Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265960 | XP_003597463.2 | 94.248 | 452 | 26 | 0 | 1 | 452 | 1 | 452 | 0.0 | 836 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265960 | G7IUE9 | 94.248 | 452 | 26 | 0 | 1 | 452 | 1 | 452 | 0.0 | 836 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0159590 | Msa0265960 | 0.803392 | 3.564147e-49 | -8.615850e-47 |
| Msa0265960 | Msa0302830 | 0.862516 | 4.794294e-64 | -8.615850e-47 |
| Msa0265960 | Msa0563740 | 0.816534 | 5.262067e-52 | -8.615850e-47 |
| Msa0265960 | Msa0590200 | 0.805776 | 1.133775e-49 | -8.615850e-47 |
| Msa0265960 | Msa0606100 | 0.807851 | 4.129928e-50 | -8.615850e-47 |
| Msa0265960 | Msa0668900 | 0.808129 | 3.603446e-50 | -8.615850e-47 |
| Msa0265960 | Msa0747740 | 0.811271 | 7.611054e-51 | -8.615850e-47 |
| Msa0265960 | Msa0828190 | 0.821353 | 4.224922e-53 | -8.615850e-47 |
| Msa0265960 | Msa0888790 | 0.813607 | 2.349131e-51 | -8.615850e-47 |
| Msa0265960 | Msa0924430 | 0.804568 | 2.029711e-49 | -8.615850e-47 |
| Msa0265960 | Msa0931590 | 0.812846 | 3.451139e-51 | -8.615850e-47 |
| Msa0265960 | Msa1078880 | 0.812000 | 5.282942e-51 | -8.615850e-47 |
| Msa0265960 | Msa1078970 | 0.803276 | 3.765624e-49 | -8.615850e-47 |
| Msa0265960 | Msa1127280 | 0.806674 | 7.333043e-50 | -8.615850e-47 |
| Msa0265960 | Msa1148630 | 0.807231 | 5.592879e-50 | -8.615850e-47 |
| Msa0265960 | Msa1162880 | 0.800193 | 1.616281e-48 | -8.615850e-47 |
| Msa0265960 | Msa1169190 | 0.807267 | 5.495544e-50 | -8.615850e-47 |
| Msa0265960 | Msa1214350 | 0.809915 | 1.494601e-50 | -8.615850e-47 |
| Msa0265960 | Msa1261050 | 0.800384 | 1.478255e-48 | -8.615850e-47 |
| Msa0265960 | Msa1300460 | 0.811506 | 6.767236e-51 | -8.615850e-47 |
| Msa0265960 | Msa1339170 | 0.811413 | 7.089961e-51 | -8.615850e-47 |
| Msa0265960 | Msa1453280 | 0.822071 | 2.882252e-53 | -8.615850e-47 |
| Msa0265960 | Msa1465360 | 0.802809 | 4.702926e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265960 | MtrunA17_Chr2g0329061 | 94.248 | 452 | 26 | 0 | 1 | 452 | 1 | 452 | 0.0 | 836 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265960 | AT5G12930.1 | 48.601 | 393 | 176 | 11 | 1 | 384 | 1 | 376 | 3.28e-109 | 330 |
Find 120 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTACAAAACCATATTTAA+TGG | 0.181372 | 2_2:-66379841 | None:intergenic |
| TTTCTTATTGTTGCTGTTAT+TGG | 0.223426 | 2_2:+66375782 | Msa0265960:CDS |
| TAGCCAGCTATTGCTGTCTT+TGG | 0.236408 | 2_2:+66379866 | Msa0265960:three_prime_UTR |
| AAAGAAGGATTTGGTTGTTC+TGG | 0.252617 | 2_2:+66378720 | Msa0265960:CDS |
| GTCAACATTCTACAGGTTTA+TGG | 0.253819 | 2_2:+66379746 | Msa0265960:three_prime_UTR |
| AATTGTAGATTCAGAATTCT+TGG | 0.260695 | 2_2:-66379277 | None:intergenic |
| TTCCTTCTGTAATGAATATA+TGG | 0.287784 | 2_2:+66377584 | Msa0265960:CDS |
| AATGTCTGGCTTGTCGGATT+TGG | 0.295447 | 2_2:+66377997 | Msa0265960:CDS |
| TAGAGAAGGGTGACTTATAT+TGG | 0.298699 | 2_2:-66377952 | None:intergenic |
| CTGAATTAGAAGACATTATA+CGG | 0.313995 | 2_2:+66378671 | Msa0265960:CDS |
| TTCAAAACTAAAGAAGGATT+TGG | 0.320274 | 2_2:+66378711 | Msa0265960:CDS |
| AGCCAGCTATTGCTGTCTTT+GGG | 0.321958 | 2_2:+66379867 | Msa0265960:three_prime_UTR |
| GCATCCAACTCTAAACAAAA+TGG | 0.348180 | 2_2:+66375434 | Msa0265960:five_prime_UTR |
| TTGCAATTAGATGAAACATT+TGG | 0.367954 | 2_2:+66377507 | Msa0265960:CDS |
| TTAAGAAATCCGTTGAGCTT+AGG | 0.369730 | 2_2:+66375849 | Msa0265960:CDS |
| AGATAACCTCATTTATGATA+TGG | 0.377526 | 2_2:+66379167 | Msa0265960:CDS |
| TGTGGCAGCTGAATTTCATT+TGG | 0.377686 | 2_2:-66379138 | None:intergenic |
| TAAGAAGGAATTTCTTTAAG+AGG | 0.384480 | 2_2:-66379381 | None:intergenic |
| TAAGAAATCCGTTGAGCTTA+GGG | 0.394216 | 2_2:+66375850 | Msa0265960:CDS |
| CAGACATTCTTCTCTCCTCT+TGG | 0.398506 | 2_2:-66377982 | None:intergenic |
| AAAATGAAGTCTCACTGGTT+TGG | 0.399324 | 2_2:-66379979 | None:intergenic |
| CAAATAGTGTAGCAAACAAT+AGG | 0.402326 | 2_2:+66379721 | Msa0265960:three_prime_UTR |
| AAGATGTTTATAATCTTAAG+AGG | 0.402964 | 2_2:+66378472 | Msa0265960:CDS |
| TGCTGCTGCTCAGTCCAAAA+AGG | 0.410742 | 2_2:+66375808 | Msa0265960:CDS |
| CCAAAATATGTAAGAACAAA+AGG | 0.411718 | 2_2:-66379655 | None:intergenic |
| CTCAGAAGAGTTTAGCAGAT+TGG | 0.411871 | 2_2:-66378532 | None:intergenic |
| AACAATTTCAAAACTAAAGA+AGG | 0.414561 | 2_2:+66378705 | Msa0265960:CDS |
| CACATCTGCTGCTGATATCC+AGG | 0.416831 | 2_2:+66378030 | Msa0265960:CDS |
| ACAATAAGAAACCGATGAAT+AGG | 0.418221 | 2_2:-66375770 | None:intergenic |
| CAAGAGGAGAGAAGAATGTC+TGG | 0.419161 | 2_2:+66377983 | Msa0265960:CDS |
| GTTCATTAGAGGTTATAAAT+CGG | 0.419698 | 2_2:-66380022 | None:intergenic |
| TGCAGGTTATGCAGCTTTCA+AGG | 0.419818 | 2_2:+66379085 | Msa0265960:intron |
| AATGAGCAGAGGTTCATTAG+AGG | 0.421638 | 2_2:-66380033 | None:intergenic |
| ACGCCGCGGCTCGACGGTTG+CGG | 0.422527 | 2_2:-66375612 | None:intergenic |
| TTCATTAGAGGTTATAAATC+GGG | 0.424201 | 2_2:-66380021 | None:intergenic |
| CGTTAACAACCCGTCCTTGA+AGG | 0.436333 | 2_2:-66375670 | None:intergenic |
| CTCTTGGTCTTCATTAGAGA+AGG | 0.441119 | 2_2:-66377966 | None:intergenic |
| GGTAATGGTGAAGTAGCGTT+AGG | 0.448670 | 2_2:-66375536 | None:intergenic |
| TTTGGTTGTTCTGGAACAAA+AGG | 0.449334 | 2_2:+66378729 | Msa0265960:CDS |
| CGACGGCCGGAGAGAGTGAT+TGG | 0.450699 | 2_2:-66375578 | None:intergenic |
| GACTAATTACTCATTAAGTA+TGG | 0.452612 | 2_2:+66379922 | Msa0265960:three_prime_UTR |
| GTTGCCGTTAGAGTTGTTCA+TGG | 0.453633 | 2_2:-66375513 | None:intergenic |
| TAATTGCAATTCTCCGTCCT+TGG | 0.457323 | 2_2:-66377493 | None:intergenic |
| GTTGGTAGAATGACATCAAC+AGG | 0.459761 | 2_2:-66379255 | None:intergenic |
| TGATGAACTTGCATTTGCTT+GGG | 0.460645 | 2_2:+66375736 | Msa0265960:CDS |
| GAGAAGAATGTCTGGCTTGT+CGG | 0.462441 | 2_2:+66377991 | Msa0265960:CDS |
| GCATTAGATTTCTGATAAGA+AGG | 0.463964 | 2_2:-66379396 | None:intergenic |
| AGATCTTGTGCATTGTTGAC+AGG | 0.464468 | 2_2:-66379231 | None:intergenic |
| TTATGCTCAGTTTAACAACT+TGG | 0.475767 | 2_2:+66378440 | Msa0265960:intron |
| ATTTGGAATACTTGCAGAGA+AGG | 0.479701 | 2_2:-66379121 | None:intergenic |
| AGTTTGTTGATTGCGGTTGT+TGG | 0.481813 | 2_2:+66377544 | Msa0265960:CDS |
| GTGATGAACTTGCATTTGCT+TGG | 0.487161 | 2_2:+66375735 | Msa0265960:CDS |
| ATGAGGTTATCTCTCATTTG+TGG | 0.489300 | 2_2:-66379156 | None:intergenic |
| TTGCAATTCTCCGTCCTTGG+TGG | 0.492663 | 2_2:-66377490 | None:intergenic |
| AAAACAATTGTCACCTCGTA+AGG | 0.497486 | 2_2:+66379437 | Msa0265960:CDS |
| CGATGAAAATGAAGTCTCAC+TGG | 0.502795 | 2_2:-66379984 | None:intergenic |
| AATGAGTAATTAGTCTATGA+AGG | 0.508399 | 2_2:-66379914 | None:intergenic |
| CTGGATTAACCTTCAAGGAC+GGG | 0.510704 | 2_2:+66375661 | Msa0265960:CDS |
| GGCGGAGAGACGACGACGGC+CGG | 0.511854 | 2_2:-66375591 | None:intergenic |
| ATGGCCTGGATTAACCTTCA+AGG | 0.513528 | 2_2:+66375656 | Msa0265960:CDS |
| ATAGGTAGTCAACATTCTAC+AGG | 0.514539 | 2_2:+66379739 | Msa0265960:three_prime_UTR |
| ATCCCAAAGACAGCAATAGC+TGG | 0.514581 | 2_2:-66379869 | None:intergenic |
| CCGCCGCAACCGTCGAGCCG+CGG | 0.517144 | 2_2:+66375609 | Msa0265960:CDS |
| TTGGAGGACCTCATTTCCAC+TGG | 0.518085 | 2_2:-66377933 | None:intergenic |
| AAATTATAGATAGTAGCAGC+AGG | 0.520555 | 2_2:+66379800 | Msa0265960:three_prime_UTR |
| TGAAGGTTAATCCAGGCCAT+TGG | 0.520684 | 2_2:-66375653 | None:intergenic |
| TGTCTCCTTGTAGGTTGCTG+TGG | 0.522837 | 2_2:+66379611 | Msa0265960:intron |
| AGTAGAAGACGATCTCTCAA+TGG | 0.533967 | 2_2:+66379471 | Msa0265960:CDS |
| ATTCCACCAATCACTCTCTC+CGG | 0.534001 | 2_2:+66375572 | Msa0265960:CDS |
| GAGAATGTGACAGAAAATGA+TGG | 0.535570 | 2_2:+66375393 | Msa0265960:five_prime_UTR |
| TACCATATATTCATTACAGA+AGG | 0.538276 | 2_2:-66377586 | None:intergenic |
| GTGCGAGTGCAAATAAGAGA+TGG | 0.543346 | 2_2:+66379502 | Msa0265960:CDS |
| GTAGATTCAGAATTCTTGGT+TGG | 0.551861 | 2_2:-66379273 | None:intergenic |
| CGAATTAAGTTTGTTGATTG+CGG | 0.555870 | 2_2:+66377537 | Msa0265960:CDS |
| AGAAGGGTGACTTATATTGG+AGG | 0.556146 | 2_2:-66377949 | None:intergenic |
| AAGAGCCTCCAGTGGAAATG+AGG | 0.559249 | 2_2:+66377925 | Msa0265960:CDS |
| TAAGAGGGACTGTGATGAGA+AGG | 0.561669 | 2_2:+66378488 | Msa0265960:CDS |
| CCGTCCTTGAAGGTTAATCC+AGG | 0.562538 | 2_2:-66375660 | None:intergenic |
| CCGCGGCTCGACGGTTGCGG+CGG | 0.563817 | 2_2:-66375609 | None:intergenic |
| GGAATACTTGCAGAGAAGGA+TGG | 0.566765 | 2_2:-66379117 | None:intergenic |
| GCTAGCGCGGCTAGAACTGT+TGG | 0.566998 | 2_2:+66375701 | Msa0265960:CDS |
| ACTATCAGAATCAGAAGATG+AGG | 0.570063 | 2_2:-66379205 | None:intergenic |
| AGCGCGGCTAGAACTGTTGG+TGG | 0.575091 | 2_2:+66375704 | Msa0265960:CDS |
| GATCGGACGCCGCGGCTCGA+CGG | 0.576960 | 2_2:-66375618 | None:intergenic |
| GTAATGGTGAAGTAGCGTTA+GGG | 0.578358 | 2_2:-66375535 | None:intergenic |
| TCTTGGTCTTCATTAGAGAA+GGG | 0.582381 | 2_2:-66377965 | None:intergenic |
| GCGGCTAGAACTGTTGGTGG+TGG | 0.584041 | 2_2:+66375707 | Msa0265960:CDS |
| CGGCCGGAGAGAGTGATTGG+TGG | 0.585218 | 2_2:-66375575 | None:intergenic |
| ATCAGAAGATGAGGGGCTAG+TGG | 0.588405 | 2_2:-66379196 | None:intergenic |
| CCTGGATTAACCTTCAAGGA+CGG | 0.589852 | 2_2:+66375660 | Msa0265960:CDS |
| TGCTGTCCATATCATAAATG+AGG | 0.592185 | 2_2:-66379173 | None:intergenic |
| TGCGAGTGCAAATAAGAGAT+GGG | 0.593088 | 2_2:+66379503 | Msa0265960:CDS |
| CTATCAGAATCAGAAGATGA+GGG | 0.593200 | 2_2:-66379204 | None:intergenic |
| TCAGCTGTTATCAAGCATGC+AGG | 0.594282 | 2_2:+66377395 | Msa0265960:CDS |
| AATTTCTTTAAGAGGACTAG+CGG | 0.594712 | 2_2:-66379373 | None:intergenic |
| TTCTGAGGTTGCTAATAGCA+AGG | 0.595094 | 2_2:+66378548 | Msa0265960:CDS |
| TGATAGTATAGTAAATTGAG+AGG | 0.605111 | 2_2:+66375371 | Msa0265960:five_prime_UTR |
| AAGAAGTTATCCACCAAGGA+CGG | 0.607937 | 2_2:+66377480 | Msa0265960:CDS |
| AGATGTTTATAATCTTAAGA+GGG | 0.615181 | 2_2:+66378473 | Msa0265960:CDS |
| ACTGGAGGCTCTTCTACTCA+AGG | 0.617031 | 2_2:-66377915 | None:intergenic |
| ATTGGCTTCGAAAATGAGAT+CGG | 0.626620 | 2_2:-66375635 | None:intergenic |
| GAGGACCTCATTTCCACTGG+AGG | 0.630298 | 2_2:-66377930 | None:intergenic |
| TGTGGAATGTAGCAGAGTAC+AGG | 0.632552 | 2_2:+66379629 | Msa0265960:three_prime_UTR |
| CTTCTCTAATGAAGACCAAG+AGG | 0.641341 | 2_2:+66377967 | Msa0265960:CDS |
| GCTTCCATGAACAACTCTAA+CGG | 0.643301 | 2_2:+66375509 | Msa0265960:exon |
| CAATCTGCTAAACTCTTCTG+AGG | 0.648603 | 2_2:+66378533 | Msa0265960:CDS |
| ATAAGAAACCGATGAATAGG+CGG | 0.650348 | 2_2:-66375767 | None:intergenic |
| TATACATACCCTAAGCTCAA+CGG | 0.651300 | 2_2:-66375858 | None:intergenic |
| GGTGGAATTGAAACGAGACA+TGG | 0.665905 | 2_2:-66375557 | None:intergenic |
| TTGAGTAGAAGAGCCTCCAG+TGG | 0.670401 | 2_2:+66377917 | Msa0265960:CDS |
| ATTGAAACGAGACATGGTAA+TGG | 0.670705 | 2_2:-66375551 | None:intergenic |
| AATTATAGATAGTAGCAGCA+GGG | 0.674088 | 2_2:+66379801 | Msa0265960:three_prime_UTR |
| TATCAGAATCAGAAGATGAG+GGG | 0.677495 | 2_2:-66379203 | None:intergenic |
| CTATAATGAGAAATGAGCAG+AGG | 0.685334 | 2_2:-66380044 | None:intergenic |
| TAACGCTGATGAAGCTAGCG+CGG | 0.686137 | 2_2:+66375688 | Msa0265960:CDS |
| TAGCGGATTGAAATTTCGAG+CGG | 0.689209 | 2_2:-66379356 | None:intergenic |
| GAAAATGAGATCGGACGCCG+CGG | 0.709704 | 2_2:-66375626 | None:intergenic |
| TATCAAGAAGTTATCCACCA+AGG | 0.731353 | 2_2:+66377476 | Msa0265960:CDS |
| AATTAGAAGACATTATACGG+AGG | 0.745017 | 2_2:+66378674 | Msa0265960:CDS |
| TTGCGGCGGAGAGACGACGA+CGG | 0.751092 | 2_2:-66375595 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTATTTGAAAAGCATTT+TGG | + | chr2_2:66375958-66375977 | Msa0265960:intron | 15.0% |
| !!! | TTTTTAAATTAAGATTGTAG+AGG | - | chr2_2:66376354-66376373 | None:intergenic | 15.0% |
| !! | TACTAAATATTGTCAAATAA+TGG | + | chr2_2:66377766-66377785 | Msa0265960:intron | 15.0% |
| !! | TTATAAATACATCATATATC+AGG | + | chr2_2:66378110-66378129 | Msa0265960:intron | 15.0% |
| !! | TAAGAATTTAAAAGTCAAAT+CGG | - | chr2_2:66378918-66378937 | None:intergenic | 15.0% |
| !! | ATTTACAAAACCATATTTAA+TGG | - | chr2_2:66379844-66379863 | None:intergenic | 15.0% |
| !!! | ATTTGTTATAATATTGTTGC+TGG | + | chr2_2:66375908-66375927 | Msa0265960:intron | 20.0% |
| !!! | TTTGTTATAATATTGTTGCT+GGG | + | chr2_2:66375909-66375928 | Msa0265960:intron | 20.0% |
| !!! | TTCAAATTTTCATCAGAAAT+TGG | - | chr2_2:66375936-66375955 | None:intergenic | 20.0% |
| !! | TTGTTATGTTAATAGTCATT+TGG | + | chr2_2:66376129-66376148 | Msa0265960:intron | 20.0% |
| !! | TGTTATGTTAATAGTCATTT+GGG | + | chr2_2:66376130-66376149 | Msa0265960:intron | 20.0% |
| !!! | TGCTTTTGATTTTTTTATCA+TGG | + | chr2_2:66377287-66377306 | Msa0265960:intron | 20.0% |
| !! | TTGAATGTGTGTATTAATAT+TGG | + | chr2_2:66377347-66377366 | Msa0265960:intron | 20.0% |
| !!! | TTATTATATAGCTTTTCACT+TGG | + | chr2_2:66377637-66377656 | Msa0265960:intron | 20.0% |
| !! | AAAAACTTAGTGTTATATAG+CGG | + | chr2_2:66377703-66377722 | Msa0265960:intron | 20.0% |
| !! | AATTAGTAATTGCTTAATTG+TGG | + | chr2_2:66378265-66378284 | Msa0265960:intron | 20.0% |
| !! | ATAGAACTAATAAAAACACA+AGG | - | chr2_2:66378381-66378400 | None:intergenic | 20.0% |
| !! | AAGATGTTTATAATCTTAAG+AGG | + | chr2_2:66378472-66378491 | Msa0265960:CDS | 20.0% |
| !! | AGATGTTTATAATCTTAAGA+GGG | + | chr2_2:66378473-66378492 | Msa0265960:CDS | 20.0% |
| !! | AACAATTTCAAAACTAAAGA+AGG | + | chr2_2:66378705-66378724 | Msa0265960:CDS | 20.0% |
| !! | AAGAATTTAAAAGTCAAATC+GGG | - | chr2_2:66378917-66378936 | None:intergenic | 20.0% |
| !! | TGAAATGCTTCTTATATTAA+TGG | + | chr2_2:66379046-66379065 | Msa0265960:intron | 20.0% |
| !!! | TAAGTTTTAGCCATTAAATA+TGG | + | chr2_2:66379831-66379850 | Msa0265960:three_prime_UTR | 20.0% |
| ! | TGATAGTATAGTAAATTGAG+AGG | + | chr2_2:66375371-66375390 | Msa0265960:five_prime_UTR | 25.0% |
| !!! | TTTGAATTTTGAGTTTGAGA+GGG | - | chr2_2:66375485-66375504 | None:intergenic | 25.0% |
| !! | TTTCTTATTGTTGCTGTTAT+TGG | + | chr2_2:66375782-66375801 | Msa0265960:CDS | 25.0% |
| ! | TTGTTATAATATTGTTGCTG+GGG | + | chr2_2:66375910-66375929 | Msa0265960:intron | 25.0% |
| ! | GTTATGTTAATAGTCATTTG+GGG | + | chr2_2:66376131-66376150 | Msa0265960:intron | 25.0% |
| !! | TTTCACTAAAAAAGACCTTT+TGG | + | chr2_2:66376213-66376232 | Msa0265960:intron | 25.0% |
| ! | TTTCTTTATATCCGATTTAG+AGG | + | chr2_2:66376902-66376921 | Msa0265960:intron | 25.0% |
| !!! | GAATTCGAGATCTTTTAAAA+TGG | + | chr2_2:66376943-66376962 | Msa0265960:intron | 25.0% |
| ! | ATCTTCAATATGAGAAAACT+TGG | + | chr2_2:66377153-66377172 | Msa0265960:intron | 25.0% |
| ! | TTAATACACACATTCAAAGT+TGG | - | chr2_2:66377344-66377363 | None:intergenic | 25.0% |
| ! | TTGCAATTAGATGAAACATT+TGG | + | chr2_2:66377507-66377526 | Msa0265960:CDS | 25.0% |
| ! | TTCCTTCTGTAATGAATATA+TGG | + | chr2_2:66377584-66377603 | Msa0265960:CDS | 25.0% |
| ! | TACCATATATTCATTACAGA+AGG | - | chr2_2:66377589-66377608 | None:intergenic | 25.0% |
| ! | AACTCATATACTTACTGTAT+TGG | + | chr2_2:66377612-66377631 | Msa0265960:intron | 25.0% |
| ! | ACTCATATACTTACTGTATT+GGG | + | chr2_2:66377613-66377632 | Msa0265960:intron | 25.0% |
| ! | TTAGTACTAAATACGTATCA+TGG | - | chr2_2:66377752-66377771 | None:intergenic | 25.0% |
| ! | ATATTGTCAAATAATGGTAG+TGG | + | chr2_2:66377772-66377791 | Msa0265960:intron | 25.0% |
| ! | ATTGACATAGTTAAATGCAA+TGG | + | chr2_2:66378295-66378314 | Msa0265960:intron | 25.0% |
| !!! | TAATTTGTTTTACTCTCTTG+CGG | + | chr2_2:66378337-66378356 | Msa0265960:intron | 25.0% |
| ! | TTGTAGTGAAAATGATAAGT+GGG | - | chr2_2:66378634-66378653 | None:intergenic | 25.0% |
| ! | ATTGTAGTGAAAATGATAAG+TGG | - | chr2_2:66378635-66378654 | None:intergenic | 25.0% |
| ! | CTGAATTAGAAGACATTATA+CGG | + | chr2_2:66378671-66378690 | Msa0265960:CDS | 25.0% |
| ! | TTCAAAACTAAAGAAGGATT+TGG | + | chr2_2:66378711-66378730 | Msa0265960:CDS | 25.0% |
| !! | ACAAAAGGTACATATATACA+TGG | + | chr2_2:66378744-66378763 | Msa0265960:intron | 25.0% |
| ! | TACATGGTAGATATAAACAA+TGG | + | chr2_2:66378760-66378779 | Msa0265960:intron | 25.0% |
| ! | AGATAACCTCATTTATGATA+TGG | + | chr2_2:66379167-66379186 | Msa0265960:CDS | 25.0% |
| ! | AATTGTAGATTCAGAATTCT+TGG | - | chr2_2:66379280-66379299 | None:intergenic | 25.0% |
| ! | CAAAAATCTTAAATTCGTCA+GGG | + | chr2_2:66379319-66379338 | Msa0265960:CDS | 25.0% |
| ! | TAAGAAGGAATTTCTTTAAG+AGG | - | chr2_2:66379384-66379403 | None:intergenic | 25.0% |
| ! | CCAAAATATGTAAGAACAAA+AGG | - | chr2_2:66379658-66379677 | None:intergenic | 25.0% |
| !! | CCTTTTGTTCTTACATATTT+TGG | + | chr2_2:66379655-66379674 | Msa0265960:three_prime_UTR | 25.0% |
| !! | AATGAGTAATTAGTCTATGA+AGG | - | chr2_2:66379917-66379936 | None:intergenic | 25.0% |
| ! | GACTAATTACTCATTAAGTA+TGG | + | chr2_2:66379922-66379941 | Msa0265960:three_prime_UTR | 25.0% |
| ! | TTCATTAGAGGTTATAAATC+GGG | - | chr2_2:66380024-66380043 | None:intergenic | 25.0% |
| ! | GTTCATTAGAGGTTATAAAT+CGG | - | chr2_2:66380025-66380044 | None:intergenic | 25.0% |
| !!! | TATGCCATTTTGTTTAGAGT+TGG | - | chr2_2:66375441-66375460 | None:intergenic | 30.0% |
| !!! | GTTTGAATTTTGAGTTTGAG+AGG | - | chr2_2:66375486-66375505 | None:intergenic | 30.0% |
| ACAATAAGAAACCGATGAAT+AGG | - | chr2_2:66375773-66375792 | None:intergenic | 30.0% | |
| GCAAAATGTTCGTAAATTAG+TGG | + | chr2_2:66376087-66376106 | Msa0265960:intron | 30.0% | |
| !! | TAGTGGTTATGTTAGTTTGT+AGG | + | chr2_2:66376104-66376123 | Msa0265960:intron | 30.0% |
| !! | AGTGGTTATGTTAGTTTGTA+GGG | + | chr2_2:66376105-66376124 | Msa0265960:intron | 30.0% |
| TGTAGTGTTTGGCAAAATTA+GGG | - | chr2_2:66376425-66376444 | None:intergenic | 30.0% | |
| TTGTAGTGTTTGGCAAAATT+AGG | - | chr2_2:66376426-66376445 | None:intergenic | 30.0% | |
| CTGATTGAATTTGTAGTGTT+TGG | - | chr2_2:66376436-66376455 | None:intergenic | 30.0% | |
| TCAAATAGTAGCTTGAGTTA+AGG | - | chr2_2:66376613-66376632 | None:intergenic | 30.0% | |
| ACTATGACAACAACATTTCT+TGG | - | chr2_2:66376661-66376680 | None:intergenic | 30.0% | |
| ACTTATAGCATCCTCTAAAT+CGG | - | chr2_2:66376916-66376935 | None:intergenic | 30.0% | |
| TTCTGCACAGTTATAAATTG+CGG | - | chr2_2:66377099-66377118 | None:intergenic | 30.0% | |
| ! | TTGTTTCATCACTATTTTCC+AGG | + | chr2_2:66377371-66377390 | Msa0265960:intron | 30.0% |
| !! | CGAATTAAGTTTGTTGATTG+CGG | + | chr2_2:66377537-66377556 | Msa0265960:CDS | 30.0% |
| CTCATATACTTACTGTATTG+GGG | + | chr2_2:66377614-66377633 | Msa0265960:intron | 30.0% | |
| !! | AGTTTTTCAATAGACACGTT+AGG | - | chr2_2:66377690-66377709 | None:intergenic | 30.0% |
| ACACTGAAGAAAATAATACC+TGG | - | chr2_2:66378051-66378070 | None:intergenic | 30.0% | |
| AATAAAAACACAAGGAAACC+AGG | - | chr2_2:66378373-66378392 | None:intergenic | 30.0% | |
| TTATGCTCAGTTTAACAACT+TGG | + | chr2_2:66378440-66378459 | Msa0265960:intron | 30.0% | |
| AATTAGAAGACATTATACGG+AGG | + | chr2_2:66378674-66378693 | Msa0265960:CDS | 30.0% | |
| AATGCACCAATAGGTAATTT+AGG | + | chr2_2:66378783-66378802 | Msa0265960:intron | 30.0% | |
| TATGCACCTAAATTACCTAT+TGG | - | chr2_2:66378792-66378811 | None:intergenic | 30.0% | |
| !! | ATTGACTCACTTGTTATTGT+TGG | + | chr2_2:66378817-66378836 | Msa0265960:intron | 30.0% |
| !! | GACGAATTTAAGATTTTTGC+TGG | - | chr2_2:66379318-66379337 | None:intergenic | 30.0% |
| GCAAAAATCTTAAATTCGTC+AGG | + | chr2_2:66379318-66379337 | Msa0265960:CDS | 30.0% | |
| ! | AATTTCTTTAAGAGGACTAG+CGG | - | chr2_2:66379376-66379395 | None:intergenic | 30.0% |
| GCATTAGATTTCTGATAAGA+AGG | - | chr2_2:66379399-66379418 | None:intergenic | 30.0% | |
| CAAATAGTGTAGCAAACAAT+AGG | + | chr2_2:66379721-66379740 | Msa0265960:three_prime_UTR | 30.0% | |
| AAATTATAGATAGTAGCAGC+AGG | + | chr2_2:66379800-66379819 | Msa0265960:three_prime_UTR | 30.0% | |
| AATTATAGATAGTAGCAGCA+GGG | + | chr2_2:66379801-66379820 | Msa0265960:three_prime_UTR | 30.0% | |
| GAGAATGTGACAGAAAATGA+TGG | + | chr2_2:66375393-66375412 | Msa0265960:five_prime_UTR | 35.0% | |
| GCATCCAACTCTAAACAAAA+TGG | + | chr2_2:66375434-66375453 | Msa0265960:five_prime_UTR | 35.0% | |
| ATTGAAACGAGACATGGTAA+TGG | - | chr2_2:66375554-66375573 | None:intergenic | 35.0% | |
| ! | ATTGGCTTCGAAAATGAGAT+CGG | - | chr2_2:66375638-66375657 | None:intergenic | 35.0% |
| TGATGAACTTGCATTTGCTT+GGG | + | chr2_2:66375736-66375755 | Msa0265960:CDS | 35.0% | |
| ! | ATCTTTTTCCGCCTATTCAT+CGG | + | chr2_2:66375759-66375778 | Msa0265960:CDS | 35.0% |
| ATAAGAAACCGATGAATAGG+CGG | - | chr2_2:66375770-66375789 | None:intergenic | 35.0% | |
| ! | GAAAATCTCTCGATCCTTTT+TGG | - | chr2_2:66375825-66375844 | None:intergenic | 35.0% |
| TTAAGAAATCCGTTGAGCTT+AGG | + | chr2_2:66375849-66375868 | Msa0265960:CDS | 35.0% | |
| TAAGAAATCCGTTGAGCTTA+GGG | + | chr2_2:66375850-66375869 | Msa0265960:CDS | 35.0% | |
| TATACATACCCTAAGCTCAA+CGG | - | chr2_2:66375861-66375880 | None:intergenic | 35.0% | |
| GTAGTGTTTGGCAAAATTAG+GGG | - | chr2_2:66376424-66376443 | None:intergenic | 35.0% | |
| ! | AGCTAGCTTATAACTGATAG+CGG | - | chr2_2:66376468-66376487 | None:intergenic | 35.0% |
| !! | TTATAGCGGATAGCTGATAA+TGG | - | chr2_2:66376487-66376506 | None:intergenic | 35.0% |
| !!! | TTTTTTACCAAACAGAGCCT+TGG | + | chr2_2:66376583-66376602 | Msa0265960:intron | 35.0% |
| TTACAATCACCACGCAATTA+CGG | - | chr2_2:66376765-66376784 | None:intergenic | 35.0% | |
| ! | CAATGTGTATTGTTGGTGTT+GGG | - | chr2_2:66377043-66377062 | None:intergenic | 35.0% |
| ACAATGTGTATTGTTGGTGT+TGG | - | chr2_2:66377044-66377063 | None:intergenic | 35.0% | |
| CACAGTTATAAATTGCGGAT+GGG | - | chr2_2:66377094-66377113 | None:intergenic | 35.0% | |
| TATCAAGAAGTTATCCACCA+AGG | + | chr2_2:66377476-66377495 | Msa0265960:CDS | 35.0% | |
| !! | ACTCATTGACTTTGTTAGCA+GGG | + | chr2_2:66377890-66377909 | Msa0265960:intron | 35.0% |
| TAGAGAAGGGTGACTTATAT+TGG | - | chr2_2:66377955-66377974 | None:intergenic | 35.0% | |
| ! | TCTTGGTCTTCATTAGAGAA+GGG | - | chr2_2:66377968-66377987 | None:intergenic | 35.0% |
| GTGTCATCGTTGAATGATAT+TGG | + | chr2_2:66378067-66378086 | Msa0265960:intron | 35.0% | |
| GGTTATCTGTCAAATGATAC+AGG | + | chr2_2:66378131-66378150 | Msa0265960:intron | 35.0% | |
| ! | TCCATGGTCTTGACTTTAAT+TGG | + | chr2_2:66378229-66378248 | Msa0265960:intron | 35.0% |
| TCCAATTAAAGTCAAGACCA+TGG | - | chr2_2:66378233-66378252 | None:intergenic | 35.0% | |
| ! | ATTGGTCAGCTCTTTTATTG+TGG | - | chr2_2:66378517-66378536 | None:intergenic | 35.0% |
| ! | TGCATTTTATTCTCCAGAGT+TGG | + | chr2_2:66378578-66378597 | Msa0265960:intron | 35.0% |
| !! | ATGATAAGTGGGTTAGGAAA+GGG | - | chr2_2:66378623-66378642 | None:intergenic | 35.0% |
| !! | AATGATAAGTGGGTTAGGAA+AGG | - | chr2_2:66378624-66378643 | None:intergenic | 35.0% |
| ! | GTGAAAATGATAAGTGGGTT+AGG | - | chr2_2:66378629-66378648 | None:intergenic | 35.0% |
| ! | AAAGAAGGATTTGGTTGTTC+TGG | + | chr2_2:66378720-66378739 | Msa0265960:CDS | 35.0% |
| !! | TTTGGTTGTTCTGGAACAAA+AGG | + | chr2_2:66378729-66378748 | Msa0265960:CDS | 35.0% |
| AAACAATGGAATGCACCAAT+AGG | + | chr2_2:66378774-66378793 | Msa0265960:intron | 35.0% | |
| !! | ACCTGCAGTCAATTTTGAAA+GGG | - | chr2_2:66379072-66379091 | None:intergenic | 35.0% |
| ! | AACCTGCAGTCAATTTTGAA+AGG | - | chr2_2:66379073-66379092 | None:intergenic | 35.0% |
| ! | ATTTGGAATACTTGCAGAGA+AGG | - | chr2_2:66379124-66379143 | None:intergenic | 35.0% |
| ATGAGGTTATCTCTCATTTG+TGG | - | chr2_2:66379159-66379178 | None:intergenic | 35.0% | |
| TGCTGTCCATATCATAAATG+AGG | - | chr2_2:66379176-66379195 | None:intergenic | 35.0% | |
| TATCAGAATCAGAAGATGAG+GGG | - | chr2_2:66379206-66379225 | None:intergenic | 35.0% | |
| CTATCAGAATCAGAAGATGA+GGG | - | chr2_2:66379207-66379226 | None:intergenic | 35.0% | |
| ACTATCAGAATCAGAAGATG+AGG | - | chr2_2:66379208-66379227 | None:intergenic | 35.0% | |
| GTAGATTCAGAATTCTTGGT+TGG | - | chr2_2:66379276-66379295 | None:intergenic | 35.0% | |
| ! | TACGAGGTGACAATTGTTTT+TGG | - | chr2_2:66379437-66379456 | None:intergenic | 35.0% |
| AAAACAATTGTCACCTCGTA+AGG | + | chr2_2:66379437-66379456 | Msa0265960:CDS | 35.0% | |
| !!! | CTCTTTTTTAAGTCCTTACG+AGG | - | chr2_2:66379453-66379472 | None:intergenic | 35.0% |
| AGTAAGTCAGCTCAAAATTC+TGG | + | chr2_2:66379536-66379555 | Msa0265960:intron | 35.0% | |
| CACGAATAAGCATATGTACA+TGG | - | chr2_2:66379587-66379606 | None:intergenic | 35.0% | |
| ATAGGTAGTCAACATTCTAC+AGG | + | chr2_2:66379739-66379758 | Msa0265960:three_prime_UTR | 35.0% | |
| GTCAACATTCTACAGGTTTA+TGG | + | chr2_2:66379746-66379765 | Msa0265960:three_prime_UTR | 35.0% | |
| ! | AAAATGAAGTCTCACTGGTT+TGG | - | chr2_2:66379982-66380001 | None:intergenic | 35.0% |
| GCTTCCATGAACAACTCTAA+CGG | + | chr2_2:66375509-66375528 | Msa0265960:exon | 40.0% | |
| GTAATGGTGAAGTAGCGTTA+GGG | - | chr2_2:66375538-66375557 | None:intergenic | 40.0% | |
| ! | GATCTCATTTTCGAAGCCAA+TGG | + | chr2_2:66375637-66375656 | Msa0265960:CDS | 40.0% |
| GTGATGAACTTGCATTTGCT+TGG | + | chr2_2:66375735-66375754 | Msa0265960:CDS | 40.0% | |
| ! | ATAGTCATTTGGGGTCTGTT+TGG | + | chr2_2:66376140-66376159 | Msa0265960:intron | 40.0% |
| AGAAAGTGACGGTTACCAAA+AGG | - | chr2_2:66376231-66376250 | None:intergenic | 40.0% | |
| ATAAGCTCGTGAGAAAGTGA+CGG | - | chr2_2:66376242-66376261 | None:intergenic | 40.0% | |
| ! | GCTGATAAGCTAGCTTATAG+CGG | - | chr2_2:66376501-66376520 | None:intergenic | 40.0% |
| ! | GCTGATAAGCTAGCTTATAG+CGG | - | chr2_2:66376501-66376520 | None:intergenic | 40.0% |
| ATAGTAACCAATAGTCCGAG+TGG | + | chr2_2:66376676-66376695 | Msa0265960:intron | 40.0% | |
| ATTACGGAATGATGCAGTTG+CGG | - | chr2_2:66376749-66376768 | None:intergenic | 40.0% | |
| GCTGTGACAATGTGTATTGT+TGG | - | chr2_2:66377050-66377069 | None:intergenic | 40.0% | |
| ATAAATTGCGGATGGGATCA+CGG | - | chr2_2:66377087-66377106 | None:intergenic | 40.0% | |
| GCACAGTTATAAATTGCGGA+TGG | - | chr2_2:66377095-66377114 | None:intergenic | 40.0% | |
| TGGTTGAGCAAGTTTCTCAA+TGG | + | chr2_2:66377173-66377192 | Msa0265960:intron | 40.0% | |
| GGTTGAGCAAGTTTCTCAAT+GGG | + | chr2_2:66377174-66377193 | Msa0265960:intron | 40.0% | |
| AAGAAGTTATCCACCAAGGA+CGG | + | chr2_2:66377480-66377499 | Msa0265960:CDS | 40.0% | |
| TAATTGCAATTCTCCGTCCT+TGG | - | chr2_2:66377496-66377515 | None:intergenic | 40.0% | |
| !! | AGTTTGTTGATTGCGGTTGT+TGG | + | chr2_2:66377544-66377563 | Msa0265960:CDS | 40.0% |
| !!! | TATAGCTTTTCACTTGGTGC+TGG | + | chr2_2:66377643-66377662 | Msa0265960:intron | 40.0% |
| !!! | ATAGCTTTTCACTTGGTGCT+GGG | + | chr2_2:66377644-66377663 | Msa0265960:intron | 40.0% |
| !! | CACTCATTGACTTTGTTAGC+AGG | + | chr2_2:66377889-66377908 | Msa0265960:intron | 40.0% |
| AGAAGGGTGACTTATATTGG+AGG | - | chr2_2:66377952-66377971 | None:intergenic | 40.0% | |
| ! | CTCTTGGTCTTCATTAGAGA+AGG | - | chr2_2:66377969-66377988 | None:intergenic | 40.0% |
| CTTCTCTAATGAAGACCAAG+AGG | + | chr2_2:66377967-66377986 | Msa0265960:CDS | 40.0% | |
| CTCAGAAGAGTTTAGCAGAT+TGG | - | chr2_2:66378535-66378554 | None:intergenic | 40.0% | |
| CAATCTGCTAAACTCTTCTG+AGG | + | chr2_2:66378533-66378552 | Msa0265960:CDS | 40.0% | |
| !! | TTCTGAGGTTGCTAATAGCA+AGG | + | chr2_2:66378548-66378567 | Msa0265960:CDS | 40.0% |
| GAAGTTGCAATTTCCAACTC+TGG | - | chr2_2:66378594-66378613 | None:intergenic | 40.0% | |
| !! | TGATAAGTGGGTTAGGAAAG+GGG | - | chr2_2:66378622-66378641 | None:intergenic | 40.0% |
| TGTGGCAGCTGAATTTCATT+TGG | - | chr2_2:66379141-66379160 | None:intergenic | 40.0% | |
| AGATCTTGTGCATTGTTGAC+AGG | - | chr2_2:66379234-66379253 | None:intergenic | 40.0% | |
| ! | GTTGGTAGAATGACATCAAC+AGG | - | chr2_2:66379258-66379277 | None:intergenic | 40.0% |
| !! | TAGCGGATTGAAATTTCGAG+CGG | - | chr2_2:66379359-66379378 | None:intergenic | 40.0% |
| AGTAGAAGACGATCTCTCAA+TGG | + | chr2_2:66379471-66379490 | Msa0265960:CDS | 40.0% | |
| TGCGAGTGCAAATAAGAGAT+GGG | + | chr2_2:66379503-66379522 | Msa0265960:CDS | 40.0% | |
| CGATGAAAATGAAGTCTCAC+TGG | - | chr2_2:66379987-66380006 | None:intergenic | 40.0% | |
| AATGAGCAGAGGTTCATTAG+AGG | - | chr2_2:66380036-66380055 | None:intergenic | 40.0% | |
| GTTGCCGTTAGAGTTGTTCA+TGG | - | chr2_2:66375516-66375535 | None:intergenic | 45.0% | |
| ! | GGTAATGGTGAAGTAGCGTT+AGG | - | chr2_2:66375539-66375558 | None:intergenic | 45.0% |
| GGTGGAATTGAAACGAGACA+TGG | - | chr2_2:66375560-66375579 | None:intergenic | 45.0% | |
| ATTCCACCAATCACTCTCTC+CGG | + | chr2_2:66375572-66375591 | Msa0265960:CDS | 45.0% | |
| TGAAGGTTAATCCAGGCCAT+TGG | - | chr2_2:66375656-66375675 | None:intergenic | 45.0% | |
| ATGGCCTGGATTAACCTTCA+AGG | + | chr2_2:66375656-66375675 | Msa0265960:CDS | 45.0% | |
| CCTGGATTAACCTTCAAGGA+CGG | + | chr2_2:66375660-66375679 | Msa0265960:CDS | 45.0% | |
| CTGGATTAACCTTCAAGGAC+GGG | + | chr2_2:66375661-66375680 | Msa0265960:CDS | 45.0% | |
| GCTTGAGTTAAGGAACACCA+AGG | - | chr2_2:66376603-66376622 | None:intergenic | 45.0% | |
| AACCAATAGTCCGAGTGGTA+AGG | + | chr2_2:66376681-66376700 | Msa0265960:intron | 45.0% | |
| TTCCTTACCACTCGGACTAT+TGG | - | chr2_2:66376686-66376705 | None:intergenic | 45.0% | |
| ! | GGTTTGAGTTCCTTACCACT+CGG | - | chr2_2:66376694-66376713 | None:intergenic | 45.0% |
| TGCATCATTCCGTAATTGCG+TGG | + | chr2_2:66376753-66376772 | Msa0265960:intron | 45.0% | |
| !! | TGAGGTGTTGCACGGATATT+AGG | - | chr2_2:66376792-66376811 | None:intergenic | 45.0% |
| !! | CACTACATTGAGGTGTTGCA+CGG | - | chr2_2:66376800-66376819 | None:intergenic | 45.0% |
| GTGCAACACCTCAATGTAGT+GGG | + | chr2_2:66376799-66376818 | Msa0265960:intron | 45.0% | |
| ACACATTGTCACAGCCACAA+TGG | + | chr2_2:66377055-66377074 | Msa0265960:intron | 45.0% | |
| CCACATCAACCACTTGCTTA+CGG | - | chr2_2:66377124-66377143 | None:intergenic | 45.0% | |
| ! | CGTAAGCAAGTGGTTGATGT+GGG | + | chr2_2:66377122-66377141 | Msa0265960:intron | 45.0% |
| ! | TGCTTGATAACAGCTGATCC+TGG | - | chr2_2:66377392-66377411 | None:intergenic | 45.0% |
| TCAGCTGTTATCAAGCATGC+AGG | + | chr2_2:66377395-66377414 | Msa0265960:CDS | 45.0% | |
| TGTTCCAGTGTCGTCATTTG+CGG | - | chr2_2:66377851-66377870 | None:intergenic | 45.0% | |
| CAGACATTCTTCTCTCCTCT+TGG | - | chr2_2:66377985-66378004 | None:intergenic | 45.0% | |
| CAAGAGGAGAGAAGAATGTC+TGG | + | chr2_2:66377983-66378002 | Msa0265960:CDS | 45.0% | |
| ! | GAGAAGAATGTCTGGCTTGT+CGG | + | chr2_2:66377991-66378010 | Msa0265960:CDS | 45.0% |
| ! | AATGTCTGGCTTGTCGGATT+TGG | + | chr2_2:66377997-66378016 | Msa0265960:CDS | 45.0% |
| TGTAGCCTGTTTGCATTCCA+TGG | + | chr2_2:66378213-66378232 | Msa0265960:intron | 45.0% | |
| CAAGACCATGGAATGCAAAC+AGG | - | chr2_2:66378221-66378240 | None:intergenic | 45.0% | |
| TAAGAGGGACTGTGATGAGA+AGG | + | chr2_2:66378488-66378507 | Msa0265960:CDS | 45.0% | |
| GCCCTTTCAAAATTGACTGC+AGG | + | chr2_2:66379068-66379087 | Msa0265960:intron | 45.0% | |
| TGCAGGTTATGCAGCTTTCA+AGG | + | chr2_2:66379085-66379104 | Msa0265960:intron | 45.0% | |
| GGAATACTTGCAGAGAAGGA+TGG | - | chr2_2:66379120-66379139 | None:intergenic | 45.0% | |
| GTGCGAGTGCAAATAAGAGA+TGG | + | chr2_2:66379502-66379521 | Msa0265960:CDS | 45.0% | |
| TCGTGTTCATGTCTCCTTGT+AGG | + | chr2_2:66379602-66379621 | Msa0265960:intron | 45.0% | |
| ACATTCCACAGCAACCTACA+AGG | - | chr2_2:66379619-66379638 | None:intergenic | 45.0% | |
| TGTGGAATGTAGCAGAGTAC+AGG | + | chr2_2:66379629-66379648 | Msa0265960:three_prime_UTR | 45.0% | |
| TAGCCAGCTATTGCTGTCTT+TGG | + | chr2_2:66379866-66379885 | Msa0265960:three_prime_UTR | 45.0% | |
| AGCCAGCTATTGCTGTCTTT+GGG | + | chr2_2:66379867-66379886 | Msa0265960:three_prime_UTR | 45.0% | |
| ATCCCAAAGACAGCAATAGC+TGG | - | chr2_2:66379872-66379891 | None:intergenic | 45.0% | |
| ! | CATTTTCGAAGCCAATGGCC+TGG | + | chr2_2:66375642-66375661 | Msa0265960:CDS | 50.0% |
| CCGTCCTTGAAGGTTAATCC+AGG | - | chr2_2:66375663-66375682 | None:intergenic | 50.0% | |
| CGTTAACAACCCGTCCTTGA+AGG | - | chr2_2:66375673-66375692 | None:intergenic | 50.0% | |
| TAACGCTGATGAAGCTAGCG+CGG | + | chr2_2:66375688-66375707 | Msa0265960:CDS | 50.0% | |
| TGCTGCTGCTCAGTCCAAAA+AGG | + | chr2_2:66375808-66375827 | Msa0265960:CDS | 50.0% | |
| TGGGGTCTGTTTGGTAAGAC+AGG | + | chr2_2:66376149-66376168 | Msa0265960:intron | 50.0% | |
| AGGAACACCAAGGCTCTGTT+TGG | - | chr2_2:66376593-66376612 | None:intergenic | 50.0% | |
| ACTGCAACTGTGCACTTGGT+AGG | - | chr2_2:66376715-66376734 | None:intergenic | 50.0% | |
| CACAACTGCAACTGTGCACT+TGG | - | chr2_2:66376719-66376738 | None:intergenic | 50.0% | |
| CGTGCAACACCTCAATGTAG+TGG | + | chr2_2:66376798-66376817 | Msa0265960:intron | 50.0% | |
| CCATTGCACCCACTACATTG+AGG | - | chr2_2:66376810-66376829 | None:intergenic | 50.0% | |
| !! | CCTCAATGTAGTGGGTGCAA+TGG | + | chr2_2:66376807-66376826 | Msa0265960:intron | 50.0% |
| GATCACGGATATGGCCATTG+TGG | - | chr2_2:66377072-66377091 | None:intergenic | 50.0% | |
| TGCAGAACACCGTAAGCAAG+TGG | + | chr2_2:66377112-66377131 | Msa0265960:intron | 50.0% | |
| ! | CCGTAAGCAAGTGGTTGATG+TGG | + | chr2_2:66377121-66377140 | Msa0265960:intron | 50.0% |
| TTGCAATTCTCCGTCCTTGG+TGG | - | chr2_2:66377493-66377512 | None:intergenic | 50.0% | |
| CTATCCGCAAATGACGACAC+TGG | + | chr2_2:66377844-66377863 | Msa0265960:intron | 50.0% | |
| ACTGGAGGCTCTTCTACTCA+AGG | - | chr2_2:66377918-66377937 | None:intergenic | 50.0% | |
| TTGAGTAGAAGAGCCTCCAG+TGG | + | chr2_2:66377917-66377936 | Msa0265960:CDS | 50.0% | |
| AAGAGCCTCCAGTGGAAATG+AGG | + | chr2_2:66377925-66377944 | Msa0265960:CDS | 50.0% | |
| TTGGAGGACCTCATTTCCAC+TGG | - | chr2_2:66377936-66377955 | None:intergenic | 50.0% | |
| CACATCTGCTGCTGATATCC+AGG | + | chr2_2:66378030-66378049 | Msa0265960:CDS | 50.0% | |
| ! | TCTTGCGGTGCTTCTTTTCC+TGG | + | chr2_2:66378352-66378371 | Msa0265960:intron | 50.0% |
| ATCAGAAGATGAGGGGCTAG+TGG | - | chr2_2:66379199-66379218 | None:intergenic | 50.0% | |
| TGTCTCCTTGTAGGTTGCTG+TGG | + | chr2_2:66379611-66379630 | Msa0265960:intron | 50.0% | |
| GAAAATGAGATCGGACGCCG+CGG | - | chr2_2:66375629-66375648 | None:intergenic | 55.0% | |
| GCAATGGACGCATTGCGCAT+CGG | + | chr2_2:66376823-66376842 | Msa0265960:intron | 55.0% | |
| ! | CATTGCGCATCGGTCGCATT+AGG | + | chr2_2:66376833-66376852 | Msa0265960:intron | 55.0% |
| TGCGGATGGGATCACGGATA+TGG | - | chr2_2:66377081-66377100 | None:intergenic | 55.0% | |
| GAGGACCTCATTTCCACTGG+AGG | - | chr2_2:66377933-66377952 | None:intergenic | 55.0% | |
| GCTAGCGCGGCTAGAACTGT+TGG | + | chr2_2:66375701-66375720 | Msa0265960:CDS | 60.0% | |
| AGCGCGGCTAGAACTGTTGG+TGG | + | chr2_2:66375704-66375723 | Msa0265960:CDS | 60.0% | |
| ! | GCGGCTAGAACTGTTGGTGG+TGG | + | chr2_2:66375707-66375726 | Msa0265960:CDS | 60.0% |
| ! | GCATCGGTCGCATTAGGCTG+TGG | + | chr2_2:66376839-66376858 | Msa0265960:intron | 60.0% |
| CGGCCGGAGAGAGTGATTGG+TGG | - | chr2_2:66375578-66375597 | None:intergenic | 65.0% | |
| CGACGGCCGGAGAGAGTGAT+TGG | - | chr2_2:66375581-66375600 | None:intergenic | 65.0% | |
| TTGCGGCGGAGAGACGACGA+CGG | - | chr2_2:66375598-66375617 | None:intergenic | 65.0% | |
| GGCGGAGAGACGACGACGGC+CGG | - | chr2_2:66375594-66375613 | None:intergenic | 75.0% | |
| ACGCCGCGGCTCGACGGTTG+CGG | - | chr2_2:66375615-66375634 | None:intergenic | 75.0% | |
| GATCGGACGCCGCGGCTCGA+CGG | - | chr2_2:66375621-66375640 | None:intergenic | 75.0% | |
| ! | CCGCGGCTCGACGGTTGCGG+CGG | - | chr2_2:66375612-66375631 | None:intergenic | 80.0% |
| ! | CCGCCGCAACCGTCGAGCCG+CGG | + | chr2_2:66375609-66375628 | Msa0265960:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 66375367 | 66380056 | 66375367 | ID=Msa0265960;Name=Msa0265960 |
| chr2_2 | mRNA | 66375367 | 66380056 | 66375367 | ID=Msa0265960-mRNA-1;Parent=Msa0265960;Name=Msa0265960-mRNA-1;_AED=0.01;_eAED=0.01;_QI=148|1|1|1|0.83|0.85|7|439|452 |
| chr2_2 | exon | 66375367 | 66375871 | 66375367 | ID=Msa0265960-mRNA-1:exon:21017;Parent=Msa0265960-mRNA-1 |
| chr2_2 | exon | 66377393 | 66377605 | 66377393 | ID=Msa0265960-mRNA-1:exon:21018;Parent=Msa0265960-mRNA-1 |
| chr2_2 | exon | 66377911 | 66378051 | 66377911 | ID=Msa0265960-mRNA-1:exon:21019;Parent=Msa0265960-mRNA-1 |
| chr2_2 | exon | 66378450 | 66378569 | 66378450 | ID=Msa0265960-mRNA-1:exon:21020;Parent=Msa0265960-mRNA-1 |
| chr2_2 | exon | 66378664 | 66378750 | 66378664 | ID=Msa0265960-mRNA-1:exon:21021;Parent=Msa0265960-mRNA-1 |
| chr2_2 | exon | 66379090 | 66379536 | 66379090 | ID=Msa0265960-mRNA-1:exon:21022;Parent=Msa0265960-mRNA-1 |
| chr2_2 | exon | 66379624 | 66380056 | 66379624 | ID=Msa0265960-mRNA-1:exon:21023;Parent=Msa0265960-mRNA-1 |
| chr2_2 | five_prime_UTR | 66375367 | 66375514 | 66375367 | ID=Msa0265960-mRNA-1:five_prime_utr;Parent=Msa0265960-mRNA-1 |
| chr2_2 | CDS | 66375515 | 66375871 | 66375515 | ID=Msa0265960-mRNA-1:cds;Parent=Msa0265960-mRNA-1 |
| chr2_2 | CDS | 66377393 | 66377605 | 66377393 | ID=Msa0265960-mRNA-1:cds;Parent=Msa0265960-mRNA-1 |
| chr2_2 | CDS | 66377911 | 66378051 | 66377911 | ID=Msa0265960-mRNA-1:cds;Parent=Msa0265960-mRNA-1 |
| chr2_2 | CDS | 66378450 | 66378569 | 66378450 | ID=Msa0265960-mRNA-1:cds;Parent=Msa0265960-mRNA-1 |
| chr2_2 | CDS | 66378664 | 66378750 | 66378664 | ID=Msa0265960-mRNA-1:cds;Parent=Msa0265960-mRNA-1 |
| chr2_2 | CDS | 66379090 | 66379530 | 66379090 | ID=Msa0265960-mRNA-1:cds;Parent=Msa0265960-mRNA-1 |
| chr2_2 | three_prime_UTR | 66379531 | 66379536 | 66379531 | ID=Msa0265960-mRNA-1:three_prime_utr;Parent=Msa0265960-mRNA-1 |
| chr2_2 | three_prime_UTR | 66379624 | 66380056 | 66379624 | ID=Msa0265960-mRNA-1:three_prime_utr;Parent=Msa0265960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
