AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1261050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261050 MtrunA17_Chr4g0062781 94.651 673 29 3 1 673 1 666 0.0 1209
Msa1261050 MtrunA17_Chr6g0475401 58.824 119 49 0 1 119 1 119 7.71e-42 159
Msa1261050 MtrunA17_Chr6g0475401 29.474 285 136 9 416 668 282 533 2.43e-23 104
Msa1261050 MtrunA17_Chr4g0033751 55.000 120 54 0 1 120 1 120 1.68e-39 155
Msa1261050 MtrunA17_Chr4g0033751 25.523 478 229 16 297 662 245 707 3.61e-21 98.6
Msa1261050 MtrunA17_Chr2g0329581 56.198 121 52 1 1 120 1 121 8.17e-39 153
Msa1261050 MtrunA17_Chr5g0413621 48.760 121 61 1 1 120 1 121 4.84e-33 134
Msa1261050 MtrunA17_Chr2g0309091 45.082 122 61 2 1 120 1 118 1.99e-21 99.0
Msa1261050 MtrunA17_Chr6g0475421 32.787 122 66 5 560 668 8 126 2.20e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1261050 AT4G13370.1 52.707 702 269 20 1 669 1 672 0.0 620
Msa1261050 AT3G14170.1 53.600 125 58 0 1 125 1 125 3.15e-39 152
Msa1261050 AT3G14170.1 33.058 242 145 8 426 662 269 498 8.72e-21 96.7
Msa1261050 AT3G14170.2 53.600 125 58 0 1 125 1 125 3.20e-39 152
Msa1261050 AT3G14170.2 33.058 242 145 8 426 662 270 499 8.46e-21 96.7
Msa1261050 AT1G08760.1 54.167 120 55 0 1 120 1 120 9.64e-38 150
Msa1261050 AT1G08760.1 25.229 436 223 15 320 660 293 720 1.81e-21 100
Msa1261050 AT1G23790.1 48.760 121 61 1 1 120 1 121 3.04e-31 129
Msa1261050 AT1G23790.1 25.442 283 177 6 336 610 220 476 1.30e-11 68.2
Msa1261050 AT1G70340.1 46.667 120 63 1 1 119 1 120 1.09e-28 120
Msa1261050 AT3G19610.1 40.833 120 70 1 1 119 29 148 3.92e-23 104
Msa1261050 AT3G19610.1 25.694 288 172 7 409 663 331 609 6.21e-15 79.0
Msa1261050 AT2G31920.1 39.583 144 68 6 1 126 1 143 2.99e-18 89.4

Find 192 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTGCTTGTAGGAGTTTA+AGG 0.150497 8_2:-63321861 None:intergenic
AATCAAAGTCCCTCTCTCTT+TGG 0.253431 8_2:+63324035 Msa1261050:CDS
CAAATGCGTGGTTCCGAGTT+TGG 0.263001 8_2:+63322524 Msa1261050:CDS
GCTAGCTTATGAAGTTGATT+AGG 0.264854 8_2:+63324608 Msa1261050:three_prime_UTR
CTCAATAACCGTCTTCAATT+AGG 0.282819 8_2:+63322057 Msa1261050:CDS
ATCAAAGTCCCTCTCTCTTT+GGG 0.286985 8_2:+63324036 Msa1261050:CDS
CTCTTCTCCTCAAAGTTGTT+TGG 0.293151 8_2:+63323166 Msa1261050:CDS
TAAGGATTAGGCCTGGTGTT+AGG 0.298738 8_2:-63321843 None:intergenic
CTTGTAGGAGTTTAAGGATT+AGG 0.303053 8_2:-63321855 None:intergenic
CAGCCAGTGCGATTGATCTT+AGG 0.304082 8_2:-63323970 None:intergenic
CTAGCTTATGAAGTTGATTA+GGG 0.311335 8_2:+63324609 Msa1261050:three_prime_UTR
CGAAGACCGCAAGGAAGAAT+TGG 0.318023 8_2:+63322793 Msa1261050:CDS
TCTTTGGGTTGAAGCTGCTT+TGG 0.323248 8_2:+63324051 Msa1261050:CDS
GGAGAAATGGAAGCTCTTCT+AGG 0.336586 8_2:-63322657 None:intergenic
GAAGCAGGATTTAAAGTGTT+TGG 0.350982 8_2:+63324274 Msa1261050:CDS
AATGTATAATAAGAAATTTA+AGG 0.353960 8_2:+63323651 Msa1261050:CDS
AAATCCAAGTTTGCAGGTCT+TGG 0.376268 8_2:+63323197 Msa1261050:CDS
CTGTGTCTGGCAAACTTTCA+AGG 0.377282 8_2:+63323273 Msa1261050:CDS
CAATCTTCTCCCCGGAGAAA+TGG 0.380821 8_2:-63322670 None:intergenic
TCACAATCTGCAGGGAAGTT+TGG 0.388321 8_2:+63322432 Msa1261050:CDS
ATGCGAGCTACGAGTGGTTC+CGG 0.389994 8_2:-63322177 None:intergenic
GCCACCAAGACCTGCAAACT+TGG 0.401930 8_2:-63323201 None:intergenic
CGCCGGAGATGAAAATCTCT+TGG 0.404020 8_2:-63322397 None:intergenic
TTCATCTTCCCCGCCGGAGA+TGG 0.407138 8_2:-63322477 None:intergenic
TTACAATTCATGAAAAGAAA+TGG 0.412348 8_2:+63323225 Msa1261050:CDS
GTTCCTCTTGATGCTGTGTC+TGG 0.415818 8_2:+63323260 Msa1261050:CDS
TCTGGCAAACTTTCAAGGCT+TGG 0.416539 8_2:+63323278 Msa1261050:CDS
ACACTTTAAATCCTGCTTCA+AGG 0.421734 8_2:-63324270 None:intergenic
TCTACCTCCAAACAACTTTG+AGG 0.422189 8_2:-63323173 None:intergenic
AAGATTTCTGATATGTTGGC+TGG 0.422950 8_2:+63322765 Msa1261050:CDS
TTCTAAGATTTCTGATATGT+TGG 0.426049 8_2:+63322761 Msa1261050:CDS
TAGAAGAGCTTCCATTTCTC+CGG 0.433087 8_2:+63322659 Msa1261050:CDS
TTGTGCGGTGGTTGTGTTGG+TGG 0.437876 8_2:-63322271 None:intergenic
AAGGGGTGGCGCGTGGGGAG+AGG 0.444224 8_2:-63322144 None:intergenic
AGCGATCAACGTAGAGGAAC+TGG 0.452421 8_2:-63322080 None:intergenic
TTGAGAATGAGATCGGTGTC+AGG 0.454295 8_2:-63322039 None:intergenic
CACTTTAAATCCTGCTTCAA+GGG 0.454714 8_2:-63324269 None:intergenic
CGACGAAGGGGTGGCGCGTG+GGG 0.457884 8_2:-63322149 None:intergenic
AAGGATTAGGCCTGGTGTTA+GGG 0.458175 8_2:-63321842 None:intergenic
ATGGAAGCTCTTCTAGGATT+CGG 0.459733 8_2:-63322651 None:intergenic
AGGGACTTTGATTGACATGT+TGG 0.460176 8_2:-63324025 None:intergenic
GCGAAGAAGAAGATGGTAGC+TGG 0.461789 8_2:+63322735 Msa1261050:CDS
TTGTTGTTGATTGATCTGAA+TGG 0.461960 8_2:-63322298 None:intergenic
TCTTAGGACATCATCATAGA+TGG 0.462692 8_2:-63323954 None:intergenic
ACATCTAAGAGTCAAGGAAA+TGG 0.463265 8_2:+63324169 Msa1261050:CDS
GGATCATCGGAATCTGATAA+TGG 0.463605 8_2:-63322231 None:intergenic
TGTCGGTGTTCATTGCTTGT+AGG 0.464305 8_2:-63321870 None:intergenic
TTGGACCGCGTGGTTTCTAA+AGG 0.464455 8_2:+63324388 Msa1261050:CDS
ATTTAACCATTGAGTCATCA+TGG 0.467127 8_2:-63324680 None:intergenic
GTAGAGAAATCCAAGTTTGC+AGG 0.469399 8_2:+63323191 Msa1261050:CDS
AAAATAATTCAGGATGAAGC+AGG 0.470051 8_2:-63324508 None:intergenic
TCCGACGAAGGGGTGGCGCG+TGG 0.470364 8_2:-63322151 None:intergenic
CGGGTACAATTCCGATGAGT+TGG 0.471036 8_2:-63321927 None:intergenic
GTTGAAGAATCCCTTGAAGC+AGG 0.472477 8_2:+63324259 Msa1261050:CDS
AGGACAATCGGAAGGTTTCA+CGG 0.472653 8_2:+63322559 Msa1261050:CDS
TGTTGTTGATTGATCTGAAT+GGG 0.478239 8_2:-63322297 None:intergenic
TATTATACATTCAGTAGCAT+TGG 0.478800 8_2:-63323639 None:intergenic
GGCTGCTTCCTTGCCGTCGT+CGG 0.478828 8_2:-63322624 None:intergenic
AGAAGAGCTTCCATTTCTCC+GGG 0.485310 8_2:+63322660 Msa1261050:CDS
TCCAAGTTTGCAGGTCTTGG+TGG 0.486001 8_2:+63323200 Msa1261050:CDS
AGATTGTGCGGTGGTTGTGT+TGG 0.486412 8_2:-63322274 None:intergenic
CTCCATCAGAACTTCAGAAA+AGG 0.488000 8_2:+63324122 Msa1261050:CDS
TTCTCCTCAAAGTTGTTTGG+AGG 0.492108 8_2:+63323169 Msa1261050:CDS
CCGACGAAGGGGTGGCGCGT+GGG 0.494772 8_2:-63322150 None:intergenic
AACCTAAAGAAAAGAGTGTT+GGG 0.495676 8_2:+63322838 Msa1261050:CDS
GAAGACCGCAAGGAAGAATT+GGG 0.496500 8_2:+63322794 Msa1261050:CDS
GAGTGTTGGGTCTAAAACTA+GGG 0.500304 8_2:+63322851 Msa1261050:CDS
TGGACCGCGTGGTTTCTAAA+GGG 0.500717 8_2:+63324389 Msa1261050:CDS
TTAAATCAAACTCGAAGTTA+CGG 0.502752 8_2:-63324637 None:intergenic
TGCTGCTGCAGCATTAGAAG+AGG 0.503717 8_2:+63323616 Msa1261050:CDS
AGATGAACAATGTTCATTCA+CGG 0.504841 8_2:+63322340 Msa1261050:CDS
AGAGTGTTGGGTCTAAAACT+AGG 0.505716 8_2:+63322850 Msa1261050:CDS
TTTCTGATTTACTTTGACTG+TGG 0.505935 8_2:+63324534 Msa1261050:three_prime_UTR
TAGACAGCCGTCTCCGACGA+CGG 0.506706 8_2:+63322611 Msa1261050:CDS
TGACAGAAGGAAGAGGGGTG+TGG 0.507074 8_2:-63322110 None:intergenic
ACCACGCATTTGGACGGTAC+TGG 0.508883 8_2:-63322513 None:intergenic
TGGTTCCGGCGTTCCGACGA+AGG 0.509243 8_2:-63322163 None:intergenic
AACAAACCATGATGACTCAA+TGG 0.509923 8_2:+63324674 Msa1261050:three_prime_UTR
ATGAAAGAAACACTGGAGCT+TGG 0.510836 8_2:+63324193 Msa1261050:CDS
TTCCTTGCCGTCGTCGGAGA+CGG 0.511810 8_2:-63322618 None:intergenic
AACACCGACACACGTGTCAC+CGG 0.513735 8_2:+63321883 Msa1261050:CDS
GGTTCCGGCGTTCCGACGAA+GGG 0.515235 8_2:-63322162 None:intergenic
GCTAAACGATCACAATCTGC+AGG 0.518004 8_2:+63322423 Msa1261050:CDS
TTTCTGCTCGAGAGGACAAT+CGG 0.518876 8_2:+63322547 Msa1261050:CDS
CTCGGAACCACGCATTTGGA+CGG 0.520785 8_2:-63322519 None:intergenic
GTTGAGAAAGAAGCCTTCGT+TGG 0.523258 8_2:-63321974 None:intergenic
AAGAGGAGAACGGTGGTCGC+CGG 0.524267 8_2:-63321902 None:intergenic
CCCACGCGCCACCCCTTCGT+CGG 0.526098 8_2:+63322150 Msa1261050:CDS
TGGGATGAACAAAATGTTGA+AGG 0.528068 8_2:+63322813 Msa1261050:CDS
GTGAATTGAGTGTGTGTGTG+TGG 0.528700 8_2:-63321798 None:intergenic
CATGAAAAGAAATGGACTGA+TGG 0.533330 8_2:+63323233 Msa1261050:CDS
GAACCTAAAGAAAAGAGTGT+TGG 0.534909 8_2:+63322837 Msa1261050:CDS
GCCGGAGATGAAAATCTCTT+GGG 0.539325 8_2:-63322396 None:intergenic
TCCGATCTCTTCTCCAACGA+AGG 0.541927 8_2:+63321961 Msa1261050:CDS
GGACAATCGGAAGGTTTCAC+GGG 0.547990 8_2:+63322560 Msa1261050:CDS
ATACAAAGAAAGAGGATCAT+CGG 0.547997 8_2:-63322244 None:intergenic
GTTGGAGAAGAGATCGGAGC+TGG 0.548071 8_2:-63321956 None:intergenic
GAAGCGAGTAAATGCATGGT+TGG 0.550345 8_2:+63324369 Msa1261050:CDS
AACTTGTCTATGGTTGGCAA+AGG 0.553870 8_2:-63323926 None:intergenic
CAAAAGTTGATCCTACATGC+TGG 0.555614 8_2:-63324471 None:intergenic
TGGGAAGAAAGCATTGCCTC+TGG 0.557044 8_2:+63324312 Msa1261050:CDS
TACTGAGAGAGATCCATCTC+CGG 0.557146 8_2:+63322464 Msa1261050:CDS
GTGGAGAGATACAAAGAAAG+AGG 0.558315 8_2:-63322252 None:intergenic
GATGAAAATCTCTTGGGCGT+TGG 0.559728 8_2:-63322390 None:intergenic
GGACGAATGTTGGTGACAGA+AGG 0.561250 8_2:-63322123 None:intergenic
TCTCCGGGGAGAAGATTGTC+CGG 0.562207 8_2:+63322675 Msa1261050:CDS
TTCATCCCAATTCTTCCTTG+CGG 0.563471 8_2:-63322799 None:intergenic
GAGTTTGGTTTCTGCTCGAG+AGG 0.563793 8_2:+63322539 Msa1261050:CDS
CAAACTTTCAAGGCTTGGAA+AGG 0.566906 8_2:+63323283 Msa1261050:CDS
GAGATCGGAGCTGGATAAAG+CGG 0.567835 8_2:-63321947 None:intergenic
TGCTCGAGAGGACAATCGGA+AGG 0.568084 8_2:+63322551 Msa1261050:CDS
CCGGCGTTCCGACGAAGGGG+TGG 0.569095 8_2:-63322158 None:intergenic
TACTGTCAGAAATGCAAATG+TGG 0.570442 8_2:+63324224 Msa1261050:CDS
GAGAGAGATCCATCTCCGGC+GGG 0.573784 8_2:+63322468 Msa1261050:CDS
GGCGTTGGTAAATTATCTCG+TGG 0.574664 8_2:-63322375 None:intergenic
CGAAGAAGAAGATGGTAGCT+GGG 0.578184 8_2:+63322736 Msa1261050:CDS
TCTCCTCTTCTCCAACTCAT+CGG 0.580371 8_2:+63321916 Msa1261050:CDS
AAATAATTCAGGATGAAGCA+GGG 0.580487 8_2:-63324507 None:intergenic
GGAATCTGATAATGGTTGAA+TGG 0.580488 8_2:-63322223 None:intergenic
TTTGGCAGGTTGCAATGACA+AGG 0.581622 8_2:+63323072 Msa1261050:intron
AAATGGAATGAAAGAAACAC+TGG 0.581658 8_2:+63324186 Msa1261050:CDS
TTCTACTGCGAAGAAGAAGA+TGG 0.582612 8_2:+63322728 Msa1261050:CDS
AGCCGTCTCCGACGACGGCA+AGG 0.583416 8_2:+63322616 Msa1261050:CDS
GCAGTAGAATCTCCAACAGC+CGG 0.584352 8_2:-63322714 None:intergenic
ATGTGACAAAACAATAGCAA+TGG 0.584972 8_2:-63324344 None:intergenic
CTTAACACATCTAAGAGTCA+AGG 0.586977 8_2:+63324163 Msa1261050:CDS
GTGAGAGAGAAGAACGTAGG+TGG 0.587901 8_2:-63322016 None:intergenic
CGTGGGGAGAGGACGAATGT+TGG 0.589608 8_2:-63322133 None:intergenic
CCACCCCTTCGTCGGAACGC+CGG 0.591684 8_2:+63322158 Msa1261050:CDS
TTAGAGCTTGTTTGTCAATG+TGG 0.593742 8_2:+63324703 Msa1261050:three_prime_UTR
CAGCTTCAACCCAAAGAGAG+AGG 0.595158 8_2:-63324045 None:intergenic
TGTTGGTGACAGAAGGAAGA+GGG 0.595214 8_2:-63322116 None:intergenic
AGGAGTTTAAGGATTAGGCC+TGG 0.595603 8_2:-63321850 None:intergenic
AGATCGGAGCTGGATAAAGC+GGG 0.597846 8_2:-63321946 None:intergenic
CTGGATCTGCGAAGACCGCA+AGG 0.598697 8_2:+63322784 Msa1261050:CDS
TGGCTTTACACACAGAGCAA+AGG 0.599456 8_2:-63323898 None:intergenic
AAAGCATTGCCTCTGGATGG+TGG 0.600362 8_2:+63324319 Msa1261050:CDS
ACGGTTATTGAGAATGAGAT+CGG 0.601632 8_2:-63322046 None:intergenic
CCACCGGACAATCTTCTCCC+CGG 0.602241 8_2:-63322678 None:intergenic
GCCTTCGTTGGAGAAGAGAT+CGG 0.602669 8_2:-63321962 None:intergenic
CGGCGAAAACTTGATTCCAC+CGG 0.606042 8_2:-63322694 None:intergenic
AGCTTCAACCCAAAGAGAGA+GGG 0.609684 8_2:-63324044 None:intergenic
TTAGATGTGTTAAGAGAGTG+TGG 0.612226 8_2:-63324154 None:intergenic
ATTCCGATGAGTTGGAGAAG+AGG 0.613210 8_2:-63321919 None:intergenic
TTGCCAGACACAGCATCAAG+AGG 0.613318 8_2:-63323263 None:intergenic
TGAGAATGAGATCGGTGTCA+GGG 0.613668 8_2:-63322038 None:intergenic
GATCTCTTCATCTTCCCCGC+CGG 0.614124 8_2:-63322483 None:intergenic
AAATTATCTCGTGGAGCAAG+TGG 0.614804 8_2:-63322366 None:intergenic
GAATCCAGGATGCAATGGAA+AGG 0.616518 8_2:+63323573 Msa1261050:intron
TTGGAGAGAGTGCTAGTGGT+GGG 0.617153 8_2:+63324293 Msa1261050:CDS
GAACTGAATCCAGGATGCAA+TGG 0.617581 8_2:+63323568 Msa1261050:intron
ACCAGTACCGTCCAAATGCG+TGG 0.618889 8_2:+63322512 Msa1261050:CDS
TGGAGTTGAGAGAATCAGAG+AGG 0.621797 8_2:-63321996 None:intergenic
ATTTGAAGCGAGTAAATGCA+TGG 0.624105 8_2:+63324365 Msa1261050:CDS
GTGTTTGGAGAGAGTGCTAG+TGG 0.625689 8_2:+63324289 Msa1261050:CDS
GTTGGTGACAGAAGGAAGAG+GGG 0.626731 8_2:-63322115 None:intergenic
AATAATTCAGGATGAAGCAG+GGG 0.629849 8_2:-63324506 None:intergenic
TGTCCTAAGATCAATCGCAC+TGG 0.634675 8_2:+63323967 Msa1261050:CDS
GCTCTTCTAGGATTCGGCGA+AGG 0.635698 8_2:-63322645 None:intergenic
AAGAAAGCATTGCCTCTGGA+TGG 0.635733 8_2:+63324316 Msa1261050:CDS
AAATGCATGGTTGGACCGCG+TGG 0.636414 8_2:+63324378 Msa1261050:CDS
ATGTTGGTGACAGAAGGAAG+AGG 0.638385 8_2:-63322117 None:intergenic
ATGGTGAAATGACGAGTGGT+AGG 0.640964 8_2:-63322204 None:intergenic
GATGTTGATATTCTGATGAA+AGG 0.641921 8_2:+63324556 Msa1261050:three_prime_UTR
AGAGATGTTGTTATACAGAG+CGG 0.642445 8_2:-63321770 None:intergenic
TGAGAGAGATCCATCTCCGG+CGG 0.647470 8_2:+63322467 Msa1261050:CDS
GGTGAAATGCGAGCTACGAG+TGG 0.649783 8_2:-63322183 None:intergenic
ACAATGGCTTCCCTAACACC+AGG 0.650124 8_2:+63321832 Msa1261050:exon
TTCACAACACAACACAACAA+TGG 0.651685 8_2:+63321816 Msa1261050:exon
GACGGCTGTCTATACCTCGA+CGG 0.652957 8_2:-63322600 None:intergenic
TGAGTTGGAGAAGAGGAGAA+CGG 0.654800 8_2:-63321912 None:intergenic
GGATACTATCTGAAGATCAG+TGG 0.655304 8_2:-63324074 None:intergenic
TCTCGAGCAGAAACCAAACT+CGG 0.655575 8_2:-63322537 None:intergenic
GTCGCCGGTGACACGTGTGT+CGG 0.656725 8_2:-63321887 None:intergenic
TTTGGAGAGAGTGCTAGTGG+TGG 0.657547 8_2:+63324292 Msa1261050:CDS
GTTCCGGCGTTCCGACGAAG+GGG 0.658890 8_2:-63322161 None:intergenic
AGAGAGATCCATCTCCGGCG+GGG 0.662479 8_2:+63322469 Msa1261050:CDS
GGAACTGGCCTAATTGAAGA+CGG 0.663692 8_2:-63322065 None:intergenic
AGGGTGAGAGAGAAGAACGT+AGG 0.672472 8_2:-63322019 None:intergenic
AATGAAAGCGATCAACGTAG+AGG 0.674194 8_2:-63322086 None:intergenic
GATCTGAATGGGAGATTGTG+CGG 0.674327 8_2:-63322286 None:intergenic
CCGCAATTATTGTTCCGTCG+AGG 0.674338 8_2:+63322586 Msa1261050:CDS
CTAAACGATCACAATCTGCA+GGG 0.675497 8_2:+63322424 Msa1261050:CDS
GCAATGGAGCCACCATCCAG+AGG 0.690113 8_2:-63324328 None:intergenic
CCGGGGAGAAGATTGTCCGG+TGG 0.691617 8_2:+63322678 Msa1261050:CDS
CCTCGACGGAACAATAATTG+CGG 0.694736 8_2:-63322586 None:intergenic
AATCAAACTCGAAGTTACGG+CGG 0.702084 8_2:-63324634 None:intergenic
GAAGAGCTTCCATTTCTCCG+GGG 0.716426 8_2:+63322661 Msa1261050:CDS
CTGAATGGGAGATTGTGCGG+TGG 0.722182 8_2:-63322283 None:intergenic
GTTGGAGAAGAGGAGAACGG+TGG 0.749997 8_2:-63321909 None:intergenic
TTGAATGGTGAAATGACGAG+TGG 0.756930 8_2:-63322208 None:intergenic
GATTCCCTTTAGAAACCACG+CGG 0.796785 8_2:-63324393 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GCTAATTTTTTTTTTTATAT+AGG + chr8_2:63322926-63322945 Msa1261050:intron 10.0%
!! AATGTATAATAAGAAATTTA+AGG + chr8_2:63323651-63323670 Msa1261050:CDS 10.0%
!! TTAATTAATGAATGCTTAAT+TGG + chr8_2:63322956-63322975 Msa1261050:intron 15.0%
!! AAATTAAAGAGAAAAATCTA+TGG + chr8_2:63324439-63324458 Msa1261050:CDS 15.0%
!! TTACAATTCATGAAAAGAAA+TGG + chr8_2:63323225-63323244 Msa1261050:CDS 20.0%
!!! AATTTAACATTCATTTCTAG+TGG + chr8_2:63323319-63323338 Msa1261050:intron 20.0%
!! TCAGAAAACAAAAATAATTC+AGG - chr8_2:63324521-63324540 None:intergenic 20.0%
!!! TTCTAAGATTTCTGATATGT+TGG + chr8_2:63322761-63322780 Msa1261050:CDS 25.0%
! AATTTAGATTGAGCTAAGAA+TGG + chr8_2:63323000-63323019 Msa1261050:intron 25.0%
!!! TGAAATGATGCTGATTTTTT+TGG + chr8_2:63323054-63323073 Msa1261050:intron 25.0%
!! AATCATTGTCATCTGATTTT+CGG - chr8_2:63323118-63323137 None:intergenic 25.0%
!!! TTTCTAGTGGTCTTATAATA+TGG + chr8_2:63323332-63323351 Msa1261050:intron 25.0%
! GTTTATGCATTAGAAATGAT+AGG + chr8_2:63323435-63323454 Msa1261050:intron 25.0%
! GAAGGCAAATTTGATTAAAT+TGG + chr8_2:63323535-63323554 Msa1261050:intron 25.0%
! TATTATACATTCAGTAGCAT+TGG - chr8_2:63323642-63323661 None:intergenic 25.0%
! TAAAATGAAAACAATGCCAA+TGG - chr8_2:63323741-63323760 None:intergenic 25.0%
! AATGATCCATTTACTATTCA+AGG + chr8_2:63323776-63323795 Msa1261050:intron 25.0%
! ATGATCCATTTACTATTCAA+GGG + chr8_2:63323777-63323796 Msa1261050:intron 25.0%
! TTAAACCCTTGAATAGTAAA+TGG - chr8_2:63323785-63323804 None:intergenic 25.0%
!!! TATGTCATTTTCAGTAAGAA+GGG - chr8_2:63324098-63324117 None:intergenic 25.0%
! TTAAATCAAACTCGAAGTTA+CGG - chr8_2:63324640-63324659 None:intergenic 25.0%
ATACAAAGAAAGAGGATCAT+CGG - chr8_2:63322247-63322266 None:intergenic 30.0%
! TGTTGTTGATTGATCTGAAT+GGG - chr8_2:63322300-63322319 None:intergenic 30.0%
! TTGTTGTTGATTGATCTGAA+TGG - chr8_2:63322301-63322320 None:intergenic 30.0%
AGATGAACAATGTTCATTCA+CGG + chr8_2:63322340-63322359 Msa1261050:CDS 30.0%
!! AACCTAAAGAAAAGAGTGTT+GGG + chr8_2:63322838-63322857 Msa1261050:CDS 30.0%
!! CTCAATCAATTTTGAGAACT+CGG + chr8_2:63322880-63322899 Msa1261050:CDS 30.0%
!! TCAATCAATTTTGAGAACTC+GGG + chr8_2:63322881-63322900 Msa1261050:CDS 30.0%
!!! ATTCACACTGCATTTTTTAG+TGG - chr8_2:63323392-63323411 None:intergenic 30.0%
ATGATAGGTTTGTAGATGAT+AGG + chr8_2:63323450-63323469 Msa1261050:intron 30.0%
CCAAAATAATGGTCAATTCA+AGG - chr8_2:63323494-63323513 None:intergenic 30.0%
! CCTTGAATTGACCATTATTT+TGG + chr8_2:63323491-63323510 Msa1261050:intron 30.0%
!!! TGACCATTATTTTGGTGATT+TGG + chr8_2:63323499-63323518 Msa1261050:intron 30.0%
!! TTTGGCTCTATTTGATTAGA+AGG + chr8_2:63323517-63323536 Msa1261050:intron 30.0%
! TTTTATTGTGAACTGAATCC+AGG + chr8_2:63323559-63323578 Msa1261050:intron 30.0%
!! TTTGACCTGGTTTTTAACAT+TGG + chr8_2:63323685-63323704 Msa1261050:intron 30.0%
TATACCAAAGTTAAGTCCAT+TGG + chr8_2:63323722-63323741 Msa1261050:intron 30.0%
CTTGTTTACTTCCTCTTTAA+TGG + chr8_2:63323814-63323833 Msa1261050:intron 30.0%
GTAAAAAACTTGTCTATGGT+TGG - chr8_2:63323935-63323954 None:intergenic 30.0%
GATGGTAAAAAACTTGTCTA+TGG - chr8_2:63323939-63323958 None:intergenic 30.0%
!!! CTATGTCATTTTCAGTAAGA+AGG - chr8_2:63324099-63324118 None:intergenic 30.0%
AAATGGAATGAAAGAAACAC+TGG + chr8_2:63324186-63324205 Msa1261050:CDS 30.0%
ATGTGACAAAACAATAGCAA+TGG - chr8_2:63324347-63324366 None:intergenic 30.0%
AAATAATTCAGGATGAAGCA+GGG - chr8_2:63324510-63324529 None:intergenic 30.0%
AAAATAATTCAGGATGAAGC+AGG - chr8_2:63324511-63324530 None:intergenic 30.0%
TTTCTGATTTACTTTGACTG+TGG + chr8_2:63324534-63324553 Msa1261050:three_prime_UTR 30.0%
GATGTTGATATTCTGATGAA+AGG + chr8_2:63324556-63324575 Msa1261050:three_prime_UTR 30.0%
! CTAGCTTATGAAGTTGATTA+GGG + chr8_2:63324609-63324628 Msa1261050:three_prime_UTR 30.0%
ATTTAACCATTGAGTCATCA+TGG - chr8_2:63324683-63324702 None:intergenic 30.0%
AGAGATGTTGTTATACAGAG+CGG - chr8_2:63321773-63321792 None:intergenic 35.0%
TTCACAACACAACACAACAA+TGG + chr8_2:63321816-63321835 Msa1261050:exon 35.0%
CTTGTAGGAGTTTAAGGATT+AGG - chr8_2:63321858-63321877 None:intergenic 35.0%
TCATTGCTTGTAGGAGTTTA+AGG - chr8_2:63321864-63321883 None:intergenic 35.0%
ACGGTTATTGAGAATGAGAT+CGG - chr8_2:63322049-63322068 None:intergenic 35.0%
CTCAATAACCGTCTTCAATT+AGG + chr8_2:63322057-63322076 Msa1261050:CDS 35.0%
!! GGAATCTGATAATGGTTGAA+TGG - chr8_2:63322226-63322245 None:intergenic 35.0%
AAGATTTCTGATATGTTGGC+TGG + chr8_2:63322765-63322784 Msa1261050:CDS 35.0%
TGGGATGAACAAAATGTTGA+AGG + chr8_2:63322813-63322832 Msa1261050:CDS 35.0%
! GAACCTAAAGAAAAGAGTGT+TGG + chr8_2:63322837-63322856 Msa1261050:CDS 35.0%
!!! ATGATGCTGATTTTTTTGGC+AGG + chr8_2:63323058-63323077 Msa1261050:intron 35.0%
!! CATGAAAAGAAATGGACTGA+TGG + chr8_2:63323233-63323252 Msa1261050:CDS 35.0%
!!! GCTTGGAAAGGTATTCATTT+TGG + chr8_2:63323295-63323314 Msa1261050:intron 35.0%
GAGCCAAATCACCAAAATAA+TGG - chr8_2:63323505-63323524 None:intergenic 35.0%
CAGTTCCAATGTTAAAAACC+AGG - chr8_2:63323693-63323712 None:intergenic 35.0%
! AATGCCAATGGACTTAACTT+TGG - chr8_2:63323729-63323748 None:intergenic 35.0%
ATTCATGTCAGCCATTAAAG+AGG - chr8_2:63323828-63323847 None:intergenic 35.0%
! TATGGTTGGCAAAGGATTTT+TGG - chr8_2:63323921-63323940 None:intergenic 35.0%
TCTTAGGACATCATCATAGA+TGG - chr8_2:63323957-63323976 None:intergenic 35.0%
TTAGATGTGTTAAGAGAGTG+TGG - chr8_2:63324157-63324176 None:intergenic 35.0%
CTTAACACATCTAAGAGTCA+AGG + chr8_2:63324163-63324182 Msa1261050:CDS 35.0%
ACATCTAAGAGTCAAGGAAA+TGG + chr8_2:63324169-63324188 Msa1261050:CDS 35.0%
TACTGTCAGAAATGCAAATG+TGG + chr8_2:63324224-63324243 Msa1261050:CDS 35.0%
CACTTTAAATCCTGCTTCAA+GGG - chr8_2:63324272-63324291 None:intergenic 35.0%
ACACTTTAAATCCTGCTTCA+AGG - chr8_2:63324273-63324292 None:intergenic 35.0%
! GAAGCAGGATTTAAAGTGTT+TGG + chr8_2:63324274-63324293 Msa1261050:CDS 35.0%
! ATTTGAAGCGAGTAAATGCA+TGG + chr8_2:63324365-63324384 Msa1261050:CDS 35.0%
AATAATTCAGGATGAAGCAG+GGG - chr8_2:63324509-63324528 None:intergenic 35.0%
! GCTAGCTTATGAAGTTGATT+AGG + chr8_2:63324608-63324627 Msa1261050:three_prime_UTR 35.0%
AACAAACCATGATGACTCAA+TGG + chr8_2:63324674-63324693 Msa1261050:three_prime_UTR 35.0%
! TTAGAGCTTGTTTGTCAATG+TGG + chr8_2:63324703-63324722 Msa1261050:three_prime_UTR 35.0%
TGAATTGAGTGTGTGTGTGT+GGG - chr8_2:63321800-63321819 None:intergenic 40.0%
AATGAAAGCGATCAACGTAG+AGG - chr8_2:63322089-63322108 None:intergenic 40.0%
TTGAATGGTGAAATGACGAG+TGG - chr8_2:63322211-63322230 None:intergenic 40.0%
GGATCATCGGAATCTGATAA+TGG - chr8_2:63322234-63322253 None:intergenic 40.0%
GTGGAGAGATACAAAGAAAG+AGG - chr8_2:63322255-63322274 None:intergenic 40.0%
AAATTATCTCGTGGAGCAAG+TGG - chr8_2:63322369-63322388 None:intergenic 40.0%
CTAAACGATCACAATCTGCA+GGG + chr8_2:63322424-63322443 Msa1261050:CDS 40.0%
!! ATGGAAGCTCTTCTAGGATT+CGG - chr8_2:63322654-63322673 None:intergenic 40.0%
TAGAAGAGCTTCCATTTCTC+CGG + chr8_2:63322659-63322678 Msa1261050:CDS 40.0%
TTCTACTGCGAAGAAGAAGA+TGG + chr8_2:63322728-63322747 Msa1261050:CDS 40.0%
TTCATCCCAATTCTTCCTTG+CGG - chr8_2:63322802-63322821 None:intergenic 40.0%
! GACCCAACACTCTTTTCTTT+AGG - chr8_2:63322843-63322862 None:intergenic 40.0%
!! AGAGTGTTGGGTCTAAAACT+AGG + chr8_2:63322850-63322869 Msa1261050:CDS 40.0%
!! GAGTGTTGGGTCTAAAACTA+GGG + chr8_2:63322851-63322870 Msa1261050:CDS 40.0%
CTCTTCTCCTCAAAGTTGTT+TGG + chr8_2:63323166-63323185 Msa1261050:CDS 40.0%
TTCTCCTCAAAGTTGTTTGG+AGG + chr8_2:63323169-63323188 Msa1261050:CDS 40.0%
TCTACCTCCAAACAACTTTG+AGG - chr8_2:63323176-63323195 None:intergenic 40.0%
GTAGAGAAATCCAAGTTTGC+AGG + chr8_2:63323191-63323210 Msa1261050:CDS 40.0%
AAATCCAAGTTTGCAGGTCT+TGG + chr8_2:63323197-63323216 Msa1261050:CDS 40.0%
CAAACTTTCAAGGCTTGGAA+AGG + chr8_2:63323283-63323302 Msa1261050:CDS 40.0%
!!! CACACTGCATTTTTTAGTGG+TGG - chr8_2:63323389-63323408 None:intergenic 40.0%
TAGGTTTGTAGATGATAGGC+TGG + chr8_2:63323454-63323473 Msa1261050:intron 40.0%
GGTAACGATTTCATTTGACC+TGG + chr8_2:63323672-63323691 Msa1261050:intron 40.0%
AACTTGTCTATGGTTGGCAA+AGG - chr8_2:63323929-63323948 None:intergenic 40.0%
AGGGACTTTGATTGACATGT+TGG - chr8_2:63324028-63324047 None:intergenic 40.0%
AATCAAAGTCCCTCTCTCTT+TGG + chr8_2:63324035-63324054 Msa1261050:CDS 40.0%
ATCAAAGTCCCTCTCTCTTT+GGG + chr8_2:63324036-63324055 Msa1261050:CDS 40.0%
GGATACTATCTGAAGATCAG+TGG - chr8_2:63324077-63324096 None:intergenic 40.0%
CTCCATCAGAACTTCAGAAA+AGG + chr8_2:63324122-63324141 Msa1261050:CDS 40.0%
!!! AGCCTTTTCTGAAGTTCTGA+TGG - chr8_2:63324127-63324146 None:intergenic 40.0%
ATGAAAGAAACACTGGAGCT+TGG + chr8_2:63324193-63324212 Msa1261050:CDS 40.0%
!!! GGTTTTGTTATCCAGCATGT+AGG + chr8_2:63324460-63324479 Msa1261050:CDS 40.0%
! CAAAAGTTGATCCTACATGC+TGG - chr8_2:63324474-63324493 None:intergenic 40.0%
AATCAAACTCGAAGTTACGG+CGG - chr8_2:63324637-63324656 None:intergenic 40.0%
GTGAATTGAGTGTGTGTGTG+TGG - chr8_2:63321801-63321820 None:intergenic 45.0%
! AAGGATTAGGCCTGGTGTTA+GGG - chr8_2:63321845-63321864 None:intergenic 45.0%
TAAGGATTAGGCCTGGTGTT+AGG - chr8_2:63321846-63321865 None:intergenic 45.0%
AGGAGTTTAAGGATTAGGCC+TGG - chr8_2:63321853-63321872 None:intergenic 45.0%
! TGTCGGTGTTCATTGCTTGT+AGG - chr8_2:63321873-63321892 None:intergenic 45.0%
! TGAGTTGGAGAAGAGGAGAA+CGG - chr8_2:63321915-63321934 None:intergenic 45.0%
TCTCCTCTTCTCCAACTCAT+CGG + chr8_2:63321916-63321935 Msa1261050:CDS 45.0%
! ATTCCGATGAGTTGGAGAAG+AGG - chr8_2:63321922-63321941 None:intergenic 45.0%
GTTGAGAAAGAAGCCTTCGT+TGG - chr8_2:63321977-63321996 None:intergenic 45.0%
TGGAGTTGAGAGAATCAGAG+AGG - chr8_2:63321999-63322018 None:intergenic 45.0%
!! TGAGAATGAGATCGGTGTCA+GGG - chr8_2:63322041-63322060 None:intergenic 45.0%
! TTGAGAATGAGATCGGTGTC+AGG - chr8_2:63322042-63322061 None:intergenic 45.0%
! GGAACTGGCCTAATTGAAGA+CGG - chr8_2:63322068-63322087 None:intergenic 45.0%
!! TGTTGGTGACAGAAGGAAGA+GGG - chr8_2:63322119-63322138 None:intergenic 45.0%
!! ATGTTGGTGACAGAAGGAAG+AGG - chr8_2:63322120-63322139 None:intergenic 45.0%
ATGGTGAAATGACGAGTGGT+AGG - chr8_2:63322207-63322226 None:intergenic 45.0%
GATCTGAATGGGAGATTGTG+CGG - chr8_2:63322289-63322308 None:intergenic 45.0%
!! GGCGTTGGTAAATTATCTCG+TGG - chr8_2:63322378-63322397 None:intergenic 45.0%
GATGAAAATCTCTTGGGCGT+TGG - chr8_2:63322393-63322412 None:intergenic 45.0%
! GCCCAAGAGATTTTCATCTC+CGG + chr8_2:63322395-63322414 Msa1261050:CDS 45.0%
GCCGGAGATGAAAATCTCTT+GGG - chr8_2:63322399-63322418 None:intergenic 45.0%
GCTAAACGATCACAATCTGC+AGG + chr8_2:63322423-63322442 Msa1261050:CDS 45.0%
TCACAATCTGCAGGGAAGTT+TGG + chr8_2:63322432-63322451 Msa1261050:CDS 45.0%
TACTGAGAGAGATCCATCTC+CGG + chr8_2:63322464-63322483 Msa1261050:CDS 45.0%
TCTCGAGCAGAAACCAAACT+CGG - chr8_2:63322540-63322559 None:intergenic 45.0%
TTTCTGCTCGAGAGGACAAT+CGG + chr8_2:63322547-63322566 Msa1261050:CDS 45.0%
AGGACAATCGGAAGGTTTCA+CGG + chr8_2:63322559-63322578 Msa1261050:CDS 45.0%
CCTCGACGGAACAATAATTG+CGG - chr8_2:63322589-63322608 None:intergenic 45.0%
GGAGAAATGGAAGCTCTTCT+AGG - chr8_2:63322660-63322679 None:intergenic 45.0%
AGAAGAGCTTCCATTTCTCC+GGG + chr8_2:63322660-63322679 Msa1261050:CDS 45.0%
CGAAGAAGAAGATGGTAGCT+GGG + chr8_2:63322736-63322755 Msa1261050:CDS 45.0%
GAAGACCGCAAGGAAGAATT+GGG + chr8_2:63322794-63322813 Msa1261050:CDS 45.0%
TTTGGCAGGTTGCAATGACA+AGG + chr8_2:63323072-63323091 Msa1261050:intron 45.0%
CTGTGTCTGGCAAACTTTCA+AGG + chr8_2:63323273-63323292 Msa1261050:CDS 45.0%
TCTGGCAAACTTTCAAGGCT+TGG + chr8_2:63323278-63323297 Msa1261050:CDS 45.0%
TTTGTAGATGATAGGCTGGC+TGG + chr8_2:63323458-63323477 Msa1261050:intron 45.0%
GAACTGAATCCAGGATGCAA+TGG + chr8_2:63323568-63323587 Msa1261050:intron 45.0%
GAATCCAGGATGCAATGGAA+AGG + chr8_2:63323573-63323592 Msa1261050:intron 45.0%
CTTTCCTTTCCATTGCATCC+TGG - chr8_2:63323580-63323599 None:intergenic 45.0%
GTCTGAAAACATGCTGAAGC+AGG - chr8_2:63323879-63323898 None:intergenic 45.0%
! TGGCTTTACACACAGAGCAA+AGG - chr8_2:63323901-63323920 None:intergenic 45.0%
TGTCCTAAGATCAATCGCAC+TGG + chr8_2:63323967-63323986 Msa1261050:CDS 45.0%
AGCTTCAACCCAAAGAGAGA+GGG - chr8_2:63324047-63324066 None:intergenic 45.0%
!! TCTTTGGGTTGAAGCTGCTT+TGG + chr8_2:63324051-63324070 Msa1261050:CDS 45.0%
GTTGAAGAATCCCTTGAAGC+AGG + chr8_2:63324259-63324278 Msa1261050:CDS 45.0%
!! AAGAAAGCATTGCCTCTGGA+TGG + chr8_2:63324316-63324335 Msa1261050:CDS 45.0%
GAAGCGAGTAAATGCATGGT+TGG + chr8_2:63324369-63324388 Msa1261050:CDS 45.0%
! GATTCCCTTTAGAAACCACG+CGG - chr8_2:63324396-63324415 None:intergenic 45.0%
!!! CTAATTTTTTTTTTTATATA+GGG + chr8_2:63322927-63322946 Msa1261050:intron 5.0%
ACAATGGCTTCCCTAACACC+AGG + chr8_2:63321832-63321851 Msa1261050:exon 50.0%
CGGGTACAATTCCGATGAGT+TGG - chr8_2:63321930-63321949 None:intergenic 50.0%
AGATCGGAGCTGGATAAAGC+GGG - chr8_2:63321949-63321968 None:intergenic 50.0%
GAGATCGGAGCTGGATAAAG+CGG - chr8_2:63321950-63321969 None:intergenic 50.0%
TCCGATCTCTTCTCCAACGA+AGG + chr8_2:63321961-63321980 Msa1261050:CDS 50.0%
GCCTTCGTTGGAGAAGAGAT+CGG - chr8_2:63321965-63321984 None:intergenic 50.0%
GTGAGAGAGAAGAACGTAGG+TGG - chr8_2:63322019-63322038 None:intergenic 50.0%
AGGGTGAGAGAGAAGAACGT+AGG - chr8_2:63322022-63322041 None:intergenic 50.0%
AGCGATCAACGTAGAGGAAC+TGG - chr8_2:63322083-63322102 None:intergenic 50.0%
!! GTTGGTGACAGAAGGAAGAG+GGG - chr8_2:63322118-63322137 None:intergenic 50.0%
!! GGACGAATGTTGGTGACAGA+AGG - chr8_2:63322126-63322145 None:intergenic 50.0%
AGATTGTGCGGTGGTTGTGT+TGG - chr8_2:63322277-63322296 None:intergenic 50.0%
CGCCGGAGATGAAAATCTCT+TGG - chr8_2:63322400-63322419 None:intergenic 50.0%
TGTGATCGTTTAGCAGTCGC+CGG - chr8_2:63322417-63322436 None:intergenic 50.0%
CAAACTCGGAACCACGCATT+TGG - chr8_2:63322526-63322545 None:intergenic 50.0%
CAAATGCGTGGTTCCGAGTT+TGG + chr8_2:63322524-63322543 Msa1261050:CDS 50.0%
! GAGTTTGGTTTCTGCTCGAG+AGG + chr8_2:63322539-63322558 Msa1261050:CDS 50.0%
GGACAATCGGAAGGTTTCAC+GGG + chr8_2:63322560-63322579 Msa1261050:CDS 50.0%
CCGCAATTATTGTTCCGTCG+AGG + chr8_2:63322586-63322605 Msa1261050:CDS 50.0%
GAAGAGCTTCCATTTCTCCG+GGG + chr8_2:63322661-63322680 Msa1261050:CDS 50.0%
CAATCTTCTCCCCGGAGAAA+TGG - chr8_2:63322673-63322692 None:intergenic 50.0%
CGGCGAAAACTTGATTCCAC+CGG - chr8_2:63322697-63322716 None:intergenic 50.0%
! CGGTGGAATCAAGTTTTCGC+CGG + chr8_2:63322695-63322714 Msa1261050:CDS 50.0%
!! ATCAAGTTTTCGCCGGCTGT+TGG + chr8_2:63322702-63322721 Msa1261050:CDS 50.0%
GCAGTAGAATCTCCAACAGC+CGG - chr8_2:63322717-63322736 None:intergenic 50.0%
GCGAAGAAGAAGATGGTAGC+TGG + chr8_2:63322735-63322754 Msa1261050:CDS 50.0%
CGAAGACCGCAAGGAAGAAT+TGG + chr8_2:63322793-63322812 Msa1261050:CDS 50.0%
TCCAAGTTTGCAGGTCTTGG+TGG + chr8_2:63323200-63323219 Msa1261050:CDS 50.0%
GTTCCTCTTGATGCTGTGTC+TGG + chr8_2:63323260-63323279 Msa1261050:CDS 50.0%
TTGCCAGACACAGCATCAAG+AGG - chr8_2:63323266-63323285 None:intergenic 50.0%
TGCTGCTGCAGCATTAGAAG+AGG + chr8_2:63323616-63323635 Msa1261050:CDS 50.0%
CAGCCAGTGCGATTGATCTT+AGG - chr8_2:63323973-63323992 None:intergenic 50.0%
CAGCTTCAACCCAAAGAGAG+AGG - chr8_2:63324048-63324067 None:intergenic 50.0%
!! GTGTTTGGAGAGAGTGCTAG+TGG + chr8_2:63324289-63324308 Msa1261050:CDS 50.0%
!! TTTGGAGAGAGTGCTAGTGG+TGG + chr8_2:63324292-63324311 Msa1261050:CDS 50.0%
!! TTGGAGAGAGTGCTAGTGGT+GGG + chr8_2:63324293-63324312 Msa1261050:CDS 50.0%
!! TGGGAAGAAAGCATTGCCTC+TGG + chr8_2:63324312-63324331 Msa1261050:CDS 50.0%
!! AAAGCATTGCCTCTGGATGG+TGG + chr8_2:63324319-63324338 Msa1261050:CDS 50.0%
TTGGACCGCGTGGTTTCTAA+AGG + chr8_2:63324388-63324407 Msa1261050:CDS 50.0%
TGGACCGCGTGGTTTCTAAA+GGG + chr8_2:63324389-63324408 Msa1261050:CDS 50.0%
AACACCGACACACGTGTCAC+CGG + chr8_2:63321883-63321902 Msa1261050:CDS 55.0%
GTTGGAGAAGAGGAGAACGG+TGG - chr8_2:63321912-63321931 None:intergenic 55.0%
GTTGGAGAAGAGATCGGAGC+TGG - chr8_2:63321959-63321978 None:intergenic 55.0%
TGACAGAAGGAAGAGGGGTG+TGG - chr8_2:63322113-63322132 None:intergenic 55.0%
ATGCGAGCTACGAGTGGTTC+CGG - chr8_2:63322180-63322199 None:intergenic 55.0%
GGTGAAATGCGAGCTACGAG+TGG - chr8_2:63322186-63322205 None:intergenic 55.0%
TTGTGCGGTGGTTGTGTTGG+TGG - chr8_2:63322274-63322293 None:intergenic 55.0%
CTGAATGGGAGATTGTGCGG+TGG - chr8_2:63322286-63322305 None:intergenic 55.0%
TGAGAGAGATCCATCTCCGG+CGG + chr8_2:63322467-63322486 Msa1261050:CDS 55.0%
GATCTCTTCATCTTCCCCGC+CGG - chr8_2:63322486-63322505 None:intergenic 55.0%
ACCAGTACCGTCCAAATGCG+TGG + chr8_2:63322512-63322531 Msa1261050:CDS 55.0%
ACCACGCATTTGGACGGTAC+TGG - chr8_2:63322516-63322535 None:intergenic 55.0%
CTCGGAACCACGCATTTGGA+CGG - chr8_2:63322522-63322541 None:intergenic 55.0%
TGCTCGAGAGGACAATCGGA+AGG + chr8_2:63322551-63322570 Msa1261050:CDS 55.0%
GACGGCTGTCTATACCTCGA+CGG - chr8_2:63322603-63322622 None:intergenic 55.0%
!! GCTCTTCTAGGATTCGGCGA+AGG - chr8_2:63322648-63322667 None:intergenic 55.0%
TCTCCGGGGAGAAGATTGTC+CGG + chr8_2:63322675-63322694 Msa1261050:CDS 55.0%
GCCACCAAGACCTGCAAACT+TGG - chr8_2:63323204-63323223 None:intergenic 55.0%
AAATGCATGGTTGGACCGCG+TGG + chr8_2:63324378-63324397 Msa1261050:CDS 55.0%
AAGAGGAGAACGGTGGTCGC+CGG - chr8_2:63321905-63321924 None:intergenic 60.0%
CGTGGGGAGAGGACGAATGT+TGG - chr8_2:63322136-63322155 None:intergenic 60.0%
GAGAGAGATCCATCTCCGGC+GGG + chr8_2:63322468-63322487 Msa1261050:CDS 60.0%
AGAGAGATCCATCTCCGGCG+GGG + chr8_2:63322469-63322488 Msa1261050:CDS 60.0%
TTCATCTTCCCCGCCGGAGA+TGG - chr8_2:63322480-63322499 None:intergenic 60.0%
TAGACAGCCGTCTCCGACGA+CGG + chr8_2:63322611-63322630 Msa1261050:CDS 60.0%
TTCCTTGCCGTCGTCGGAGA+CGG - chr8_2:63322621-63322640 None:intergenic 60.0%
CCACCGGACAATCTTCTCCC+CGG - chr8_2:63322681-63322700 None:intergenic 60.0%
CTGGATCTGCGAAGACCGCA+AGG + chr8_2:63322784-63322803 Msa1261050:CDS 60.0%
GCAATGGAGCCACCATCCAG+AGG - chr8_2:63324331-63324350 None:intergenic 60.0%
GTCGCCGGTGACACGTGTGT+CGG - chr8_2:63321890-63321909 None:intergenic 65.0%
GTTCCGGCGTTCCGACGAAG+GGG - chr8_2:63322164-63322183 None:intergenic 65.0%
GGTTCCGGCGTTCCGACGAA+GGG - chr8_2:63322165-63322184 None:intergenic 65.0%
TGGTTCCGGCGTTCCGACGA+AGG - chr8_2:63322166-63322185 None:intergenic 65.0%
GGCTGCTTCCTTGCCGTCGT+CGG - chr8_2:63322627-63322646 None:intergenic 65.0%
CCGGGGAGAAGATTGTCCGG+TGG + chr8_2:63322678-63322697 Msa1261050:CDS 65.0%
CCACCCCTTCGTCGGAACGC+CGG + chr8_2:63322158-63322177 Msa1261050:CDS 70.0%
AGCCGTCTCCGACGACGGCA+AGG + chr8_2:63322616-63322635 Msa1261050:CDS 70.0%
AAGGGGTGGCGCGTGGGGAG+AGG - chr8_2:63322147-63322166 None:intergenic 75.0%
CGACGAAGGGGTGGCGCGTG+GGG - chr8_2:63322152-63322171 None:intergenic 75.0%
CCGACGAAGGGGTGGCGCGT+GGG - chr8_2:63322153-63322172 None:intergenic 75.0%
CCCACGCGCCACCCCTTCGT+CGG + chr8_2:63322150-63322169 Msa1261050:CDS 75.0%
TCCGACGAAGGGGTGGCGCG+TGG - chr8_2:63322154-63322173 None:intergenic 75.0%
CCGGCGTTCCGACGAAGGGG+TGG - chr8_2:63322161-63322180 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 63321753 63324745 63321753 ID=Msa1261050;Name=Msa1261050
chr8_2 mRNA 63321753 63324745 63321753 ID=Msa1261050-mRNA-1;Parent=Msa1261050;Name=Msa1261050-mRNA-1;_AED=0.04;_eAED=0.04;_QI=82|1|1|1|1|1|4|223|673
chr8_2 exon 63321753 63322902 63321753 ID=Msa1261050-mRNA-1:exon:20234;Parent=Msa1261050-mRNA-1
chr8_2 exon 63323080 63323304 63323080 ID=Msa1261050-mRNA-1:exon:20235;Parent=Msa1261050-mRNA-1
chr8_2 exon 63323581 63323672 63323581 ID=Msa1261050-mRNA-1:exon:20236;Parent=Msa1261050-mRNA-1
chr8_2 exon 63323886 63324745 63323886 ID=Msa1261050-mRNA-1:exon:20237;Parent=Msa1261050-mRNA-1
chr8_2 five_prime_UTR 63321753 63321834 63321753 ID=Msa1261050-mRNA-1:five_prime_utr;Parent=Msa1261050-mRNA-1
chr8_2 CDS 63321835 63322902 63321835 ID=Msa1261050-mRNA-1:cds;Parent=Msa1261050-mRNA-1
chr8_2 CDS 63323080 63323304 63323080 ID=Msa1261050-mRNA-1:cds;Parent=Msa1261050-mRNA-1
chr8_2 CDS 63323581 63323672 63323581 ID=Msa1261050-mRNA-1:cds;Parent=Msa1261050-mRNA-1
chr8_2 CDS 63323886 63324522 63323886 ID=Msa1261050-mRNA-1:cds;Parent=Msa1261050-mRNA-1
chr8_2 three_prime_UTR 63324523 63324745 63324523 ID=Msa1261050-mRNA-1:three_prime_utr;Parent=Msa1261050-mRNA-1
Gene Sequence

>Msa1261050

ATGGCTTCCCTAACACCAGGCCTAATCCTTAAACTCCTACAAGCAATGAACACCGACACACGTGTCACCGGCGACCACCGTTCTCCTCTTCTCCAACTCATCGGAATTGTACCCGCTTTATCCAGCTCCGATCTCTTCTCCAACGAAGGCTTCTTTCTCAACCTCTCTGATTCTCTCAACTCCACCTACGTTCTTCTCTCTCACCCTGACACCGATCTCATTCTCAATAACCGTCTTCAATTAGGCCAGTTCCTCTACGTTGATCGCTTTCATTTCCACACCCCTCTTCCTTCTGTCACCAACATTCGTCCTCTCCCCACGCGCCACCCCTTCGTCGGAACGCCGGAACCACTCGTAGCTCGCATTTCACCTACCACTCGTCATTTCACCATTCAACCATTATCAGATTCCGATGATCCTCTTTCTTTGTATCTCTCCACCAACACAACCACCGCACAATCTCCCATTCAGATCAATCAACAACAACAACAACAGCAGCAGAAGAAGATGAACAATGTTCATTCACGGCAACCACTTGCTCCACGAGATAATTTACCAACGCCCAAGAGATTTTCATCTCCGGCGACTGCTAAACGATCACAATCTGCAGGGAAGTTTGGTAAAGTTTCTACTGAGAGAGATCCATCTCCGGCGGGGAAGATGAAGAGATCTTCTTCACCAGTACCGTCCAAATGCGTGGTTCCGAGTTTGGTTTCTGCTCGAGAGGACAATCGGAAGGTTTCACGGGAAGCCGCAATTATTGTTCCGTCGAGGTATAGACAGCCGTCTCCGACGACGGCAAGGAAGCAGCCTTCGCCGAATCCTAGAAGAGCTTCCATTTCTCCGGGGAGAAGATTGTCCGGTGGAATCAAGTTTTCGCCGGCTGTTGGAGATTCTACTGCGAAGAAGAAGATGGTAGCTGGGATTTCTAAGATTTCTGATATGTTGGCTGGATCTGCGAAGACCGCAAGGAAGAATTGGGATGAACAAAATGTTGAAGGTGAACCTAAAGAAAAGAGTGTTGGGTCTAAAACTAGGGTTGATTCTCAATCAATTTTGAGAACTCGGGTTGCAATGACAAGGAGATTGAGTGATGTGAAAAGCCGAAAATCAGATGACAATGATTCTTCTTCTGTAGATGAGAATACTATAGACTCTTCTCCTCAAAGTTGTTTGGAGGTAGAGAAATCCAAGTTTGCAGGTCTTGGTGGCATTACAATTCATGAAAAGAAATGGACTGATGGAAGTGTTCCTCTTGATGCTGTGTCTGGCAAACTTTCAAGGCTTGGAAAGGATGCAATGGAAAGGAAAGCTCTTGCTTCTGCAGCTGCTGCTGCAGCATTAGAAGAGGCCAATGCTACTGAATGTATAATAAGAAATTTAAGCATGTTTTCAGACCTTTGCTCTGTGTGTAAAGCCAAAAATCCTTTGCCAACCATAGACAAGTTTTTTACCATCTATGATGATGTCCTAAGATCAATCGCACTGGCTGAATCTGTTGCTAATAGTCACGATGACAGTATTCCAACATGTCAATCAAAGTCCCTCTCTCTTTGGGTTGAAGCTGCTTTGGCCACTGATCTTCAGATAGTATCCCTTCTTACTGAAAATGACATAGATACTCCATCAGAACTTCAGAAAAGGCTGTCAAGACCACACTCTCTTAACACATCTAAGAGTCAAGGAAATGGAATGAAAGAAACACTGGAGCTTGGAACAAGTTTACTGTCAGAAATGCAAATGTGGTTTCTACGCTTTGTTGAAGAATCCCTTGAAGCAGGATTTAAAGTGTTTGGAGAGAGTGCTAGTGGTGGGAAGAAAGCATTGCCTCTGGATGGTGGCTCCATTGCTATTGTTTTGTCACATTTGAAGCGAGTAAATGCATGGTTGGACCGCGTGGTTTCTAAAGGGAATCACTCATTGACAGATAAGATTGAGAAATTAAAGAGAAAAATCTATGGTTTTGTTATCCAGCATGTAGGATCAACTTTTGATAACAAAGCTTCCCCTGCTTCATCCTGA

Protein sequence

>Msa1261050

MASLTPGLILKLLQAMNTDTRVTGDHRSPLLQLIGIVPALSSSDLFSNEGFFLNLSDSLNSTYVLLSHPDTDLILNNRLQLGQFLYVDRFHFHTPLPSVTNIRPLPTRHPFVGTPEPLVARISPTTRHFTIQPLSDSDDPLSLYLSTNTTTAQSPIQINQQQQQQQQKKMNNVHSRQPLAPRDNLPTPKRFSSPATAKRSQSAGKFGKVSTERDPSPAGKMKRSSSPVPSKCVVPSLVSAREDNRKVSREAAIIVPSRYRQPSPTTARKQPSPNPRRASISPGRRLSGGIKFSPAVGDSTAKKKMVAGISKISDMLAGSAKTARKNWDEQNVEGEPKEKSVGSKTRVDSQSILRTRVAMTRRLSDVKSRKSDDNDSSSVDENTIDSSPQSCLEVEKSKFAGLGGITIHEKKWTDGSVPLDAVSGKLSRLGKDAMERKALASAAAAAALEEANATECIIRNLSMFSDLCSVCKAKNPLPTIDKFFTIYDDVLRSIALAESVANSHDDSIPTCQSKSLSLWVEAALATDLQIVSLLTENDIDTPSELQKRLSRPHSLNTSKSQGNGMKETLELGTSLLSEMQMWFLRFVEESLEAGFKVFGESASGGKKALPLDGGSIAIVLSHLKRVNAWLDRVVSKGNHSLTDKIEKLKRKIYGFVIQHVGSTFDNKASPASS*