Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281350 | XP_013463255.1 | 90.667 | 300 | 16 | 3 | 1 | 293 | 1 | 295 | 6.60e-168 | 477 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281350 | sp|Q84J88|HIP36_ARATH | 51.613 | 93 | 41 | 1 | 10 | 98 | 25 | 117 | 1.44e-27 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002580 | Msa0281350 | 0.803338 | 3.656473e-49 | -8.615850e-47 |
| Msa0005890 | Msa0281350 | 0.812487 | 4.136535e-51 | -8.615850e-47 |
| Msa0018160 | Msa0281350 | 0.803894 | 2.803288e-49 | -8.615850e-47 |
| Msa0028420 | Msa0281350 | 0.811531 | 6.682866e-51 | -8.615850e-47 |
| Msa0052260 | Msa0281350 | 0.818784 | 1.635970e-52 | -8.615850e-47 |
| Msa0071880 | Msa0281350 | 0.803061 | 4.173164e-49 | -8.615850e-47 |
| Msa0090400 | Msa0281350 | 0.820067 | 8.344421e-53 | -8.615850e-47 |
| Msa0117480 | Msa0281350 | 0.802840 | 4.635871e-49 | -8.615850e-47 |
| Msa0124280 | Msa0281350 | 0.815265 | 1.010055e-51 | -8.615850e-47 |
| Msa0137880 | Msa0281350 | 0.822338 | 2.499261e-53 | -8.615850e-47 |
| Msa0146040 | Msa0281350 | 0.804298 | 2.309786e-49 | -8.615850e-47 |
| Msa0167520 | Msa0281350 | 0.807320 | 5.354489e-50 | -8.615850e-47 |
| Msa0225100 | Msa0281350 | 0.806208 | 9.195383e-50 | -8.615850e-47 |
| Msa0225860 | Msa0281350 | 0.808697 | 2.726479e-50 | -8.615850e-47 |
| Msa0267110 | Msa0281350 | 0.820777 | 5.733109e-53 | -8.615850e-47 |
| Msa0281350 | Msa0281390 | 0.961881 | 3.217169e-120 | -8.615850e-47 |
| Msa0281350 | Msa0292400 | 0.805165 | 1.522517e-49 | -8.615850e-47 |
| Msa0281350 | Msa0320660 | 0.878813 | 2.072696e-69 | -8.615850e-47 |
| Msa0281350 | Msa0378720 | 0.813573 | 2.390837e-51 | -8.615850e-47 |
| Msa0281350 | Msa0436910 | 0.803115 | 4.066611e-49 | -8.615850e-47 |
| Msa0281350 | Msa0474730 | 0.816091 | 6.611299e-52 | -8.615850e-47 |
| Msa0281350 | Msa0530780 | 0.807377 | 5.207265e-50 | -8.615850e-47 |
| Msa0281350 | Msa0587620 | 0.802134 | 6.478322e-49 | -8.615850e-47 |
| Msa0281350 | Msa0730430 | 0.817647 | 2.957913e-52 | -8.615850e-47 |
| Msa0281350 | Msa0829300 | 0.808937 | 2.423115e-50 | -8.615850e-47 |
| Msa0281350 | Msa0829330 | 0.817774 | 2.769312e-52 | -8.615850e-47 |
| Msa0281350 | Msa0835490 | 0.813726 | 2.212324e-51 | -8.615850e-47 |
| Msa0281350 | Msa0945110 | 0.816039 | 6.792536e-52 | -8.615850e-47 |
| Msa0281350 | Msa1004840 | 0.804473 | 2.124213e-49 | -8.615850e-47 |
| Msa0281350 | Msa1045140 | 0.803606 | 3.217232e-49 | -8.615850e-47 |
| Msa0281350 | Msa1209460 | 0.818013 | 2.446313e-52 | -8.615850e-47 |
| Msa0281350 | Msa1265650 | 0.804045 | 2.608041e-49 | -8.615850e-47 |
| Msa0281350 | Msa1297230 | 0.816445 | 5.508954e-52 | -8.615850e-47 |
| Msa0281350 | Msa1303650 | 0.801760 | 7.735023e-49 | -8.615850e-47 |
| Msa0281350 | Msa1343430 | 0.814349 | 1.612024e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281350 | MtrunA17_Chr2g0296001 | 90.667 | 300 | 16 | 3 | 1 | 293 | 59 | 353 | 2.56e-171 | 478 |
| Msa0281350 | MtrunA17_Chr4g0067291 | 52.322 | 323 | 96 | 15 | 1 | 293 | 64 | 358 | 1.55e-85 | 260 |
| Msa0281350 | MtrunA17_Chr7g0269081 | 43.902 | 123 | 65 | 1 | 2 | 120 | 9 | 131 | 6.89e-23 | 95.9 |
| Msa0281350 | MtrunA17_Chr1g0208301 | 58.824 | 68 | 24 | 1 | 12 | 75 | 10 | 77 | 1.90e-21 | 92.8 |
| Msa0281350 | MtrunA17_Chr2g0287751 | 55.714 | 70 | 27 | 1 | 10 | 75 | 5 | 74 | 6.77e-20 | 89.4 |
| Msa0281350 | MtrunA17_Chr4g0065651 | 55.714 | 70 | 27 | 1 | 10 | 75 | 5 | 74 | 2.02e-19 | 88.2 |
| Msa0281350 | MtrunA17_Chr0c22g0493881 | 55.714 | 70 | 27 | 1 | 10 | 75 | 5 | 74 | 2.10e-19 | 87.0 |
| Msa0281350 | MtrunA17_Chr4g0065621 | 55.714 | 70 | 27 | 1 | 10 | 75 | 5 | 74 | 1.68e-18 | 84.7 |
| Msa0281350 | MtrunA17_Chr1g0191671 | 52.941 | 68 | 28 | 1 | 12 | 75 | 7 | 74 | 2.97e-17 | 81.6 |
| Msa0281350 | MtrunA17_Chr1g0192131 | 48.780 | 82 | 37 | 2 | 1 | 77 | 1 | 82 | 4.42e-17 | 80.9 |
| Msa0281350 | MtrunA17_Chr3g0111541 | 48.000 | 75 | 35 | 1 | 10 | 80 | 7 | 81 | 4.79e-16 | 75.5 |
| Msa0281350 | MtrunA17_Chr5g0421601 | 50.000 | 70 | 31 | 2 | 224 | 293 | 51 | 116 | 4.62e-12 | 63.5 |
| Msa0281350 | MtrunA17_Chr2g0287741 | 54.839 | 62 | 24 | 1 | 18 | 75 | 18 | 79 | 6.00e-12 | 65.9 |
| Msa0281350 | MtrunA17_Chr3g0124411 | 50.000 | 68 | 30 | 1 | 13 | 76 | 28 | 95 | 6.80e-12 | 62.4 |
| Msa0281350 | MtrunA17_Chr7g0218981 | 33.333 | 129 | 69 | 4 | 15 | 132 | 4 | 126 | 1.84e-11 | 60.5 |
| Msa0281350 | MtrunA17_Chr8g0382721 | 51.613 | 62 | 26 | 1 | 19 | 76 | 33 | 94 | 3.35e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281350 | AT5G27690.1 | 51.613 | 93 | 41 | 1 | 10 | 98 | 25 | 117 | 1.46e-28 | 112 |
| Msa0281350 | AT1G56210.1 | 30.931 | 333 | 170 | 9 | 14 | 293 | 39 | 364 | 4.85e-21 | 92.0 |
| Msa0281350 | AT3G06130.2 | 58.571 | 70 | 25 | 1 | 10 | 75 | 5 | 74 | 2.71e-20 | 89.7 |
| Msa0281350 | AT1G23000.1 | 57.746 | 71 | 26 | 1 | 12 | 78 | 10 | 80 | 3.34e-20 | 89.7 |
| Msa0281350 | AT3G06130.1 | 58.571 | 70 | 25 | 1 | 10 | 75 | 5 | 74 | 3.97e-20 | 90.5 |
| Msa0281350 | AT1G23000.2 | 54.217 | 83 | 31 | 2 | 3 | 78 | 58 | 140 | 6.44e-20 | 89.4 |
| Msa0281350 | AT5G19090.2 | 57.143 | 70 | 26 | 1 | 10 | 75 | 5 | 74 | 9.08e-20 | 89.4 |
| Msa0281350 | AT5G19090.3 | 57.143 | 70 | 26 | 1 | 10 | 75 | 5 | 74 | 9.08e-20 | 89.4 |
| Msa0281350 | AT5G19090.5 | 57.143 | 70 | 26 | 1 | 10 | 75 | 5 | 74 | 1.35e-19 | 89.4 |
| Msa0281350 | AT5G19090.4 | 57.143 | 70 | 26 | 1 | 10 | 75 | 5 | 74 | 1.35e-19 | 89.4 |
| Msa0281350 | AT5G19090.1 | 57.143 | 70 | 26 | 1 | 10 | 75 | 5 | 74 | 1.35e-19 | 89.4 |
| Msa0281350 | AT3G05220.1 | 52.941 | 68 | 28 | 1 | 12 | 75 | 7 | 74 | 1.16e-15 | 77.4 |
| Msa0281350 | AT5G37860.1 | 48.571 | 70 | 30 | 2 | 10 | 75 | 7 | 74 | 1.08e-14 | 72.8 |
| Msa0281350 | AT3G56891.1 | 33.684 | 95 | 59 | 1 | 19 | 109 | 20 | 114 | 7.06e-11 | 60.5 |
Find 84 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGACCAGCTTCCTTAAA+AGG | 0.155110 | 2_3:+16741528 | None:intergenic |
| TGCAAGCTTTGTGCTTCTTT+TGG | 0.232522 | 2_3:+16741413 | None:intergenic |
| TCTGACCAAGATTCTGAAAT+TGG | 0.246160 | 2_3:+16741129 | None:intergenic |
| CCTAGCTTTGTTGATCAATA+TGG | 0.246316 | 2_3:-16740930 | Msa0281350:CDS |
| TTCAGAACCTTTCAAGTATC+AGG | 0.278855 | 2_3:-16741936 | Msa0281350:intron |
| AGAGAGGGAAGTGGAATTGA+AGG | 0.295292 | 2_3:+16741985 | None:intergenic |
| TGATCAATATGGTACTTATC+AGG | 0.301999 | 2_3:-16740919 | Msa0281350:CDS |
| GGATTCCAATTTCAGAATCT+TGG | 0.332701 | 2_3:-16741134 | Msa0281350:CDS |
| TCTTCACAATCCTCACATAA+TGG | 0.352946 | 2_3:+16740836 | None:intergenic |
| TTCCACTTCCCTCTCTCTAA+TGG | 0.355038 | 2_3:-16741978 | Msa0281350:exon |
| TCAGAATCTTGGTCAGACTA+TGG | 0.358813 | 2_3:-16741123 | Msa0281350:CDS |
| TATACTCCCAAGTACATTCT+TGG | 0.381032 | 2_3:-16742085 | None:intergenic |
| CTGGAAAGTACGCTGAGATT+TGG | 0.402278 | 2_3:-16741505 | Msa0281350:CDS |
| AAAGATGGGTGTAGTGGAAA+TGG | 0.408222 | 2_3:-16741224 | Msa0281350:CDS |
| CCCTTCCCGTCAAGATTCTC+CGG | 0.414067 | 2_3:+16741482 | None:intergenic |
| TTTAGTGATGAAAATGCTAA+TGG | 0.427020 | 2_3:-16740864 | Msa0281350:CDS |
| GGAAATGGAAATGGAAATGA+TGG | 0.428718 | 2_3:-16741203 | Msa0281350:CDS |
| ATCTTGTATCCATCAGAAAC+TGG | 0.429484 | 2_3:-16741062 | Msa0281350:CDS |
| AACTGGTTGTTACCCTTCAA+TGG | 0.433910 | 2_3:-16741045 | Msa0281350:CDS |
| TTACAATAGATTGTATCCTA+TGG | 0.442494 | 2_3:-16741006 | Msa0281350:CDS |
| GGTACTTATCAGGTTCAATC+TGG | 0.444832 | 2_3:-16740909 | Msa0281350:CDS |
| TCATCACTAAATAGCTCAAA+AGG | 0.452027 | 2_3:+16740876 | None:intergenic |
| GAGAGGGAAGTGGAATTGAA+GGG | 0.461475 | 2_3:+16741986 | None:intergenic |
| TTAAGGAAGCTGGTCAAAGC+TGG | 0.463380 | 2_3:-16741524 | Msa0281350:CDS |
| GAAAATGCCAAGAATGTACT+TGG | 0.472077 | 2_3:+16742078 | None:intergenic |
| TTTGACCAGCTTCCTTAAAA+GGG | 0.472837 | 2_3:+16741529 | None:intergenic |
| GGGTGTAGTGGAAATGGAAA+TGG | 0.474373 | 2_3:-16741218 | Msa0281350:CDS |
| AACTGACGCCGGAGAGTCGC+CGG | 0.475090 | 2_3:-16741324 | Msa0281350:CDS |
| AGTGGAAATGGAAATGGAAA+TGG | 0.477221 | 2_3:-16741212 | Msa0281350:CDS |
| AGCACAAAGCTTGCAAAACA+AGG | 0.487035 | 2_3:-16741405 | Msa0281350:CDS |
| AAATAGAGAGTGAGTGAATG+TGG | 0.492826 | 2_3:+16742034 | None:intergenic |
| TACTTGAAAGGTTCTGAAGA+GGG | 0.497052 | 2_3:+16741941 | None:intergenic |
| GAAGATGGAACATGATAAGA+AGG | 0.504811 | 2_3:+16740969 | None:intergenic |
| TAGGGCTGAGATTCACTTGG+TGG | 0.512971 | 2_3:+16741099 | None:intergenic |
| GTTCCTCCGGTGAGTGGTGG+AGG | 0.522411 | 2_3:-16741278 | Msa0281350:CDS |
| TCAGGTTCAATCTGGACCGT+TGG | 0.523566 | 2_3:-16740901 | Msa0281350:CDS |
| TACAATAGATTGTATCCTAT+GGG | 0.525366 | 2_3:-16741005 | Msa0281350:CDS |
| AATTGGAATCCACTGTGTGC+TGG | 0.529577 | 2_3:+16741146 | None:intergenic |
| AAGATTGATTGCTGACGTGT+AGG | 0.532112 | 2_3:+16741080 | None:intergenic |
| GTTACCAAGTATGAAAATGA+AGG | 0.532221 | 2_3:-16741371 | Msa0281350:CDS |
| ATTTGGCCGGAGAATCTTGA+CGG | 0.534632 | 2_3:-16741488 | Msa0281350:CDS |
| CCATATTGATCAACAAAGCT+AGG | 0.542434 | 2_3:+16740930 | None:intergenic |
| AGATTGATTGCTGACGTGTA+GGG | 0.544485 | 2_3:+16741081 | None:intergenic |
| GATGACATATAAACCATTGA+AGG | 0.546888 | 2_3:+16741032 | None:intergenic |
| ATTAGTACCTGATACTTGAA+AGG | 0.547845 | 2_3:+16741929 | None:intergenic |
| AATAGAGAGTGAGTGAATGT+GGG | 0.548933 | 2_3:+16742035 | None:intergenic |
| GCCGGAGAATCTTGACGGGA+AGG | 0.553950 | 2_3:-16741483 | Msa0281350:CDS |
| GGACACGTGTAGGGTGAAGA+TGG | 0.555418 | 2_3:+16740954 | None:intergenic |
| GGACGGTAACCATGTTCCTC+CGG | 0.558194 | 2_3:-16741291 | Msa0281350:CDS |
| GGGTAACAACCAGTTTCTGA+TGG | 0.562603 | 2_3:+16741053 | None:intergenic |
| CCGGAGAATCTTGACGGGAA+GGG | 0.563881 | 2_3:-16741482 | Msa0281350:CDS |
| TTTGGCCGGAGAATCTTGAC+GGG | 0.565237 | 2_3:-16741487 | Msa0281350:CDS |
| CATGTTCCTCCGGTGAGTGG+TGG | 0.568406 | 2_3:-16741281 | Msa0281350:CDS |
| AACCATGTTCCTCCGGTGAG+TGG | 0.571405 | 2_3:-16741284 | Msa0281350:CDS |
| AAAGTTTCTATCCACTGTGA+AGG | 0.572186 | 2_3:-16741771 | Msa0281350:CDS |
| CCTCCGGTGAGTGGTGGAGG+TGG | 0.575221 | 2_3:-16741275 | Msa0281350:CDS |
| TTGTATCCTATGGGAAGAGT+TGG | 0.576482 | 2_3:-16740996 | Msa0281350:CDS |
| CACCACTCACCGGAGGAACA+TGG | 0.583260 | 2_3:+16741282 | None:intergenic |
| AAAGTACGCTGAGATTTGGC+CGG | 0.585267 | 2_3:-16741501 | Msa0281350:CDS |
| AAGCTAGGAGGACACGTGTA+GGG | 0.590451 | 2_3:+16740945 | None:intergenic |
| ATACTTGAAAGGTTCTGAAG+AGG | 0.593767 | 2_3:+16741940 | None:intergenic |
| AGAGTCGCCGGAAAAGTCAC+CGG | 0.595041 | 2_3:-16741312 | Msa0281350:CDS |
| AAAGCTAGGAGGACACGTGT+AGG | 0.607435 | 2_3:+16740944 | None:intergenic |
| AGGGCTGAGATTCACTTGGT+GGG | 0.607822 | 2_3:+16741100 | None:intergenic |
| GGATCACCAACTCTTCCCAT+AGG | 0.609702 | 2_3:+16740990 | None:intergenic |
| GAACCACCTCCACCACTCAC+CGG | 0.609920 | 2_3:+16741272 | None:intergenic |
| ATAGAGAGTGAGTGAATGTG+GGG | 0.612267 | 2_3:+16742036 | None:intergenic |
| ATGACATATAAACCATTGAA+GGG | 0.618297 | 2_3:+16741033 | None:intergenic |
| GGAGGAACATGGTTACCGTC+CGG | 0.626369 | 2_3:+16741293 | None:intergenic |
| ATCCATTAGAGAGAGGGAAG+TGG | 0.627602 | 2_3:+16741976 | None:intergenic |
| GGGGCTTAATGAGAAAAGAA+GGG | 0.628819 | 2_3:+16742056 | None:intergenic |
| AATGGAAATGATGGAAGTGA+TGG | 0.633579 | 2_3:-16741194 | Msa0281350:CDS |
| TTGACTACAGTAGCTAAGAG+TGG | 0.651669 | 2_3:-16741170 | Msa0281350:CDS |
| GCACAAAGCTTGCAAAACAA+GGG | 0.661538 | 2_3:-16741404 | Msa0281350:CDS |
| AATAGCTCAAAAGGAACCAA+CGG | 0.664852 | 2_3:+16740885 | None:intergenic |
| AAAATGCCAAGAATGTACTT+GGG | 0.667143 | 2_3:+16742079 | None:intergenic |
| CCACCTCCACCACTCACCGG+AGG | 0.681711 | 2_3:+16741275 | None:intergenic |
| AATGGATGTTCCATTATGTG+AGG | 0.691882 | 2_3:-16740846 | None:intergenic |
| TAGAGAGTGAGTGAATGTGG+GGG | 0.693450 | 2_3:+16742037 | None:intergenic |
| TATTGATCAACAAAGCTAGG+AGG | 0.694963 | 2_3:+16740933 | None:intergenic |
| TCGCCGGAAAAGTCACCGGA+CGG | 0.698926 | 2_3:-16741308 | Msa0281350:CDS |
| TCTTTCTGCAACCTTCACAG+TGG | 0.706869 | 2_3:+16741760 | None:intergenic |
| GTGTAGGGCTGAGATTCACT+TGG | 0.708981 | 2_3:+16741096 | None:intergenic |
| AAGAGTGGACCAGCACACAG+TGG | 0.728445 | 2_3:-16741155 | Msa0281350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAGAAAACAAAGTTAGAAG+AGG | + | chr2_3:16741106-16741125 | None:intergenic | 25.0% |
| !! | TCTTATGATATTTTCAGACA+TGG | - | chr2_3:16741127-16741146 | Msa0281350:CDS | 25.0% |
| !! | TTTACCTTCATTTTCATACT+TGG | + | chr2_3:16741563-16741582 | None:intergenic | 25.0% |
| ! | AAGAAGAAGAAAAAGAAAGA+TGG | - | chr2_3:16741688-16741707 | Msa0281350:intron | 25.0% |
| ! | AGAAGAAGAAAAAGAAAGAT+GGG | - | chr2_3:16741689-16741708 | Msa0281350:intron | 25.0% |
| ! | ATGACATATAAACCATTGAA+GGG | + | chr2_3:16741897-16741916 | None:intergenic | 25.0% |
| ! | TTACAATAGATTGTATCCTA+TGG | - | chr2_3:16741921-16741940 | Msa0281350:intron | 25.0% |
| ! | TACAATAGATTGTATCCTAT+GGG | - | chr2_3:16741922-16741941 | Msa0281350:intron | 25.0% |
| ! | TTTAGTGATGAAAATGCTAA+TGG | - | chr2_3:16742063-16742082 | Msa0281350:five_prime_UTR | 25.0% |
| ! | AAAGAAAACAAAGTTAGAAG+AGG | + | chr2_3:16741106-16741125 | None:intergenic | 25.0% |
| !! | TCTTATGATATTTTCAGACA+TGG | - | chr2_3:16741127-16741146 | Msa0281350:CDS | 25.0% |
| !! | TTTACCTTCATTTTCATACT+TGG | + | chr2_3:16741563-16741582 | None:intergenic | 25.0% |
| ! | AAGAAGAAGAAAAAGAAAGA+TGG | - | chr2_3:16741688-16741707 | Msa0281350:intron | 25.0% |
| ! | AGAAGAAGAAAAAGAAAGAT+GGG | - | chr2_3:16741689-16741708 | Msa0281350:intron | 25.0% |
| ! | ATGACATATAAACCATTGAA+GGG | + | chr2_3:16741897-16741916 | None:intergenic | 25.0% |
| ! | TTACAATAGATTGTATCCTA+TGG | - | chr2_3:16741921-16741940 | Msa0281350:intron | 25.0% |
| ! | TACAATAGATTGTATCCTAT+GGG | - | chr2_3:16741922-16741941 | Msa0281350:intron | 25.0% |
| ! | TTTAGTGATGAAAATGCTAA+TGG | - | chr2_3:16742063-16742082 | Msa0281350:five_prime_UTR | 25.0% |
| AAAATGCCAAGAATGTACTT+GGG | + | chr2_3:16740851-16740870 | None:intergenic | 30.0% | |
| ATTAGTACCTGATACTTGAA+AGG | + | chr2_3:16741001-16741020 | None:intergenic | 30.0% | |
| GTGTGTGTAACATTTCATAA+GGG | + | chr2_3:16741046-16741065 | None:intergenic | 30.0% | |
| TGTGTGTGTAACATTTCATA+AGG | + | chr2_3:16741047-16741066 | None:intergenic | 30.0% | |
| CACACATTTATGCTTTATAG+TGG | - | chr2_3:16741061-16741080 | Msa0281350:CDS | 30.0% | |
| TTTACCATGCATAACTATGA+AGG | - | chr2_3:16741308-16741327 | Msa0281350:CDS | 30.0% | |
| CAACAAAAAGTAACAGTAAC+TGG | - | chr2_3:16741359-16741378 | Msa0281350:CDS | 30.0% | |
| CAAAGAGAAGAAAAAGAAGA+AGG | - | chr2_3:16741480-16741499 | Msa0281350:CDS | 30.0% | |
| GTTACCAAGTATGAAAATGA+AGG | - | chr2_3:16741556-16741575 | Msa0281350:intron | 30.0% | |
| GATGACATATAAACCATTGA+AGG | + | chr2_3:16741898-16741917 | None:intergenic | 30.0% | |
| TGATCAATATGGTACTTATC+AGG | - | chr2_3:16742008-16742027 | Msa0281350:five_prime_UTR | 30.0% | |
| TCATCACTAAATAGCTCAAA+AGG | + | chr2_3:16742054-16742073 | None:intergenic | 30.0% | |
| AAAATGCCAAGAATGTACTT+GGG | + | chr2_3:16740851-16740870 | None:intergenic | 30.0% | |
| ATTAGTACCTGATACTTGAA+AGG | + | chr2_3:16741001-16741020 | None:intergenic | 30.0% | |
| GTGTGTGTAACATTTCATAA+GGG | + | chr2_3:16741046-16741065 | None:intergenic | 30.0% | |
| TGTGTGTGTAACATTTCATA+AGG | + | chr2_3:16741047-16741066 | None:intergenic | 30.0% | |
| CACACATTTATGCTTTATAG+TGG | - | chr2_3:16741061-16741080 | Msa0281350:CDS | 30.0% | |
| TTTACCATGCATAACTATGA+AGG | - | chr2_3:16741308-16741327 | Msa0281350:CDS | 30.0% | |
| CAACAAAAAGTAACAGTAAC+TGG | - | chr2_3:16741359-16741378 | Msa0281350:CDS | 30.0% | |
| CAAAGAGAAGAAAAAGAAGA+AGG | - | chr2_3:16741480-16741499 | Msa0281350:CDS | 30.0% | |
| GTTACCAAGTATGAAAATGA+AGG | - | chr2_3:16741556-16741575 | Msa0281350:intron | 30.0% | |
| GATGACATATAAACCATTGA+AGG | + | chr2_3:16741898-16741917 | None:intergenic | 30.0% | |
| TGATCAATATGGTACTTATC+AGG | - | chr2_3:16742008-16742027 | Msa0281350:five_prime_UTR | 30.0% | |
| TCATCACTAAATAGCTCAAA+AGG | + | chr2_3:16742054-16742073 | None:intergenic | 30.0% | |
| GAAAATGCCAAGAATGTACT+TGG | + | chr2_3:16740852-16740871 | None:intergenic | 35.0% | |
| AATAGAGAGTGAGTGAATGT+GGG | + | chr2_3:16740895-16740914 | None:intergenic | 35.0% | |
| AAATAGAGAGTGAGTGAATG+TGG | + | chr2_3:16740896-16740915 | None:intergenic | 35.0% | |
| ! | TTTTGCATCCATTAGAGAGA+GGG | + | chr2_3:16740960-16740979 | None:intergenic | 35.0% |
| !! | TACTTGAAAGGTTCTGAAGA+GGG | + | chr2_3:16740989-16741008 | None:intergenic | 35.0% |
| !! | ATACTTGAAAGGTTCTGAAG+AGG | + | chr2_3:16740990-16741009 | None:intergenic | 35.0% |
| ! | TTCAGAACCTTTCAAGTATC+AGG | - | chr2_3:16740991-16741010 | Msa0281350:CDS | 35.0% |
| AAAGTTTCTATCCACTGTGA+AGG | - | chr2_3:16741156-16741175 | Msa0281350:CDS | 35.0% | |
| !!! | AAAGTTTTGAAGCGCATTGA+TGG | - | chr2_3:16741198-16741217 | Msa0281350:CDS | 35.0% |
| AACACCTTCATAGTTATGCA+TGG | + | chr2_3:16741315-16741334 | None:intergenic | 35.0% | |
| TTTGACCAGCTTCCTTAAAA+GGG | + | chr2_3:16741401-16741420 | None:intergenic | 35.0% | |
| ! | CTTCTTTTTCTTCTCTTTGC+CGG | + | chr2_3:16741479-16741498 | None:intergenic | 35.0% |
| AAAAAGTCAAAAACTGACGC+CGG | - | chr2_3:16741592-16741611 | Msa0281350:CDS | 35.0% | |
| AAAAAGAAAGATGGGTGTAG+TGG | - | chr2_3:16741697-16741716 | Msa0281350:intron | 35.0% | |
| AGTGGAAATGGAAATGGAAA+TGG | - | chr2_3:16741715-16741734 | Msa0281350:intron | 35.0% | |
| GGAAATGGAAATGGAAATGA+TGG | - | chr2_3:16741724-16741743 | Msa0281350:intron | 35.0% | |
| ! | AATGGAAATGATGGAAGTGA+TGG | - | chr2_3:16741733-16741752 | Msa0281350:CDS | 35.0% |
| GGATTCCAATTTCAGAATCT+TGG | - | chr2_3:16741793-16741812 | Msa0281350:intron | 35.0% | |
| !! | TCTGACCAAGATTCTGAAAT+TGG | + | chr2_3:16741801-16741820 | None:intergenic | 35.0% |
| ATCTTGTATCCATCAGAAAC+TGG | - | chr2_3:16741865-16741884 | Msa0281350:intron | 35.0% | |
| GAAGATGGAACATGATAAGA+AGG | + | chr2_3:16741961-16741980 | None:intergenic | 35.0% | |
| TATTGATCAACAAAGCTAGG+AGG | + | chr2_3:16741997-16742016 | None:intergenic | 35.0% | |
| CCATATTGATCAACAAAGCT+AGG | + | chr2_3:16742000-16742019 | None:intergenic | 35.0% | |
| !! | CCTAGCTTTGTTGATCAATA+TGG | - | chr2_3:16741997-16742016 | Msa0281350:five_prime_UTR | 35.0% |
| AATAGCTCAAAAGGAACCAA+CGG | + | chr2_3:16742045-16742064 | None:intergenic | 35.0% | |
| GAAAATGCCAAGAATGTACT+TGG | + | chr2_3:16740852-16740871 | None:intergenic | 35.0% | |
| AATAGAGAGTGAGTGAATGT+GGG | + | chr2_3:16740895-16740914 | None:intergenic | 35.0% | |
| AAATAGAGAGTGAGTGAATG+TGG | + | chr2_3:16740896-16740915 | None:intergenic | 35.0% | |
| ! | TTTTGCATCCATTAGAGAGA+GGG | + | chr2_3:16740960-16740979 | None:intergenic | 35.0% |
| !! | TACTTGAAAGGTTCTGAAGA+GGG | + | chr2_3:16740989-16741008 | None:intergenic | 35.0% |
| !! | ATACTTGAAAGGTTCTGAAG+AGG | + | chr2_3:16740990-16741009 | None:intergenic | 35.0% |
| ! | TTCAGAACCTTTCAAGTATC+AGG | - | chr2_3:16740991-16741010 | Msa0281350:CDS | 35.0% |
| AAAGTTTCTATCCACTGTGA+AGG | - | chr2_3:16741156-16741175 | Msa0281350:CDS | 35.0% | |
| !!! | AAAGTTTTGAAGCGCATTGA+TGG | - | chr2_3:16741198-16741217 | Msa0281350:CDS | 35.0% |
| AACACCTTCATAGTTATGCA+TGG | + | chr2_3:16741315-16741334 | None:intergenic | 35.0% | |
| TTTGACCAGCTTCCTTAAAA+GGG | + | chr2_3:16741401-16741420 | None:intergenic | 35.0% | |
| ! | CTTCTTTTTCTTCTCTTTGC+CGG | + | chr2_3:16741479-16741498 | None:intergenic | 35.0% |
| AAAAAGTCAAAAACTGACGC+CGG | - | chr2_3:16741592-16741611 | Msa0281350:CDS | 35.0% | |
| AAAAAGAAAGATGGGTGTAG+TGG | - | chr2_3:16741697-16741716 | Msa0281350:intron | 35.0% | |
| AGTGGAAATGGAAATGGAAA+TGG | - | chr2_3:16741715-16741734 | Msa0281350:intron | 35.0% | |
| GGAAATGGAAATGGAAATGA+TGG | - | chr2_3:16741724-16741743 | Msa0281350:intron | 35.0% | |
| ! | AATGGAAATGATGGAAGTGA+TGG | - | chr2_3:16741733-16741752 | Msa0281350:CDS | 35.0% |
| GGATTCCAATTTCAGAATCT+TGG | - | chr2_3:16741793-16741812 | Msa0281350:intron | 35.0% | |
| !! | TCTGACCAAGATTCTGAAAT+TGG | + | chr2_3:16741801-16741820 | None:intergenic | 35.0% |
| ATCTTGTATCCATCAGAAAC+TGG | - | chr2_3:16741865-16741884 | Msa0281350:intron | 35.0% | |
| GAAGATGGAACATGATAAGA+AGG | + | chr2_3:16741961-16741980 | None:intergenic | 35.0% | |
| TATTGATCAACAAAGCTAGG+AGG | + | chr2_3:16741997-16742016 | None:intergenic | 35.0% | |
| CCATATTGATCAACAAAGCT+AGG | + | chr2_3:16742000-16742019 | None:intergenic | 35.0% | |
| !! | CCTAGCTTTGTTGATCAATA+TGG | - | chr2_3:16741997-16742016 | Msa0281350:five_prime_UTR | 35.0% |
| AATAGCTCAAAAGGAACCAA+CGG | + | chr2_3:16742045-16742064 | None:intergenic | 35.0% | |
| GGGGCTTAATGAGAAAAGAA+GGG | + | chr2_3:16740874-16740893 | None:intergenic | 40.0% | |
| ATAGAGAGTGAGTGAATGTG+GGG | + | chr2_3:16740894-16740913 | None:intergenic | 40.0% | |
| ! | CTTTTGCATCCATTAGAGAG+AGG | + | chr2_3:16740961-16740980 | None:intergenic | 40.0% |
| ! | GTTGTGTTGAGACCCTTTTA+AGG | - | chr2_3:16741386-16741405 | Msa0281350:CDS | 40.0% |
| CTTTGACCAGCTTCCTTAAA+AGG | + | chr2_3:16741402-16741421 | None:intergenic | 40.0% | |
| !! | TGCAAGCTTTGTGCTTCTTT+TGG | + | chr2_3:16741517-16741536 | None:intergenic | 40.0% |
| AGCACAAAGCTTGCAAAACA+AGG | - | chr2_3:16741522-16741541 | Msa0281350:CDS | 40.0% | |
| GCACAAAGCTTGCAAAACAA+GGG | - | chr2_3:16741523-16741542 | Msa0281350:CDS | 40.0% | |
| ! | AAAGATGGGTGTAGTGGAAA+TGG | - | chr2_3:16741703-16741722 | Msa0281350:intron | 40.0% |
| TTGACTACAGTAGCTAAGAG+TGG | - | chr2_3:16741757-16741776 | Msa0281350:CDS | 40.0% | |
| TCAGAATCTTGGTCAGACTA+TGG | - | chr2_3:16741804-16741823 | Msa0281350:intron | 40.0% | |
| AGATTGATTGCTGACGTGTA+GGG | + | chr2_3:16741849-16741868 | None:intergenic | 40.0% | |
| AAGATTGATTGCTGACGTGT+AGG | + | chr2_3:16741850-16741869 | None:intergenic | 40.0% | |
| AACTGGTTGTTACCCTTCAA+TGG | - | chr2_3:16741882-16741901 | Msa0281350:intron | 40.0% | |
| TTGTATCCTATGGGAAGAGT+TGG | - | chr2_3:16741931-16741950 | Msa0281350:intron | 40.0% | |
| GGTACTTATCAGGTTCAATC+TGG | - | chr2_3:16742018-16742037 | Msa0281350:five_prime_UTR | 40.0% | |
| GGGGCTTAATGAGAAAAGAA+GGG | + | chr2_3:16740874-16740893 | None:intergenic | 40.0% | |
| ATAGAGAGTGAGTGAATGTG+GGG | + | chr2_3:16740894-16740913 | None:intergenic | 40.0% | |
| ! | CTTTTGCATCCATTAGAGAG+AGG | + | chr2_3:16740961-16740980 | None:intergenic | 40.0% |
| ! | GTTGTGTTGAGACCCTTTTA+AGG | - | chr2_3:16741386-16741405 | Msa0281350:CDS | 40.0% |
| CTTTGACCAGCTTCCTTAAA+AGG | + | chr2_3:16741402-16741421 | None:intergenic | 40.0% | |
| !! | TGCAAGCTTTGTGCTTCTTT+TGG | + | chr2_3:16741517-16741536 | None:intergenic | 40.0% |
| AGCACAAAGCTTGCAAAACA+AGG | - | chr2_3:16741522-16741541 | Msa0281350:CDS | 40.0% | |
| GCACAAAGCTTGCAAAACAA+GGG | - | chr2_3:16741523-16741542 | Msa0281350:CDS | 40.0% | |
| ! | AAAGATGGGTGTAGTGGAAA+TGG | - | chr2_3:16741703-16741722 | Msa0281350:intron | 40.0% |
| TTGACTACAGTAGCTAAGAG+TGG | - | chr2_3:16741757-16741776 | Msa0281350:CDS | 40.0% | |
| TCAGAATCTTGGTCAGACTA+TGG | - | chr2_3:16741804-16741823 | Msa0281350:intron | 40.0% | |
| AGATTGATTGCTGACGTGTA+GGG | + | chr2_3:16741849-16741868 | None:intergenic | 40.0% | |
| AAGATTGATTGCTGACGTGT+AGG | + | chr2_3:16741850-16741869 | None:intergenic | 40.0% | |
| AACTGGTTGTTACCCTTCAA+TGG | - | chr2_3:16741882-16741901 | Msa0281350:intron | 40.0% | |
| TTGTATCCTATGGGAAGAGT+TGG | - | chr2_3:16741931-16741950 | Msa0281350:intron | 40.0% | |
| GGTACTTATCAGGTTCAATC+TGG | - | chr2_3:16742018-16742037 | Msa0281350:five_prime_UTR | 40.0% | |
| GGGGGCTTAATGAGAAAAGA+AGG | + | chr2_3:16740875-16740894 | None:intergenic | 45.0% | |
| TAGAGAGTGAGTGAATGTGG+GGG | + | chr2_3:16740893-16740912 | None:intergenic | 45.0% | |
| GAGAGGGAAGTGGAATTGAA+GGG | + | chr2_3:16740944-16740963 | None:intergenic | 45.0% | |
| AGAGAGGGAAGTGGAATTGA+AGG | + | chr2_3:16740945-16740964 | None:intergenic | 45.0% | |
| TTCCACTTCCCTCTCTCTAA+TGG | - | chr2_3:16740949-16740968 | Msa0281350:CDS | 45.0% | |
| ATCCATTAGAGAGAGGGAAG+TGG | + | chr2_3:16740954-16740973 | None:intergenic | 45.0% | |
| TCTTTCTGCAACCTTCACAG+TGG | + | chr2_3:16741170-16741189 | None:intergenic | 45.0% | |
| !! | TGAGACCCTTTTAAGGAAGC+TGG | - | chr2_3:16741393-16741412 | Msa0281350:CDS | 45.0% |
| TTAAGGAAGCTGGTCAAAGC+TGG | - | chr2_3:16741403-16741422 | Msa0281350:CDS | 45.0% | |
| ! | CTGGAAAGTACGCTGAGATT+TGG | - | chr2_3:16741422-16741441 | Msa0281350:CDS | 45.0% |
| AAAGTACGCTGAGATTTGGC+CGG | - | chr2_3:16741426-16741445 | Msa0281350:CDS | 45.0% | |
| ATTTGGCCGGAGAATCTTGA+CGG | - | chr2_3:16741439-16741458 | Msa0281350:CDS | 45.0% | |
| ! | GGGTGTAGTGGAAATGGAAA+TGG | - | chr2_3:16741709-16741728 | Msa0281350:intron | 45.0% |
| AATTGGAATCCACTGTGTGC+TGG | + | chr2_3:16741784-16741803 | None:intergenic | 45.0% | |
| GGGTAACAACCAGTTTCTGA+TGG | + | chr2_3:16741877-16741896 | None:intergenic | 45.0% | |
| GGGGGCTTAATGAGAAAAGA+AGG | + | chr2_3:16740875-16740894 | None:intergenic | 45.0% | |
| TAGAGAGTGAGTGAATGTGG+GGG | + | chr2_3:16740893-16740912 | None:intergenic | 45.0% | |
| GAGAGGGAAGTGGAATTGAA+GGG | + | chr2_3:16740944-16740963 | None:intergenic | 45.0% | |
| AGAGAGGGAAGTGGAATTGA+AGG | + | chr2_3:16740945-16740964 | None:intergenic | 45.0% | |
| TTCCACTTCCCTCTCTCTAA+TGG | - | chr2_3:16740949-16740968 | Msa0281350:CDS | 45.0% | |
| ATCCATTAGAGAGAGGGAAG+TGG | + | chr2_3:16740954-16740973 | None:intergenic | 45.0% | |
| TCTTTCTGCAACCTTCACAG+TGG | + | chr2_3:16741170-16741189 | None:intergenic | 45.0% | |
| !! | TGAGACCCTTTTAAGGAAGC+TGG | - | chr2_3:16741393-16741412 | Msa0281350:CDS | 45.0% |
| TTAAGGAAGCTGGTCAAAGC+TGG | - | chr2_3:16741403-16741422 | Msa0281350:CDS | 45.0% | |
| ! | CTGGAAAGTACGCTGAGATT+TGG | - | chr2_3:16741422-16741441 | Msa0281350:CDS | 45.0% |
| AAAGTACGCTGAGATTTGGC+CGG | - | chr2_3:16741426-16741445 | Msa0281350:CDS | 45.0% | |
| ATTTGGCCGGAGAATCTTGA+CGG | - | chr2_3:16741439-16741458 | Msa0281350:CDS | 45.0% | |
| ! | GGGTGTAGTGGAAATGGAAA+TGG | - | chr2_3:16741709-16741728 | Msa0281350:intron | 45.0% |
| AATTGGAATCCACTGTGTGC+TGG | + | chr2_3:16741784-16741803 | None:intergenic | 45.0% | |
| GGGTAACAACCAGTTTCTGA+TGG | + | chr2_3:16741877-16741896 | None:intergenic | 45.0% | |
| TTTGGCCGGAGAATCTTGAC+GGG | - | chr2_3:16741440-16741459 | Msa0281350:CDS | 50.0% | |
| GACGGGAAGGGAAAAAACTC+CGG | - | chr2_3:16741457-16741476 | Msa0281350:CDS | 50.0% | |
| ! | TTACCGTCCGGTGACTTTTC+CGG | + | chr2_3:16741625-16741644 | None:intergenic | 50.0% |
| AGGGCTGAGATTCACTTGGT+GGG | + | chr2_3:16741830-16741849 | None:intergenic | 50.0% | |
| TAGGGCTGAGATTCACTTGG+TGG | + | chr2_3:16741831-16741850 | None:intergenic | 50.0% | |
| GTGTAGGGCTGAGATTCACT+TGG | + | chr2_3:16741834-16741853 | None:intergenic | 50.0% | |
| GGATCACCAACTCTTCCCAT+AGG | + | chr2_3:16741940-16741959 | None:intergenic | 50.0% | |
| AAGCTAGGAGGACACGTGTA+GGG | + | chr2_3:16741985-16742004 | None:intergenic | 50.0% | |
| AAAGCTAGGAGGACACGTGT+AGG | + | chr2_3:16741986-16742005 | None:intergenic | 50.0% | |
| TCAGGTTCAATCTGGACCGT+TGG | - | chr2_3:16742026-16742045 | Msa0281350:five_prime_UTR | 50.0% | |
| TTTGGCCGGAGAATCTTGAC+GGG | - | chr2_3:16741440-16741459 | Msa0281350:CDS | 50.0% | |
| GACGGGAAGGGAAAAAACTC+CGG | - | chr2_3:16741457-16741476 | Msa0281350:CDS | 50.0% | |
| ! | TTACCGTCCGGTGACTTTTC+CGG | + | chr2_3:16741625-16741644 | None:intergenic | 50.0% |
| AGGGCTGAGATTCACTTGGT+GGG | + | chr2_3:16741830-16741849 | None:intergenic | 50.0% | |
| TAGGGCTGAGATTCACTTGG+TGG | + | chr2_3:16741831-16741850 | None:intergenic | 50.0% | |
| GTGTAGGGCTGAGATTCACT+TGG | + | chr2_3:16741834-16741853 | None:intergenic | 50.0% | |
| GGATCACCAACTCTTCCCAT+AGG | + | chr2_3:16741940-16741959 | None:intergenic | 50.0% | |
| AAGCTAGGAGGACACGTGTA+GGG | + | chr2_3:16741985-16742004 | None:intergenic | 50.0% | |
| AAAGCTAGGAGGACACGTGT+AGG | + | chr2_3:16741986-16742005 | None:intergenic | 50.0% | |
| TCAGGTTCAATCTGGACCGT+TGG | - | chr2_3:16742026-16742045 | Msa0281350:five_prime_UTR | 50.0% | |
| CCCTTCCCGTCAAGATTCTC+CGG | + | chr2_3:16741448-16741467 | None:intergenic | 55.0% | |
| CCGGAGAATCTTGACGGGAA+GGG | - | chr2_3:16741445-16741464 | Msa0281350:CDS | 55.0% | |
| ! | TGACTTTTCCGGCGACTCTC+CGG | + | chr2_3:16741614-16741633 | None:intergenic | 55.0% |
| AGAGTCGCCGGAAAAGTCAC+CGG | - | chr2_3:16741615-16741634 | Msa0281350:intron | 55.0% | |
| GGAGGAACATGGTTACCGTC+CGG | + | chr2_3:16741637-16741656 | None:intergenic | 55.0% | |
| GGACGGTAACCATGTTCCTC+CGG | - | chr2_3:16741636-16741655 | Msa0281350:intron | 55.0% | |
| AACCATGTTCCTCCGGTGAG+TGG | - | chr2_3:16741643-16741662 | Msa0281350:intron | 55.0% | |
| AAGAGTGGACCAGCACACAG+TGG | - | chr2_3:16741772-16741791 | Msa0281350:CDS | 55.0% | |
| GGACACGTGTAGGGTGAAGA+TGG | + | chr2_3:16741976-16741995 | None:intergenic | 55.0% | |
| CCCTTCCCGTCAAGATTCTC+CGG | + | chr2_3:16741448-16741467 | None:intergenic | 55.0% | |
| CCGGAGAATCTTGACGGGAA+GGG | - | chr2_3:16741445-16741464 | Msa0281350:CDS | 55.0% | |
| ! | TGACTTTTCCGGCGACTCTC+CGG | + | chr2_3:16741614-16741633 | None:intergenic | 55.0% |
| AGAGTCGCCGGAAAAGTCAC+CGG | - | chr2_3:16741615-16741634 | Msa0281350:intron | 55.0% | |
| GGAGGAACATGGTTACCGTC+CGG | + | chr2_3:16741637-16741656 | None:intergenic | 55.0% | |
| GGACGGTAACCATGTTCCTC+CGG | - | chr2_3:16741636-16741655 | Msa0281350:intron | 55.0% | |
| AACCATGTTCCTCCGGTGAG+TGG | - | chr2_3:16741643-16741662 | Msa0281350:intron | 55.0% | |
| AAGAGTGGACCAGCACACAG+TGG | - | chr2_3:16741772-16741791 | Msa0281350:CDS | 55.0% | |
| GGACACGTGTAGGGTGAAGA+TGG | + | chr2_3:16741976-16741995 | None:intergenic | 55.0% | |
| GCCGGAGAATCTTGACGGGA+AGG | - | chr2_3:16741444-16741463 | Msa0281350:CDS | 60.0% | |
| TCGCCGGAAAAGTCACCGGA+CGG | - | chr2_3:16741619-16741638 | Msa0281350:intron | 60.0% | |
| CACCACTCACCGGAGGAACA+TGG | + | chr2_3:16741648-16741667 | None:intergenic | 60.0% | |
| CATGTTCCTCCGGTGAGTGG+TGG | - | chr2_3:16741646-16741665 | Msa0281350:intron | 60.0% | |
| GAACCACCTCCACCACTCAC+CGG | + | chr2_3:16741658-16741677 | None:intergenic | 60.0% | |
| GCCGGAGAATCTTGACGGGA+AGG | - | chr2_3:16741444-16741463 | Msa0281350:CDS | 60.0% | |
| TCGCCGGAAAAGTCACCGGA+CGG | - | chr2_3:16741619-16741638 | Msa0281350:intron | 60.0% | |
| CACCACTCACCGGAGGAACA+TGG | + | chr2_3:16741648-16741667 | None:intergenic | 60.0% | |
| CATGTTCCTCCGGTGAGTGG+TGG | - | chr2_3:16741646-16741665 | Msa0281350:intron | 60.0% | |
| GAACCACCTCCACCACTCAC+CGG | + | chr2_3:16741658-16741677 | None:intergenic | 60.0% | |
| AACTGACGCCGGAGAGTCGC+CGG | - | chr2_3:16741603-16741622 | Msa0281350:intron | 65.0% | |
| GTTCCTCCGGTGAGTGGTGG+AGG | - | chr2_3:16741649-16741668 | Msa0281350:intron | 65.0% | |
| AACTGACGCCGGAGAGTCGC+CGG | - | chr2_3:16741603-16741622 | Msa0281350:intron | 65.0% | |
| GTTCCTCCGGTGAGTGGTGG+AGG | - | chr2_3:16741649-16741668 | Msa0281350:intron | 65.0% | |
| CCACCTCCACCACTCACCGG+AGG | + | chr2_3:16741655-16741674 | None:intergenic | 70.0% | |
| ! | CCTCCGGTGAGTGGTGGAGG+TGG | - | chr2_3:16741652-16741671 | Msa0281350:intron | 70.0% |
| CCACCTCCACCACTCACCGG+AGG | + | chr2_3:16741655-16741674 | None:intergenic | 70.0% | |
| ! | CCTCCGGTGAGTGGTGGAGG+TGG | - | chr2_3:16741652-16741671 | Msa0281350:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 16740848 | 16742101 | 16740848 | ID=Msa0281350;Name=Msa0281350 |
| chr2_3 | mRNA | 16740848 | 16742101 | 16740848 | ID=Msa0281350-mRNA-1;Parent=Msa0281350;Name=Msa0281350-mRNA-1;_AED=0.16;_eAED=0.16;_QI=120|0.66|0.5|1|0.33|0.5|4|0|293 |
| chr2_3 | exon | 16740848 | 16741552 | 16740848 | ID=Msa0281350-mRNA-1:exon:6929;Parent=Msa0281350-mRNA-1 |
| chr2_3 | exon | 16741564 | 16741619 | 16741564 | ID=Msa0281350-mRNA-1:exon:6928;Parent=Msa0281350-mRNA-1 |
| chr2_3 | exon | 16741730 | 16741805 | 16741730 | ID=Msa0281350-mRNA-1:exon:6927;Parent=Msa0281350-mRNA-1 |
| chr2_3 | exon | 16741937 | 16742101 | 16741937 | ID=Msa0281350-mRNA-1:exon:6926;Parent=Msa0281350-mRNA-1 |
| chr2_3 | five_prime_UTR | 16741982 | 16742101 | 16741982 | ID=Msa0281350-mRNA-1:five_prime_utr;Parent=Msa0281350-mRNA-1 |
| chr2_3 | CDS | 16741937 | 16741981 | 16741937 | ID=Msa0281350-mRNA-1:cds;Parent=Msa0281350-mRNA-1 |
| chr2_3 | CDS | 16741730 | 16741805 | 16741730 | ID=Msa0281350-mRNA-1:cds;Parent=Msa0281350-mRNA-1 |
| chr2_3 | CDS | 16741564 | 16741619 | 16741564 | ID=Msa0281350-mRNA-1:cds;Parent=Msa0281350-mRNA-1 |
| chr2_3 | CDS | 16740848 | 16741552 | 16740848 | ID=Msa0281350-mRNA-1:cds;Parent=Msa0281350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
