Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302830 | XP_003597463.2 | 94.027 | 452 | 27 | 0 | 1 | 452 | 1 | 452 | 0.0 | 834 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302830 | G7IUE9 | 94.027 | 452 | 27 | 0 | 1 | 452 | 1 | 452 | 0.0 | 834 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0067060 | Msa0302830 | 0.802076 | 6.661557e-49 | -8.615850e-47 |
| Msa0159590 | Msa0302830 | 0.803454 | 3.459119e-49 | -8.615850e-47 |
| Msa0209980 | Msa0302830 | 0.825758 | 3.937099e-54 | -8.615850e-47 |
| Msa0227370 | Msa0302830 | 0.902579 | 8.390755e-79 | -8.615850e-47 |
| Msa0265960 | Msa0302830 | 0.862516 | 4.794294e-64 | -8.615850e-47 |
| Msa0302830 | Msa0367520 | 0.820325 | 7.281983e-53 | -8.615850e-47 |
| Msa0302830 | Msa0422050 | 0.810946 | 8.949000e-51 | -8.615850e-47 |
| Msa0302830 | Msa0514580 | 0.805043 | 1.615090e-49 | -8.615850e-47 |
| Msa0302830 | Msa0550590 | 0.811452 | 6.950526e-51 | -8.615850e-47 |
| Msa0302830 | Msa0567170 | 0.810837 | 9.450721e-51 | -8.615850e-47 |
| Msa0302830 | Msa0571620 | 0.826903 | 2.100649e-54 | -8.615850e-47 |
| Msa0302830 | Msa0606100 | 0.826489 | 2.638152e-54 | -8.615850e-47 |
| Msa0302830 | Msa0615630 | 0.806878 | 6.640430e-50 | -8.615850e-47 |
| Msa0302830 | Msa0621710 | 0.810232 | 1.276935e-50 | -8.615850e-47 |
| Msa0302830 | Msa0647050 | 0.806074 | 9.813354e-50 | -8.615850e-47 |
| Msa0302830 | Msa0658640 | 0.807675 | 4.502805e-50 | -8.615850e-47 |
| Msa0302830 | Msa0698730 | 0.831477 | 1.633136e-55 | -8.615850e-47 |
| Msa0302830 | Msa0703600 | 0.815864 | 7.430986e-52 | -8.615850e-47 |
| Msa0302830 | Msa0709200 | 0.814726 | 1.330032e-51 | -8.615850e-47 |
| Msa0302830 | Msa0735780 | 0.804824 | 1.794636e-49 | -8.615850e-47 |
| Msa0302830 | Msa0773630 | 0.806505 | 7.962794e-50 | -8.615850e-47 |
| Msa0302830 | Msa0828190 | 0.930561 | 1.368482e-93 | -8.615850e-47 |
| Msa0302830 | Msa1033920 | 0.819622 | 1.054154e-52 | -8.615850e-47 |
| Msa0302830 | Msa1078970 | 0.806530 | 7.864640e-50 | -8.615850e-47 |
| Msa0302830 | Msa1081390 | 0.819306 | 1.244745e-52 | -8.615850e-47 |
| Msa0302830 | Msa1116220 | 0.823690 | 1.209342e-53 | -8.615850e-47 |
| Msa0302830 | Msa1116660 | 0.819082 | 1.399686e-52 | -8.615850e-47 |
| Msa0302830 | Msa1132530 | 0.819842 | 9.389924e-53 | -8.615850e-47 |
| Msa0302830 | Msa1148630 | 0.806844 | 6.753679e-50 | -8.615850e-47 |
| Msa0302830 | Msa1162880 | 0.817124 | 3.879740e-52 | -8.615850e-47 |
| Msa0302830 | Msa1214350 | 0.807622 | 4.620015e-50 | -8.615850e-47 |
| Msa0302830 | Msa1226520 | 0.814052 | 1.874764e-51 | -8.615850e-47 |
| Msa0302830 | Msa1244240 | 0.804920 | 1.713502e-49 | -8.615850e-47 |
| Msa0302830 | Msa1254540 | 0.802770 | 4.792782e-49 | -8.615850e-47 |
| Msa0302830 | Msa1263780 | 0.800595 | 1.339031e-48 | -8.615850e-47 |
| Msa0302830 | Msa1305780 | 0.808778 | 2.619925e-50 | -8.615850e-47 |
| Msa0302830 | Msa1306570 | 0.803346 | 3.641811e-49 | -8.615850e-47 |
| Msa0302830 | Msa1339170 | 0.822468 | 2.331544e-53 | -8.615850e-47 |
| Msa0302830 | Msa1375350 | 0.811679 | 6.206298e-51 | -8.615850e-47 |
| Msa0302830 | Msa1426110 | 0.802270 | 6.074594e-49 | -8.615850e-47 |
| Msa0302830 | Msa1446100 | 0.807398 | 5.154868e-50 | -8.615850e-47 |
| Msa0302830 | Msa1453280 | 0.931369 | 4.180939e-94 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302830 | MtrunA17_Chr2g0329061 | 94.027 | 452 | 27 | 0 | 1 | 452 | 1 | 452 | 0.0 | 834 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302830 | AT5G12930.1 | 48.601 | 393 | 176 | 11 | 1 | 384 | 1 | 376 | 4.40e-109 | 330 |
Find 120 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTACAAAACCATATTTAA+TGG | 0.181372 | 2_3:-59737298 | None:intergenic |
| TTTCTTATTGTTGCTGTTAT+TGG | 0.223426 | 2_3:+59733239 | Msa0302830:CDS |
| TAGCCAGCTATTGCTGTCTT+TGG | 0.236408 | 2_3:+59737323 | Msa0302830:three_prime_UTR |
| AAAGAAGGATTTGGTTGTTC+TGG | 0.252617 | 2_3:+59736177 | Msa0302830:CDS |
| GTCAACATTCTACAGGTTTA+TGG | 0.253819 | 2_3:+59737203 | Msa0302830:three_prime_UTR |
| AATTGTAGATTCAGAATTCT+TGG | 0.260695 | 2_3:-59736734 | None:intergenic |
| TTCCTTCTGTAATGAATATA+TGG | 0.287784 | 2_3:+59735041 | Msa0302830:CDS |
| AATGTCTGGCTTGTCGGATT+TGG | 0.295447 | 2_3:+59735454 | Msa0302830:CDS |
| TAGAGAAGGGTGACTTATAT+TGG | 0.298699 | 2_3:-59735409 | None:intergenic |
| CTGAATTAGAAGACATTATA+CGG | 0.313995 | 2_3:+59736128 | Msa0302830:CDS |
| TTCAAAACTAAAGAAGGATT+TGG | 0.320274 | 2_3:+59736168 | Msa0302830:CDS |
| AGCCAGCTATTGCTGTCTTT+GGG | 0.321958 | 2_3:+59737324 | Msa0302830:three_prime_UTR |
| GCATCCAACTCTAAACAAAA+TGG | 0.348180 | 2_3:+59732891 | Msa0302830:five_prime_UTR |
| TTGCAATTAGATGAAACATT+TGG | 0.367954 | 2_3:+59734964 | Msa0302830:CDS |
| TTAAGAAATCCGTTGAGCTT+AGG | 0.369730 | 2_3:+59733306 | Msa0302830:CDS |
| AGATAACCTCATTTATGATA+TGG | 0.377526 | 2_3:+59736624 | Msa0302830:CDS |
| TGTGGCAGCTGAATTTCATT+TGG | 0.377686 | 2_3:-59736595 | None:intergenic |
| TAAGAAGGAATTTCTTTAAG+AGG | 0.384480 | 2_3:-59736838 | None:intergenic |
| TAAGAAATCCGTTGAGCTTA+GGG | 0.394216 | 2_3:+59733307 | Msa0302830:CDS |
| CAGACATTCTTCTCTCCTCT+TGG | 0.398506 | 2_3:-59735439 | None:intergenic |
| AAAATGAAGTCTCACTGGTT+TGG | 0.399324 | 2_3:-59737436 | None:intergenic |
| CAAATAGTGTAGCAAACAAT+AGG | 0.402326 | 2_3:+59737178 | Msa0302830:three_prime_UTR |
| AAGATGTTTATAATCTTAAG+AGG | 0.402964 | 2_3:+59735929 | Msa0302830:CDS |
| TGCTGCTGCTCAGTCCAAAA+AGG | 0.410742 | 2_3:+59733265 | Msa0302830:CDS |
| CCAAAATATGTAAGAACAAA+AGG | 0.411718 | 2_3:-59737112 | None:intergenic |
| CTCAGAAGAGTTTAGCAGAT+TGG | 0.411871 | 2_3:-59735989 | None:intergenic |
| AACAATTTCAAAACTAAAGA+AGG | 0.414561 | 2_3:+59736162 | Msa0302830:CDS |
| CACATCTGCTGCTGATATCC+AGG | 0.416831 | 2_3:+59735487 | Msa0302830:CDS |
| ACAATAAGAAACCGATGAAT+AGG | 0.418221 | 2_3:-59733227 | None:intergenic |
| CAAGAGGAGAGAAGAATGTC+TGG | 0.419161 | 2_3:+59735440 | Msa0302830:CDS |
| GTTCATTAGAGGTTATAAAT+CGG | 0.419698 | 2_3:-59737479 | None:intergenic |
| TGCAGGTTATGCAGCTTTCA+AGG | 0.419818 | 2_3:+59736542 | Msa0302830:intron |
| AATGAGCAGAGGTTCATTAG+AGG | 0.421638 | 2_3:-59737490 | None:intergenic |
| ACGCCGCGGCTCGACGGTTG+CGG | 0.422527 | 2_3:-59733069 | None:intergenic |
| TTCATTAGAGGTTATAAATC+GGG | 0.424201 | 2_3:-59737478 | None:intergenic |
| CGTTAACAACCCGTCCTTGA+AGG | 0.436333 | 2_3:-59733127 | None:intergenic |
| CTCTTGGTCTTCATTAGAGA+AGG | 0.441119 | 2_3:-59735423 | None:intergenic |
| GGTAATGGTGAAGTAGCGTT+AGG | 0.448670 | 2_3:-59732993 | None:intergenic |
| TTTGGTTGTTCTGGAACAAA+AGG | 0.449334 | 2_3:+59736186 | Msa0302830:CDS |
| CGACGGCCGGAGAGAGTGAT+TGG | 0.450699 | 2_3:-59733035 | None:intergenic |
| GACTAATTACTCATTAAGTA+TGG | 0.452612 | 2_3:+59737379 | Msa0302830:three_prime_UTR |
| GTTGCCGTTAGAGTTGTTCA+TGG | 0.453633 | 2_3:-59732970 | None:intergenic |
| TAATTGCAATTCTCCGTCCT+TGG | 0.457323 | 2_3:-59734950 | None:intergenic |
| GTTGGTAGAATGACATCAAC+AGG | 0.459761 | 2_3:-59736712 | None:intergenic |
| TGATGAACTTGCATTTGCTT+GGG | 0.460645 | 2_3:+59733193 | Msa0302830:CDS |
| GAGAAGAATGTCTGGCTTGT+CGG | 0.462441 | 2_3:+59735448 | Msa0302830:CDS |
| GCATTAGATTTCTGATAAGA+AGG | 0.463964 | 2_3:-59736853 | None:intergenic |
| AGATCTTGTGCATTGTTGAC+AGG | 0.464468 | 2_3:-59736688 | None:intergenic |
| TTATGCTCAGTTTAACAACT+TGG | 0.475767 | 2_3:+59735897 | Msa0302830:intron |
| ATTTGGAATACTTGCAGAGA+AGG | 0.479701 | 2_3:-59736578 | None:intergenic |
| AGTTTGTTGATTGCGGTTGT+TGG | 0.481813 | 2_3:+59735001 | Msa0302830:CDS |
| GTGATGAACTTGCATTTGCT+TGG | 0.487161 | 2_3:+59733192 | Msa0302830:CDS |
| ATGAGGTTATCTCTCATTTG+TGG | 0.489300 | 2_3:-59736613 | None:intergenic |
| TTGCAATTCTCCGTCCTTGG+TGG | 0.492663 | 2_3:-59734947 | None:intergenic |
| AAAACAATTGTCACCTCGTA+AGG | 0.497486 | 2_3:+59736894 | Msa0302830:CDS |
| CGATGAAAATGAAGTCTCAC+TGG | 0.502795 | 2_3:-59737441 | None:intergenic |
| AATGAGTAATTAGTCTATGA+AGG | 0.508399 | 2_3:-59737371 | None:intergenic |
| CTGGATTAACCTTCAAGGAC+GGG | 0.510704 | 2_3:+59733118 | Msa0302830:CDS |
| GGCGGAGAGACGACGACGGC+CGG | 0.511854 | 2_3:-59733048 | None:intergenic |
| ATGGCCTGGATTAACCTTCA+AGG | 0.513528 | 2_3:+59733113 | Msa0302830:CDS |
| ATAGGTAGTCAACATTCTAC+AGG | 0.514539 | 2_3:+59737196 | Msa0302830:three_prime_UTR |
| ATCCCAAAGACAGCAATAGC+TGG | 0.514581 | 2_3:-59737326 | None:intergenic |
| CCGCCGCAACCGTCGAGCCG+CGG | 0.517144 | 2_3:+59733066 | Msa0302830:CDS |
| TTGGAGGACCTCATTTCCAC+TGG | 0.518085 | 2_3:-59735390 | None:intergenic |
| AAATTATAGATAGTAGCAGC+AGG | 0.520555 | 2_3:+59737257 | Msa0302830:three_prime_UTR |
| TGAAGGTTAATCCAGGCCAT+TGG | 0.520684 | 2_3:-59733110 | None:intergenic |
| TGTCTCCTTGTAGGTTGCTG+TGG | 0.522837 | 2_3:+59737068 | Msa0302830:intron |
| AGTAGAAGACGATCTCTCAA+TGG | 0.533967 | 2_3:+59736928 | Msa0302830:CDS |
| ATTCCACCAATCACTCTCTC+CGG | 0.534001 | 2_3:+59733029 | Msa0302830:CDS |
| GAGAATGTGACAGAAAATGA+TGG | 0.535570 | 2_3:+59732850 | Msa0302830:five_prime_UTR |
| TACCATATATTCATTACAGA+AGG | 0.538276 | 2_3:-59735043 | None:intergenic |
| GTGCGAGTGCAAATAAGAGA+TGG | 0.543346 | 2_3:+59736959 | Msa0302830:CDS |
| GTAGATTCAGAATTCTTGGT+TGG | 0.551861 | 2_3:-59736730 | None:intergenic |
| CGAATTAAGTTTGTTGATTG+CGG | 0.555870 | 2_3:+59734994 | Msa0302830:CDS |
| AGAAGGGTGACTTATATTGG+AGG | 0.556146 | 2_3:-59735406 | None:intergenic |
| AAGAGCCTCCAGTGGAAATG+AGG | 0.559249 | 2_3:+59735382 | Msa0302830:CDS |
| TAAGAGGGACTGTGATGAGA+AGG | 0.561669 | 2_3:+59735945 | Msa0302830:CDS |
| CCGTCCTTGAAGGTTAATCC+AGG | 0.562538 | 2_3:-59733117 | None:intergenic |
| CCGCGGCTCGACGGTTGCGG+CGG | 0.563817 | 2_3:-59733066 | None:intergenic |
| GGAATACTTGCAGAGAAGGA+TGG | 0.566765 | 2_3:-59736574 | None:intergenic |
| GCTAGCGCGGCTAGAACTGT+TGG | 0.566998 | 2_3:+59733158 | Msa0302830:CDS |
| ACTATCAGAATCAGAAGATG+AGG | 0.570063 | 2_3:-59736662 | None:intergenic |
| AGCGCGGCTAGAACTGTTGG+TGG | 0.575091 | 2_3:+59733161 | Msa0302830:CDS |
| GATCGGACGCCGCGGCTCGA+CGG | 0.576960 | 2_3:-59733075 | None:intergenic |
| GTAATGGTGAAGTAGCGTTA+GGG | 0.578358 | 2_3:-59732992 | None:intergenic |
| TCTTGGTCTTCATTAGAGAA+GGG | 0.582381 | 2_3:-59735422 | None:intergenic |
| GCGGCTAGAACTGTTGGTGG+TGG | 0.584041 | 2_3:+59733164 | Msa0302830:CDS |
| CGGCCGGAGAGAGTGATTGG+TGG | 0.585218 | 2_3:-59733032 | None:intergenic |
| ATCAGAAGATGAGGGGCTAG+TGG | 0.588405 | 2_3:-59736653 | None:intergenic |
| CCTGGATTAACCTTCAAGGA+CGG | 0.589852 | 2_3:+59733117 | Msa0302830:CDS |
| TGCTGTCCATATCATAAATG+AGG | 0.592185 | 2_3:-59736630 | None:intergenic |
| TGCGAGTGCAAATAAGAGAT+GGG | 0.593088 | 2_3:+59736960 | Msa0302830:CDS |
| CTATCAGAATCAGAAGATGA+GGG | 0.593200 | 2_3:-59736661 | None:intergenic |
| TCAGCTGTTATCAAGCATGC+AGG | 0.594282 | 2_3:+59734852 | Msa0302830:CDS |
| AATTTCTTTAAGAGGACTAG+CGG | 0.594712 | 2_3:-59736830 | None:intergenic |
| TTCTGAGGTTGCTAATAGCA+AGG | 0.595094 | 2_3:+59736005 | Msa0302830:CDS |
| TGATAGTATAGTAAATTGAG+AGG | 0.605111 | 2_3:+59732828 | Msa0302830:five_prime_UTR |
| AAGAAGTTATCCACCAAGGA+CGG | 0.607937 | 2_3:+59734937 | Msa0302830:CDS |
| AGATGTTTATAATCTTAAGA+GGG | 0.615181 | 2_3:+59735930 | Msa0302830:CDS |
| ACTGGAGGCTCTTCTACTCA+AGG | 0.617031 | 2_3:-59735372 | None:intergenic |
| ATTGGCTTCGAAAATGAGAT+CGG | 0.626620 | 2_3:-59733092 | None:intergenic |
| GAGGACCTCATTTCCACTGG+AGG | 0.630298 | 2_3:-59735387 | None:intergenic |
| TGTGGAATGTAGCAGAGTAC+AGG | 0.632552 | 2_3:+59737086 | Msa0302830:three_prime_UTR |
| CTTCTCTAATGAAGACCAAG+AGG | 0.641341 | 2_3:+59735424 | Msa0302830:CDS |
| GCTTCCATGAACAACTCTAA+CGG | 0.643301 | 2_3:+59732966 | Msa0302830:exon |
| CAATCTGCTAAACTCTTCTG+AGG | 0.648603 | 2_3:+59735990 | Msa0302830:CDS |
| ATAAGAAACCGATGAATAGG+CGG | 0.650348 | 2_3:-59733224 | None:intergenic |
| TATACATACCCTAAGCTCAA+CGG | 0.651300 | 2_3:-59733315 | None:intergenic |
| GGTGGAATTGAAACGAGACA+TGG | 0.665905 | 2_3:-59733014 | None:intergenic |
| TTGAGTAGAAGAGCCTCCAG+TGG | 0.670401 | 2_3:+59735374 | Msa0302830:CDS |
| ATTGAAACGAGACATGGTAA+TGG | 0.670705 | 2_3:-59733008 | None:intergenic |
| AATTATAGATAGTAGCAGCA+GGG | 0.674088 | 2_3:+59737258 | Msa0302830:three_prime_UTR |
| TATCAGAATCAGAAGATGAG+GGG | 0.677495 | 2_3:-59736660 | None:intergenic |
| CTATAATGAGAAATGAGCAG+AGG | 0.685334 | 2_3:-59737501 | None:intergenic |
| TAACGCTGATGAAGCTAGCG+CGG | 0.686137 | 2_3:+59733145 | Msa0302830:CDS |
| TAGCGGATTGAAATTTCGAG+CGG | 0.704247 | 2_3:-59736813 | None:intergenic |
| GAAAATGAGATCGGACGCCG+CGG | 0.709704 | 2_3:-59733083 | None:intergenic |
| TATCAAGAAGTTATCCACCA+AGG | 0.731353 | 2_3:+59734933 | Msa0302830:CDS |
| AATTAGAAGACATTATACGG+AGG | 0.745017 | 2_3:+59736131 | Msa0302830:CDS |
| TTGCGGCGGAGAGACGACGA+CGG | 0.751092 | 2_3:-59733052 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTATTTGAAAAGCATTT+TGG | + | chr2_3:59733415-59733434 | Msa0302830:intron | 15.0% |
| !!! | TTTTTAAATTAAGATTGTAG+AGG | - | chr2_3:59733811-59733830 | None:intergenic | 15.0% |
| !! | TACTAAATATTGTCAAATAA+TGG | + | chr2_3:59735223-59735242 | Msa0302830:intron | 15.0% |
| !! | TTATAAATACATCATATATC+AGG | + | chr2_3:59735567-59735586 | Msa0302830:intron | 15.0% |
| !! | TAAGAATTTAAAAGTCAAAT+CGG | - | chr2_3:59736375-59736394 | None:intergenic | 15.0% |
| !! | ATTTACAAAACCATATTTAA+TGG | - | chr2_3:59737301-59737320 | None:intergenic | 15.0% |
| !!! | ATTTGTTATAATATTGTTGC+TGG | + | chr2_3:59733365-59733384 | Msa0302830:intron | 20.0% |
| !!! | TTTGTTATAATATTGTTGCT+GGG | + | chr2_3:59733366-59733385 | Msa0302830:intron | 20.0% |
| !!! | TTCAAATTTTCATCAGAAAT+TGG | - | chr2_3:59733393-59733412 | None:intergenic | 20.0% |
| !! | TTGTTATGTTAATAGTCATT+TGG | + | chr2_3:59733586-59733605 | Msa0302830:intron | 20.0% |
| !! | TGTTATGTTAATAGTCATTT+GGG | + | chr2_3:59733587-59733606 | Msa0302830:intron | 20.0% |
| !!! | TGCTTTTGATTTTTTTATCA+TGG | + | chr2_3:59734744-59734763 | Msa0302830:intron | 20.0% |
| !! | TTGAATGTGTGTATTAATAT+TGG | + | chr2_3:59734804-59734823 | Msa0302830:intron | 20.0% |
| !!! | TTATTATATAGCTTTTCACT+TGG | + | chr2_3:59735094-59735113 | Msa0302830:intron | 20.0% |
| !! | AAAAACTTAGTGTTATATAG+CGG | + | chr2_3:59735160-59735179 | Msa0302830:intron | 20.0% |
| !! | AATTAGTAATTGCTTAATTG+TGG | + | chr2_3:59735722-59735741 | Msa0302830:intron | 20.0% |
| !! | ATAGAACTAATAAAAACACA+AGG | - | chr2_3:59735838-59735857 | None:intergenic | 20.0% |
| !! | AAGATGTTTATAATCTTAAG+AGG | + | chr2_3:59735929-59735948 | Msa0302830:CDS | 20.0% |
| !! | AGATGTTTATAATCTTAAGA+GGG | + | chr2_3:59735930-59735949 | Msa0302830:CDS | 20.0% |
| !! | AACAATTTCAAAACTAAAGA+AGG | + | chr2_3:59736162-59736181 | Msa0302830:CDS | 20.0% |
| !! | AAGAATTTAAAAGTCAAATC+GGG | - | chr2_3:59736374-59736393 | None:intergenic | 20.0% |
| !! | TGAAATGCTTCTTATATTAA+TGG | + | chr2_3:59736503-59736522 | Msa0302830:intron | 20.0% |
| !!! | TAAGTTTTAGCCATTAAATA+TGG | + | chr2_3:59737288-59737307 | Msa0302830:three_prime_UTR | 20.0% |
| ! | TGATAGTATAGTAAATTGAG+AGG | + | chr2_3:59732828-59732847 | Msa0302830:five_prime_UTR | 25.0% |
| !!! | TTTGAATTTTGAGTTTGAGA+GGG | - | chr2_3:59732942-59732961 | None:intergenic | 25.0% |
| !! | TTTCTTATTGTTGCTGTTAT+TGG | + | chr2_3:59733239-59733258 | Msa0302830:CDS | 25.0% |
| ! | TTGTTATAATATTGTTGCTG+GGG | + | chr2_3:59733367-59733386 | Msa0302830:intron | 25.0% |
| ! | GTTATGTTAATAGTCATTTG+GGG | + | chr2_3:59733588-59733607 | Msa0302830:intron | 25.0% |
| !! | TTTCACTAAAAAAGACCTTT+TGG | + | chr2_3:59733670-59733689 | Msa0302830:intron | 25.0% |
| ! | TTTCTTTATATCCGATTTAG+AGG | + | chr2_3:59734359-59734378 | Msa0302830:intron | 25.0% |
| !!! | GAATTCGAGATCTTTTAAAA+TGG | + | chr2_3:59734400-59734419 | Msa0302830:intron | 25.0% |
| ! | ATCTTCAATATGAGAAAACT+TGG | + | chr2_3:59734610-59734629 | Msa0302830:intron | 25.0% |
| ! | TTAATACACACATTCAAAGT+TGG | - | chr2_3:59734801-59734820 | None:intergenic | 25.0% |
| ! | TTGCAATTAGATGAAACATT+TGG | + | chr2_3:59734964-59734983 | Msa0302830:CDS | 25.0% |
| ! | TTCCTTCTGTAATGAATATA+TGG | + | chr2_3:59735041-59735060 | Msa0302830:CDS | 25.0% |
| ! | TACCATATATTCATTACAGA+AGG | - | chr2_3:59735046-59735065 | None:intergenic | 25.0% |
| ! | AACTCATATACTTACTGTAT+TGG | + | chr2_3:59735069-59735088 | Msa0302830:intron | 25.0% |
| ! | ACTCATATACTTACTGTATT+GGG | + | chr2_3:59735070-59735089 | Msa0302830:intron | 25.0% |
| ! | TTAGTACTAAATACGTATCA+TGG | - | chr2_3:59735209-59735228 | None:intergenic | 25.0% |
| ! | ATATTGTCAAATAATGGTAG+TGG | + | chr2_3:59735229-59735248 | Msa0302830:intron | 25.0% |
| ! | ATTGACATAGTTAAATGCAA+TGG | + | chr2_3:59735752-59735771 | Msa0302830:intron | 25.0% |
| !!! | TAATTTGTTTTACTCTCTTG+CGG | + | chr2_3:59735794-59735813 | Msa0302830:intron | 25.0% |
| ! | TTGTAGTGAAAATGATAAGT+GGG | - | chr2_3:59736091-59736110 | None:intergenic | 25.0% |
| ! | ATTGTAGTGAAAATGATAAG+TGG | - | chr2_3:59736092-59736111 | None:intergenic | 25.0% |
| ! | CTGAATTAGAAGACATTATA+CGG | + | chr2_3:59736128-59736147 | Msa0302830:CDS | 25.0% |
| ! | TTCAAAACTAAAGAAGGATT+TGG | + | chr2_3:59736168-59736187 | Msa0302830:CDS | 25.0% |
| !! | ACAAAAGGTACATATATACA+TGG | + | chr2_3:59736201-59736220 | Msa0302830:intron | 25.0% |
| ! | TACATGGTAGATATAAACAA+TGG | + | chr2_3:59736217-59736236 | Msa0302830:intron | 25.0% |
| ! | AGATAACCTCATTTATGATA+TGG | + | chr2_3:59736624-59736643 | Msa0302830:CDS | 25.0% |
| ! | AATTGTAGATTCAGAATTCT+TGG | - | chr2_3:59736737-59736756 | None:intergenic | 25.0% |
| ! | CAAAAATCTTAAATTCGTCA+GGG | + | chr2_3:59736776-59736795 | Msa0302830:CDS | 25.0% |
| ! | TAAGAAGGAATTTCTTTAAG+AGG | - | chr2_3:59736841-59736860 | None:intergenic | 25.0% |
| ! | CCAAAATATGTAAGAACAAA+AGG | - | chr2_3:59737115-59737134 | None:intergenic | 25.0% |
| !! | CCTTTTGTTCTTACATATTT+TGG | + | chr2_3:59737112-59737131 | Msa0302830:three_prime_UTR | 25.0% |
| !! | AATGAGTAATTAGTCTATGA+AGG | - | chr2_3:59737374-59737393 | None:intergenic | 25.0% |
| ! | GACTAATTACTCATTAAGTA+TGG | + | chr2_3:59737379-59737398 | Msa0302830:three_prime_UTR | 25.0% |
| ! | TTCATTAGAGGTTATAAATC+GGG | - | chr2_3:59737481-59737500 | None:intergenic | 25.0% |
| ! | GTTCATTAGAGGTTATAAAT+CGG | - | chr2_3:59737482-59737501 | None:intergenic | 25.0% |
| !!! | TATGCCATTTTGTTTAGAGT+TGG | - | chr2_3:59732898-59732917 | None:intergenic | 30.0% |
| !!! | GTTTGAATTTTGAGTTTGAG+AGG | - | chr2_3:59732943-59732962 | None:intergenic | 30.0% |
| ACAATAAGAAACCGATGAAT+AGG | - | chr2_3:59733230-59733249 | None:intergenic | 30.0% | |
| GCAAAATGTTCGTAAATTAG+TGG | + | chr2_3:59733544-59733563 | Msa0302830:intron | 30.0% | |
| !! | TAGTGGTTATGTTAGTTTGT+AGG | + | chr2_3:59733561-59733580 | Msa0302830:intron | 30.0% |
| !! | AGTGGTTATGTTAGTTTGTA+GGG | + | chr2_3:59733562-59733581 | Msa0302830:intron | 30.0% |
| TGTAGTGTTTGGCAAAATTA+GGG | - | chr2_3:59733882-59733901 | None:intergenic | 30.0% | |
| TTGTAGTGTTTGGCAAAATT+AGG | - | chr2_3:59733883-59733902 | None:intergenic | 30.0% | |
| CTGATTGAATTTGTAGTGTT+TGG | - | chr2_3:59733893-59733912 | None:intergenic | 30.0% | |
| TCAAATAGTAGCTTGAGTTA+AGG | - | chr2_3:59734070-59734089 | None:intergenic | 30.0% | |
| ACTATGACAACAACATTTCT+TGG | - | chr2_3:59734118-59734137 | None:intergenic | 30.0% | |
| ACTTATAGCATCCTCTAAAT+CGG | - | chr2_3:59734373-59734392 | None:intergenic | 30.0% | |
| TTCTGCACAGTTATAAATTG+CGG | - | chr2_3:59734556-59734575 | None:intergenic | 30.0% | |
| ! | TTGTTTCATCACTATTTTCC+AGG | + | chr2_3:59734828-59734847 | Msa0302830:intron | 30.0% |
| !! | CGAATTAAGTTTGTTGATTG+CGG | + | chr2_3:59734994-59735013 | Msa0302830:CDS | 30.0% |
| CTCATATACTTACTGTATTG+GGG | + | chr2_3:59735071-59735090 | Msa0302830:intron | 30.0% | |
| !! | AGTTTTTCAATAGACACGTT+AGG | - | chr2_3:59735147-59735166 | None:intergenic | 30.0% |
| ACACTGAAGAAAATAATACC+TGG | - | chr2_3:59735508-59735527 | None:intergenic | 30.0% | |
| AATAAAAACACAAGGAAACC+AGG | - | chr2_3:59735830-59735849 | None:intergenic | 30.0% | |
| TTATGCTCAGTTTAACAACT+TGG | + | chr2_3:59735897-59735916 | Msa0302830:intron | 30.0% | |
| AATTAGAAGACATTATACGG+AGG | + | chr2_3:59736131-59736150 | Msa0302830:CDS | 30.0% | |
| AATGCACCAATAGGTAATTT+AGG | + | chr2_3:59736240-59736259 | Msa0302830:intron | 30.0% | |
| TATGCACCTAAATTACCTAT+TGG | - | chr2_3:59736249-59736268 | None:intergenic | 30.0% | |
| !! | ATTGACTCACTTGTTATTGT+TGG | + | chr2_3:59736274-59736293 | Msa0302830:intron | 30.0% |
| !! | GACGAATTTAAGATTTTTGC+TGG | - | chr2_3:59736775-59736794 | None:intergenic | 30.0% |
| GCAAAAATCTTAAATTCGTC+AGG | + | chr2_3:59736775-59736794 | Msa0302830:CDS | 30.0% | |
| ! | AATTTCTTTAAGAGGACTAG+CGG | - | chr2_3:59736833-59736852 | None:intergenic | 30.0% |
| GCATTAGATTTCTGATAAGA+AGG | - | chr2_3:59736856-59736875 | None:intergenic | 30.0% | |
| CAAATAGTGTAGCAAACAAT+AGG | + | chr2_3:59737178-59737197 | Msa0302830:three_prime_UTR | 30.0% | |
| AAATTATAGATAGTAGCAGC+AGG | + | chr2_3:59737257-59737276 | Msa0302830:three_prime_UTR | 30.0% | |
| AATTATAGATAGTAGCAGCA+GGG | + | chr2_3:59737258-59737277 | Msa0302830:three_prime_UTR | 30.0% | |
| GAGAATGTGACAGAAAATGA+TGG | + | chr2_3:59732850-59732869 | Msa0302830:five_prime_UTR | 35.0% | |
| GCATCCAACTCTAAACAAAA+TGG | + | chr2_3:59732891-59732910 | Msa0302830:five_prime_UTR | 35.0% | |
| ATTGAAACGAGACATGGTAA+TGG | - | chr2_3:59733011-59733030 | None:intergenic | 35.0% | |
| ! | ATTGGCTTCGAAAATGAGAT+CGG | - | chr2_3:59733095-59733114 | None:intergenic | 35.0% |
| TGATGAACTTGCATTTGCTT+GGG | + | chr2_3:59733193-59733212 | Msa0302830:CDS | 35.0% | |
| ! | ATCTTTTTCCGCCTATTCAT+CGG | + | chr2_3:59733216-59733235 | Msa0302830:CDS | 35.0% |
| ATAAGAAACCGATGAATAGG+CGG | - | chr2_3:59733227-59733246 | None:intergenic | 35.0% | |
| ! | GAAAATCTCTCGATCCTTTT+TGG | - | chr2_3:59733282-59733301 | None:intergenic | 35.0% |
| TTAAGAAATCCGTTGAGCTT+AGG | + | chr2_3:59733306-59733325 | Msa0302830:CDS | 35.0% | |
| TAAGAAATCCGTTGAGCTTA+GGG | + | chr2_3:59733307-59733326 | Msa0302830:CDS | 35.0% | |
| TATACATACCCTAAGCTCAA+CGG | - | chr2_3:59733318-59733337 | None:intergenic | 35.0% | |
| GTAGTGTTTGGCAAAATTAG+GGG | - | chr2_3:59733881-59733900 | None:intergenic | 35.0% | |
| ! | AGCTAGCTTATAACTGATAG+CGG | - | chr2_3:59733925-59733944 | None:intergenic | 35.0% |
| !! | TTATAGCGGATAGCTGATAA+TGG | - | chr2_3:59733944-59733963 | None:intergenic | 35.0% |
| !!! | TTTTTTACCAAACAGAGCCT+TGG | + | chr2_3:59734040-59734059 | Msa0302830:intron | 35.0% |
| TTACAATCACCACGCAATTA+CGG | - | chr2_3:59734222-59734241 | None:intergenic | 35.0% | |
| ! | CAATGTGTATTGTTGGTGTT+GGG | - | chr2_3:59734500-59734519 | None:intergenic | 35.0% |
| ACAATGTGTATTGTTGGTGT+TGG | - | chr2_3:59734501-59734520 | None:intergenic | 35.0% | |
| CACAGTTATAAATTGCGGAT+GGG | - | chr2_3:59734551-59734570 | None:intergenic | 35.0% | |
| TATCAAGAAGTTATCCACCA+AGG | + | chr2_3:59734933-59734952 | Msa0302830:CDS | 35.0% | |
| !! | ACTCATTGACTTTGTTAGCA+GGG | + | chr2_3:59735347-59735366 | Msa0302830:intron | 35.0% |
| TAGAGAAGGGTGACTTATAT+TGG | - | chr2_3:59735412-59735431 | None:intergenic | 35.0% | |
| ! | TCTTGGTCTTCATTAGAGAA+GGG | - | chr2_3:59735425-59735444 | None:intergenic | 35.0% |
| GTGTCATCGTTGAATGATAT+TGG | + | chr2_3:59735524-59735543 | Msa0302830:intron | 35.0% | |
| GGTTATCTGTCAAATGATAC+AGG | + | chr2_3:59735588-59735607 | Msa0302830:intron | 35.0% | |
| ! | TCCATGGTCTTGACTTTAAT+TGG | + | chr2_3:59735686-59735705 | Msa0302830:intron | 35.0% |
| TCCAATTAAAGTCAAGACCA+TGG | - | chr2_3:59735690-59735709 | None:intergenic | 35.0% | |
| ! | ATTGGTCAGCTCTTTTATTG+TGG | - | chr2_3:59735974-59735993 | None:intergenic | 35.0% |
| ! | TGCATTTTATTCTCCAGAGT+TGG | + | chr2_3:59736035-59736054 | Msa0302830:intron | 35.0% |
| !! | ATGATAAGTGGGTTAGGAAA+GGG | - | chr2_3:59736080-59736099 | None:intergenic | 35.0% |
| !! | AATGATAAGTGGGTTAGGAA+AGG | - | chr2_3:59736081-59736100 | None:intergenic | 35.0% |
| ! | GTGAAAATGATAAGTGGGTT+AGG | - | chr2_3:59736086-59736105 | None:intergenic | 35.0% |
| ! | AAAGAAGGATTTGGTTGTTC+TGG | + | chr2_3:59736177-59736196 | Msa0302830:CDS | 35.0% |
| !! | TTTGGTTGTTCTGGAACAAA+AGG | + | chr2_3:59736186-59736205 | Msa0302830:CDS | 35.0% |
| AAACAATGGAATGCACCAAT+AGG | + | chr2_3:59736231-59736250 | Msa0302830:intron | 35.0% | |
| !! | ACCTGCAGTCAATTTTGAAA+GGG | - | chr2_3:59736529-59736548 | None:intergenic | 35.0% |
| ! | AACCTGCAGTCAATTTTGAA+AGG | - | chr2_3:59736530-59736549 | None:intergenic | 35.0% |
| ! | ATTTGGAATACTTGCAGAGA+AGG | - | chr2_3:59736581-59736600 | None:intergenic | 35.0% |
| ATGAGGTTATCTCTCATTTG+TGG | - | chr2_3:59736616-59736635 | None:intergenic | 35.0% | |
| TGCTGTCCATATCATAAATG+AGG | - | chr2_3:59736633-59736652 | None:intergenic | 35.0% | |
| TATCAGAATCAGAAGATGAG+GGG | - | chr2_3:59736663-59736682 | None:intergenic | 35.0% | |
| CTATCAGAATCAGAAGATGA+GGG | - | chr2_3:59736664-59736683 | None:intergenic | 35.0% | |
| ACTATCAGAATCAGAAGATG+AGG | - | chr2_3:59736665-59736684 | None:intergenic | 35.0% | |
| GTAGATTCAGAATTCTTGGT+TGG | - | chr2_3:59736733-59736752 | None:intergenic | 35.0% | |
| ! | TACGAGGTGACAATTGTTTT+TGG | - | chr2_3:59736894-59736913 | None:intergenic | 35.0% |
| AAAACAATTGTCACCTCGTA+AGG | + | chr2_3:59736894-59736913 | Msa0302830:CDS | 35.0% | |
| !!! | CTCTTTTTTAAGTCCTTACG+AGG | - | chr2_3:59736910-59736929 | None:intergenic | 35.0% |
| AGTAAGTCAGCTCAAAATTC+TGG | + | chr2_3:59736993-59737012 | Msa0302830:intron | 35.0% | |
| CACGAATAAGCATATGTACA+TGG | - | chr2_3:59737044-59737063 | None:intergenic | 35.0% | |
| ATAGGTAGTCAACATTCTAC+AGG | + | chr2_3:59737196-59737215 | Msa0302830:three_prime_UTR | 35.0% | |
| GTCAACATTCTACAGGTTTA+TGG | + | chr2_3:59737203-59737222 | Msa0302830:three_prime_UTR | 35.0% | |
| ! | AAAATGAAGTCTCACTGGTT+TGG | - | chr2_3:59737439-59737458 | None:intergenic | 35.0% |
| GCTTCCATGAACAACTCTAA+CGG | + | chr2_3:59732966-59732985 | Msa0302830:exon | 40.0% | |
| GTAATGGTGAAGTAGCGTTA+GGG | - | chr2_3:59732995-59733014 | None:intergenic | 40.0% | |
| ! | GATCTCATTTTCGAAGCCAA+TGG | + | chr2_3:59733094-59733113 | Msa0302830:CDS | 40.0% |
| GTGATGAACTTGCATTTGCT+TGG | + | chr2_3:59733192-59733211 | Msa0302830:CDS | 40.0% | |
| ! | ATAGTCATTTGGGGTCTGTT+TGG | + | chr2_3:59733597-59733616 | Msa0302830:intron | 40.0% |
| AGAAAGTGACGGTTACCAAA+AGG | - | chr2_3:59733688-59733707 | None:intergenic | 40.0% | |
| ATAAGCTCGTGAGAAAGTGA+CGG | - | chr2_3:59733699-59733718 | None:intergenic | 40.0% | |
| ! | GCTGATAAGCTAGCTTATAG+CGG | - | chr2_3:59733958-59733977 | None:intergenic | 40.0% |
| ! | GCTGATAAGCTAGCTTATAG+CGG | - | chr2_3:59733958-59733977 | None:intergenic | 40.0% |
| ATAGTAACCAATAGTCCGAG+TGG | + | chr2_3:59734133-59734152 | Msa0302830:intron | 40.0% | |
| ATTACGGAATGATGCAGTTG+CGG | - | chr2_3:59734206-59734225 | None:intergenic | 40.0% | |
| GCTGTGACAATGTGTATTGT+TGG | - | chr2_3:59734507-59734526 | None:intergenic | 40.0% | |
| ATAAATTGCGGATGGGATCA+CGG | - | chr2_3:59734544-59734563 | None:intergenic | 40.0% | |
| GCACAGTTATAAATTGCGGA+TGG | - | chr2_3:59734552-59734571 | None:intergenic | 40.0% | |
| TGGTTGAGCAAGTTTCTCAA+TGG | + | chr2_3:59734630-59734649 | Msa0302830:intron | 40.0% | |
| GGTTGAGCAAGTTTCTCAAT+GGG | + | chr2_3:59734631-59734650 | Msa0302830:intron | 40.0% | |
| AAGAAGTTATCCACCAAGGA+CGG | + | chr2_3:59734937-59734956 | Msa0302830:CDS | 40.0% | |
| TAATTGCAATTCTCCGTCCT+TGG | - | chr2_3:59734953-59734972 | None:intergenic | 40.0% | |
| !! | AGTTTGTTGATTGCGGTTGT+TGG | + | chr2_3:59735001-59735020 | Msa0302830:CDS | 40.0% |
| !!! | TATAGCTTTTCACTTGGTGC+TGG | + | chr2_3:59735100-59735119 | Msa0302830:intron | 40.0% |
| !!! | ATAGCTTTTCACTTGGTGCT+GGG | + | chr2_3:59735101-59735120 | Msa0302830:intron | 40.0% |
| !! | CACTCATTGACTTTGTTAGC+AGG | + | chr2_3:59735346-59735365 | Msa0302830:intron | 40.0% |
| AGAAGGGTGACTTATATTGG+AGG | - | chr2_3:59735409-59735428 | None:intergenic | 40.0% | |
| ! | CTCTTGGTCTTCATTAGAGA+AGG | - | chr2_3:59735426-59735445 | None:intergenic | 40.0% |
| CTTCTCTAATGAAGACCAAG+AGG | + | chr2_3:59735424-59735443 | Msa0302830:CDS | 40.0% | |
| CTCAGAAGAGTTTAGCAGAT+TGG | - | chr2_3:59735992-59736011 | None:intergenic | 40.0% | |
| CAATCTGCTAAACTCTTCTG+AGG | + | chr2_3:59735990-59736009 | Msa0302830:CDS | 40.0% | |
| !! | TTCTGAGGTTGCTAATAGCA+AGG | + | chr2_3:59736005-59736024 | Msa0302830:CDS | 40.0% |
| GAAGTTGCAATTTCCAACTC+TGG | - | chr2_3:59736051-59736070 | None:intergenic | 40.0% | |
| !! | TGATAAGTGGGTTAGGAAAG+GGG | - | chr2_3:59736079-59736098 | None:intergenic | 40.0% |
| TGTGGCAGCTGAATTTCATT+TGG | - | chr2_3:59736598-59736617 | None:intergenic | 40.0% | |
| AGATCTTGTGCATTGTTGAC+AGG | - | chr2_3:59736691-59736710 | None:intergenic | 40.0% | |
| ! | GTTGGTAGAATGACATCAAC+AGG | - | chr2_3:59736715-59736734 | None:intergenic | 40.0% |
| !! | TAGCGGATTGAAATTTCGAG+CGG | - | chr2_3:59736816-59736835 | None:intergenic | 40.0% |
| AGTAGAAGACGATCTCTCAA+TGG | + | chr2_3:59736928-59736947 | Msa0302830:CDS | 40.0% | |
| TGCGAGTGCAAATAAGAGAT+GGG | + | chr2_3:59736960-59736979 | Msa0302830:CDS | 40.0% | |
| CGATGAAAATGAAGTCTCAC+TGG | - | chr2_3:59737444-59737463 | None:intergenic | 40.0% | |
| AATGAGCAGAGGTTCATTAG+AGG | - | chr2_3:59737493-59737512 | None:intergenic | 40.0% | |
| GTTGCCGTTAGAGTTGTTCA+TGG | - | chr2_3:59732973-59732992 | None:intergenic | 45.0% | |
| ! | GGTAATGGTGAAGTAGCGTT+AGG | - | chr2_3:59732996-59733015 | None:intergenic | 45.0% |
| GGTGGAATTGAAACGAGACA+TGG | - | chr2_3:59733017-59733036 | None:intergenic | 45.0% | |
| ATTCCACCAATCACTCTCTC+CGG | + | chr2_3:59733029-59733048 | Msa0302830:CDS | 45.0% | |
| TGAAGGTTAATCCAGGCCAT+TGG | - | chr2_3:59733113-59733132 | None:intergenic | 45.0% | |
| ATGGCCTGGATTAACCTTCA+AGG | + | chr2_3:59733113-59733132 | Msa0302830:CDS | 45.0% | |
| CCTGGATTAACCTTCAAGGA+CGG | + | chr2_3:59733117-59733136 | Msa0302830:CDS | 45.0% | |
| CTGGATTAACCTTCAAGGAC+GGG | + | chr2_3:59733118-59733137 | Msa0302830:CDS | 45.0% | |
| GCTTGAGTTAAGGAACACCA+AGG | - | chr2_3:59734060-59734079 | None:intergenic | 45.0% | |
| AACCAATAGTCCGAGTGGTA+AGG | + | chr2_3:59734138-59734157 | Msa0302830:intron | 45.0% | |
| TTCCTTACCACTCGGACTAT+TGG | - | chr2_3:59734143-59734162 | None:intergenic | 45.0% | |
| ! | GGTTTGAGTTCCTTACCACT+CGG | - | chr2_3:59734151-59734170 | None:intergenic | 45.0% |
| TGCATCATTCCGTAATTGCG+TGG | + | chr2_3:59734210-59734229 | Msa0302830:intron | 45.0% | |
| !! | TGAGGTGTTGCACGGATATT+AGG | - | chr2_3:59734249-59734268 | None:intergenic | 45.0% |
| !! | CACTACATTGAGGTGTTGCA+CGG | - | chr2_3:59734257-59734276 | None:intergenic | 45.0% |
| GTGCAACACCTCAATGTAGT+GGG | + | chr2_3:59734256-59734275 | Msa0302830:intron | 45.0% | |
| ACACATTGTCACAGCCACAA+TGG | + | chr2_3:59734512-59734531 | Msa0302830:intron | 45.0% | |
| CCACATCAACCACTTGCTTA+CGG | - | chr2_3:59734581-59734600 | None:intergenic | 45.0% | |
| ! | CGTAAGCAAGTGGTTGATGT+GGG | + | chr2_3:59734579-59734598 | Msa0302830:intron | 45.0% |
| ! | TGCTTGATAACAGCTGATCC+TGG | - | chr2_3:59734849-59734868 | None:intergenic | 45.0% |
| TCAGCTGTTATCAAGCATGC+AGG | + | chr2_3:59734852-59734871 | Msa0302830:CDS | 45.0% | |
| TGTTCCAGTGTCGTCATTTG+CGG | - | chr2_3:59735308-59735327 | None:intergenic | 45.0% | |
| CAGACATTCTTCTCTCCTCT+TGG | - | chr2_3:59735442-59735461 | None:intergenic | 45.0% | |
| CAAGAGGAGAGAAGAATGTC+TGG | + | chr2_3:59735440-59735459 | Msa0302830:CDS | 45.0% | |
| ! | GAGAAGAATGTCTGGCTTGT+CGG | + | chr2_3:59735448-59735467 | Msa0302830:CDS | 45.0% |
| ! | AATGTCTGGCTTGTCGGATT+TGG | + | chr2_3:59735454-59735473 | Msa0302830:CDS | 45.0% |
| TGTAGCCTGTTTGCATTCCA+TGG | + | chr2_3:59735670-59735689 | Msa0302830:intron | 45.0% | |
| CAAGACCATGGAATGCAAAC+AGG | - | chr2_3:59735678-59735697 | None:intergenic | 45.0% | |
| TAAGAGGGACTGTGATGAGA+AGG | + | chr2_3:59735945-59735964 | Msa0302830:CDS | 45.0% | |
| GCCCTTTCAAAATTGACTGC+AGG | + | chr2_3:59736525-59736544 | Msa0302830:intron | 45.0% | |
| TGCAGGTTATGCAGCTTTCA+AGG | + | chr2_3:59736542-59736561 | Msa0302830:intron | 45.0% | |
| GGAATACTTGCAGAGAAGGA+TGG | - | chr2_3:59736577-59736596 | None:intergenic | 45.0% | |
| GTGCGAGTGCAAATAAGAGA+TGG | + | chr2_3:59736959-59736978 | Msa0302830:CDS | 45.0% | |
| TCGTGTTCATGTCTCCTTGT+AGG | + | chr2_3:59737059-59737078 | Msa0302830:intron | 45.0% | |
| ACATTCCACAGCAACCTACA+AGG | - | chr2_3:59737076-59737095 | None:intergenic | 45.0% | |
| TGTGGAATGTAGCAGAGTAC+AGG | + | chr2_3:59737086-59737105 | Msa0302830:three_prime_UTR | 45.0% | |
| TAGCCAGCTATTGCTGTCTT+TGG | + | chr2_3:59737323-59737342 | Msa0302830:three_prime_UTR | 45.0% | |
| AGCCAGCTATTGCTGTCTTT+GGG | + | chr2_3:59737324-59737343 | Msa0302830:three_prime_UTR | 45.0% | |
| ATCCCAAAGACAGCAATAGC+TGG | - | chr2_3:59737329-59737348 | None:intergenic | 45.0% | |
| ! | CATTTTCGAAGCCAATGGCC+TGG | + | chr2_3:59733099-59733118 | Msa0302830:CDS | 50.0% |
| CCGTCCTTGAAGGTTAATCC+AGG | - | chr2_3:59733120-59733139 | None:intergenic | 50.0% | |
| CGTTAACAACCCGTCCTTGA+AGG | - | chr2_3:59733130-59733149 | None:intergenic | 50.0% | |
| TAACGCTGATGAAGCTAGCG+CGG | + | chr2_3:59733145-59733164 | Msa0302830:CDS | 50.0% | |
| TGCTGCTGCTCAGTCCAAAA+AGG | + | chr2_3:59733265-59733284 | Msa0302830:CDS | 50.0% | |
| TGGGGTCTGTTTGGTAAGAC+AGG | + | chr2_3:59733606-59733625 | Msa0302830:intron | 50.0% | |
| AGGAACACCAAGGCTCTGTT+TGG | - | chr2_3:59734050-59734069 | None:intergenic | 50.0% | |
| ACTGCAACTGTGCACTTGGT+AGG | - | chr2_3:59734172-59734191 | None:intergenic | 50.0% | |
| CACAACTGCAACTGTGCACT+TGG | - | chr2_3:59734176-59734195 | None:intergenic | 50.0% | |
| CGTGCAACACCTCAATGTAG+TGG | + | chr2_3:59734255-59734274 | Msa0302830:intron | 50.0% | |
| CCATTGCACCCACTACATTG+AGG | - | chr2_3:59734267-59734286 | None:intergenic | 50.0% | |
| !! | CCTCAATGTAGTGGGTGCAA+TGG | + | chr2_3:59734264-59734283 | Msa0302830:intron | 50.0% |
| GATCACGGATATGGCCATTG+TGG | - | chr2_3:59734529-59734548 | None:intergenic | 50.0% | |
| TGCAGAACACCGTAAGCAAG+TGG | + | chr2_3:59734569-59734588 | Msa0302830:intron | 50.0% | |
| ! | CCGTAAGCAAGTGGTTGATG+TGG | + | chr2_3:59734578-59734597 | Msa0302830:intron | 50.0% |
| TTGCAATTCTCCGTCCTTGG+TGG | - | chr2_3:59734950-59734969 | None:intergenic | 50.0% | |
| CTATCCGCAAATGACGACAC+TGG | + | chr2_3:59735301-59735320 | Msa0302830:intron | 50.0% | |
| ACTGGAGGCTCTTCTACTCA+AGG | - | chr2_3:59735375-59735394 | None:intergenic | 50.0% | |
| TTGAGTAGAAGAGCCTCCAG+TGG | + | chr2_3:59735374-59735393 | Msa0302830:CDS | 50.0% | |
| AAGAGCCTCCAGTGGAAATG+AGG | + | chr2_3:59735382-59735401 | Msa0302830:CDS | 50.0% | |
| TTGGAGGACCTCATTTCCAC+TGG | - | chr2_3:59735393-59735412 | None:intergenic | 50.0% | |
| CACATCTGCTGCTGATATCC+AGG | + | chr2_3:59735487-59735506 | Msa0302830:CDS | 50.0% | |
| ! | TCTTGCGGTGCTTCTTTTCC+TGG | + | chr2_3:59735809-59735828 | Msa0302830:intron | 50.0% |
| ATCAGAAGATGAGGGGCTAG+TGG | - | chr2_3:59736656-59736675 | None:intergenic | 50.0% | |
| TGTCTCCTTGTAGGTTGCTG+TGG | + | chr2_3:59737068-59737087 | Msa0302830:intron | 50.0% | |
| GAAAATGAGATCGGACGCCG+CGG | - | chr2_3:59733086-59733105 | None:intergenic | 55.0% | |
| GCAATGGACGCATTGCGCAT+CGG | + | chr2_3:59734280-59734299 | Msa0302830:intron | 55.0% | |
| ! | CATTGCGCATCGGTCGCATT+AGG | + | chr2_3:59734290-59734309 | Msa0302830:intron | 55.0% |
| TGCGGATGGGATCACGGATA+TGG | - | chr2_3:59734538-59734557 | None:intergenic | 55.0% | |
| GAGGACCTCATTTCCACTGG+AGG | - | chr2_3:59735390-59735409 | None:intergenic | 55.0% | |
| GCTAGCGCGGCTAGAACTGT+TGG | + | chr2_3:59733158-59733177 | Msa0302830:CDS | 60.0% | |
| AGCGCGGCTAGAACTGTTGG+TGG | + | chr2_3:59733161-59733180 | Msa0302830:CDS | 60.0% | |
| ! | GCGGCTAGAACTGTTGGTGG+TGG | + | chr2_3:59733164-59733183 | Msa0302830:CDS | 60.0% |
| ! | GCATCGGTCGCATTAGGCTG+TGG | + | chr2_3:59734296-59734315 | Msa0302830:intron | 60.0% |
| CGGCCGGAGAGAGTGATTGG+TGG | - | chr2_3:59733035-59733054 | None:intergenic | 65.0% | |
| CGACGGCCGGAGAGAGTGAT+TGG | - | chr2_3:59733038-59733057 | None:intergenic | 65.0% | |
| TTGCGGCGGAGAGACGACGA+CGG | - | chr2_3:59733055-59733074 | None:intergenic | 65.0% | |
| GGCGGAGAGACGACGACGGC+CGG | - | chr2_3:59733051-59733070 | None:intergenic | 75.0% | |
| ACGCCGCGGCTCGACGGTTG+CGG | - | chr2_3:59733072-59733091 | None:intergenic | 75.0% | |
| GATCGGACGCCGCGGCTCGA+CGG | - | chr2_3:59733078-59733097 | None:intergenic | 75.0% | |
| ! | CCGCGGCTCGACGGTTGCGG+CGG | - | chr2_3:59733069-59733088 | None:intergenic | 80.0% |
| ! | CCGCCGCAACCGTCGAGCCG+CGG | + | chr2_3:59733066-59733085 | Msa0302830:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 59732824 | 59737513 | 59732824 | ID=Msa0302830;Name=Msa0302830 |
| chr2_3 | mRNA | 59732824 | 59737513 | 59732824 | ID=Msa0302830-mRNA-1;Parent=Msa0302830;Name=Msa0302830-mRNA-1;_AED=0.02;_eAED=0.02;_QI=148|1|1|1|0.83|0.71|7|439|452 |
| chr2_3 | exon | 59732824 | 59733328 | 59732824 | ID=Msa0302830-mRNA-1:exon:19417;Parent=Msa0302830-mRNA-1 |
| chr2_3 | exon | 59734850 | 59735062 | 59734850 | ID=Msa0302830-mRNA-1:exon:19418;Parent=Msa0302830-mRNA-1 |
| chr2_3 | exon | 59735368 | 59735508 | 59735368 | ID=Msa0302830-mRNA-1:exon:19419;Parent=Msa0302830-mRNA-1 |
| chr2_3 | exon | 59735907 | 59736026 | 59735907 | ID=Msa0302830-mRNA-1:exon:19420;Parent=Msa0302830-mRNA-1 |
| chr2_3 | exon | 59736121 | 59736207 | 59736121 | ID=Msa0302830-mRNA-1:exon:19421;Parent=Msa0302830-mRNA-1 |
| chr2_3 | exon | 59736547 | 59736993 | 59736547 | ID=Msa0302830-mRNA-1:exon:19422;Parent=Msa0302830-mRNA-1 |
| chr2_3 | exon | 59737081 | 59737513 | 59737081 | ID=Msa0302830-mRNA-1:exon:19423;Parent=Msa0302830-mRNA-1 |
| chr2_3 | five_prime_UTR | 59732824 | 59732971 | 59732824 | ID=Msa0302830-mRNA-1:five_prime_utr;Parent=Msa0302830-mRNA-1 |
| chr2_3 | CDS | 59732972 | 59733328 | 59732972 | ID=Msa0302830-mRNA-1:cds;Parent=Msa0302830-mRNA-1 |
| chr2_3 | CDS | 59734850 | 59735062 | 59734850 | ID=Msa0302830-mRNA-1:cds;Parent=Msa0302830-mRNA-1 |
| chr2_3 | CDS | 59735368 | 59735508 | 59735368 | ID=Msa0302830-mRNA-1:cds;Parent=Msa0302830-mRNA-1 |
| chr2_3 | CDS | 59735907 | 59736026 | 59735907 | ID=Msa0302830-mRNA-1:cds;Parent=Msa0302830-mRNA-1 |
| chr2_3 | CDS | 59736121 | 59736207 | 59736121 | ID=Msa0302830-mRNA-1:cds;Parent=Msa0302830-mRNA-1 |
| chr2_3 | CDS | 59736547 | 59736987 | 59736547 | ID=Msa0302830-mRNA-1:cds;Parent=Msa0302830-mRNA-1 |
| chr2_3 | three_prime_UTR | 59736988 | 59736993 | 59736988 | ID=Msa0302830-mRNA-1:three_prime_utr;Parent=Msa0302830-mRNA-1 |
| chr2_3 | three_prime_UTR | 59737081 | 59737513 | 59737081 | ID=Msa0302830-mRNA-1:three_prime_utr;Parent=Msa0302830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
