTTTATTATATT+TGG + tig0016170:12737-12756 Msa1357720:intergenic 5.0%
!! AATAAAAACTAATAATAATT+TGG - tig0016170:12742-12761 Msa1357720:intron 5.0%
!!! CTTTTATATAATTTTTTTTA+TGG + tig0016170:13016-13035 Msa1357720:intergenic 5.0%
!! ATTATCATAAAAAAAAAAAT+AGG + tig0016170:13189-13208 Msa1357720:intergenic 5.0%
!!! TAAACTAATTAATTATTTTT+TGG - tig0016170:17641-17660 Msa1357720:intron 5.0%
ATGGGTCAGTTATTCCGGGA+CGG + tig0016170:7462-7481 Msa1357720:intergenic 50.0%
CCGGTGATAATAATCGGAGC+TGG - tig0016170:7785-7804 Msa1357720:intron 50.0%
TTAAGCAAGCTGCTGTGGCT+AGG + tig0016170:7820-7839 Msa1357720:intergenic 50.0%
CTCGTGTACCTGAGGTTGAA+GGG - tig0016170:8197-8216 Msa1357720:intron 50.0%
TGTACCTGAGGTTGAAGGGT+TGG - tig0016170:8201-8220 Msa1357720:intron 50.0%
AGACACGCAGATTCACGCTA+CGG + tig0016170:8626-8645 Msa1357720:intergenic 50.0%
!!! ACTGCGATTTTGGCTGAACG+TGG + tig0016170:9044-9063 Msa1357720:intergenic 50.0%
! ACTAGTTTCTCCACCGTGCT+TGG + tig0016170:9407-9426 Msa1357720:intergenic 50.0%
AAGCACGGTGGAGAAACTAG+TGG - tig0016170:9406-9425 Msa1357720:intron 50.0%
AACGGGCCTTCACTAGGAAA+AGG + tig0016170:9479-9498 Msa1357720:intergenic 50.0%
! GAGGATGGTTTTCCAAAGCC+TGG - tig0016170:10203-10222 Msa1357720:three_prime_UTR 50.0%
!! GTGCCGATTGTGTGCGATTT+AGG - tig0016170:10421-10440 Msa1357720:intron 50.0%
AGCATGGGGACTTCTCAATC+TGG - tig0016170:12139-12158 Msa1357720:intron 50.0%
CTACATGCGTAACCAGTCCT+CGG - tig0016170:12539-12558 Msa1357720:intron 50.0%
TACATGCGTAACCAGTCCTC+GGG - tig0016170:12540-12559 Msa1357720:intron 50.0%
GGCATGAGATTGCGTAGACT+AGG - tig0016170:12763-12782 Msa1357720:intron 50.0%
CTGCTACTGAGAGACCAGAA+GGG + tig0016170:13836-13855 Msa1357720:intergenic 50.0%
! GAAGGTGGGAATGGTTTGTG+AGG + tig0016170:13984-14003 Msa1357720:intergenic 50.0%
TAAGGATTCCGGTGAGGTTG+AGG - tig0016170:14151-14170 Msa1357720:intron 50.0%
CCCAATATTCCCTTCACGGA+AGG - tig0016170:14807-14826 Msa1357720:intron 50.0%
! GTCAAGGGGCATGCTGAATT+TGG - tig0016170:15178-15197 Msa1357720:CDS 50.0%
! CAAGGGGCATGCTGAATTTG+GGG - tig0016170:15180-15199 Msa1357720:CDS 50.0%
CATATAAAAGGGACCCTCGC+TGG + tig0016170:15309-15328 Msa1357720:intergenic 50.0%
GTGGGTAGATCTCTTGAAGC+CGG + tig0016170:16722-16741 Msa1357720:intergenic 50.0%
CCCACGAATGGCTTAAGGTT+TGG - tig0016170:16737-16756 Msa1357720:intron 50.0%
TGAACGGGGTAACTTGGCTT+GGG + tig0016170:17703-17722 Msa1357720:intergenic 50.0%
ATGAACGGGGTAACTTGGCT+TGG + tig0016170:17704-17723 Msa1357720:intergenic 50.0%
AGCCAAGTTACCCCGTTCAT+TGG - tig0016170:17704-17723 Msa1357720:intron 50.0%
AGGAGAGGTTTCTATGGAGC+TGG - tig0016170:17763-17782 Msa1357720:intron 50.0%
AGGTTTCTATGGAGCTGGTG+CGG - tig0016170:17768-17787 Msa1357720:intron 50.0%
GTACTATACTCCCTCCGTCC+CGG - tig0016170:7445-7464 Msa1357720:three_prime_UTR 55.0%
GTCAGTTATTCCGGGACGGA+GGG + tig0016170:7458-7477 Msa1357720:intergenic 55.0%
AGCTGAACCTCGTGTACCTG+AGG - tig0016170:8189-8208 Msa1357720:intron 55.0%
CCTTCAACCTCAGGTACACG+AGG + tig0016170:8199-8218 Msa1357720:intergenic 55.0%
CCTCGTGTACCTGAGGTTGA+AGG - tig0016170:8196-8215 Msa1357720:intron 55.0%
CTCTCCAACCCTTCAACCTC+AGG + tig0016170:8208-8227 Msa1357720:intergenic 55.0%
CTATCTGTCACCAAGCACGG+TGG - tig0016170:9394-9413 Msa1357720:intron 55.0%
ATGGTGAACGGGCCTTCACT+AGG + tig0016170:9485-9504 Msa1357720:intergenic 55.0%
! ACTGCGTTGGGTTGTCAAGG+AGG - tig0016170:10261-10280 Msa1357720:intron 55.0%
! CTGCGTTGGGTTGTCAAGGA+GGG - tig0016170:10262-10281 Msa1357720:intron 55.0%
! TGCGTTGGGTTGTCAAGGAG+GGG - tig0016170:10263-10282 Msa1357720:intron 55.0%
ACATGCGTAACCAGTCCTCG+GGG - tig0016170:12541-12560 Msa1357720:intron 55.0%
GGTTTCTATACCCCGAGGAC+TGG + tig0016170:12554-12573 Msa1357720:intergenic 55.0%
GCTGCTACTGAGAGACCAGA+AGG + tig0016170:13837-13856 Msa1357720:intergenic 55.0%
GGTCAGTTATTCCGGGACGG+AGG + tig0016170:7459-7478 Msa1357720:intergenic 60.0%
GTTGTTGGAGCAGGCCCTTC+TGG - tig0016170:13819-13838 Msa1357720:intron 60.0%
AAGGTCCGGGGTTCAAACCC+CGG - tig0016170:15682-15701 Msa1357720:intron 60.0%
GCAAGCTGCTGTGGCTAGGC+CGG + tig0016170:7816-7835 Msa1357720:intergenic 65.0%
!! TGGAGTTGGTAGGCCCAGCG+AGG - tig0016170:15292-15311 Msa1357720:intron 65.0%
!! GGAGTTGGTAGGCCCAGCGA+GGG - tig0016170:15293-15312 Msa1357720:intron 65.0%
GGTGGCCGGGGTTTGAACCC+CGG + tig0016170:15690-15709 Msa1357720:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0016170 gene 7269 18151 7269 ID=Msa1357720;Name=Msa1357720
tig0016170 mRNA 7269 18151 7269 ID=Msa1357720-mRNA-1;Parent=Msa1357720;Name=Msa1357720-mRNA-1;_AED=0.14;_eAED=0.14;_QI=7|0.6|0.45|1|0.6|0.45|11|1611|333
tig0016170 exon 7269 7753 7269 ID=Msa1357720-mRNA-1:exon:10483;Parent=Msa1357720-mRNA-1
tig0016170 exon 8667 8792 8667 ID=Msa1357720-mRNA-1:exon:10482;Parent=Msa1357720-mRNA-1
tig0016170 exon 10020 10253 10020 ID=Msa1357720-mRNA-1:exon:10481;Parent=Msa1357720-mRNA-1
tig0016170 exon 11011 11794 11011 ID=Msa1357720-mRNA-1:exon:10480;Parent=Msa1357720-mRNA-1
tig0016170 exon 15080 15235 15080 ID=Msa1357720-mRNA-1:exon:10479;Parent=Msa1357720-mRNA-1
tig0016170 exon 15396 15521 15396 ID=Msa1357720-mRNA-1:exon:10478;Parent=Msa1357720-mRNA-1
tig0016170 exon 15843 16076 15843 ID=Msa1357720-mRNA-1:exon:10477;Parent=Msa1357720-mRNA-1
tig0016170 exon 17036 17162 17036 ID=Msa1357720-mRNA-1:exon:10476;Parent=Msa1357720-mRNA-1
tig0016170 exon 17202 17397 17202 ID=Msa1357720-mRNA-1:exon:10475;Parent=Msa1357720-mRNA-1
tig0016170 exon 17503 17648 17503 ID=Msa1357720-mRNA-1:exon:10474;Parent=Msa1357720-mRNA-1
tig0016170 exon 18146 18151 18146 ID=Msa1357720-mRNA-1:exon:10473;Parent=Msa1357720-mRNA-1
tig0016170 five_prime_UTR 18146 18151 18146 ID=Msa1357720-mRNA-1:five_prime_utr;Parent=Msa1357720-mRNA-1
tig0016170 five_prime_UTR 17648 17648 17648 ID=Msa1357720-mRNA-1:five_prime_utr;Parent=Msa1357720-mRNA-1
tig0016170 CDS 17503 17647 17503 ID=Msa1357720-mRNA-1:cds;Parent=Msa1357720-mRNA-1
tig0016170 CDS 17202 17397 17202 ID=Msa1357720-mRNA-1:cds;Parent=Msa1357720-mRNA-1
tig0016170 CDS 17036 17162 17036 ID=Msa1357720-mRNA-1:cds;Parent=Msa1357720-mRNA-1
tig0016170 CDS 15843 16076 15843 ID=Msa1357720-mRNA-1:cds;Parent=Msa1357720-mRNA-1
tig0016170 CDS 15396 15521 15396 ID=Msa1357720-mRNA-1:cds;Parent=Msa1357720-mRNA-1
tig0016170 CDS 15080 15235 15080 ID=Msa1357720-mRNA-1:cds;Parent=Msa1357720-mRNA-1
tig0016170 CDS 11777 11794 11777 ID=Msa1357720-mRNA-1:cds;Parent=Msa1357720-mRNA-1
tig0016170 three_prime_UTR 11011 11776 11011 ID=Msa1357720-mRNA-1:three_prime_utr;Parent=Msa1357720-mRNA-1
tig0016170 three_prime_UTR 10020 10253 10020 ID=Msa1357720-mRNA-1:three_prime_utr;Parent=Msa1357720-mRNA-1
tig0016170 three_prime_UTR 8667 8792 8667 ID=Msa1357720-mRNA-1:three_prime_utr;Parent=Msa1357720-mRNA-1
tig0016170 three_prime_UTR 7269 7753 7269 ID=Msa1357720-mRNA-1:three_prime_utr;Parent=Msa1357720-mRNA-1
Gene Sequence

>Msa1357720

ATGCATGAAGCACCGGTGATAATAATCGGAGCTGGAACATCCGGCCTAGCCACAGCAGCTTGCTTAACAAAACAATCCATACCTTTCATCATTCTCGAAAGAGAAAACTGTTTTGCTTCTTTATGGCAAAACAACACCTACGATCGTAACTATGTCAACAACTTCAACATCAACCCTATATACAACAGAGCTGTTGAGTTAGCAGAGTATGTTGATGATGATGAGAAATGGAGGGTTAAAGCTGAGAATAAGAGTTCTGGTGAAGTTGAGGAGTATTCTGGAAGATTCTTGGTTGTTGCTAGTGGTGAAACAGCTGAACCTCGTGTACCTGAGGTTGAAGGGTACAAAAATGGAAAGGAGTTTAAAGATGAGCATGTTCTTGTTGTTGGTTCTGGTAATTCTGGTATGGAGATTGCTTTAGATTTGGCTAACTTTGGTGCTAAACCTTCAATCATTGTTAGAAGCCCGGTTCATTTTCTTTCTAGGGATATGATGTATTATGGGGGCGTTTTGTTTAACTATCTGTCACCAAGCACGGTGGAGAAACTAGTGGTGATAGCAAGCAGGATTGTGTATGGAGATCTGAGCAAATATGGTATACCTTTTCCTAGTGAAGGCCCGTTCACCATGAAGATGAAGTATGGCAAGTTTCCTATAATTGACGTGGGAACTGTCAAGAAAATCAAATCTGGAGAAATACAGGTGTTGCCAGCAGAAATAGAGAGCATAAGTGGTAACCAAGTGTTGTTCCGTGATGGAAAATCCTACCCATTTGACTCCATTATTTTCTGCACTGGTTTCAAGAGATCAACTCATAAATGGCTTAAGGGTGGTGATCTTTTGAATGAGGATGGTTTTCCAAAGCCTGGTTTACCATACCATTGGAAGGGTAAGAACGGTTTTTACTGCGTTGGGTTGTCAAGGAGGGGATTTTATGGAGCTAACCTCGACGCTCAAAATGTAGCAAATGATATTGCTATGCTGGATAAAAAACGGCAATAA

Protein sequence

>Msa1357720

MHEAPVIIIGAGTSGLATAACLTKQSIPFIILERENCFASLWQNNTYDRNYVNNFNINPIYNRAVELAEYVDDDEKWRVKAENKSSGEVEEYSGRFLVVASGETAEPRVPEVEGYKNGKEFKDEHVLVVGSGNSGMEIALDLANFGAKPSIIVRSPVHFLSRDMMYYGGVLFNYLSPSTVEKLVVIASRIVYGDLSKYGIPFPSEGPFTMKMKYGKFPIIDVGTVKKIKSGEIQVLPAEIESISGNQVLFRDGKSYPFDSIIFCTGFKRSTHKWLKGGDLLNEDGFPKPGLPYHWKGKNGFYCVGLSRRGFYGANLDAQNVANDIAMLDKKRQ*