AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0778060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0778060 MtrunA17_Chr5g0433601 98.618 434 6 0 1 434 1 434 0.0 884
Msa0778060 MtrunA17_Chr3g0095661 74.085 355 83 2 77 427 37 386 0.0 542
Msa0778060 MtrunA17_Chr5g0442671 73.714 350 81 4 87 431 42 385 0.0 530
Msa0778060 MtrunA17_Chr3g0121311 67.905 296 94 1 138 433 86 380 3.73e-155 444
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0778060 AT5G17230.2 69.142 431 113 6 2 429 4 417 0.0 595
Msa0778060 AT5G17230.1 69.142 431 113 6 2 429 4 417 0.0 595
Msa0778060 AT5G17230.4 69.142 431 113 6 2 429 4 417 0.0 595
Msa0778060 AT5G17230.3 66.816 446 113 7 2 429 4 432 0.0 585

Find 112 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCATTTCATTCTACAAAA+AGG 0.169857 5_2:-57835093 Msa0778060:five_prime_UTR
ATGGTATACTCGATTCTTTC+GGG 0.176386 5_2:-57834032 Msa0778060:CDS
CCTTCTATCATATCTTTAAA+TGG 0.198005 5_2:+57832428 None:intergenic
TCATGTCTGTGACATTATTA+AGG 0.208507 5_2:-57834092 Msa0778060:CDS
CCGAAAGGCGAAGAGCTATT+TGG 0.216155 5_2:-57833494 Msa0778060:CDS
TTCCCAGGCAAAACAATTTC+CGG 0.216388 5_2:+57833706 None:intergenic
CAAATAGCTCTTCGCCTTTC+GGG 0.239457 5_2:+57833495 None:intergenic
TCATGAAGAGCCAAATTAAA+AGG 0.246269 5_2:-57831881 Msa0778060:CDS
CCAAATAGCTCTTCGCCTTT+CGG 0.262524 5_2:+57833494 None:intergenic
TTTCTATGAAGAGAGTTTAA+TGG 0.275432 5_2:-57834205 Msa0778060:five_prime_UTR
GCTATTATATCGACAGATAT+TGG 0.277166 5_2:-57831079 Msa0778060:CDS
GACTAATTTGTAGTCAATAT+TGG 0.278179 5_2:-57830827 Msa0778060:three_prime_UTR
CTGTTGAAATTCTTTGTATA+TGG 0.282950 5_2:+57835119 None:intergenic
CACTAAATTCTCCACTCTTC+TGG 0.297134 5_2:+57835007 None:intergenic
TGCTTCCACTCCTAGCTTAG+AGG 0.306439 5_2:-57834067 Msa0778060:CDS
TTAATCACAGTTAGCTTTGC+TGG 0.322087 5_2:-57834307 Msa0778060:intron
TGGTAATGACAAACACAAAA+AGG 0.322521 5_2:-57830896 Msa0778060:three_prime_UTR
AATGGTATACTCGATTCTTT+CGG 0.323019 5_2:-57834033 Msa0778060:CDS
TGGTAAAGAAAGTAACTTCT+TGG 0.327130 5_2:+57830999 None:intergenic
CGAAAGGCGAAGAGCTATTT+GGG 0.355304 5_2:-57833493 Msa0778060:CDS
CTCTACTGTTACTATGTTGC+TGG 0.359851 5_2:-57832353 Msa0778060:CDS
CTTTAATCCAATAAAATCCT+TGG 0.360652 5_2:+57834271 None:intergenic
CCACTTGTCTGTCACCTTAC+CGG 0.360789 5_2:+57831911 None:intergenic
GCTGTAATATGTGAAGCATT+AGG 0.366470 5_2:+57832949 None:intergenic
CATGTCTGTGACATTATTAA+GGG 0.371237 5_2:-57834091 Msa0778060:CDS
AGATGACACAATGCAAAGTA+TGG 0.371885 5_2:-57835213 Msa0778060:five_prime_UTR
GGTTCTGAAGCAGGCGTCTT+TGG 0.372578 5_2:-57833770 Msa0778060:CDS
AGAGCTATTTGGGCGATATA+TGG 0.381849 5_2:-57833483 Msa0778060:intron
TCAGATGACGACATATTTGC+CGG 0.386677 5_2:-57831930 Msa0778060:CDS
ACTTGCATATGCTAGATCTA+TGG 0.394076 5_2:-57830977 Msa0778060:CDS
CTGTAATATGTGAAGCATTA+GGG 0.396810 5_2:+57832950 None:intergenic
ACATGAGATAACTTTGTTGA+TGG 0.406844 5_2:+57830949 None:intergenic
GTATCTACCACAAGATGAAT+TGG 0.407019 5_2:-57831967 Msa0778060:CDS
CAGATTTCCTGTTGATATCC+AGG 0.418869 5_2:-57832833 Msa0778060:intron
ATCAATACCTGGATATCAAC+AGG 0.418894 5_2:+57832826 None:intergenic
CAGAAGAGTGGAGAATTTAG+TGG 0.427449 5_2:-57835006 Msa0778060:five_prime_UTR
CAAGATGAATTGGCTCTGGC+AGG 0.432002 5_2:-57831957 Msa0778060:CDS
AGCAGGCGTCTTTGGTTAAG+AGG 0.432850 5_2:-57833762 Msa0778060:CDS
ATTACAACAATTTCACTAAG+AGG 0.435955 5_2:-57831038 Msa0778060:CDS
ATCGAGTATACCATTGGAAC+AGG 0.442296 5_2:+57834041 None:intergenic
CCATTTAAAGATATGATAGA+AGG 0.449064 5_2:-57832428 Msa0778060:CDS
TTATGATGTGGTTCTGAAGC+AGG 0.451633 5_2:-57833779 Msa0778060:CDS
CGGTGAACTTGAAGTGAAAC+CGG 0.459098 5_2:-57833725 Msa0778060:CDS
TACTATGTTGCTGGAACTGT+TGG 0.460078 5_2:-57832344 Msa0778060:CDS
TACAATGCTGCCTTGGCCTT+AGG 0.462846 5_2:-57832260 Msa0778060:CDS
TATGATAGAAGGAATGAGAA+TGG 0.470612 5_2:-57832417 Msa0778060:CDS
GGATAGGTGGGAATCAAGAT+TGG 0.482924 5_2:-57832917 Msa0778060:CDS
CTGGAAAAGTGGTGTTTCCA+AGG 0.483712 5_2:-57834288 Msa0778060:five_prime_UTR
GCAGCATCAAGCATATCAAA+TGG 0.485476 5_2:+57832874 None:intergenic
TTTAATGAGTGTTCCCGTCA+TGG 0.489200 5_2:-57832321 Msa0778060:CDS
TTTGAAGCTTGACCAATGTA+TGG 0.490072 5_2:+57835143 None:intergenic
TATGCGTGTGTTGGTCAGCC+TGG 0.491009 5_2:-57833892 Msa0778060:CDS
GGCTGTTTCGTCTGAGCAGA+AGG 0.495434 5_2:-57833803 Msa0778060:CDS
TTCAGTGTGGTGTAGGAGGA+CGG 0.496266 5_2:-57832989 Msa0778060:intron
AAGAGGAAGCTGAGCTCTAC+CGG 0.500218 5_2:-57833745 Msa0778060:CDS
TGCGTTGAAATGCCCATGAC+GGG 0.505460 5_2:+57832308 None:intergenic
TAGCTGATTTGCAATTCCTA+AGG 0.507538 5_2:+57832244 None:intergenic
GCATATCAAATGGACGCCCT+TGG 0.512063 5_2:+57832884 None:intergenic
CAGCCACTTCTCCTGCAGTC+GGG 0.512372 5_2:+57833821 None:intergenic
AGGACGGATGAACTTGTTGA+TGG 0.515418 5_2:-57832973 Msa0778060:CDS
ACCACAAGATGAATTGGCTC+TGG 0.516944 5_2:-57831961 Msa0778060:CDS
CATGAAGAGCCAAATTAAAA+GGG 0.517837 5_2:-57831880 Msa0778060:CDS
CGGTTTCACTTCAAGTTCAC+CGG 0.518111 5_2:+57833726 None:intergenic
TTAATGAGTGTTCCCGTCAT+GGG 0.520513 5_2:-57832320 Msa0778060:CDS
TGACGACATATTTGCCGGTA+AGG 0.527146 5_2:-57831925 Msa0778060:CDS
ATTTCATCATATACAAAATG+TGG 0.527430 5_2:+57830869 None:intergenic
TTACAACAATTTCACTAAGA+GGG 0.529341 5_2:-57831037 Msa0778060:CDS
AGTTAGCTTTGCTGGAAAAG+TGG 0.531406 5_2:-57834299 Msa0778060:five_prime_UTR
GTGCTCGCGAACCCGACTGC+AGG 0.534982 5_2:-57833832 Msa0778060:CDS
ACCAACATACTCAGAGATGT+TGG 0.536889 5_2:-57832221 Msa0778060:CDS
CAGCAACTGCAATGGATAGG+TGG 0.537534 5_2:-57832930 Msa0778060:CDS
GAAAGAATCGAGTATACCAT+TGG 0.546886 5_2:+57834035 None:intergenic
CTCAACAAACTCAAATTCCC+AGG 0.554708 5_2:+57833691 None:intergenic
AGCAACTGCAATGGATAGGT+GGG 0.555214 5_2:-57832929 Msa0778060:CDS
TAGATACACTCTTCCTCGCC+TGG 0.558995 5_2:+57831983 None:intergenic
CGAGCACATTCGATAACAAA+GGG 0.559386 5_2:+57833848 None:intergenic
TTACTAGCACTCTCTAAGCC+AGG 0.559394 5_2:+57833874 None:intergenic
GAAGTTAAGGTTAGCTAACA+AGG 0.561013 5_2:-57834149 Msa0778060:five_prime_UTR
ATTTGCAATTCCTAAGGCCA+AGG 0.562166 5_2:+57832250 None:intergenic
ACAGCCACTTCTCCTGCAGT+CGG 0.565483 5_2:+57833820 None:intergenic
TTAGAGGTCTCCTGTTCCAA+TGG 0.570133 5_2:-57834051 Msa0778060:CDS
GATATTAAGTATGCGTGTGT+TGG 0.573483 5_2:-57833901 Msa0778060:CDS
AGTGGGTCATATTATTCATG+AGG 0.576517 5_2:-57834988 Msa0778060:intron
GAGTGTGTACAATGCTGCCT+TGG 0.577004 5_2:-57832267 Msa0778060:CDS
CAATGAACAGAGCAGATGGC+CGG 0.577565 5_2:-57831814 Msa0778060:intron
GCCAGAGCCAATTCATCTTG+TGG 0.580658 5_2:+57831960 None:intergenic
ATCAACAGGAAATCTGTTGA+CGG 0.581442 5_2:+57832840 None:intergenic
TCCAACATCTCTGAGTATGT+TGG 0.584691 5_2:+57832220 None:intergenic
AGCTCAATGAACAGAGCAGA+TGG 0.586885 5_2:-57831818 Msa0778060:CDS
TTACAGCAACTGCAATGGAT+AGG 0.587244 5_2:-57832933 Msa0778060:CDS
ACATATTACAGCAACTGCAA+TGG 0.587371 5_2:-57832938 Msa0778060:CDS
AAGATGAATTGGCTCTGGCA+GGG 0.589323 5_2:-57831956 Msa0778060:CDS
GAACAGGAGACCTCTAAGCT+AGG 0.593065 5_2:+57834057 None:intergenic
ATGCGTTGAAATGCCCATGA+CGG 0.599114 5_2:+57832307 None:intergenic
TGGTATACTCGATTCTTTCG+GGG 0.602789 5_2:-57834031 Msa0778060:CDS
GAACCCGACTGCAGGAGAAG+TGG 0.603987 5_2:-57833824 Msa0778060:CDS
TGAGCAGAAGGTTTATGATG+TGG 0.604299 5_2:-57833791 Msa0778060:CDS
TGAGATAACTTTGTTGATGG+AGG 0.606078 5_2:+57830952 None:intergenic
GGAGACCTCTAAGCTAGGAG+TGG 0.607795 5_2:+57834062 None:intergenic
TGAGGCAGAAAAGGGAGTGA+CGG 0.617889 5_2:-57831841 Msa0778060:CDS
ATTGTACACACTCTCTGTTG+TGG 0.620184 5_2:+57832277 None:intergenic
CCGGTAAGGTGACAGACAAG+TGG 0.621228 5_2:-57831911 Msa0778060:CDS
ACAAGCAAACTCCAGAAGAG+TGG 0.625192 5_2:-57835018 Msa0778060:five_prime_UTR
GCGAGCACATTCGATAACAA+AGG 0.625781 5_2:+57833847 None:intergenic
AGAAGAGTGGAGAATTTAGT+GGG 0.630546 5_2:-57835005 Msa0778060:five_prime_UTR
CTCTTCTAATGACTCCCGAA+AGG 0.631131 5_2:-57833509 Msa0778060:CDS
TTTCCTAACAGTGCCAGGCG+AGG 0.637716 5_2:-57831996 Msa0778060:intron
AGTGAAGCATATGATAGATG+TGG 0.638875 5_2:-57833670 Msa0778060:CDS
TGAAACTCACAACCATACAT+TGG 0.648155 5_2:-57835155 Msa0778060:five_prime_UTR
ATAGATCTAGCATATGCAAG+TGG 0.656749 5_2:+57830979 None:intergenic
CATACTCAGAGATGTTGGAG+AGG 0.697210 5_2:-57832216 Msa0778060:CDS
GTAAGGTGACAGACAAGTGG+AGG 0.698008 5_2:-57831908 Msa0778060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAAAATAACTTC+TGG - chr5_2:57834461-57834480 Msa0778060:intron 10.0%
!! AAAATAAAAAAATAACTTCT+GGG - chr5_2:57834462-57834481 Msa0778060:intron 10.0%
!!! TAAATTACTAATCTTTTTAG+TGG - chr5_2:57831058-57831077 Msa0778060:CDS 15.0%
!!! GATTATGATAACAAATATTT+TGG - chr5_2:57832585-57832604 Msa0778060:intron 15.0%
!!! TAAATTTGTTAAGTTTTCAA+GGG - chr5_2:57832644-57832663 Msa0778060:intron 15.0%
!!! TTTAAAATAACTTACATACA+TGG - chr5_2:57832750-57832769 Msa0778060:intron 15.0%
!!! AAATTGATCTTTATTTATGT+AGG + chr5_2:57832929-57832948 None:intergenic 15.0%
!! TTTCATGTATATATCTAATT+TGG + chr5_2:57833226-57833245 None:intergenic 15.0%
!! AATCTATGTAAAAAAAACTT+AGG + chr5_2:57833909-57833928 None:intergenic 15.0%
!! TAGATTAAGAAATATAATGT+TGG - chr5_2:57833923-57833942 Msa0778060:CDS 15.0%
!! TCAAATTCTTATTATTGAAT+TGG - chr5_2:57834856-57834875 Msa0778060:intron 15.0%
!! GATATAGTTATTTAGAAAAA+TGG - chr5_2:57835098-57835117 Msa0778060:five_prime_UTR 15.0%
!!! ATTTTGTATATGATGAAATA+AGG - chr5_2:57835149-57835168 Msa0778060:five_prime_UTR 15.0%
!! TCATACATATGTTCAATTAA+TGG - chr5_2:57831116-57831135 Msa0778060:intron 20.0%
!! CTAACAAGTTCTTAATTTAA+AGG - chr5_2:57831288-57831307 Msa0778060:intron 20.0%
!! AAAAATTACATTAGTCACAT+AGG + chr5_2:57831394-57831413 None:intergenic 20.0%
!!! AGTATCATGGTTTTAAATTA+CGG + chr5_2:57831601-57831620 None:intergenic 20.0%
!!! TGAAATTTTATTGTTTGTGT+TGG - chr5_2:57831683-57831702 Msa0778060:intron 20.0%
!!! ATATGCTAAAACATTTTACT+TGG - chr5_2:57832382-57832401 Msa0778060:CDS 20.0%
!!! TATGCTAAAACATTTTACTT+GGG - chr5_2:57832383-57832402 Msa0778060:CDS 20.0%
!!! GTAAATTTGTTAAGTTTTCA+AGG - chr5_2:57832643-57832662 Msa0778060:intron 20.0%
!! TTCTTATAGACAACAAAAAT+TGG - chr5_2:57832820-57832839 Msa0778060:intron 20.0%
!! TTTGTATATACATCTGATTA+GGG + chr5_2:57832952-57832971 None:intergenic 20.0%
!! TTATATCTGAGGAAAAAAAA+TGG - chr5_2:57833430-57833449 Msa0778060:intron 20.0%
!! AGTAATCATTAAATAACTTC+TGG - chr5_2:57834425-57834444 Msa0778060:intron 20.0%
!! GTAATCATTAAATAACTTCT+GGG - chr5_2:57834426-57834445 Msa0778060:intron 20.0%
!! ATTTCATCATATACAAAATG+TGG + chr5_2:57835148-57835167 None:intergenic 20.0%
!!! TTTTGTTTGTCTTTTTGATT+TGG - chr5_2:57835225-57835244 Msa0778060:five_prime_UTR 20.0%
! CTGTTGAAATTCTTTGTATA+TGG + chr5_2:57830898-57830917 None:intergenic 25.0%
!! TTTTGTAGAATGAAATGGAA+TGG + chr5_2:57830921-57830940 None:intergenic 25.0%
! TTCCATTTCATTCTACAAAA+AGG - chr5_2:57830921-57830940 Msa0778060:three_prime_UTR 25.0%
! TCCATTTCATTCTACAAAAA+GGG - chr5_2:57830922-57830941 Msa0778060:three_prime_UTR 25.0%
!! CCACAATATAAAAGATTTTG+AGG + chr5_2:57831577-57831596 None:intergenic 25.0%
!! CCTCAAAATCTTTTATATTG+TGG - chr5_2:57831574-57831593 Msa0778060:intron 25.0%
! CTTTAATCCAATAAAATCCT+TGG + chr5_2:57831746-57831765 None:intergenic 25.0%
! TTTCTATGAAGAGAGTTTAA+TGG - chr5_2:57831809-57831828 Msa0778060:intron 25.0%
! ATTCATATTTGAGAAAAACG+AGG - chr5_2:57831843-57831862 Msa0778060:CDS 25.0%
! AGAATGATAAGAAAAAGACA+CGG - chr5_2:57832069-57832088 Msa0778060:intron 25.0%
! TATTATCTTTCCTTAAAGTG+AGG - chr5_2:57832415-57832434 Msa0778060:CDS 25.0%
! TAATTAACATCCTCACTTTA+AGG + chr5_2:57832428-57832447 None:intergenic 25.0%
! AGTGAGGATGTTAATTATTT+CGG - chr5_2:57832431-57832450 Msa0778060:CDS 25.0%
!! TGTTAATTATTTCGGTTTTG+TGG - chr5_2:57832439-57832458 Msa0778060:intron 25.0%
!! TGAGTTGAGTCAATTTATAT+TGG - chr5_2:57832464-57832483 Msa0778060:intron 25.0%
! GAGTTGAGTCAATTTATATT+GGG - chr5_2:57832465-57832484 Msa0778060:intron 25.0%
! AAAATGAACTTAGTACATGA+CGG + chr5_2:57832886-57832905 None:intergenic 25.0%
! CTTTGTATATACATCTGATT+AGG + chr5_2:57832953-57832972 None:intergenic 25.0%
!! TCCTCTAAACTTTAGAAAAT+AGG - chr5_2:57832984-57833003 Msa0778060:CDS 25.0%
!! CCTCTAAACTTTAGAAAATA+GGG - chr5_2:57832985-57833004 Msa0778060:CDS 25.0%
! GAACAAAATTAATCAATACC+TGG + chr5_2:57833202-57833221 None:intergenic 25.0%
! GTAGAAAACAACATTAAAGA+TGG + chr5_2:57833250-57833269 None:intergenic 25.0%
!!! AATGTTGTTTTCTACTTGAA+AGG - chr5_2:57833255-57833274 Msa0778060:intron 25.0%
! TCCACAAAATCATTATATGT+GGG + chr5_2:57833339-57833358 None:intergenic 25.0%
! TTCCACAAAATCATTATATG+TGG + chr5_2:57833340-57833359 None:intergenic 25.0%
! ATCGACAAAAACAAAAGATT+AGG + chr5_2:57833562-57833581 None:intergenic 25.0%
! CCTTCTATCATATCTTTAAA+TGG + chr5_2:57833589-57833608 None:intergenic 25.0%
! CCATTTAAAGATATGATAGA+AGG - chr5_2:57833586-57833605 Msa0778060:intron 25.0%
!!! AGGTTTTGTATAATGATGTT+TGG + chr5_2:57834238-57834257 None:intergenic 25.0%
! ATTATACAAAACCTTCTTTG+TGG - chr5_2:57834244-57834263 Msa0778060:five_prime_UTR 25.0%
! TATATGTAAGTGTGTATAGA+TGG - chr5_2:57834292-57834311 Msa0778060:five_prime_UTR 25.0%
! ATTACAACAATTTCACTAAG+AGG - chr5_2:57834976-57834995 Msa0778060:intron 25.0%
! TTACAACAATTTCACTAAGA+GGG - chr5_2:57834977-57834996 Msa0778060:intron 25.0%
!! GACTAATTTGTAGTCAATAT+TGG - chr5_2:57835187-57835206 Msa0778060:five_prime_UTR 25.0%
! ACCCTTTTTGTAGAATGAAA+TGG + chr5_2:57830926-57830945 None:intergenic 30.0%
GTATGAAAACATCAACATCA+TGG + chr5_2:57831102-57831121 None:intergenic 30.0%
TAATGGCAAATTCATCTAAG+TGG - chr5_2:57831133-57831152 Msa0778060:intron 30.0%
AATGGCAAATTCATCTAAGT+GGG - chr5_2:57831134-57831153 Msa0778060:intron 30.0%
CACAGAAAAACAACTTTGTT+GGG + chr5_2:57831185-57831204 None:intergenic 30.0%
AGTAGTAGTAACATGAAACA+AGG + chr5_2:57831219-57831238 None:intergenic 30.0%
!!! TTCGTCATGGTTTTAAATTG+CGG - chr5_2:57831462-57831481 Msa0778060:intron 30.0%
TCATCATACAACAAGTATCA+TGG + chr5_2:57831614-57831633 None:intergenic 30.0%
! AGAGTTTAATGGTTTTCTCA+AGG - chr5_2:57831820-57831839 Msa0778060:CDS 30.0%
TCATGTCTGTGACATTATTA+AGG - chr5_2:57831922-57831941 Msa0778060:CDS 30.0%
CATGTCTGTGACATTATTAA+GGG - chr5_2:57831923-57831942 Msa0778060:CDS 30.0%
AATGGTATACTCGATTCTTT+CGG - chr5_2:57831981-57832000 Msa0778060:CDS 30.0%
!!! CCCTATTTTCTAAAGTTTAG+AGG + chr5_2:57832988-57833007 None:intergenic 30.0%
! CTGTAATATGTGAAGCATTA+GGG + chr5_2:57833067-57833086 None:intergenic 30.0%
CCACAAAATCATTATATGTG+GGG + chr5_2:57833338-57833357 None:intergenic 30.0%
TGCAAAGAACATTATATCTG+AGG - chr5_2:57833419-57833438 Msa0778060:intron 30.0%
TATGATAGAAGGAATGAGAA+TGG - chr5_2:57833597-57833616 Msa0778060:intron 30.0%
GAAATGAAGTGAACAAACAT+CGG + chr5_2:57833840-57833859 None:intergenic 30.0%
ACTTAGGACGAAAGTTATTA+TGG + chr5_2:57833893-57833912 None:intergenic 30.0%
! ATTGTTTAGTTTAGCAACAG+AGG + chr5_2:57833954-57833973 None:intergenic 30.0%
GGAAAATTGAGCATATGATA+AGG + chr5_2:57834003-57834022 None:intergenic 30.0%
TCATGAAGAGCCAAATTAAA+AGG - chr5_2:57834133-57834152 Msa0778060:five_prime_UTR 30.0%
CATGAAGAGCCAAATTAAAA+GGG - chr5_2:57834134-57834153 Msa0778060:five_prime_UTR 30.0%
!!! TTTTTTGATGAGGCAGAAAA+GGG - chr5_2:57834165-57834184 Msa0778060:five_prime_UTR 30.0%
TGTTTGGTTGAATTTCTTAC+CGG + chr5_2:57834222-57834241 None:intergenic 30.0%
!! ATTTTAGTATGTGACGCAAA+AGG - chr5_2:57834880-57834899 Msa0778060:intron 30.0%
! TTTTAGTATGTGACGCAAAA+GGG - chr5_2:57834881-57834900 Msa0778060:intron 30.0%
GCTATTATATCGACAGATAT+TGG - chr5_2:57834935-57834954 Msa0778060:intron 30.0%
TGGTAAAGAAAGTAACTTCT+TGG + chr5_2:57835018-57835037 None:intergenic 30.0%
ACATGAGATAACTTTGTTGA+TGG + chr5_2:57835068-57835087 None:intergenic 30.0%
! TGGTAATGACAAACACAAAA+AGG - chr5_2:57835118-57835137 Msa0778060:five_prime_UTR 30.0%
AGATGACACAATGCAAAGTA+TGG - chr5_2:57830801-57830820 Msa0778060:three_prime_UTR 35.0%
TGAAACTCACAACCATACAT+TGG - chr5_2:57830859-57830878 Msa0778060:three_prime_UTR 35.0%
! TTTGAAGCTTGACCAATGTA+TGG + chr5_2:57830874-57830893 None:intergenic 35.0%
AGAAGAGTGGAGAATTTAGT+GGG - chr5_2:57831009-57831028 Msa0778060:CDS 35.0%
AGTGGGTCATATTATTCATG+AGG - chr5_2:57831026-57831045 Msa0778060:CDS 35.0%
CATGGAGCAAAAACTAACAA+TGG + chr5_2:57831084-57831103 None:intergenic 35.0%
ACAACTTTGTTGGGTGTTAA+TGG + chr5_2:57831176-57831195 None:intergenic 35.0%
GCACAGAAAAACAACTTTGT+TGG + chr5_2:57831186-57831205 None:intergenic 35.0%
!! CTACTACTTGCTCATTTTTG+TGG - chr5_2:57831234-57831253 Msa0778060:intron 35.0%
TTAGTACTCACAAAGCTACA+CGG + chr5_2:57831272-57831291 None:intergenic 35.0%
TGCTGATGTTGTTGAAATTG+TGG - chr5_2:57831525-57831544 Msa0778060:intron 35.0%
!! TTAATCACAGTTAGCTTTGC+TGG - chr5_2:57831707-57831726 Msa0778060:intron 35.0%
! GGTGTTTCCAAGGATTTTAT+TGG - chr5_2:57831736-57831755 Msa0778060:intron 35.0%
! CTTTGCTTGTGTTTTCAACT+GGG - chr5_2:57831783-57831802 Msa0778060:intron 35.0%
TGAGAAAAACGAGGAAGTTA+AGG - chr5_2:57831852-57831871 Msa0778060:CDS 35.0%
! GAAGTTAAGGTTAGCTAACA+AGG - chr5_2:57831865-57831884 Msa0778060:CDS 35.0%
GAAAGAATCGAGTATACCAT+TGG + chr5_2:57831982-57832001 None:intergenic 35.0%
ATGGTATACTCGATTCTTTC+GGG - chr5_2:57831982-57832001 Msa0778060:CDS 35.0%
GATATTAAGTATGCGTGTGT+TGG - chr5_2:57832113-57832132 Msa0778060:intron 35.0%
AGTGAAGCATATGATAGATG+TGG - chr5_2:57832344-57832363 Msa0778060:CDS 35.0%
! ATATTGGGTTCTTTTCTCTC+AGG - chr5_2:57832480-57832499 Msa0778060:intron 35.0%
!! TACAGGACAGTTTTTGCTAT+AGG - chr5_2:57832691-57832710 Msa0778060:intron 35.0%
AACTTGTAGCCAATTCCATT+TGG - chr5_2:57832848-57832867 Msa0778060:CDS 35.0%
!!! ATACTACTGCTTTTTCAGTG+TGG - chr5_2:57833012-57833031 Msa0778060:intron 35.0%
! GCTGTAATATGTGAAGCATT+AGG + chr5_2:57833068-57833087 None:intergenic 35.0%
ACATATTACAGCAACTGCAA+TGG - chr5_2:57833076-57833095 Msa0778060:intron 35.0%
ATCAACAGGAAATCTGTTGA+CGG + chr5_2:57833177-57833196 None:intergenic 35.0%
ATCAATACCTGGATATCAAC+AGG + chr5_2:57833191-57833210 None:intergenic 35.0%
TCATTATATGTGGGGACAAA+AGG + chr5_2:57833330-57833349 None:intergenic 35.0%
! CCCCACATATAATGATTTTG+TGG - chr5_2:57833335-57833354 Msa0778060:intron 35.0%
ATCTGAGGAAAAAAAATGGC+AGG - chr5_2:57833434-57833453 Msa0778060:intron 35.0%
GATAAATCCTCTAACACTGA+AGG + chr5_2:57833540-57833559 None:intergenic 35.0%
!! TAGCTGATTTGCAATTCCTA+AGG + chr5_2:57833773-57833792 None:intergenic 35.0%
!! AATGACCCTGCATTTGATTT+TGG - chr5_2:57833971-57833990 Msa0778060:CDS 35.0%
TGAAGCCAAAATCAAATGCA+GGG + chr5_2:57833979-57833998 None:intergenic 35.0%
ATGAAGCCAAAATCAAATGC+AGG + chr5_2:57833980-57833999 None:intergenic 35.0%
GTATCTACCACAAGATGAAT+TGG - chr5_2:57834047-57834066 Msa0778060:CDS 35.0%
!!! GTTTTTTGATGAGGCAGAAA+AGG - chr5_2:57834164-57834183 Msa0778060:five_prime_UTR 35.0%
! CAATTTTTCACAAGTAGAGG+AGG + chr5_2:57834724-57834743 None:intergenic 35.0%
CTCCTCTACTTGTGAAAAAT+TGG - chr5_2:57834722-57834741 Msa0778060:intron 35.0%
! CACCAATTTTTCACAAGTAG+AGG + chr5_2:57834727-57834746 None:intergenic 35.0%
CTCTACTTGTGAAAAATTGG+TGG - chr5_2:57834725-57834744 Msa0778060:intron 35.0%
! TGTGAAAAATTGGTGGCTTA+AGG - chr5_2:57834732-57834751 Msa0778060:intron 35.0%
ATTTGAACTTGTAACCTCGA+GGG + chr5_2:57834842-57834861 None:intergenic 35.0%
AATTTGAACTTGTAACCTCG+AGG + chr5_2:57834843-57834862 None:intergenic 35.0%
ATAGATCTAGCATATGCAAG+TGG + chr5_2:57835038-57835057 None:intergenic 35.0%
ACTTGCATATGCTAGATCTA+TGG - chr5_2:57835037-57835056 Msa0778060:five_prime_UTR 35.0%
! TGAGATAACTTTGTTGATGG+AGG + chr5_2:57835065-57835084 None:intergenic 35.0%
CACTAAATTCTCCACTCTTC+TGG + chr5_2:57831010-57831029 None:intergenic 40.0%
CAGAAGAGTGGAGAATTTAG+TGG - chr5_2:57831008-57831027 Msa0778060:CDS 40.0%
ATGACGAAAGACACACAATG+GGG + chr5_2:57831450-57831469 None:intergenic 40.0%
CATGACGAAAGACACACAAT+GGG + chr5_2:57831451-57831470 None:intergenic 40.0%
!!! AGATTTTGAGGTCTCAGCAA+TGG + chr5_2:57831565-57831584 None:intergenic 40.0%
!! AGTTAGCTTTGCTGGAAAAG+TGG - chr5_2:57831715-57831734 Msa0778060:intron 40.0%
! GCTTTGCTTGTGTTTTCAAC+TGG - chr5_2:57831782-57831801 Msa0778060:intron 40.0%
ATCGAGTATACCATTGGAAC+AGG + chr5_2:57831976-57831995 None:intergenic 40.0%
TGGTATACTCGATTCTTTCG+GGG - chr5_2:57831983-57832002 Msa0778060:CDS 40.0%
CGAGCACATTCGATAACAAA+GGG + chr5_2:57832169-57832188 None:intergenic 40.0%
TGAGCAGAAGGTTTATGATG+TGG - chr5_2:57832223-57832242 Msa0778060:CDS 40.0%
!! TTATGATGTGGTTCTGAAGC+AGG - chr5_2:57832235-57832254 Msa0778060:CDS 40.0%
!! AAACCGGAAATTGTTTTGCC+TGG - chr5_2:57832305-57832324 Msa0778060:CDS 40.0%
!! AACCGGAAATTGTTTTGCCT+GGG - chr5_2:57832306-57832325 Msa0778060:CDS 40.0%
TTCCCAGGCAAAACAATTTC+CGG + chr5_2:57832311-57832330 None:intergenic 40.0%
CTCAACAAACTCAAATTCCC+AGG + chr5_2:57832326-57832345 None:intergenic 40.0%
AGAGCTATTTGGGCGATATA+TGG - chr5_2:57832531-57832550 Msa0778060:intron 40.0%
GGTGAGTGATCATGCTTATA+TGG - chr5_2:57832552-57832571 Msa0778060:intron 40.0%
TGTTCGACAAGTTCATCTAC+AGG - chr5_2:57832674-57832693 Msa0778060:intron 40.0%
GACGCATAACCAAATGGAAT+TGG + chr5_2:57832860-57832879 None:intergenic 40.0%
TTACAGCAACTGCAATGGAT+AGG - chr5_2:57833081-57833100 Msa0778060:intron 40.0%
! AGATTGGACGAACTTTTCCA+AGG - chr5_2:57833113-57833132 Msa0778060:intron 40.0%
! GATTGGACGAACTTTTCCAA+GGG - chr5_2:57833114-57833133 Msa0778060:intron 40.0%
GCAGCATCAAGCATATCAAA+TGG + chr5_2:57833143-57833162 None:intergenic 40.0%
CAGATTTCCTGTTGATATCC+AGG - chr5_2:57833181-57833200 Msa0778060:intron 40.0%
CTCTACTGTTACTATGTTGC+TGG - chr5_2:57833661-57833680 Msa0778060:CDS 40.0%
TACTATGTTGCTGGAACTGT+TGG - chr5_2:57833670-57833689 Msa0778060:CDS 40.0%
TTTAATGAGTGTTCCCGTCA+TGG - chr5_2:57833693-57833712 Msa0778060:CDS 40.0%
TTAATGAGTGTTCCCGTCAT+GGG - chr5_2:57833694-57833713 Msa0778060:CDS 40.0%
ATTGTACACACTCTCTGTTG+TGG + chr5_2:57833740-57833759 None:intergenic 40.0%
ATTTGCAATTCCTAAGGCCA+AGG + chr5_2:57833767-57833786 None:intergenic 40.0%
ACCAACATACTCAGAGATGT+TGG - chr5_2:57833793-57833812 Msa0778060:CDS 40.0%
TCCAACATCTCTGAGTATGT+TGG + chr5_2:57833797-57833816 None:intergenic 40.0%
! TCAATTTTCCTAACAGTGCC+AGG - chr5_2:57834013-57834032 Msa0778060:CDS 40.0%
TCAGATGACGACATATTTGC+CGG - chr5_2:57834084-57834103 Msa0778060:CDS 40.0%
!! ACGTTCTCGCCCTTTTAATT+TGG + chr5_2:57834146-57834165 None:intergenic 40.0%
GAAAACTTCAGCCACAAAGA+AGG + chr5_2:57834258-57834277 None:intergenic 40.0%
GATTTGAATTTCATCCCTCG+AGG - chr5_2:57834825-57834844 Msa0778060:intron 40.0%
ACAAGCAAACTCCAGAAGAG+TGG - chr5_2:57830996-57831015 Msa0778060:CDS 45.0%
CCATGACGAAAGACACACAA+TGG + chr5_2:57831452-57831471 None:intergenic 45.0%
CCATTGTGTGTCTTTCGTCA+TGG - chr5_2:57831449-57831468 Msa0778060:intron 45.0%
CTGGAAAAGTGGTGTTTCCA+AGG - chr5_2:57831726-57831745 Msa0778060:intron 45.0%
TTAGAGGTCTCCTGTTCCAA+TGG - chr5_2:57831963-57831982 Msa0778060:CDS 45.0%
TTACTAGCACTCTCTAAGCC+AGG + chr5_2:57832143-57832162 None:intergenic 45.0%
GCGAGCACATTCGATAACAA+AGG + chr5_2:57832170-57832189 None:intergenic 45.0%
! CGGTTTCACTTCAAGTTCAC+CGG + chr5_2:57832291-57832310 None:intergenic 45.0%
CGGTGAACTTGAAGTGAAAC+CGG - chr5_2:57832289-57832308 Msa0778060:CDS 45.0%
CTCTTCTAATGACTCCCGAA+AGG - chr5_2:57832505-57832524 Msa0778060:intron 45.0%
CAAATAGCTCTTCGCCTTTC+GGG + chr5_2:57832522-57832541 None:intergenic 45.0%
CCAAATAGCTCTTCGCCTTT+CGG + chr5_2:57832523-57832542 None:intergenic 45.0%
CGAAAGGCGAAGAGCTATTT+GGG - chr5_2:57832521-57832540 Msa0778060:intron 45.0%
CGGTATGACGCATAACCAAA+TGG + chr5_2:57832866-57832885 None:intergenic 45.0%
!!! CTGCTTTTTCAGTGTGGTGT+AGG - chr5_2:57833018-57833037 Msa0778060:intron 45.0%
!!! CTTTTTCAGTGTGGTGTAGG+AGG - chr5_2:57833021-57833040 Msa0778060:intron 45.0%
!! AGGACGGATGAACTTGTTGA+TGG - chr5_2:57833041-57833060 Msa0778060:intron 45.0%
AGCAACTGCAATGGATAGGT+GGG - chr5_2:57833085-57833104 Msa0778060:intron 45.0%
GGATAGGTGGGAATCAAGAT+TGG - chr5_2:57833097-57833116 Msa0778060:intron 45.0%
TCTACTTGAAAGGCAACGAG+TGG - chr5_2:57833265-57833284 Msa0778060:intron 45.0%
ATGTTCGCCTTCAGTGTTAG+AGG - chr5_2:57833530-57833549 Msa0778060:intron 45.0%
ATGCGTTGAAATGCCCATGA+CGG + chr5_2:57833710-57833729 None:intergenic 45.0%
CATACTCAGAGATGTTGGAG+AGG - chr5_2:57833798-57833817 Msa0778060:CDS 45.0%
! ACCACAAGATGAATTGGCTC+TGG - chr5_2:57834053-57834072 Msa0778060:CDS 45.0%
!! AAGATGAATTGGCTCTGGCA+GGG - chr5_2:57834058-57834077 Msa0778060:CDS 45.0%
TGACGACATATTTGCCGGTA+AGG - chr5_2:57834089-57834108 Msa0778060:CDS 45.0%
!!! GGCGAGAACGTTTTTTGATG+AGG - chr5_2:57834155-57834174 Msa0778060:five_prime_UTR 45.0%
AGCTCAATGAACAGAGCAGA+TGG - chr5_2:57834196-57834215 Msa0778060:five_prime_UTR 45.0%
!!! TGTGACGCAAAAGGGTGTTT+TGG - chr5_2:57834889-57834908 Msa0778060:intron 45.0%
!!! AAGGGTGTTTTGGATGTTGC+AGG - chr5_2:57834899-57834918 Msa0778060:intron 45.0%
!! TGTTTTGGATGTTGCAGGTG+TGG - chr5_2:57834904-57834923 Msa0778060:intron 45.0%
!! GTTTTGGATGTTGCAGGTGT+GGG - chr5_2:57834905-57834924 Msa0778060:intron 45.0%
!!! TTTTTTTATTTTTTTTTTGA+AGG + chr5_2:57834454-57834473 None:intergenic 5.0%
TGCTTCCACTCCTAGCTTAG+AGG - chr5_2:57831947-57831966 Msa0778060:CDS 50.0%
GAACAGGAGACCTCTAAGCT+AGG + chr5_2:57831960-57831979 None:intergenic 50.0%
AGCAGGCGTCTTTGGTTAAG+AGG - chr5_2:57832252-57832271 Msa0778060:CDS 50.0%
AAGAGGAAGCTGAGCTCTAC+CGG - chr5_2:57832269-57832288 Msa0778060:CDS 50.0%
CCGAAAGGCGAAGAGCTATT+TGG - chr5_2:57832520-57832539 Msa0778060:intron 50.0%
TTCAGTGTGGTGTAGGAGGA+CGG - chr5_2:57833025-57833044 Msa0778060:intron 50.0%
CAGCAACTGCAATGGATAGG+TGG - chr5_2:57833084-57833103 Msa0778060:intron 50.0%
GCATATCAAATGGACGCCCT+TGG + chr5_2:57833133-57833152 None:intergenic 50.0%
AACTTTCCTGCAACCAGCCT+AGG - chr5_2:57833302-57833321 Msa0778060:intron 50.0%
TGTGGGGACAAAAGGAACCT+AGG + chr5_2:57833322-57833341 None:intergenic 50.0%
TGCGTTGAAATGCCCATGAC+GGG + chr5_2:57833709-57833728 None:intergenic 50.0%
GAGTGTGTACAATGCTGCCT+TGG - chr5_2:57833747-57833766 Msa0778060:CDS 50.0%
! TACAATGCTGCCTTGGCCTT+AGG - chr5_2:57833754-57833773 Msa0778060:CDS 50.0%
TAGATACACTCTTCCTCGCC+TGG + chr5_2:57834034-57834053 None:intergenic 50.0%
GCCAGAGCCAATTCATCTTG+TGG + chr5_2:57834057-57834076 None:intergenic 50.0%
!! CAAGATGAATTGGCTCTGGC+AGG - chr5_2:57834057-57834076 Msa0778060:CDS 50.0%
CCACTTGTCTGTCACCTTAC+CGG + chr5_2:57834106-57834125 None:intergenic 50.0%
GTAAGGTGACAGACAAGTGG+AGG - chr5_2:57834106-57834125 Msa0778060:exon 50.0%
TGAGGCAGAAAAGGGAGTGA+CGG - chr5_2:57834173-57834192 Msa0778060:five_prime_UTR 50.0%
CAATGAACAGAGCAGATGGC+CGG - chr5_2:57834200-57834219 Msa0778060:five_prime_UTR 50.0%
GGAGACCTCTAAGCTAGGAG+TGG + chr5_2:57831955-57831974 None:intergenic 55.0%
! TATGCGTGTGTTGGTCAGCC+TGG - chr5_2:57832122-57832141 Msa0778060:intron 55.0%
ACAGCCACTTCTCCTGCAGT+CGG + chr5_2:57832197-57832216 None:intergenic 55.0%
! GGCTGTTTCGTCTGAGCAGA+AGG - chr5_2:57832211-57832230 Msa0778060:intron 55.0%
!! GGTTCTGAAGCAGGCGTCTT+TGG - chr5_2:57832244-57832263 Msa0778060:CDS 55.0%
! AAGGAACCTAGGCTGGTTGC+AGG + chr5_2:57833311-57833330 None:intergenic 55.0%
GGGACAAAAGGAACCTAGGC+TGG + chr5_2:57833318-57833337 None:intergenic 55.0%
TTTCCTAACAGTGCCAGGCG+AGG - chr5_2:57834018-57834037 Msa0778060:CDS 55.0%
CCGGTAAGGTGACAGACAAG+TGG - chr5_2:57834103-57834122 Msa0778060:exon 55.0%
GAACCCGACTGCAGGAGAAG+TGG - chr5_2:57832190-57832209 Msa0778060:intron 60.0%
CAGCCACTTCTCCTGCAGTC+GGG + chr5_2:57832196-57832215 None:intergenic 60.0%
CTTCCTCGCCTGGCACTGTT+AGG + chr5_2:57834024-57834043 None:intergenic 60.0%
GTGCTCGCGAACCCGACTGC+AGG - chr5_2:57832182-57832201 Msa0778060:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 57830788 57835248 57830788 ID=Msa0778060;Name=Msa0778060
chr5_2 mRNA 57830788 57835248 57830788 ID=Msa0778060-mRNA-1;Parent=Msa0778060;Name=Msa0778060-mRNA-1;_AED=0.21;_eAED=0.21;_QI=467|1|1|1|0.83|0.85|7|157|434
chr5_2 exon 57830788 57831115 57830788 ID=Msa0778060-mRNA-1:exon:17098;Parent=Msa0778060-mRNA-1
chr5_2 exon 57831815 57832007 57831815 ID=Msa0778060-mRNA-1:exon:17097;Parent=Msa0778060-mRNA-1
chr5_2 exon 57832215 57832450 57832215 ID=Msa0778060-mRNA-1:exon:17096;Parent=Msa0778060-mRNA-1
chr5_2 exon 57832834 57833006 57832834 ID=Msa0778060-mRNA-1:exon:17095;Parent=Msa0778060-mRNA-1
chr5_2 exon 57833484 57833534 57833484 ID=Msa0778060-mRNA-1:exon:17094;Parent=Msa0778060-mRNA-1
chr5_2 exon 57833632 57834319 57833632 ID=Msa0778060-mRNA-1:exon:17093;Parent=Msa0778060-mRNA-1
chr5_2 exon 57834989 57835248 57834989 ID=Msa0778060-mRNA-1:exon:17092;Parent=Msa0778060-mRNA-1
chr5_2 five_prime_UTR 57834989 57835248 57834989 ID=Msa0778060-mRNA-1:five_prime_utr;Parent=Msa0778060-mRNA-1
chr5_2 five_prime_UTR 57834113 57834319 57834113 ID=Msa0778060-mRNA-1:five_prime_utr;Parent=Msa0778060-mRNA-1
chr5_2 CDS 57833632 57834112 57833632 ID=Msa0778060-mRNA-1:cds;Parent=Msa0778060-mRNA-1
chr5_2 CDS 57833484 57833534 57833484 ID=Msa0778060-mRNA-1:cds;Parent=Msa0778060-mRNA-1
chr5_2 CDS 57832834 57833006 57832834 ID=Msa0778060-mRNA-1:cds;Parent=Msa0778060-mRNA-1
chr5_2 CDS 57832215 57832450 57832215 ID=Msa0778060-mRNA-1:cds;Parent=Msa0778060-mRNA-1
chr5_2 CDS 57831815 57832007 57831815 ID=Msa0778060-mRNA-1:cds;Parent=Msa0778060-mRNA-1
chr5_2 CDS 57830945 57831115 57830945 ID=Msa0778060-mRNA-1:cds;Parent=Msa0778060-mRNA-1
chr5_2 three_prime_UTR 57830788 57830944 57830788 ID=Msa0778060-mRNA-1:three_prime_utr;Parent=Msa0778060-mRNA-1
Gene Sequence

>Msa0778060

ATGTCTGTGACATTATTAAGGGTTGCTTCCACTCCTAGCTTAGAGGTCTCCTGTTCCAATGGTATACTCGATTCTTTCGGGGTTGTGAAGCTTGTAGATTCTTCGAAGTTCTTGTCTAGAGACTCTGTGTCAATAAGAGCAAAAAAGAATGATAAGAAAAAGACACGGAGATTTTGCTCATTGAGTACAGATATTAAGTATGCGTGTGTTGGTCAGCCTGGCTTAGAGAGTGCTAGTAACTTCCCTTTGTTATCGAATGTGCTCGCGAACCCGACTGCAGGAGAAGTGGCTGTTTCGTCTGAGCAGAAGGTTTATGATGTGGTTCTGAAGCAGGCGTCTTTGGTTAAGAGGAAGCTGAGCTCTACCGGTGAACTTGAAGTGAAACCGGAAATTGTTTTGCCTGGGAATTTGAGTTTGTTGAGTGAAGCATATGATAGATGTGGAGAAATTTGTGCAGAATATGCTAAAACATTTTACTTGGGAACTCTTCTAATGACTCCCGAAAGGCGAAGAGCTATTTGGGCGATATATGTGTGGTGTAGGAGGACGGATGAACTTGTTGATGGCCCTAATGCTTCACATATTACAGCAACTGCAATGGATAGGTGGGAATCAAGATTGGACGAACTTTTCCAAGGGCGTCCATTTGATATGCTTGATGCTGCTTTATCAGATACCGTCAACAGATTTCCTGTTGATATCCAGCCATTTAAAGATATGATAGAAGGAATGAGAATGGATCTTAAGAAGTCGAGATACAAAAGCTTTGATGAACTATATCTCTACTGTTACTATGTTGCTGGAACTGTTGGTTTAATGAGTGTTCCCGTCATGGGCATTTCAACGCATTCGCAAGCCACAACAGAGAGTGTGTACAATGCTGCCTTGGCCTTAGGAATTGCAAATCAGCTAACCAACATACTCAGAGATGTTGGAGAGGATGCCAGGCGAGGAAGAGTGTATCTACCACAAGATGAATTGGCTCTGGCAGGGCTTTCAGATGACGACATATTTGCCGGTAAGGTGACAGACAAGTGGAGGAACTTCATGAAGAGCCAAATTAAAAGGGCGAGAACGTTTTTTGATGAGGCAGAAAAGGGAGTGACGGAGCTCAATGAACAGAGCAGATGGCCGGTGTGGGCGTCTTTGCTATTATATCGACAGATATTGGACGAAATAGAAGCTAATGATTACAACAATTTCACTAAGAGGGCTTATGTGAGCAAAACCAAGAAGTTACTTTCTTTACCACTTGCATATGCTAGATCTATGGTTCCTCCATCAACAAAGTTATCTCATGTATGA

Protein sequence

>Msa0778060

MSVTLLRVASTPSLEVSCSNGILDSFGVVKLVDSSKFLSRDSVSIRAKKNDKKKTRRFCSLSTDIKYACVGQPGLESASNFPLLSNVLANPTAGEVAVSSEQKVYDVVLKQASLVKRKLSSTGELEVKPEIVLPGNLSLLSEAYDRCGEICAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNASHITATAMDRWESRLDELFQGRPFDMLDAALSDTVNRFPVDIQPFKDMIEGMRMDLKKSRYKSFDELYLYCYYVAGTVGLMSVPVMGISTHSQATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELALAGLSDDDIFAGKVTDKWRNFMKSQIKRARTFFDEAEKGVTELNEQSRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKTKKLLSLPLAYARSMVPPSTKLSHV*