AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0590200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0590200 MtrunA17_Chr4g0007641 91.882 850 62 2 1 850 1 843 0.0 1565
Msa0590200 MtrunA17_Chr6g0484831 80.141 851 152 6 1 850 1 835 0.0 1373
Msa0590200 MtrunA17_Chr7g0215341 78.848 851 155 6 1 850 1 827 0.0 1339
Msa0590200 MtrunA17_Chr5g0406641 79.412 850 159 6 1 849 1 835 0.0 1332
Msa0590200 MtrunA17_Chr6g0464681 66.251 883 208 11 1 850 1 826 0.0 1119
Msa0590200 MtrunA17_Chr6g0486931 55.045 783 328 8 67 834 144 917 0.0 867
Msa0590200 MtrunA17_Chr8g0369361 49.872 782 359 8 69 833 9 774 0.0 776
Msa0590200 MtrunA17_Chr5g0427891 57.143 343 146 1 492 834 1 342 1.63e-135 407
Msa0590200 MtrunA17_Chr2g0302601 34.383 381 206 8 452 822 1215 1561 9.99e-59 218
Msa0590200 MtrunA17_Chr4g0017221 34.726 383 200 9 452 821 1190 1535 2.90e-57 214
Msa0590200 MtrunA17_Chr6g0477371 34.211 380 206 8 452 821 1206 1551 3.39e-57 214
Msa0590200 MtrunA17_Chr8g0364091 44.505 182 85 6 137 308 37 212 9.30e-37 139
Msa0590200 MtrunA17_Chr8g0364111 74.242 66 17 0 768 833 3 68 2.70e-27 106
Msa0590200 MtrunA17_Chr5g0427881 60.938 64 25 0 404 467 40 103 5.06e-22 91.7
Msa0590200 MtrunA17_Chr3g0087051 35.503 169 85 4 661 821 2 154 6.34e-22 93.2
Msa0590200 MtrunA17_Chr5g0427871 43.925 107 51 2 66 163 35 141 6.54e-21 89.7
Msa0590200 MtrunA17_Chr2g0306841 35.556 90 58 0 567 656 15 104 3.08e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0590200 AT1G69770.1 51.834 818 350 13 47 830 17 824 0.0 813
Msa0590200 AT4G19020.1 49.937 799 365 10 51 833 502 1281 0.0 791
Msa0590200 AT1G80740.1 50.737 814 342 13 50 837 5 785 0.0 791
Msa0590200 AT4G19020.2 49.937 799 365 10 51 833 454 1233 0.0 791
Msa0590200 AT4G14140.3 36.096 374 207 8 452 821 1168 1513 9.80e-59 219
Msa0590200 AT4G14140.1 36.096 374 207 8 452 821 1168 1513 9.80e-59 219
Msa0590200 AT4G14140.2 36.096 374 207 8 452 821 1194 1539 2.17e-58 218
Msa0590200 AT4G08990.1 35.401 387 216 9 441 821 1148 1506 1.68e-56 212
Msa0590200 AT5G49160.2 35.925 373 203 11 452 818 1095 1437 3.36e-55 208
Msa0590200 AT5G49160.1 35.389 373 205 10 452 818 1183 1525 3.64e-55 208
Msa0590200 AT4G13610.1 34.615 390 203 10 441 821 1057 1403 9.04e-54 203

Find 198 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTTATTAGATTTGTATTC+TGG 0.139185 4_2:-13599431 Msa0590200:CDS
GAAATTCGCTGGTGGGTATC+TGG 0.159704 4_2:-13598022 Msa0590200:CDS
TCATCGTTATTTAACTTATA+TGG 0.198097 4_2:+13596931 None:intergenic
CCAAAACATACATGAGTTTC+AGG 0.222977 4_2:+13599193 None:intergenic
AGCAGTCTCGCTTTCTATTC+TGG 0.233443 4_2:+13599571 None:intergenic
TTCTCCATCAATATATATTT+AGG 0.241682 4_2:+13598060 None:intergenic
TCTTGGCTTGAAAATGAAAA+TGG 0.247732 4_2:+13595420 None:intergenic
AGATATGGAACCTTCTTCTT+TGG 0.258574 4_2:+13596886 None:intergenic
ATGTCCACTGGCCTTTGTTT+TGG 0.262234 4_2:-13599398 Msa0590200:CDS
TCTACAATTTCAAGTGAATC+TGG 0.270615 4_2:-13599530 Msa0590200:CDS
AAGACAACTTGGATACTTAA+AGG 0.290097 4_2:+13595533 None:intergenic
ACAAATTTCATCGCATAATC+CGG 0.322892 4_2:+13596601 None:intergenic
CCAGATTGCTATAAACTTTG+TGG 0.326211 4_2:-13596038 Msa0590200:CDS
ATAACCTGGTTGTGAGGTTC+TGG 0.329152 4_2:+13596417 None:intergenic
TATTAACAAGCACACCCTTT+AGG 0.331476 4_2:+13596769 None:intergenic
CAACCAGCTCACAGTGTAAC+TGG 0.332573 4_2:+13601384 None:intergenic
ATCTGACTCTGAGGTATTTG+AGG 0.339615 4_2:-13598917 Msa0590200:CDS
CTAAAATTAAAGAATCTGAT+AGG 0.352290 4_2:-13599460 Msa0590200:CDS
GCTTGCCCCAGCGTTGTACC+TGG 0.360590 4_2:-13597545 Msa0590200:CDS
CTTTATTAGATTTGTATTCT+GGG 0.360910 4_2:-13599430 Msa0590200:CDS
GAAAGAGTGTATCTGAAATC+TGG 0.362870 4_2:-13596717 Msa0590200:CDS
TTCAATCTTTACCGTATCTT+CGG 0.365889 4_2:+13600082 None:intergenic
TGGCTCCCATGTATCATAAC+TGG 0.370498 4_2:+13598533 None:intergenic
GAAGCCTAAATATATATTGA+TGG 0.373783 4_2:-13598064 Msa0590200:CDS
AGTTACACTGTGAGCTGGTT+GGG 0.378676 4_2:-13601382 Msa0590200:five_prime_UTR
GGTCAAGCTGATTTCATTTG+TGG 0.380278 4_2:-13598201 Msa0590200:CDS
TTAGTGGTTTCAATCGCTTT+AGG 0.380660 4_2:-13598158 Msa0590200:CDS
TGTGCGCTTTGTAGTGGTTC+CGG 0.388720 4_2:-13600834 Msa0590200:intron
AAATTCGCTGGTGGGTATCT+GGG 0.401492 4_2:-13598021 Msa0590200:CDS
GTAAGAACTCTGTCTTGCTT+TGG 0.411012 4_2:+13596092 None:intergenic
TTCCAGAGTTTGAATACTCT+TGG 0.413434 4_2:+13595403 None:intergenic
AGACAACTTGGATACTTAAA+GGG 0.415659 4_2:+13595534 None:intergenic
CACATTAAATATTCACACTT+TGG 0.416932 4_2:-13595349 Msa0590200:three_prime_UTR
CGTACGGCCTTCCTCAGTTT+CGG 0.417102 4_2:-13597930 Msa0590200:CDS
GATAATAATGTGGCTGAAGA+AGG 0.423291 4_2:-13599488 Msa0590200:CDS
GGCGTAACGGTGAGGCCAAC+GGG 0.424194 4_2:+13600939 None:intergenic
TGTCATAATGCAGGAAATTA+CGG 0.427063 4_2:-13597596 Msa0590200:intron
GCTGAATACAACAGGCCATT+TGG 0.427862 4_2:-13596483 Msa0590200:intron
CATGCATTATCAAGCTAGAA+TGG 0.430331 4_2:-13597971 Msa0590200:CDS
GAAAGCTGCGCAACGATCTT+CGG 0.430396 4_2:-13601022 Msa0590200:CDS
CCACAAAGTTTATAGCAATC+TGG 0.432209 4_2:+13596038 None:intergenic
TCGAGAGAATGCAAGGCTAC+AGG 0.432318 4_2:-13596066 Msa0590200:CDS
CCCCATCAACATTCACTTCA+CGG 0.438946 4_2:+13600778 None:intergenic
TTTGCTTCATCGGCCGGAAA+AGG 0.441551 4_2:+13600964 None:intergenic
TTAGATTTGTATTCTGGGTG+TGG 0.441710 4_2:-13599425 Msa0590200:CDS
TGTGAGAAGTTTGTTCTGAA+TGG 0.441943 4_2:-13599018 Msa0590200:CDS
TTAGCTATAGTTGATGATGA+TGG 0.445533 4_2:-13595501 Msa0590200:CDS
GTGATGATGAAAAGAGTTAT+GGG 0.446587 4_2:-13597382 Msa0590200:CDS
TCTGAAATCTGGGAAGCCTT+TGG 0.448836 4_2:-13596706 Msa0590200:intron
GTTCCTGTGGGCCTTGCCCT+CGG 0.450192 4_2:-13595615 Msa0590200:CDS
CAAGCTGATTTCATTTGTGG+TGG 0.453980 4_2:-13598198 Msa0590200:CDS
ATGAAAGAATTTGTCACTAA+AGG 0.456848 4_2:-13598368 Msa0590200:CDS
TTGCCTCATTCCAAAGAAGA+AGG 0.460877 4_2:-13596896 Msa0590200:intron
GTATACCTCAAGCCCTCAAT+TGG 0.466800 4_2:+13598513 None:intergenic
AGTGATGATGAAAAGAGTTA+TGG 0.467519 4_2:-13597383 Msa0590200:CDS
GAACCTTCTTCTTTGGAATG+AGG 0.469060 4_2:+13596893 None:intergenic
TGGCGTAACGGTGAGGCCAA+CGG 0.470112 4_2:+13600938 None:intergenic
ATTTAACAGCAATTGTAAAG+AGG 0.474358 4_2:-13598393 Msa0590200:intron
ACAGGCCATTTGGTCGACTT+TGG 0.475021 4_2:-13596473 Msa0590200:intron
GAACTCTGTCTTGCTTTGGA+TGG 0.480776 4_2:+13596096 None:intergenic
AATCGTCGAAGAAGAAGAAC+TGG 0.481531 4_2:-13601079 Msa0590200:CDS
CCTTGCCCTCGGATACACAC+TGG 0.484530 4_2:-13595604 Msa0590200:CDS
CAGTTACACTGTGAGCTGGT+TGG 0.487255 4_2:-13601383 Msa0590200:five_prime_UTR
CTACAATTTCAAGTGAATCT+GGG 0.489954 4_2:-13599529 Msa0590200:CDS
GGCAAACTTCAGGGACCTAA+AGG 0.491099 4_2:-13596784 Msa0590200:CDS
CTTGCCCTCGGATACACACT+GGG 0.492440 4_2:-13595603 Msa0590200:CDS
AGCCAAGAGTATTCAAACTC+TGG 0.494156 4_2:-13595405 Msa0590200:three_prime_UTR
TGATACATGGGAGCCAATTG+AGG 0.494303 4_2:-13598526 Msa0590200:CDS
TACCGTGAAGTGAATGTTGA+TGG 0.495325 4_2:-13600780 Msa0590200:CDS
AGAATGGGAATGATGGCTGC+AGG 0.497284 4_2:-13597955 Msa0590200:CDS
AAACTCTGGAATTGTATGAA+TGG 0.497426 4_2:-13595391 Msa0590200:three_prime_UTR
TATCCGAGGGCAAGGCCCAC+AGG 0.498141 4_2:+13595612 None:intergenic
AGACTATATTGCTGCAATTG+TGG 0.501513 4_2:-13600162 Msa0590200:CDS
ATTTGTCACTAAAGGATATG+AGG 0.501542 4_2:-13598360 Msa0590200:CDS
GCCATTTGGTCGACTTTGGT+GGG 0.501789 4_2:-13596469 Msa0590200:CDS
AAAGAGTGTATCTGAAATCT+GGG 0.501903 4_2:-13596716 Msa0590200:CDS
CCTGGTTGTGAGGTTCTGGC+CGG 0.503821 4_2:+13596421 None:intergenic
CACATTATTATCACTTGCAC+AGG 0.504256 4_2:+13599499 None:intergenic
CGTCACCCAGGTACAACGCT+GGG 0.505362 4_2:+13597539 None:intergenic
TAATAAGAATAAAGTGGAGT+TGG 0.507206 4_2:-13596751 Msa0590200:CDS
GGGTGTGGAGCTATGTCCAC+TGG 0.507514 4_2:-13599410 Msa0590200:CDS
ATGATGGCTGCAGGGTCGTA+CGG 0.507692 4_2:-13597946 Msa0590200:CDS
GACTTTGAAGAGGTGGGCTG+TGG 0.510373 4_2:-13599257 Msa0590200:intron
TATCTCTGAAAATCAGTATG+AGG 0.512002 4_2:+13597353 None:intergenic
ACACTGGGTTTAGCAATTCA+AGG 0.513390 4_2:-13595588 Msa0590200:CDS
GATACATGGGAGCCAATTGA+GGG 0.513471 4_2:-13598525 Msa0590200:CDS
ATGACTCCAGTTATGATACA+TGG 0.517212 4_2:-13598539 Msa0590200:CDS
GGCCATTTGGTCGACTTTGG+TGG 0.517220 4_2:-13596470 Msa0590200:CDS
ATCTTTCAGGTGCAGTGGAA+GGG 0.518544 4_2:-13598564 Msa0590200:intron
GCTTGTTAATAAGAATAAAG+TGG 0.518752 4_2:-13596757 Msa0590200:CDS
TTGGGGAGCTCTTCCTACCC+AGG 0.520780 4_2:-13597893 Msa0590200:intron
AAAGGACGGGCAAGACAACT+TGG 0.522582 4_2:+13595522 None:intergenic
TTAGCAATTCAAGGACGCTC+TGG 0.523304 4_2:-13595579 Msa0590200:CDS
GTCTCGCTTTCTATTCTGGA+AGG 0.523813 4_2:+13599575 None:intergenic
TAATGCAGGTACATACAAGT+TGG 0.525057 4_2:-13595651 Msa0590200:intron
AATCTTTCAGGTGCAGTGGA+AGG 0.527731 4_2:-13598565 Msa0590200:intron
TGCAGGTTATCAAGAACCAT+GGG 0.527796 4_2:-13599988 Msa0590200:intron
TCCCACCAAAGTCGACCAAA+TGG 0.528934 4_2:+13596468 None:intergenic
CGAGAGAATGCAAGGCTACA+GGG 0.529397 4_2:-13596065 Msa0590200:CDS
TATATCAGATTAAAGAGAAG+TGG 0.529928 4_2:-13597332 Msa0590200:intron
ATGCATTATCAAGCTAGAAT+GGG 0.531010 4_2:-13597970 Msa0590200:CDS
TTAAAGAATCTGATAGGGAG+TGG 0.532218 4_2:-13599454 Msa0590200:CDS
TCAAGCTAGAATGGGAATGA+TGG 0.534324 4_2:-13597962 Msa0590200:CDS
TAAAATTAAAGAATCTGATA+GGG 0.534696 4_2:-13599459 Msa0590200:CDS
TTTCCAGTTACACTGTGAGC+TGG 0.535330 4_2:-13601387 Msa0590200:five_prime_UTR
AATGCGGTTGCTGTTCCTGT+GGG 0.537648 4_2:-13595627 Msa0590200:CDS
CTCACGCGTTCTTGGCGTAA+CGG 0.538323 4_2:+13600926 None:intergenic
ATTATCACTTGCACAGGCGT+TGG 0.541418 4_2:+13599505 None:intergenic
CTCGATTCAACCTCATGAGT+TGG 0.541627 4_2:+13597735 None:intergenic
CTTCACTTTATCATCGTCTC+CGG 0.543207 4_2:+13600815 None:intergenic
GGGATCTCGTTGATGAAAAG+AGG 0.547769 4_2:-13599967 Msa0590200:CDS
AGATACACTCTTTCAACAGA+GGG 0.551050 4_2:+13596726 None:intergenic
AATGTTGTTCAGGGAGAAGA+GGG 0.552118 4_2:-13600191 Msa0590200:intron
GGAAAAGACATGAATTAATG+AGG 0.552426 4_2:+13595462 None:intergenic
TTCTGTCGAGAAGGAAGTGA+CGG 0.552521 4_2:+13601045 None:intergenic
CATTCTAGCTTGATAATGCA+TGG 0.554948 4_2:+13597972 None:intergenic
GAATGTTGTTCAGGGAGAAG+AGG 0.555164 4_2:-13600192 Msa0590200:intron
CTTGCCCCAGCGTTGTACCT+GGG 0.556613 4_2:-13597544 Msa0590200:CDS
TCATCATCAACTATAGCTAA+AGG 0.556791 4_2:+13595504 None:intergenic
GCAAACTTCAGGGACCTAAA+GGG 0.558745 4_2:-13596783 Msa0590200:CDS
ATCAACTATAGCTAAAGGAC+GGG 0.558886 4_2:+13595509 None:intergenic
AAAGAAACCTAAGAAATCTC+CGG 0.559419 4_2:-13601109 Msa0590200:CDS
TTTGTGGCCCTATAAAAGAA+AGG 0.560000 4_2:-13596022 Msa0590200:intron
TTATAATCTTTCAGGTGCAG+TGG 0.561163 4_2:-13598569 Msa0590200:intron
TGATTTGAATGCTTGTGAAG+AGG 0.562683 4_2:-13598977 Msa0590200:CDS
TGAGTTGGTAGCGGATATGA+AGG 0.564641 4_2:+13597750 None:intergenic
TATCTGGGGCGTTATGCTGT+AGG 0.564853 4_2:-13598006 Msa0590200:CDS
TGATCATACAGCAGACCACT+TGG 0.567396 4_2:+13596958 None:intergenic
CTGGTTGTGAGGTTCTGGCC+GGG 0.572588 4_2:+13596422 None:intergenic
TGCTGACATTAAGCTTGTCA+CGG 0.573436 4_2:-13599366 Msa0590200:intron
GTAGCGAGACTTACAGGAAG+AGG 0.577600 4_2:+13598326 None:intergenic
GTGGTCTGCTGTATGATCAC+AGG 0.579654 4_2:-13596954 Msa0590200:CDS
TAGCCTTGCATTCTCTCGAA+TGG 0.582798 4_2:+13596070 None:intergenic
TTACCATTCGAGAGAATGCA+AGG 0.584921 4_2:-13596073 Msa0590200:CDS
CAAATTTCATCGCATAATCC+GGG 0.586118 4_2:+13596602 None:intergenic
CCGGCCAGAACCTCACAACC+AGG 0.586455 4_2:-13596421 Msa0590200:intron
TTGAATGCTTGTGAAGAGGC+TGG 0.588478 4_2:-13598973 Msa0590200:CDS
GGGAGCCAATTGAGGGCTTG+AGG 0.588756 4_2:-13598518 Msa0590200:intron
GCAGCTTTCTTCTGTCGAGA+AGG 0.589725 4_2:+13601036 None:intergenic
AAATGCGGTTGCTGTTCCTG+TGG 0.590835 4_2:-13595628 Msa0590200:CDS
CCAGTGTGTATCCGAGGGCA+AGG 0.592139 4_2:+13595604 None:intergenic
ACCACTAATCCCTTGACAAG+GGG 0.596723 4_2:+13598173 None:intergenic
TGATGGGGTCATATATAAGC+TGG 0.598505 4_2:-13600763 Msa0590200:CDS
TTCTTAACTAAACAATCAAG+AGG 0.600504 4_2:+13599914 None:intergenic
TTGTGTCCACAGTTGTGACC+CGG 0.601223 4_2:-13596440 Msa0590200:CDS
GCGTCACCCAGGTACAACGC+TGG 0.605573 4_2:+13597538 None:intergenic
ACCGTGAAGTGAATGTTGAT+GGG 0.606281 4_2:-13600779 Msa0590200:CDS
GGAAGAAATCAAGATAACAA+TGG 0.607172 4_2:+13595441 None:intergenic
CTAAACCCAGTGTGTATCCG+AGG 0.609698 4_2:+13595598 None:intergenic
CATCAACTATAGCTAAAGGA+CGG 0.609732 4_2:+13595508 None:intergenic
GGATGATAATGCTTATGTCA+AGG 0.611226 4_2:-13600742 Msa0590200:intron
TTTCATCAACGAGATCCCCA+TGG 0.611934 4_2:+13599972 None:intergenic
AATTCGCTGGTGGGTATCTG+GGG 0.614167 4_2:-13598020 Msa0590200:CDS
AGACTACTCTCTGTATGCTA+TGG 0.616712 4_2:-13598889 Msa0590200:CDS
TTATGCTGTAGGACGTCTAG+TGG 0.616930 4_2:-13597995 Msa0590200:CDS
GGTTGACGACCACGTTTACG+CGG 0.618906 4_2:+13601177 None:intergenic
GGTCATCAATTGCGTCACCC+AGG 0.619951 4_2:+13597527 None:intergenic
AGAAGCTGATGATGAAGCAA+TGG 0.621454 4_2:-13598947 Msa0590200:CDS
TCTTAACTAAACAATCAAGA+GGG 0.622164 4_2:+13599915 None:intergenic
TTCTGGCCGGGTCACAACTG+TGG 0.623602 4_2:+13596434 None:intergenic
TCAACCTCATGAGTTGGTAG+CGG 0.625031 4_2:+13597741 None:intergenic
CGGAGACGATGATAAAGTGA+AGG 0.627325 4_2:-13600814 Msa0590200:CDS
GCGTTCTTGGCGTAACGGTG+AGG 0.627909 4_2:+13600931 None:intergenic
GTGCAGGTTATCAAGAACCA+TGG 0.628529 4_2:-13599989 Msa0590200:intron
CAATAGAAGCTCCAAAACAA+AGG 0.629450 4_2:+13599387 None:intergenic
CAGATACACTCTTTCAACAG+AGG 0.630022 4_2:+13596725 None:intergenic
GAATGGGAATGATGGCTGCA+GGG 0.631874 4_2:-13597954 Msa0590200:CDS
CACGCATCCGAAACTGAGGA+AGG 0.633272 4_2:+13597923 None:intergenic
TGACTCCAGTTATGATACAT+GGG 0.636735 4_2:-13598538 Msa0590200:CDS
AGCTCCAAAACAAAGGCCAG+TGG 0.639370 4_2:+13599394 None:intergenic
AAACCACTAATCCCTTGACA+AGG 0.639560 4_2:+13598171 None:intergenic
GACAACTTGGATACTTAAAG+GGG 0.640325 4_2:+13595535 None:intergenic
ATCGAGATCTGTTCTTACCA+CGG 0.643104 4_2:-13597718 Msa0590200:CDS
CTGAAAATCAGTATGAGGAG+TGG 0.643468 4_2:+13597358 None:intergenic
GCAACAATGCCGCGTAAACG+TGG 0.644048 4_2:-13601186 Msa0590200:exon
GACTCTGAAAGTGCACCAAG+TGG 0.647241 4_2:-13596973 Msa0590200:CDS
ATATCATAATATAGATCACA+AGG 0.651488 4_2:+13599746 None:intergenic
TTAAAGGGGAGAGTTGTCAA+AGG 0.651603 4_2:+13595549 None:intergenic
TAAACCCAGTGTGTATCCGA+GGG 0.654894 4_2:+13595599 None:intergenic
AGCTATGGCTTTACCTGGGT+AGG 0.656939 4_2:+13597880 None:intergenic
AAAACACGCATCCGAAACTG+AGG 0.657217 4_2:+13597919 None:intergenic
AGCTGCGCAACGATCTTCGG+TGG 0.659584 4_2:-13601019 Msa0590200:CDS
GGATAGTTCATCTGACTCTG+AGG 0.663849 4_2:-13598926 Msa0590200:CDS
AGTTCTTACTTCAAACTCCG+TGG 0.666173 4_2:+13597701 None:intergenic
AACCACTAATCCCTTGACAA+GGG 0.672154 4_2:+13598172 None:intergenic
TTGAGTAGAACGTTTAACGA+CGG 0.672653 4_2:+13601134 None:intergenic
AAAATTAACATACTGGAGGG+AGG 0.675330 4_2:+13597506 None:intergenic
GTCACCCAGGTACAACGCTG+GGG 0.678324 4_2:+13597540 None:intergenic
CTGTGCAAGTGATAATAATG+TGG 0.685951 4_2:-13599498 Msa0590200:CDS
TATGCGATGAAATTTGTCCG+TGG 0.691048 4_2:-13596595 Msa0590200:CDS
GTACATACAAGTTGGAAATG+CGG 0.691245 4_2:-13595643 Msa0590200:CDS
ATATCCGCTACCAACTCATG+AGG 0.696017 4_2:-13597745 Msa0590200:CDS
CCGTGAAGTGAATGTTGATG+GGG 0.702226 4_2:-13600778 Msa0590200:CDS
GATACACTCTTTCAACAGAG+GGG 0.708698 4_2:+13596727 None:intergenic
CCACTAATCCCTTGACAAGG+GGG 0.708968 4_2:+13598174 None:intergenic
CATACTTAGAGGAAGTACCA+CGG 0.770558 4_2:+13596578 None:intergenic
TCATAATATAGATCACAAGG+AGG 0.772551 4_2:+13599749 None:intergenic
GCAGGTTATCAAGAACCATG+GGG 0.776501 4_2:-13599987 Msa0590200:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCATAATTTAATTATGA+TGG - chr4_2:13597142-13597161 Msa0590200:intron 10.0%
!!! AATAATTTCCTTTTACATTT+TGG - chr4_2:13595395-13595414 Msa0590200:three_prime_UTR 15.0%
!! ATGAAATCAAATAAATGAAT+TGG + chr4_2:13596374-13596393 None:intergenic 15.0%
!!! ATTTATCTGATTTGAAAATA+TGG - chr4_2:13596453-13596472 Msa0590200:CDS 15.0%
!! AAAAAATCAGTAAATTTACA+TGG + chr4_2:13597185-13597204 None:intergenic 15.0%
!! TAAAATTAAAGAATCTGATA+GGG - chr4_2:13597357-13597376 Msa0590200:CDS 15.0%
!!! CTTGTAAAGATTTTTTTTTA+CGG - chr4_2:13597520-13597539 Msa0590200:CDS 15.0%
!! AGAATAATAATAATGTTAGT+AGG + chr4_2:13597708-13597727 None:intergenic 15.0%
!! TTCTAAATTTATAATCTTTC+AGG - chr4_2:13598239-13598258 Msa0590200:intron 15.0%
!! CATAAAAAATAAGCAATTAT+TGG - chr4_2:13598704-13598723 Msa0590200:intron 15.0%
!! TATAATATCAATTCAAGATA+TGG + chr4_2:13599948-13599967 None:intergenic 15.0%
!!! TTTTTTCAATTAAACTTATC+TGG - chr4_2:13600554-13600573 Msa0590200:intron 15.0%
!!! ATTTTGTTGTAAATATAGAA+GGG + chr4_2:13600928-13600947 None:intergenic 15.0%
!!! AATTTTGTTGTAAATATAGA+AGG + chr4_2:13600929-13600948 None:intergenic 15.0%
!!! AAGTTTTTTAGTGTAATTGT+GGG + chr4_2:13595373-13595392 None:intergenic 20.0%
!!! AAAGTTTTTTAGTGTAATTG+TGG + chr4_2:13595374-13595393 None:intergenic 20.0%
!!! TATTTTGACCAAAATGTAAA+AGG + chr4_2:13595406-13595425 None:intergenic 20.0%
!! TTTATTAGTTCACAATTTCA+AGG - chr4_2:13595938-13595957 Msa0590200:intron 20.0%
!!! ATGTAGAAAATTGTGTTTTA+AGG - chr4_2:13596160-13596179 Msa0590200:intron 20.0%
!!! ATGTTGAAAATTGTGTTTTA+AGG - chr4_2:13596235-13596254 Msa0590200:intron 20.0%
!!! GTAAAATAGTATTCTTTTTC+AGG + chr4_2:13596694-13596713 None:intergenic 20.0%
!!! GAATTTTATTTGTTGTGTTT+TGG - chr4_2:13596754-13596773 Msa0590200:CDS 20.0%
!!! TTGGTTTTGTTTATATGTTT+AGG - chr4_2:13596773-13596792 Msa0590200:CDS 20.0%
!!! TGGTTTTGTTTATATGTTTA+GGG - chr4_2:13596774-13596793 Msa0590200:CDS 20.0%
!!! TTTGTATGATTTTTAGAGTT+TGG - chr4_2:13596994-13597013 Msa0590200:CDS 20.0%
!! TTTCATTTGATATATACTAC+AGG - chr4_2:13597024-13597043 Msa0590200:intron 20.0%
!! ATATCATAATATAGATCACA+AGG + chr4_2:13597073-13597092 None:intergenic 20.0%
!! ATGTTTGAAAAAGTTAGATA+TGG + chr4_2:13597109-13597128 None:intergenic 20.0%
!!! GATTTTTTTAATGTTGATTG+TGG - chr4_2:13597197-13597216 Msa0590200:intron 20.0%
!! CTAAAATTAAAGAATCTGAT+AGG - chr4_2:13597356-13597375 Msa0590200:CDS 20.0%
!! ACTTTATTAGATTTGTATTC+TGG - chr4_2:13597385-13597404 Msa0590200:CDS 20.0%
!! CTTTATTAGATTTGTATTCT+GGG - chr4_2:13597386-13597405 Msa0590200:CDS 20.0%
!!! TAATTTGCATAATGTTTCAT+TGG - chr4_2:13597482-13597501 Msa0590200:intron 20.0%
!! AACAATGAAAATTGTTACAA+TGG + chr4_2:13597672-13597691 None:intergenic 20.0%
!! TATTATTCTTACTATCCTTT+AGG - chr4_2:13597719-13597738 Msa0590200:CDS 20.0%
!!! TTTTATCTCTTTTAAAAGAG+TGG - chr4_2:13597766-13597785 Msa0590200:intron 20.0%
!!! CAAGTTTTTATGTAAAAACA+TGG - chr4_2:13598184-13598203 Msa0590200:CDS 20.0%
!! TAAATAATGCAAGATTCTAA+CGG - chr4_2:13598394-13598413 Msa0590200:intron 20.0%
!!! TTATTTTTTATGTCATCCAT+AGG + chr4_2:13598696-13598715 None:intergenic 20.0%
!! TTCTCCATCAATATATATTT+AGG + chr4_2:13598759-13598778 None:intergenic 20.0%
!!! TATAACTAAAGTTTTGTATG+TGG - chr4_2:13599708-13599727 Msa0590200:CDS 20.0%
!! ATAATTCATGTTAATGATGA+AGG + chr4_2:13599777-13599796 None:intergenic 20.0%
!!! TCATCGTTATTTAACTTATA+TGG + chr4_2:13599888-13599907 None:intergenic 20.0%
!! ATGCACAATTAAAATTTACA+GGG + chr4_2:13599995-13600014 None:intergenic 20.0%
!! AATGCACAATTAAAATTTAC+AGG + chr4_2:13599996-13600015 None:intergenic 20.0%
!!! CATTGGTTTTACAAAATATA+AGG + chr4_2:13600442-13600461 None:intergenic 20.0%
!! CATAATAAATGTTCATTGTT+TGG - chr4_2:13600602-13600621 Msa0590200:intron 20.0%
!!! CTCTAAGTTATTTTATGTAT+AGG - chr4_2:13600690-13600709 Msa0590200:intron 20.0%
!!! ATACATACCTTTCTTTTATA+GGG + chr4_2:13600804-13600823 None:intergenic 20.0%
!!! AATACATACCTTTCTTTTAT+AGG + chr4_2:13600805-13600824 None:intergenic 20.0%
!!! AAGATGTTATAGTTTAAGTT+TGG - chr4_2:13601099-13601118 Msa0590200:CDS 20.0%
! GAAAAGTAGCAAAAATTAAG+CGG - chr4_2:13595461-13595480 Msa0590200:three_prime_UTR 25.0%
!!! GCGCTTTTTTTTTTTGTTTA+GGG + chr4_2:13595593-13595612 None:intergenic 25.0%
!!! AGCGCTTTTTTTTTTTGTTT+AGG + chr4_2:13595594-13595613 None:intergenic 25.0%
! TAAGGTTTGTATCTTTGATT+TGG - chr4_2:13596178-13596197 Msa0590200:intron 25.0%
!! TGAAATCATAATTTTCAACC+TGG + chr4_2:13596276-13596295 None:intergenic 25.0%
! TAAAAACACAATATTCAGCA+TGG + chr4_2:13596535-13596554 None:intergenic 25.0%
!! ATGCTGAATATTGTGTTTTT+AGG - chr4_2:13596534-13596553 Msa0590200:intron 25.0%
!!! TGCTGAATATTGTGTTTTTA+GGG - chr4_2:13596535-13596554 Msa0590200:intron 25.0%
! TTGATTTATGAATGTTGTTC+AGG - chr4_2:13596615-13596634 Msa0590200:intron 25.0%
! TGATTTATGAATGTTGTTCA+GGG - chr4_2:13596616-13596635 Msa0590200:intron 25.0%
!! TTTAGGGTTATTGTTGAATT+TGG - chr4_2:13596790-13596809 Msa0590200:intron 25.0%
! TCTTAACTAAACAATCAAGA+GGG + chr4_2:13596904-13596923 None:intergenic 25.0%
! TTCTTAACTAAACAATCAAG+AGG + chr4_2:13596905-13596924 None:intergenic 25.0%
!!! ACTTTTTCAAACATTGACAA+TGG - chr4_2:13597115-13597134 Msa0590200:intron 25.0%
!!! TAATGTTTTTGACTTTGAAG+AGG - chr4_2:13597549-13597568 Msa0590200:CDS 25.0%
! ACATAATAAATTATCTTGCG+AGG - chr4_2:13598037-13598056 Msa0590200:CDS 25.0%
!!! CTTTGTAGTTAGTTTTATCT+AGG - chr4_2:13598082-13598101 Msa0590200:CDS 25.0%
! ATTTAACAGCAATTGTAAAG+AGG - chr4_2:13598423-13598442 Msa0590200:intron 25.0%
! ATGAAAGAATTTGTCACTAA+AGG - chr4_2:13598448-13598467 Msa0590200:intron 25.0%
! GAAGCCTAAATATATATTGA+TGG - chr4_2:13598752-13598771 Msa0590200:intron 25.0%
!!! AATTTTAGTACAACAAGCTA+TGG + chr4_2:13598954-13598973 None:intergenic 25.0%
!!! TTGTGACTTTTTCTTAGATA+AGG - chr4_2:13599155-13599174 Msa0590200:intron 25.0%
! TGTTTGATAAAAGAAAACCA+AGG + chr4_2:13599397-13599416 None:intergenic 25.0%
!!! TTGGTTTTCTTTTATCAAAC+AGG - chr4_2:13599396-13599415 Msa0590200:CDS 25.0%
! TATATCAGATTAAAGAGAAG+TGG - chr4_2:13599484-13599503 Msa0590200:CDS 25.0%
!!! GTTTTGAAGTATATTAGTCT+TGG - chr4_2:13599529-13599548 Msa0590200:CDS 25.0%
!! GCTTGTTAATAAGAATAAAG+TGG - chr4_2:13600059-13600078 Msa0590200:intron 25.0%
! TAATAAGAATAAAGTGGAGT+TGG - chr4_2:13600065-13600084 Msa0590200:intron 25.0%
! ACAACTTAGAAAAAATAACC+TGG + chr4_2:13600416-13600435 None:intergenic 25.0%
! AATGTTTCAATCTTTAATGC+AGG - chr4_2:13601151-13601170 Msa0590200:CDS 25.0%
! CACATTAAATATTCACACTT+TGG - chr4_2:13601467-13601486 Msa0590200:five_prime_UTR 25.0%
AAAGAAACCTAAGAAATCTC+CGG - chr4_2:13595707-13595726 Msa0590200:intron 30.0%
!! TTGTATCTTTGATTTGGTGT+TGG - chr4_2:13596184-13596203 Msa0590200:intron 30.0%
AGGTTTATTTGTTTGATTCC+AGG - chr4_2:13596255-13596274 Msa0590200:intron 30.0%
AAGACAAGATATTCTCAACA+TGG + chr4_2:13596426-13596445 None:intergenic 30.0%
GTTGAGAATATCTTGTCTTA+AGG - chr4_2:13596427-13596446 Msa0590200:CDS 30.0%
! CTTGTTGAGAATGTGTTTTA+GGG - chr4_2:13596494-13596513 Msa0590200:intron 30.0%
! AATACTATTTTACTGCTCAG+TGG - chr4_2:13596701-13596720 Msa0590200:intron 30.0%
TTCAATCTTTACCGTATCTT+CGG + chr4_2:13596737-13596756 None:intergenic 30.0%
TCATAATATAGATCACAAGG+AGG + chr4_2:13597070-13597089 None:intergenic 30.0%
! TCTACAATTTCAAGTGAATC+TGG - chr4_2:13597286-13597305 Msa0590200:intron 30.0%
! CTACAATTTCAAGTGAATCT+GGG - chr4_2:13597287-13597306 Msa0590200:intron 30.0%
AAATAACCGCTAAAGTTACA+AGG + chr4_2:13598214-13598233 None:intergenic 30.0%
ATTTGTCACTAAAGGATATG+AGG - chr4_2:13598456-13598475 Msa0590200:intron 30.0%
! GTCTGTGTTACTCATTAAAT+TGG - chr4_2:13598566-13598585 Msa0590200:intron 30.0%
ATGCATTATCAAGCTAGAAT+GGG - chr4_2:13598846-13598865 Msa0590200:intron 30.0%
TAGATAAGGAACACTGTAAT+TGG - chr4_2:13599169-13599188 Msa0590200:intron 30.0%
! AAGTTCTAATCAATGTGATC+TGG - chr4_2:13599193-13599212 Msa0590200:intron 30.0%
TGTCATAATGCAGGAAATTA+CGG - chr4_2:13599220-13599239 Msa0590200:CDS 30.0%
AGCAAAATTAACATACTGGA+GGG + chr4_2:13599316-13599335 None:intergenic 30.0%
TGTGAGCAAAATTAACATAC+TGG + chr4_2:13599320-13599339 None:intergenic 30.0%
TTTGATTCCATTTCTTTCCT+TGG - chr4_2:13599377-13599396 Msa0590200:CDS 30.0%
AAGAAAACCAAGGAAAGAAA+TGG + chr4_2:13599387-13599406 None:intergenic 30.0%
! AGTGATGATGAAAAGAGTTA+TGG - chr4_2:13599433-13599452 Msa0590200:CDS 30.0%
! GTGATGATGAAAAGAGTTAT+GGG - chr4_2:13599434-13599453 Msa0590200:CDS 30.0%
! TATCTCTGAAAATCAGTATG+AGG + chr4_2:13599466-13599485 None:intergenic 30.0%
!! AGTAATTTGTTGTCTTTGCA+TGG - chr4_2:13599565-13599584 Msa0590200:CDS 30.0%
! ATATCCTTGCTGCTTATATA+AGG - chr4_2:13599655-13599674 Msa0590200:intron 30.0%
! AAAGAGTGTATCTGAAATCT+GGG - chr4_2:13600100-13600119 Msa0590200:CDS 30.0%
CAAAAGAAGATTAGTACCAA+AGG + chr4_2:13600129-13600148 None:intergenic 30.0%
TCAAAATAAATGCATCGCTA+AGG + chr4_2:13600152-13600171 None:intergenic 30.0%
CTACACAAAAAAAAAAGGCT+TGG + chr4_2:13600192-13600211 None:intergenic 30.0%
!!! CAAGCCTTTTTTTTTTGTGT+AGG - chr4_2:13600190-13600209 Msa0590200:intron 30.0%
!!! TTTTTTTTTTGTGTAGGTCC+CGG - chr4_2:13600196-13600215 Msa0590200:intron 30.0%
ACAAATTTCATCGCATAATC+CGG + chr4_2:13600218-13600237 None:intergenic 30.0%
ATGCAAATGTACATACTTAG+AGG + chr4_2:13600252-13600271 None:intergenic 30.0%
ATTTATCTGCTGAATACAAC+AGG - chr4_2:13600325-13600344 Msa0590200:intron 30.0%
! TAAAGAGGTTTTGCAATTTG+AGG + chr4_2:13600478-13600497 None:intergenic 30.0%
AGGTATGTAACATTTCTCAA+GGG + chr4_2:13600514-13600533 None:intergenic 30.0%
AAGGTATGTAACATTTCTCA+AGG + chr4_2:13600515-13600534 None:intergenic 30.0%
GAGAAATGTTACATACCTTA+AGG - chr4_2:13600516-13600535 Msa0590200:intron 30.0%
TGCTAACATGATAATCCTTA+AGG + chr4_2:13600534-13600553 None:intergenic 30.0%
! ATTGTTTGGACTTGTTTAAG+TGG - chr4_2:13600616-13600635 Msa0590200:intron 30.0%
! AGAAAGGTATGTATTTGAAC+TGG - chr4_2:13600810-13600829 Msa0590200:CDS 30.0%
!! TTAGAAAACTTCTGTTTCTG+TGG - chr4_2:13600877-13600896 Msa0590200:intron 30.0%
AGACAACTTGGATACTTAAA+GGG + chr4_2:13601285-13601304 None:intergenic 30.0%
AAGACAACTTGGATACTTAA+AGG + chr4_2:13601286-13601305 None:intergenic 30.0%
TCATCATCAACTATAGCTAA+AGG + chr4_2:13601315-13601334 None:intergenic 30.0%
!! TTAGCTATAGTTGATGATGA+TGG - chr4_2:13601315-13601334 Msa0590200:five_prime_UTR 30.0%
GGAAAAGACATGAATTAATG+AGG + chr4_2:13601357-13601376 None:intergenic 30.0%
GGAAGAAATCAAGATAACAA+TGG + chr4_2:13601378-13601397 None:intergenic 30.0%
! TCTTGGCTTGAAAATGAAAA+TGG + chr4_2:13601399-13601418 None:intergenic 30.0%
!! AAACTCTGGAATTGTATGAA+TGG - chr4_2:13601425-13601444 Msa0590200:five_prime_UTR 30.0%
!! ATCATTTTTGACACGATTCG+TGG + chr4_2:13595335-13595354 None:intergenic 35.0%
TTGAGTAGAACGTTTAACGA+CGG + chr4_2:13595685-13595704 None:intergenic 35.0%
! TCTTTTACCGGAGATTTCTT+AGG + chr4_2:13595717-13595736 None:intergenic 35.0%
! TCTTCGACGATTTCTTTTAC+CGG + chr4_2:13595729-13595748 None:intergenic 35.0%
!!! GACGACGATTCATTTTTTGT+CGG - chr4_2:13595825-13595844 Msa0590200:intron 35.0%
! GGATGATAATGCTTATGTCA+AGG - chr4_2:13596074-13596093 Msa0590200:CDS 35.0%
CCTAAAACACATTCTCAACA+AGG + chr4_2:13596496-13596515 None:intergenic 35.0%
! CCTTGTTGAGAATGTGTTTT+AGG - chr4_2:13596493-13596512 Msa0590200:intron 35.0%
AGACTATATTGCTGCAATTG+TGG - chr4_2:13596654-13596673 Msa0590200:intron 35.0%
CACATTATTATCACTTGCAC+AGG + chr4_2:13597320-13597339 None:intergenic 35.0%
CTGTGCAAGTGATAATAATG+TGG - chr4_2:13597318-13597337 Msa0590200:intron 35.0%
GATAATAATGTGGCTGAAGA+AGG - chr4_2:13597328-13597347 Msa0590200:intron 35.0%
TTAAAGAATCTGATAGGGAG+TGG - chr4_2:13597362-13597381 Msa0590200:CDS 35.0%
TTAGATTTGTATTCTGGGTG+TGG - chr4_2:13597391-13597410 Msa0590200:CDS 35.0%
CAATAGAAGCTCCAAAACAA+AGG + chr4_2:13597432-13597451 None:intergenic 35.0%
TTAAGCTTGTCACGGTATTT+AGG - chr4_2:13597458-13597477 Msa0590200:intron 35.0%
!!! TGTTTTTGACTTTGAAGAGG+TGG - chr4_2:13597552-13597571 Msa0590200:CDS 35.0%
!!! GTTTTTGACTTTGAAGAGGT+GGG - chr4_2:13597553-13597572 Msa0590200:CDS 35.0%
CCAAAACATACATGAGTTTC+AGG + chr4_2:13597626-13597645 None:intergenic 35.0%
! CCTGAAACTCATGTATGTTT+TGG - chr4_2:13597623-13597642 Msa0590200:intron 35.0%
TTCTTACTATCCTTTAGGTG+AGG - chr4_2:13597724-13597743 Msa0590200:CDS 35.0%
! TGTGAGAAGTTTGTTCTGAA+TGG - chr4_2:13597798-13597817 Msa0590200:intron 35.0%
TGATTTGAATGCTTGTGAAG+AGG - chr4_2:13597839-13597858 Msa0590200:intron 35.0%
!! CCTAGTTTTTCATCTTCGTT+GGG + chr4_2:13597957-13597976 None:intergenic 35.0%
!! TCCTAGTTTTTCATCTTCGT+TGG + chr4_2:13597958-13597977 None:intergenic 35.0%
ATAAATTATCTTGCGAGGAC+TGG - chr4_2:13598042-13598061 Msa0590200:CDS 35.0%
! TTATAATCTTTCAGGTGCAG+TGG - chr4_2:13598247-13598266 Msa0590200:intron 35.0%
ATGACTCCAGTTATGATACA+TGG - chr4_2:13598277-13598296 Msa0590200:intron 35.0%
TGACTCCAGTTATGATACAT+GGG - chr4_2:13598278-13598297 Msa0590200:intron 35.0%
CTTAAGTGAAGCAAAGATAG+AGG + chr4_2:13598341-13598360 None:intergenic 35.0%
TAAGTCTCGCTACTCATTAT+TGG - chr4_2:13598500-13598519 Msa0590200:intron 35.0%
AACCATTAGAGGTCAAAGAA+GGG + chr4_2:13598538-13598557 None:intergenic 35.0%
AAACCATTAGAGGTCAAAGA+AGG + chr4_2:13598539-13598558 None:intergenic 35.0%
TTAGTGGTTTCAATCGCTTT+AGG - chr4_2:13598658-13598677 Msa0590200:intron 35.0%
TAGGAACAAAAATGCTCCTA+TGG - chr4_2:13598677-13598696 Msa0590200:intron 35.0%
!!! GTTGACATTTTGAAATTCGC+TGG - chr4_2:13598783-13598802 Msa0590200:intron 35.0%
!!! ACATTTTGAAATTCGCTGGT+GGG - chr4_2:13598787-13598806 Msa0590200:intron 35.0%
!! CATTCTAGCTTGATAATGCA+TGG + chr4_2:13598847-13598866 None:intergenic 35.0%
CATGCATTATCAAGCTAGAA+TGG - chr4_2:13598845-13598864 Msa0590200:intron 35.0%
AAAATTAACATACTGGAGGG+AGG + chr4_2:13599313-13599332 None:intergenic 35.0%
GAGCAAAATTAACATACTGG+AGG + chr4_2:13599317-13599336 None:intergenic 35.0%
! GACTGTATTTTGTCTGTCTT+TGG - chr4_2:13599677-13599696 Msa0590200:intron 35.0%
AGATATGGAACCTTCTTCTT+TGG + chr4_2:13599933-13599952 None:intergenic 35.0%
!!! TGTGCATTCTTGCCTTTTTT+AGG - chr4_2:13600008-13600027 Msa0590200:intron 35.0%
!!! GTGCATTCTTGCCTTTTTTA+GGG - chr4_2:13600009-13600028 Msa0590200:intron 35.0%
!!! TGCATTCTTGCCTTTTTTAG+GGG - chr4_2:13600010-13600029 Msa0590200:intron 35.0%
TATTAACAAGCACACCCTTT+AGG + chr4_2:13600050-13600069 None:intergenic 35.0%
AGATACACTCTTTCAACAGA+GGG + chr4_2:13600093-13600112 None:intergenic 35.0%
! GAAAGAGTGTATCTGAAATC+TGG - chr4_2:13600099-13600118 Msa0590200:CDS 35.0%
GGGACCTACACAAAAAAAAA+AGG + chr4_2:13600197-13600216 None:intergenic 35.0%
CAAATTTCATCGCATAATCC+GGG + chr4_2:13600217-13600236 None:intergenic 35.0%
GAAAAAATAACCTGGTTGTG+AGG + chr4_2:13600408-13600427 None:intergenic 35.0%
GTATGTAACATTTCTCAAGG+GGG + chr4_2:13600512-13600531 None:intergenic 35.0%
GGTATGTAACATTTCTCAAG+GGG + chr4_2:13600513-13600532 None:intergenic 35.0%
TTATGAGTGAAGTTCAAGCA+AGG + chr4_2:13600587-13600606 None:intergenic 35.0%
CCACAAAGTTTATAGCAATC+TGG + chr4_2:13600781-13600800 None:intergenic 35.0%
CCAGATTGCTATAAACTTTG+TGG - chr4_2:13600778-13600797 Msa0590200:CDS 35.0%
TTTGTGGCCCTATAAAAGAA+AGG - chr4_2:13600794-13600813 Msa0590200:CDS 35.0%
AACTGCTCAATAACTCCTAA+GGG - chr4_2:13600995-13601014 Msa0590200:CDS 35.0%
! AAAGTTCTGACTAATCCCTT+AGG + chr4_2:13601013-13601032 None:intergenic 35.0%
!!! GGGATTAGTCAGAACTTTTT+AGG - chr4_2:13601015-13601034 Msa0590200:CDS 35.0%
TAATGCAGGTACATACAAGT+TGG - chr4_2:13601165-13601184 Msa0590200:CDS 35.0%
! GTACATACAAGTTGGAAATG+CGG - chr4_2:13601173-13601192 Msa0590200:CDS 35.0%
GACAACTTGGATACTTAAAG+GGG + chr4_2:13601284-13601303 None:intergenic 35.0%
ATCAACTATAGCTAAAGGAC+GGG + chr4_2:13601310-13601329 None:intergenic 35.0%
CATCAACTATAGCTAAAGGA+CGG + chr4_2:13601311-13601330 None:intergenic 35.0%
TTCCAGAGTTTGAATACTCT+TGG + chr4_2:13601416-13601435 None:intergenic 35.0%
!! TTCGTGGAGGAATTTTGAAG+TGG + chr4_2:13595319-13595338 None:intergenic 40.0%
! ATTTTTGACACGATTCGTGG+AGG + chr4_2:13595332-13595351 None:intergenic 40.0%
! TGAAGTTTTGCAACAAGAGC+GGG + chr4_2:13595504-13595523 None:intergenic 40.0%
! CTGAAGTTTTGCAACAAGAG+CGG + chr4_2:13595505-13595524 None:intergenic 40.0%
AATCGTCGAAGAAGAAGAAC+TGG - chr4_2:13595737-13595756 Msa0590200:intron 40.0%
! TTTTGTCGGAGAACCTTTTC+CGG - chr4_2:13595839-13595858 Msa0590200:intron 40.0%
AACAAAAACTCACGCGTTCT+TGG + chr4_2:13595901-13595920 None:intergenic 40.0%
CTTCACTTTATCATCGTCTC+CGG + chr4_2:13596004-13596023 None:intergenic 40.0%
TACCGTGAAGTGAATGTTGA+TGG - chr4_2:13596036-13596055 Msa0590200:CDS 40.0%
ACCGTGAAGTGAATGTTGAT+GGG - chr4_2:13596037-13596056 Msa0590200:CDS 40.0%
TGATGGGGTCATATATAAGC+TGG - chr4_2:13596053-13596072 Msa0590200:CDS 40.0%
AATGTTGTTCAGGGAGAAGA+GGG - chr4_2:13596625-13596644 Msa0590200:intron 40.0%
! GTTTTACAGAGCCGAAGATA+CGG - chr4_2:13596723-13596742 Msa0590200:CDS 40.0%
TGCAGGTTATCAAGAACCAT+GGG - chr4_2:13596828-13596847 Msa0590200:intron 40.0%
! CAACACAAAGCACTTACATC+AGG + chr4_2:13596950-13596969 None:intergenic 40.0%
GGAAGGTTCTGTATCAATCA+GGG + chr4_2:13597227-13597246 None:intergenic 40.0%
TGGAAGGTTCTGTATCAATC+AGG + chr4_2:13597228-13597247 None:intergenic 40.0%
TGCTGACATTAAGCTTGTCA+CGG - chr4_2:13597450-13597469 Msa0590200:intron 40.0%
! AGAAGCTGATGATGAAGCAA+TGG - chr4_2:13597869-13597888 Msa0590200:intron 40.0%
!! ATCTGACTCTGAGGTATTTG+AGG - chr4_2:13597899-13597918 Msa0590200:CDS 40.0%
AGACTACTCTCTGTATGCTA+TGG - chr4_2:13597927-13597946 Msa0590200:CDS 40.0%
CCCAACGAAGATGAAAAACT+AGG - chr4_2:13597954-13597973 Msa0590200:CDS 40.0%
TAATGAGTAGCGAGACTTAC+AGG + chr4_2:13598499-13598518 None:intergenic 40.0%
ACCATTAGAGGTCAAAGAAG+GGG + chr4_2:13598537-13598556 None:intergenic 40.0%
GACAGTTGACAAACCATTAG+AGG + chr4_2:13598549-13598568 None:intergenic 40.0%
TACTACTTTGTGCTTGTCCA+GGG - chr4_2:13598594-13598613 Msa0590200:intron 40.0%
AAATGAAATCAGCTTGACCC+TGG + chr4_2:13598614-13598633 None:intergenic 40.0%
! GGTCAAGCTGATTTCATTTG+TGG - chr4_2:13598615-13598634 Msa0590200:intron 40.0%
! CAAGCTGATTTCATTTGTGG+TGG - chr4_2:13598618-13598637 Msa0590200:intron 40.0%
AACCACTAATCCCTTGACAA+GGG + chr4_2:13598647-13598666 None:intergenic 40.0%
AAACCACTAATCCCTTGACA+AGG + chr4_2:13598648-13598667 None:intergenic 40.0%
!!! GACATTTTGAAATTCGCTGG+TGG - chr4_2:13598786-13598805 Msa0590200:intron 40.0%
TCAAGCTAGAATGGGAATGA+TGG - chr4_2:13598854-13598873 Msa0590200:CDS 40.0%
! TTCGGATGCGTGTTTTTCTT+TGG - chr4_2:13598904-13598923 Msa0590200:CDS 40.0%
! TCGGATGCGTGTTTTTCTTT+GGG - chr4_2:13598905-13598924 Msa0590200:CDS 40.0%
! AACAAGCTATGGCTTTACCT+GGG + chr4_2:13598943-13598962 None:intergenic 40.0%
ATCGAGATCTGTTCTTACCA+CGG - chr4_2:13599098-13599117 Msa0590200:intron 40.0%
AGTTCTTACTTCAAACTCCG+TGG + chr4_2:13599118-13599137 None:intergenic 40.0%
TCTGGCTATTGTCATAATGC+AGG - chr4_2:13599211-13599230 Msa0590200:CDS 40.0%
CTGAAAATCAGTATGAGGAG+TGG + chr4_2:13599461-13599480 None:intergenic 40.0%
CAGTCCTTATATAAGCAGCA+AGG + chr4_2:13599662-13599681 None:intergenic 40.0%
!! TGTTTTCTCCTCTCTAGAGA+TGG - chr4_2:13599806-13599825 Msa0590200:intron 40.0%
! GTAATTCACCATCTCTAGAG+AGG + chr4_2:13599817-13599836 None:intergenic 40.0%
TTGCCTCATTCCAAAGAAGA+AGG - chr4_2:13599920-13599939 Msa0590200:CDS 40.0%
!! GAACCTTCTTCTTTGGAATG+AGG + chr4_2:13599926-13599945 None:intergenic 40.0%
!!! GCATTCTTGCCTTTTTTAGG+GGG - chr4_2:13600011-13600030 Msa0590200:intron 40.0%
TGAAGTTTGCCCCCTAAAAA+AGG + chr4_2:13600023-13600042 None:intergenic 40.0%
!!! TTTTTTAGGGGGCAAACTTC+AGG - chr4_2:13600022-13600041 Msa0590200:intron 40.0%
!! TTTTTAGGGGGCAAACTTCA+GGG - chr4_2:13600023-13600042 Msa0590200:intron 40.0%
GATACACTCTTTCAACAGAG+GGG + chr4_2:13600092-13600111 None:intergenic 40.0%
CAGATACACTCTTTCAACAG+AGG + chr4_2:13600094-13600113 None:intergenic 40.0%
TATGCGATGAAATTTGTCCG+TGG - chr4_2:13600221-13600240 Msa0590200:intron 40.0%
!! CATACTTAGAGGAAGTACCA+CGG + chr4_2:13600241-13600260 None:intergenic 40.0%
CAATTTGAGGATAGCATGAG+TGG + chr4_2:13600465-13600484 None:intergenic 40.0%
TGAAGTTCAAGCAAGGAACA+TGG + chr4_2:13600580-13600599 None:intergenic 40.0%
GTAAGAACTCTGTCTTGCTT+TGG + chr4_2:13600727-13600746 None:intergenic 40.0%
TTACCATTCGAGAGAATGCA+AGG - chr4_2:13600743-13600762 Msa0590200:CDS 40.0%
CAACTGCTCAATAACTCCTA+AGG - chr4_2:13600994-13601013 Msa0590200:CDS 40.0%
ACACTGGGTTTAGCAATTCA+AGG - chr4_2:13601228-13601247 Msa0590200:five_prime_UTR 40.0%
TTAAAGGGGAGAGTTGTCAA+AGG + chr4_2:13601270-13601289 None:intergenic 40.0%
!! AGCCAAGAGTATTCAAACTC+TGG - chr4_2:13601411-13601430 Msa0590200:five_prime_UTR 40.0%
TTTCCAGTTACACTGTGAGC+TGG - chr4_2:13595429-13595448 Msa0590200:three_prime_UTR 45.0%
AGTTACACTGTGAGCTGGTT+GGG - chr4_2:13595434-13595453 Msa0590200:three_prime_UTR 45.0%
!!! ACGGCGTCATTTTGCTGTTT+CGG + chr4_2:13595666-13595685 None:intergenic 45.0%
TTCTGTCGAGAAGGAAGTGA+CGG + chr4_2:13595774-13595793 None:intergenic 45.0%
!! CCAACGGGTTTTTGCTTCAT+CGG + chr4_2:13595865-13595884 None:intergenic 45.0%
TACGTTTGTGCGCTTTGTAG+TGG - chr4_2:13595976-13595995 Msa0590200:intron 45.0%
CGGAGACGATGATAAAGTGA+AGG - chr4_2:13596002-13596021 Msa0590200:intron 45.0%
CCCCATCAACATTCACTTCA+CGG + chr4_2:13596041-13596060 None:intergenic 45.0%
CCGTGAAGTGAATGTTGATG+GGG - chr4_2:13596038-13596057 Msa0590200:CDS 45.0%
GAATGTTGTTCAGGGAGAAG+AGG - chr4_2:13596624-13596643 Msa0590200:intron 45.0%
GGTGATTTGAATGTGTGTGC+AGG - chr4_2:13596811-13596830 Msa0590200:intron 45.0%
GTGCAGGTTATCAAGAACCA+TGG - chr4_2:13596827-13596846 Msa0590200:intron 45.0%
GCAGGTTATCAAGAACCATG+GGG - chr4_2:13596829-13596848 Msa0590200:intron 45.0%
TTTCATCAACGAGATCCCCA+TGG + chr4_2:13596847-13596866 None:intergenic 45.0%
! GGGATCTCGTTGATGAAAAG+AGG - chr4_2:13596849-13596868 Msa0590200:intron 45.0%
GTCTCGCTTTCTATTCTGGA+AGG + chr4_2:13597244-13597263 None:intergenic 45.0%
AGCAGTCTCGCTTTCTATTC+TGG + chr4_2:13597248-13597267 None:intergenic 45.0%
ATTATCACTTGCACAGGCGT+TGG + chr4_2:13597314-13597333 None:intergenic 45.0%
!!! ATGTCCACTGGCCTTTGTTT+TGG - chr4_2:13597418-13597437 Msa0590200:intron 45.0%
CAATGGCAAGCATCAACTAC+AGG + chr4_2:13597655-13597674 None:intergenic 45.0%
CTGTCTCATTCCTCACCTAA+AGG + chr4_2:13597737-13597756 None:intergenic 45.0%
TTGAATGCTTGTGAAGAGGC+TGG - chr4_2:13597843-13597862 Msa0590200:intron 45.0%
GGATAGTTCATCTGACTCTG+AGG - chr4_2:13597890-13597909 Msa0590200:intron 45.0%
GGCTCACCTTGTAACTTTAG+CGG - chr4_2:13598205-13598224 Msa0590200:intron 45.0%
! AATCTTTCAGGTGCAGTGGA+AGG - chr4_2:13598251-13598270 Msa0590200:intron 45.0%
! ATCTTTCAGGTGCAGTGGAA+GGG - chr4_2:13598252-13598271 Msa0590200:intron 45.0%
TGGCTCCCATGTATCATAAC+TGG + chr4_2:13598286-13598305 None:intergenic 45.0%
TGATACATGGGAGCCAATTG+AGG - chr4_2:13598290-13598309 Msa0590200:intron 45.0%
GATACATGGGAGCCAATTGA+GGG - chr4_2:13598291-13598310 Msa0590200:intron 45.0%
GTATACCTCAAGCCCTCAAT+TGG + chr4_2:13598306-13598325 None:intergenic 45.0%
ACCCCTTCTTTGACCTCTAA+TGG - chr4_2:13598533-13598552 Msa0590200:CDS 45.0%
GTACTACTTTGTGCTTGTCC+AGG - chr4_2:13598593-13598612 Msa0590200:intron 45.0%
ACCACTAATCCCTTGACAAG+GGG + chr4_2:13598646-13598665 None:intergenic 45.0%
! AAATTCGCTGGTGGGTATCT+GGG - chr4_2:13598795-13598814 Msa0590200:intron 45.0%
TTATGCTGTAGGACGTCTAG+TGG - chr4_2:13598821-13598840 Msa0590200:intron 45.0%
AAAACACGCATCCGAAACTG+AGG + chr4_2:13598900-13598919 None:intergenic 45.0%
! CGGATGCGTGTTTTTCTTTG+GGG - chr4_2:13598906-13598925 Msa0590200:CDS 45.0%
! CAACAAGCTATGGCTTTACC+TGG + chr4_2:13598944-13598963 None:intergenic 45.0%
!! TGAGTTGGTAGCGGATATGA+AGG + chr4_2:13599069-13599088 None:intergenic 45.0%
ATATCCGCTACCAACTCATG+AGG - chr4_2:13599071-13599090 Msa0590200:CDS 45.0%
!! TCAACCTCATGAGTTGGTAG+CGG + chr4_2:13599078-13599097 None:intergenic 45.0%
CTCGATTCAACCTCATGAGT+TGG + chr4_2:13599084-13599103 None:intergenic 45.0%
TGATCATACAGCAGACCACT+TGG + chr4_2:13599861-13599880 None:intergenic 45.0%
GCAAACTTCAGGGACCTAAA+GGG - chr4_2:13600033-13600052 Msa0590200:intron 45.0%
! TCTGAAATCTGGGAAGCCTT+TGG - chr4_2:13600110-13600129 Msa0590200:CDS 45.0%
GCTGAATACAACAGGCCATT+TGG - chr4_2:13600333-13600352 Msa0590200:intron 45.0%
ATAACCTGGTTGTGAGGTTC+TGG + chr4_2:13600402-13600421 None:intergenic 45.0%
!! GGGGCAACATTGCTTTAAAG+AGG + chr4_2:13600493-13600512 None:intergenic 45.0%
! GAACTCTGTCTTGCTTTGGA+TGG + chr4_2:13600723-13600742 None:intergenic 45.0%
! TAGCCTTGCATTCTCTCGAA+TGG + chr4_2:13600749-13600768 None:intergenic 45.0%
TAAACCCAGTGTGTATCCGA+GGG + chr4_2:13601220-13601239 None:intergenic 45.0%
TTAGCAATTCAAGGACGCTC+TGG - chr4_2:13601237-13601256 Msa0590200:five_prime_UTR 45.0%
CAACCAGCTCACAGTGTAAC+TGG + chr4_2:13595435-13595454 None:intergenic 50.0%
CAGTTACACTGTGAGCTGGT+TGG - chr4_2:13595433-13595452 Msa0590200:three_prime_UTR 50.0%
!!! GCGTCATTTTGCTGTTTCGG+TGG + chr4_2:13595663-13595682 None:intergenic 50.0%
GCAGCTTTCTTCTGTCGAGA+AGG + chr4_2:13595783-13595802 None:intergenic 50.0%
GAAAGCTGCGCAACGATCTT+CGG - chr4_2:13595794-13595813 Msa0590200:intron 50.0%
TTTGCTTCATCGGCCGGAAA+AGG + chr4_2:13595855-13595874 None:intergenic 50.0%
CCGATGAAGCAAAAACCCGT+TGG - chr4_2:13595862-13595881 Msa0590200:intron 50.0%
TGTGCGCTTTGTAGTGGTTC+CGG - chr4_2:13595982-13596001 Msa0590200:intron 50.0%
AGCTCCAAAACAAAGGCCAG+TGG + chr4_2:13597425-13597444 None:intergenic 50.0%
GTAGCGAGACTTACAGGAAG+AGG + chr4_2:13598493-13598512 None:intergenic 50.0%
TCAAAGAAGGGGTTGAGTGC+AGG + chr4_2:13598526-13598545 None:intergenic 50.0%
CCACTAATCCCTTGACAAGG+GGG + chr4_2:13598645-13598664 None:intergenic 50.0%
! GAAATTCGCTGGTGGGTATC+TGG - chr4_2:13598794-13598813 Msa0590200:intron 50.0%
! AATTCGCTGGTGGGTATCTG+GGG - chr4_2:13598796-13598815 Msa0590200:intron 50.0%
! TATCTGGGGCGTTATGCTGT+AGG - chr4_2:13598810-13598829 Msa0590200:intron 50.0%
AGAATGGGAATGATGGCTGC+AGG - chr4_2:13598861-13598880 Msa0590200:CDS 50.0%
GAATGGGAATGATGGCTGCA+GGG - chr4_2:13598862-13598881 Msa0590200:CDS 50.0%
! AGCTATGGCTTTACCTGGGT+AGG + chr4_2:13598939-13598958 None:intergenic 50.0%
! GACTCTGAAAGTGCACCAAG+TGG - chr4_2:13599843-13599862 Msa0590200:intron 50.0%
GTGGTCTGCTGTATGATCAC+AGG - chr4_2:13599862-13599881 Msa0590200:intron 50.0%
GGCAAACTTCAGGGACCTAA+AGG - chr4_2:13600032-13600051 Msa0590200:intron 50.0%
! ACAGGCCATTTGGTCGACTT+TGG - chr4_2:13600343-13600362 Msa0590200:intron 50.0%
! GCCATTTGGTCGACTTTGGT+GGG - chr4_2:13600347-13600366 Msa0590200:intron 50.0%
TCCCACCAAAGTCGACCAAA+TGG + chr4_2:13600351-13600370 None:intergenic 50.0%
TTGTGTCCACAGTTGTGACC+CGG - chr4_2:13600376-13600395 Msa0590200:intron 50.0%
GAGGATAGCATGAGTGGCAT+TGG + chr4_2:13600459-13600478 None:intergenic 50.0%
TCGAGAGAATGCAAGGCTAC+AGG - chr4_2:13600750-13600769 Msa0590200:CDS 50.0%
CGAGAGAATGCAAGGCTACA+GGG - chr4_2:13600751-13600770 Msa0590200:CDS 50.0%
! AAATGCGGTTGCTGTTCCTG+TGG - chr4_2:13601188-13601207 Msa0590200:exon 50.0%
! AATGCGGTTGCTGTTCCTGT+GGG - chr4_2:13601189-13601208 Msa0590200:exon 50.0%
CTAAACCCAGTGTGTATCCG+AGG + chr4_2:13601221-13601240 None:intergenic 50.0%
AAAGGACGGGCAAGACAACT+TGG + chr4_2:13601297-13601316 None:intergenic 50.0%
GCAACAATGCCGCGTAAACG+TGG - chr4_2:13595630-13595649 Msa0590200:CDS 55.0%
GGTTGACGACCACGTTTACG+CGG + chr4_2:13595642-13595661 None:intergenic 55.0%
! CGGGTTTTTGCTTCATCGGC+CGG + chr4_2:13595861-13595880 None:intergenic 55.0%
CTCACGCGTTCTTGGCGTAA+CGG + chr4_2:13595893-13595912 None:intergenic 55.0%
!! GACTTTGAAGAGGTGGGCTG+TGG - chr4_2:13597559-13597578 Msa0590200:CDS 55.0%
!! TGCGAGGACTGGCTTCAATC+TGG - chr4_2:13598053-13598072 Msa0590200:CDS 55.0%
!! GCGAGGACTGGCTTCAATCT+GGG - chr4_2:13598054-13598073 Msa0590200:CDS 55.0%
CCCCCTTGTCAAGGGATTAG+TGG - chr4_2:13598642-13598661 Msa0590200:intron 55.0%
ATGATGGCTGCAGGGTCGTA+CGG - chr4_2:13598870-13598889 Msa0590200:CDS 55.0%
CGTACGGCCTTCCTCAGTTT+CGG - chr4_2:13598886-13598905 Msa0590200:CDS 55.0%
CACGCATCCGAAACTGAGGA+AGG + chr4_2:13598896-13598915 None:intergenic 55.0%
! GGCCATTTGGTCGACTTTGG+TGG - chr4_2:13600346-13600365 Msa0590200:intron 55.0%
CTTGCCCTCGGATACACACT+GGG - chr4_2:13601213-13601232 Msa0590200:five_prime_UTR 55.0%
AGCTGCGCAACGATCTTCGG+TGG - chr4_2:13595797-13595816 Msa0590200:intron 60.0%
TGGCGTAACGGTGAGGCCAA+CGG + chr4_2:13595881-13595900 None:intergenic 60.0%
GCGTTCTTGGCGTAACGGTG+AGG + chr4_2:13595888-13595907 None:intergenic 60.0%
GGGTGTGGAGCTATGTCCAC+TGG - chr4_2:13597406-13597425 Msa0590200:intron 60.0%
GGGAGCCAATTGAGGGCTTG+AGG - chr4_2:13598298-13598317 Msa0590200:intron 60.0%
!! TGTGGTGGACCCCCTTGTCA+AGG - chr4_2:13598633-13598652 Msa0590200:intron 60.0%
!! GTGGTGGACCCCCTTGTCAA+GGG - chr4_2:13598634-13598653 Msa0590200:intron 60.0%
TTGGGGAGCTCTTCCTACCC+AGG - chr4_2:13598923-13598942 Msa0590200:CDS 60.0%
CTTGCCCCAGCGTTGTACCT+GGG - chr4_2:13599272-13599291 Msa0590200:intron 60.0%
GTCACCCAGGTACAACGCTG+GGG + chr4_2:13599279-13599298 None:intergenic 60.0%
TTCTGGCCGGGTCACAACTG+TGG + chr4_2:13600385-13600404 None:intergenic 60.0%
! CTGGTTGTGAGGTTCTGGCC+GGG + chr4_2:13600397-13600416 None:intergenic 60.0%
! CCTGGTTGTGAGGTTCTGGC+CGG + chr4_2:13600398-13600417 None:intergenic 60.0%
CCAGTGTGTATCCGAGGGCA+AGG + chr4_2:13601215-13601234 None:intergenic 60.0%
CCTTGCCCTCGGATACACAC+TGG - chr4_2:13601212-13601231 Msa0590200:five_prime_UTR 60.0%
GGCGTAACGGTGAGGCCAAC+GGG + chr4_2:13595880-13595899 None:intergenic 65.0%
GCTTGCCCCAGCGTTGTACC+TGG - chr4_2:13599271-13599290 Msa0590200:intron 65.0%
CCGGCCAGAACCTCACAACC+AGG - chr4_2:13600395-13600414 Msa0590200:intron 65.0%
GTTCCTGTGGGCCTTGCCCT+CGG - chr4_2:13601201-13601220 Msa0590200:exon 65.0%
TATCCGAGGGCAAGGCCCAC+AGG + chr4_2:13601207-13601226 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 13595299 13601539 13595299 ID=Msa0590200;Name=Msa0590200
chr4_2 mRNA 13595299 13601539 13595299 ID=Msa0590200-mRNA-1;Parent=Msa0590200;Name=Msa0590200-mRNA-1;_AED=0.15;_eAED=0.15;_QI=337|1|1|1|1|1|20|192|850
chr4_2 exon 13595299 13595665 13595299 ID=Msa0590200-mRNA-1:exon:3989;Parent=Msa0590200-mRNA-1
chr4_2 exon 13596023 13596126 13596023 ID=Msa0590200-mRNA-1:exon:3988;Parent=Msa0590200-mRNA-1
chr4_2 exon 13596422 13596491 13596422 ID=Msa0590200-mRNA-1:exon:3987;Parent=Msa0590200-mRNA-1
chr4_2 exon 13596583 13596626 13596583 ID=Msa0590200-mRNA-1:exon:3986;Parent=Msa0590200-mRNA-1
chr4_2 exon 13596707 13596808 13596707 ID=Msa0590200-mRNA-1:exon:3985;Parent=Msa0590200-mRNA-1
chr4_2 exon 13596897 13597015 13596897 ID=Msa0590200-mRNA-1:exon:3984;Parent=Msa0590200-mRNA-1
chr4_2 exon 13597333 13597420 13597333 ID=Msa0590200-mRNA-1:exon:3983;Parent=Msa0590200-mRNA-1
chr4_2 exon 13597519 13597605 13597519 ID=Msa0590200-mRNA-1:exon:3982;Parent=Msa0590200-mRNA-1
chr4_2 exon 13597710 13597778 13597710 ID=Msa0590200-mRNA-1:exon:3981;Parent=Msa0590200-mRNA-1
chr4_2 exon 13597894 13598223 13597894 ID=Msa0590200-mRNA-1:exon:3980;Parent=Msa0590200-mRNA-1
chr4_2 exon 13598340 13598406 13598340 ID=Msa0590200-mRNA-1:exon:3979;Parent=Msa0590200-mRNA-1
chr4_2 exon 13598519 13598577 13598519 ID=Msa0590200-mRNA-1:exon:3978;Parent=Msa0590200-mRNA-1
chr4_2 exon 13598849 13599097 13598849 ID=Msa0590200-mRNA-1:exon:3977;Parent=Msa0590200-mRNA-1
chr4_2 exon 13599204 13599269 13599204 ID=Msa0590200-mRNA-1:exon:3976;Parent=Msa0590200-mRNA-1
chr4_2 exon 13599367 13599599 13599367 ID=Msa0590200-mRNA-1:exon:3975;Parent=Msa0590200-mRNA-1
chr4_2 exon 13599702 13599792 13599702 ID=Msa0590200-mRNA-1:exon:3974;Parent=Msa0590200-mRNA-1
chr4_2 exon 13599886 13600005 13599886 ID=Msa0590200-mRNA-1:exon:3973;Parent=Msa0590200-mRNA-1
chr4_2 exon 13600094 13600201 13600094 ID=Msa0590200-mRNA-1:exon:3972;Parent=Msa0590200-mRNA-1
chr4_2 exon 13600743 13600842 13600743 ID=Msa0590200-mRNA-1:exon:3971;Parent=Msa0590200-mRNA-1
chr4_2 exon 13600931 13601539 13600931 ID=Msa0590200-mRNA-1:exon:3970;Parent=Msa0590200-mRNA-1
chr4_2 five_prime_UTR 13601203 13601539 13601203 ID=Msa0590200-mRNA-1:five_prime_utr;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13600931 13601202 13600931 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13600743 13600842 13600743 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13600094 13600201 13600094 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13599886 13600005 13599886 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13599702 13599792 13599702 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13599367 13599599 13599367 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13599204 13599269 13599204 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13598849 13599097 13598849 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13598519 13598577 13598519 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13598340 13598406 13598340 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13597894 13598223 13597894 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13597710 13597778 13597710 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13597519 13597605 13597519 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13597333 13597420 13597333 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13596897 13597015 13596897 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13596707 13596808 13596707 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13596583 13596626 13596583 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13596422 13596491 13596422 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13596023 13596126 13596023 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 CDS 13595491 13595665 13595491 ID=Msa0590200-mRNA-1:cds;Parent=Msa0590200-mRNA-1
chr4_2 three_prime_UTR 13595299 13595490 13595299 ID=Msa0590200-mRNA-1:three_prime_utr;Parent=Msa0590200-mRNA-1
Gene Sequence

>Msa0590200

ATGCCGCGTAAACGTGGTCGTCAACCACCGAAACAGCAAAATGACGCCGTCGTTAAACGTTCTACTCAACGAAAGAAACCTAAGAAATCTCCGGTAAAAGAAATCGTCGAAGAAGAAGAACTGGTTACACTTCTTCCGTCACTTCCTTCTCGACAGAAGAAAGCTGCGCAACGATCTTCGGTGGTTAACGACGACGATTCATTTTTTGTCGGAGAACCTTTTCCGGCCGATGAAGCAAAAACCCGTTGGCCTCACCGTTACGCCAAGAACGCTGGTTCCGGAGACGATGATAAAGTGAAGGCGAAGTTTCATTACCGTGAAGTGAATGTTGATGGGGTCATATATAAGCTGGATGATAATGCTTATGTCAAGGGAGAAGAGGGTCAAAAAGACTATATTGCTGCAATTGTGGAATTGTTTGAAACACCTGAAAAAGAATACTATTTTACTGCTCAGTGGTTTTACAGAGCCGAAGATACGGTTATCAAGAACCATGGGGATCTCGTTGATGAAAAGAGGATTTTTAAATCTGATGTGAAAGATGAAAACCCTCTTGATTGTTTAGTTAAGAAAGTAAACATTGTACAAATTTCTCCTGATGATGCTAAAAAGAAGAATGTTCCTCCTTGTGATCTATATTATGATATGAAGTACACTTTGCCATATCTAACTTTTTCAAACATTGACAATGAACCTTCCAGAATAGAAAGCGAGACTGCTAGAATAGAAAGCGAGACTTCTACAATTTCAAGTGAATCTGGGTCCAACGCCTGTGCAAGTGATAATAATGTGGCTGAAGAAGGATTGTCTAAAATTAAAGAATCTGATAGGGAGTGGACTTTATTAGATTTGTATTCTGGGTGTGGAGCTATGTCCACTGGCCTTTGTTTTGGAGCTTCTATTGCTGACATTAAGCTTGTCACGAGGTGGGCTGTGGATACAAATGAATATGCATGTCAGAGTCTAAAGCTGAATCATCCTGAAACTCATGTGAGGAATGAGACAGCTGAAGACTTTTTATCTCTTTTAAAAGAGTGGTTTAAATTGTGTGAGAAGTTTGTTCTGAATGGAACAGAAAATATAGATTCTGATTTGAATGCTTGTGAAGAGGCTGGTGAAGAAGCTGATGATGAAGCAATGGATAGTTCATCTGACTCTGAGGTATTTGAGGTTGAAAGACTACTCTCTGTATGCTATGGTGATCCCAACGAAGATGAAAAACTAGGACTGTATTTCAAAGTGCAGTGGAAGGGTTATGACTCCAGTTATGATACATGGGAGCCAATTGAGGGCTTGAGCAATTGTAAAGAGGCTATGAAAGAATTTGTCACTAAAGGATATGAGGATAAGATATTGCCTCTTCCTGGTCAAGCTGATTTCATTTGTGGTGGACCCCCTTGTCAAGGGATTAGTGGTTTCAATCGCTTTAGGAACAAAAATGCTCCTATGGATGACATAAAAAATAAGCAATTATTGGTCTACATGAATATTATTGAATTTTTGAAGCCTAAATATATATTGATGGAGAATGTTGTTGACATTTTGAAATTCGCTGGTGGGTATCTGGGGCGTTATGCTGTAGGACGTCTAGTGGCCATGCATTATCAAGCTAGAATGGGAATGATGGCTGCAGGGTCGTACGGCCTTCCTCAGTTTCGGATGCGTGTTTTTCTTTGGGGAGCTCTTCCTACCCAGAATTTACCTTCATATCCGCTACCAACTCATGAGGTTGAATCGAGATCTGTTCTTACCACGGAGTTTGAAGAAATTACGGTAGCATATACTACTAATGAAAAGTGTCAGCTTGCCCCAGCGTTGTACCTGGGTGACGCAATTGATGACCTCCCTCCAGTTGAAAATGATGACAGTGATGATGAAAAGAGTTATGGGACCACTCCTCATACTGATTTTCAGAGATATATCAGATTAAAGAGAAGTGAGATGGTGAATTACACAGCTGACTCTGAAAGTGCACCAAGTGGTCTGCTGTATGATCACAGGCCATATAAGTTAAATAACGATGACTATGAGAGAGTTTGCCTCATTCCAAAGAAGAAGGGGGCAAACTTCAGGGACCTAAAGGGTGTGCTTGTTAATAAGAATAAAGTGGAGTTGGACCCCTCTGTTGAAAGAGTGTATCTGAAATCTGGGAAGCCTTTGGTCCCGGATTATGCGATGAAATTTGTCCGTGGTACTTCCTCTAAGCCATTTGGTCGACTTTGGTGGGACGAAATTGTGTCCACAGTTGTGACCCGGCCAGAACCTCACAACCAGGTTCTTATCCATCCAAAGCAAGACAGAGTTCTTACCATTCGAGAGAATGCAAGGCTACAGGGATTTCCAGATTGCTATAAACTTTGTGGCCCTATAAAAGAAAGGTACATACAAGTTGGAAATGCGGTTGCTGTTCCTGTGGGCCTTGCCCTCGGATACACACTGGGTTTAGCAATTCAAGGACGCTCTGGTGATAATCCTTTGACAACTCTCCCCTTTAAGTATCCAAGTTGTCTTGCCCGTCCTTTAGCTATAGTTGATGATGATGGTTCAAGTTGA
Protein sequence

>Msa0590200

MPRKRGRQPPKQQNDAVVKRSTQRKKPKKSPVKEIVEEEELVTLLPSLPSRQKKAAQRSSVVNDDDSFFVGEPFPADEAKTRWPHRYAKNAGSGDDDKVKAKFHYREVNVDGVIYKLDDNAYVKGEEGQKDYIAAIVELFETPEKEYYFTAQWFYRAEDTVIKNHGDLVDEKRIFKSDVKDENPLDCLVKKVNIVQISPDDAKKKNVPPCDLYYDMKYTLPYLTFSNIDNEPSRIESETARIESETSTISSESGSNACASDNNVAEEGLSKIKESDREWTLLDLYSGCGAMSTGLCFGASIADIKLVTRWAVDTNEYACQSLKLNHPETHVRNETAEDFLSLLKEWFKLCEKFVLNGTENIDSDLNACEEAGEEADDEAMDSSSDSEVFEVERLLSVCYGDPNEDEKLGLYFKVQWKGYDSSYDTWEPIEGLSNCKEAMKEFVTKGYEDKILPLPGQADFICGGPPCQGISGFNRFRNKNAPMDDIKNKQLLVYMNIIEFLKPKYILMENVVDILKFAGGYLGRYAVGRLVAMHYQARMGMMAAGSYGLPQFRMRVFLWGALPTQNLPSYPLPTHEVESRSVLTTEFEEITVAYTTNEKCQLAPALYLGDAIDDLPPVENDDSDDEKSYGTTPHTDFQRYIRLKRSEMVNYTADSESAPSGLLYDHRPYKLNNDDYERVCLIPKKKGANFRDLKGVLVNKNKVELDPSVERVYLKSGKPLVPDYAMKFVRGTSSKPFGRLWWDEIVSTVVTRPEPHNQVLIHPKQDRVLTIRENARLQGFPDCYKLCGPIKERYIQVGNAVAVPVGLALGYTLGLAIQGRSGDNPLTTLPFKYPSCLARPLAIVDDDGSS*