Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0587620 | XP_013454678.1 | 98.639 | 147 | 2 | 0 | 1 | 147 | 1 | 147 | 3.33e-100 | 294 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0587620 | 0.845152 | 4.854253e-59 | -8.615850e-47 |
| Msa0000190 | Msa0587620 | 0.803130 | 4.036628e-49 | -8.615850e-47 |
| Msa0000560 | Msa0587620 | 0.800075 | 1.708325e-48 | -8.615850e-47 |
| Msa0001940 | Msa0587620 | 0.806626 | 7.506274e-50 | -8.615850e-47 |
| Msa0002580 | Msa0587620 | 0.831915 | 1.272999e-55 | -8.615850e-47 |
| Msa0005890 | Msa0587620 | 0.852474 | 4.509688e-61 | -8.615850e-47 |
| Msa0008040 | Msa0587620 | 0.801552 | 8.530590e-49 | -8.615850e-47 |
| Msa0017670 | Msa0587620 | 0.822797 | 1.954631e-53 | -8.615850e-47 |
| Msa0018160 | Msa0587620 | 0.830400 | 3.000066e-55 | -8.615850e-47 |
| Msa0019900 | Msa0587620 | 0.805993 | 1.020540e-49 | -8.615850e-47 |
| Msa0024550 | Msa0587620 | 0.816850 | 4.470035e-52 | -8.615850e-47 |
| Msa0025160 | Msa0587620 | 0.833485 | 5.192406e-56 | -8.615850e-47 |
| Msa0025580 | Msa0587620 | 0.807105 | 5.947396e-50 | -8.615850e-47 |
| Msa0028420 | Msa0587620 | 0.834163 | 3.513945e-56 | -8.615850e-47 |
| Msa0032460 | Msa0587620 | 0.848962 | 4.386132e-60 | -8.615850e-47 |
| Msa0032960 | Msa0587620 | -0.823515 | 1.329199e-53 | -8.615850e-47 |
| Msa0034210 | Msa0587620 | 0.816967 | 4.208653e-52 | -8.615850e-47 |
| Msa0035060 | Msa0587620 | 0.821926 | 3.113971e-53 | -8.615850e-47 |
| Msa0035340 | Msa0587620 | 0.828566 | 8.373443e-55 | -8.615850e-47 |
| Msa0036870 | Msa0587620 | 0.834790 | 2.445203e-56 | -8.615850e-47 |
| Msa0042640 | Msa0587620 | 0.807481 | 4.949743e-50 | -8.615850e-47 |
| Msa0050660 | Msa0587620 | 0.847101 | 1.430800e-59 | -8.615850e-47 |
| Msa0050700 | Msa0587620 | 0.845298 | 4.432092e-59 | -8.615850e-47 |
| Msa0050790 | Msa0587620 | 0.857541 | 1.521865e-62 | -8.615850e-47 |
| Msa0052260 | Msa0587620 | 0.803119 | 4.058468e-49 | -8.615850e-47 |
| Msa0054690 | Msa0587620 | 0.854189 | 1.452917e-61 | -8.615850e-47 |
| Msa0067330 | Msa0587620 | 0.801848 | 7.419549e-49 | -8.615850e-47 |
| Msa0071860 | Msa0587620 | 0.827861 | 1.237950e-54 | -8.615850e-47 |
| Msa0071880 | Msa0587620 | 0.831384 | 1.720975e-55 | -8.615850e-47 |
| Msa0074350 | Msa0587620 | 0.817089 | 3.951056e-52 | -8.615850e-47 |
| Msa0074510 | Msa0587620 | 0.802130 | 6.490509e-49 | -8.615850e-47 |
| Msa0077340 | Msa0587620 | 0.815554 | 8.712442e-52 | -8.615850e-47 |
| Msa0081390 | Msa0587620 | 0.800214 | 1.600523e-48 | -8.615850e-47 |
| Msa0081520 | Msa0587620 | 0.812067 | 5.107701e-51 | -8.615850e-47 |
| Msa0090400 | Msa0587620 | 0.834763 | 2.483341e-56 | -8.615850e-47 |
| Msa0092790 | Msa0587620 | 0.825594 | 4.305071e-54 | -8.615850e-47 |
| Msa0097260 | Msa0587620 | 0.803153 | 3.992589e-49 | -8.615850e-47 |
| Msa0098040 | Msa0587620 | 0.838220 | 3.272027e-57 | -8.615850e-47 |
| Msa0117480 | Msa0587620 | 0.830255 | 3.255347e-55 | -8.615850e-47 |
| Msa0120400 | Msa0587620 | 0.818085 | 2.356288e-52 | -8.615850e-47 |
| Msa0123340 | Msa0587620 | 0.802709 | 4.932285e-49 | -8.615850e-47 |
| Msa0124060 | Msa0587620 | 0.801276 | 9.718528e-49 | -8.615850e-47 |
| Msa0124280 | Msa0587620 | 0.802729 | 4.886577e-49 | -8.615850e-47 |
| Msa0125210 | Msa0587620 | 0.805889 | 1.073535e-49 | -8.615850e-47 |
| Msa0125360 | Msa0587620 | 0.803679 | 3.107412e-49 | -8.615850e-47 |
| Msa0128310 | Msa0587620 | 0.831071 | 2.055038e-55 | -8.615850e-47 |
| Msa0136650 | Msa0587620 | 0.832530 | 8.971685e-56 | -8.615850e-47 |
| Msa0137880 | Msa0587620 | 0.828486 | 8.752077e-55 | -8.615850e-47 |
| Msa0140280 | Msa0587620 | 0.824988 | 5.987731e-54 | -8.615850e-47 |
| Msa0146040 | Msa0587620 | 0.813193 | 2.897594e-51 | -8.615850e-47 |
| Msa0146650 | Msa0587620 | 0.803232 | 3.846215e-49 | -8.615850e-47 |
| Msa0149350 | Msa0587620 | 0.826281 | 2.956479e-54 | -8.615850e-47 |
| Msa0158860 | Msa0587620 | 0.838747 | 2.393363e-57 | -8.615850e-47 |
| Msa0168500 | Msa0587620 | 0.809862 | 1.533716e-50 | -8.615850e-47 |
| Msa0173290 | Msa0587620 | 0.807446 | 5.036095e-50 | -8.615850e-47 |
| Msa0173690 | Msa0587620 | 0.816163 | 6.370868e-52 | -8.615850e-47 |
| Msa0174440 | Msa0587620 | 0.812657 | 3.797877e-51 | -8.615850e-47 |
| Msa0174450 | Msa0587620 | 0.816341 | 5.812999e-52 | -8.615850e-47 |
| Msa0176060 | Msa0587620 | 0.810932 | 9.015351e-51 | -8.615850e-47 |
| Msa0182190 | Msa0587620 | 0.820082 | 8.277549e-53 | -8.615850e-47 |
| Msa0182240 | Msa0587620 | 0.828232 | 1.008039e-54 | -8.615850e-47 |
| Msa0185960 | Msa0587620 | 0.811628 | 6.365806e-51 | -8.615850e-47 |
| Msa0188610 | Msa0587620 | 0.813776 | 2.156991e-51 | -8.615850e-47 |
| Msa0190570 | Msa0587620 | 0.812716 | 3.685565e-51 | -8.615850e-47 |
| Msa0225100 | Msa0587620 | 0.868906 | 4.606787e-66 | -8.615850e-47 |
| Msa0225860 | Msa0587620 | 0.840814 | 6.932835e-58 | -8.615850e-47 |
| Msa0230800 | Msa0587620 | 0.838048 | 3.623176e-57 | -8.615850e-47 |
| Msa0230870 | Msa0587620 | 0.808335 | 3.258273e-50 | -8.615850e-47 |
| Msa0231200 | Msa0587620 | 0.855009 | 8.410713e-62 | -8.615850e-47 |
| Msa0369790 | Msa0587620 | 0.828113 | 1.077024e-54 | -8.615850e-47 |
| Msa0378720 | Msa0587620 | 0.846692 | 1.851804e-59 | -8.615850e-47 |
| Msa0380620 | Msa0587620 | 0.827633 | 1.404769e-54 | -8.615850e-47 |
| Msa0380670 | Msa0587620 | 0.834885 | 2.313317e-56 | -8.615850e-47 |
| Msa0405680 | Msa0587620 | 0.808149 | 3.569101e-50 | -8.615850e-47 |
| Msa0415600 | Msa0587620 | 0.813801 | 2.129419e-51 | -8.615850e-47 |
| Msa0419700 | Msa0587620 | 0.830061 | 3.630589e-55 | -8.615850e-47 |
| Msa0422050 | Msa0587620 | 0.808713 | 2.705901e-50 | -8.615850e-47 |
| Msa0424140 | Msa0587620 | 0.804032 | 2.623767e-49 | -8.615850e-47 |
| Msa0426530 | Msa0587620 | 0.845490 | 3.931649e-59 | -8.615850e-47 |
| Msa0428150 | Msa0587620 | 0.802349 | 5.851314e-49 | -8.615850e-47 |
| Msa0428370 | Msa0587620 | 0.850743 | 1.394279e-60 | -8.615850e-47 |
| Msa0430260 | Msa0587620 | 0.832265 | 1.043289e-55 | -8.615850e-47 |
| Msa0430300 | Msa0587620 | 0.854023 | 1.622337e-61 | -8.615850e-47 |
| Msa0432140 | Msa0587620 | 0.818485 | 1.912629e-52 | -8.615850e-47 |
| Msa0435210 | Msa0587620 | 0.834105 | 3.631922e-56 | -8.615850e-47 |
| Msa0436910 | Msa0587620 | 0.833690 | 4.614848e-56 | -8.615850e-47 |
| Msa0442830 | Msa0587620 | 0.814940 | 1.192942e-51 | -8.615850e-47 |
| Msa0453040 | Msa0587620 | 0.805453 | 1.325293e-49 | -8.615850e-47 |
| Msa0462500 | Msa0587620 | 0.806891 | 6.599391e-50 | -8.615850e-47 |
| Msa0464000 | Msa0587620 | 0.826069 | 3.321322e-54 | -8.615850e-47 |
| Msa0465530 | Msa0587620 | 0.804298 | 2.310362e-49 | -8.615850e-47 |
| Msa0472950 | Msa0587620 | 0.846641 | 1.911797e-59 | -8.615850e-47 |
| Msa0474730 | Msa0587620 | 0.846610 | 1.949285e-59 | -8.615850e-47 |
| Msa0476650 | Msa0587620 | 0.810885 | 9.226856e-51 | -8.615850e-47 |
| Msa0244640 | Msa0587620 | 0.846832 | 1.695645e-59 | -8.615850e-47 |
| Msa0249860 | Msa0587620 | 0.815659 | 8.252632e-52 | -8.615850e-47 |
| Msa0260510 | Msa0587620 | 0.801475 | 8.847685e-49 | -8.615850e-47 |
| Msa0266180 | Msa0587620 | 0.833221 | 6.039463e-56 | -8.615850e-47 |
| Msa0267110 | Msa0587620 | 0.837247 | 5.817612e-57 | -8.615850e-47 |
| Msa0270340 | Msa0587620 | 0.829495 | 4.986389e-55 | -8.615850e-47 |
| Msa0275820 | Msa0587620 | 0.802251 | 6.130273e-49 | -8.615850e-47 |
| Msa0281350 | Msa0587620 | 0.802134 | 6.478322e-49 | -8.615850e-47 |
| Msa0281390 | Msa0587620 | 0.824117 | 9.601212e-54 | -8.615850e-47 |
| Msa0283330 | Msa0587620 | 0.828385 | 9.256833e-55 | -8.615850e-47 |
| Msa0287740 | Msa0587620 | 0.859601 | 3.694390e-63 | -8.615850e-47 |
| Msa0292330 | Msa0587620 | 0.820697 | 5.980295e-53 | -8.615850e-47 |
| Msa0292400 | Msa0587620 | 0.802614 | 5.159388e-49 | -8.615850e-47 |
| Msa0298470 | Msa0587620 | 0.852856 | 3.508384e-61 | -8.615850e-47 |
| Msa0307270 | Msa0587620 | 0.821263 | 4.430168e-53 | -8.615850e-47 |
| Msa0307670 | Msa0587620 | 0.820804 | 5.653106e-53 | -8.615850e-47 |
| Msa0320660 | Msa0587620 | 0.828434 | 9.010137e-55 | -8.615850e-47 |
| Msa0321620 | Msa0587620 | 0.845275 | 4.496141e-59 | -8.615850e-47 |
| Msa0323270 | Msa0587620 | 0.858817 | 6.350241e-63 | -8.615850e-47 |
| Msa0340500 | Msa0587620 | 0.808582 | 2.885773e-50 | -8.615850e-47 |
| Msa0349710 | Msa0587620 | 0.805862 | 1.087443e-49 | -8.615850e-47 |
| Msa0483910 | Msa0587620 | 0.809777 | 1.600039e-50 | -8.615850e-47 |
| Msa0500380 | Msa0587620 | 0.809587 | 1.757367e-50 | -8.615850e-47 |
| Msa0509550 | Msa0587620 | 0.813135 | 2.982726e-51 | -8.615850e-47 |
| Msa0511750 | Msa0587620 | 0.822412 | 2.402242e-53 | -8.615850e-47 |
| Msa0517250 | Msa0587620 | 0.884669 | 1.574239e-71 | -8.615850e-47 |
| Msa0519750 | Msa0587620 | 0.804821 | 1.796969e-49 | -8.615850e-47 |
| Msa0519830 | Msa0587620 | 0.809259 | 2.067101e-50 | -8.615850e-47 |
| Msa0520260 | Msa0587620 | 0.801230 | 9.933287e-49 | -8.615850e-47 |
| Msa0520890 | Msa0587620 | 0.804149 | 2.481647e-49 | -8.615850e-47 |
| Msa0520990 | Msa0587620 | 0.831053 | 2.075945e-55 | -8.615850e-47 |
| Msa0528570 | Msa0587620 | 0.846113 | 2.662881e-59 | -8.615850e-47 |
| Msa0529030 | Msa0587620 | 0.841670 | 4.127030e-58 | -8.615850e-47 |
| Msa0530780 | Msa0587620 | 0.852249 | 5.226419e-61 | -8.615850e-47 |
| Msa0532070 | Msa0587620 | 0.804506 | 2.090442e-49 | -8.615850e-47 |
| Msa0541300 | Msa0587620 | 0.822206 | 2.681916e-53 | -8.615850e-47 |
| Msa0541310 | Msa0587620 | 0.813930 | 1.994968e-51 | -8.615850e-47 |
| Msa0543660 | Msa0587620 | 0.825335 | 4.957550e-54 | -8.615850e-47 |
| Msa0546500 | Msa0587620 | 0.807890 | 4.051239e-50 | -8.615850e-47 |
| Msa0548470 | Msa0587620 | 0.838998 | 2.061234e-57 | -8.615850e-47 |
| Msa0549370 | Msa0587620 | 0.811434 | 7.014082e-51 | -8.615850e-47 |
| Msa0550050 | Msa0587620 | 0.807082 | 6.014178e-50 | -8.615850e-47 |
| Msa0556640 | Msa0587620 | 0.802977 | 4.343288e-49 | -8.615850e-47 |
| Msa0557460 | Msa0587620 | 0.823258 | 1.526278e-53 | -8.615850e-47 |
| Msa0563940 | Msa0587620 | 0.802705 | 4.941865e-49 | -8.615850e-47 |
| Msa0565090 | Msa0587620 | 0.807127 | 5.883069e-50 | -8.615850e-47 |
| Msa0567170 | Msa0587620 | 0.812856 | 3.434270e-51 | -8.615850e-47 |
| Msa0571290 | Msa0587620 | 0.815696 | 8.097732e-52 | -8.615850e-47 |
| Msa0574050 | Msa0587620 | 0.813430 | 2.570197e-51 | -8.615850e-47 |
| Msa0580370 | Msa0587620 | 0.855469 | 6.179257e-62 | -8.615850e-47 |
| Msa0583360 | Msa0587620 | -0.802351 | 5.847786e-49 | -8.615850e-47 |
| Msa0584420 | Msa0587620 | 0.835226 | 1.898540e-56 | -8.615850e-47 |
| Msa0585020 | Msa0587620 | 0.830280 | 3.210518e-55 | -8.615850e-47 |
| Msa0587620 | Msa0597270 | 0.843555 | 1.303544e-58 | -8.615850e-47 |
| Msa0587620 | Msa0597790 | 0.820895 | 5.385701e-53 | -8.615850e-47 |
| Msa0587620 | Msa0600930 | 0.826607 | 2.471861e-54 | -8.615850e-47 |
| Msa0587620 | Msa0605560 | 0.800029 | 1.745412e-48 | -8.615850e-47 |
| Msa0587620 | Msa0611210 | 0.821360 | 4.208446e-53 | -8.615850e-47 |
| Msa0587620 | Msa0626450 | 0.863005 | 3.389132e-64 | -8.615850e-47 |
| Msa0587620 | Msa0626490 | 0.860136 | 2.549596e-63 | -8.615850e-47 |
| Msa0587620 | Msa0640200 | 0.831884 | 1.296228e-55 | -8.615850e-47 |
| Msa0587620 | Msa0644410 | 0.848730 | 5.089080e-60 | -8.615850e-47 |
| Msa0587620 | Msa0646510 | 0.800501 | 1.399463e-48 | -8.615850e-47 |
| Msa0587620 | Msa0651550 | 0.836099 | 1.141305e-56 | -8.615850e-47 |
| Msa0587620 | Msa0652170 | 0.814655 | 1.379060e-51 | -8.615850e-47 |
| Msa0587620 | Msa0652770 | 0.813060 | 3.099034e-51 | -8.615850e-47 |
| Msa0587620 | Msa0658640 | 0.822952 | 1.798341e-53 | -8.615850e-47 |
| Msa0587620 | Msa0661150 | 0.853516 | 2.269131e-61 | -8.615850e-47 |
| Msa0587620 | Msa0663300 | 0.800319 | 1.524023e-48 | -8.615850e-47 |
| Msa0587620 | Msa0664060 | 0.807203 | 5.668697e-50 | -8.615850e-47 |
| Msa0587620 | Msa0664600 | 0.856151 | 3.905650e-62 | -8.615850e-47 |
| Msa0587620 | Msa0665620 | 0.862655 | 4.345080e-64 | -8.615850e-47 |
| Msa0587620 | Msa0670100 | 0.828655 | 7.968845e-55 | -8.615850e-47 |
| Msa0587620 | Msa0675330 | 0.833267 | 5.882166e-56 | -8.615850e-47 |
| Msa0587620 | Msa0678490 | 0.813689 | 2.253641e-51 | -8.615850e-47 |
| Msa0587620 | Msa0683570 | 0.821331 | 4.272841e-53 | -8.615850e-47 |
| Msa0587620 | Msa0689520 | 0.808730 | 2.682532e-50 | -8.615850e-47 |
| Msa0587620 | Msa0700460 | 0.880241 | 6.455082e-70 | -8.615850e-47 |
| Msa0587620 | Msa0713700 | 0.803042 | 4.209355e-49 | -8.615850e-47 |
| Msa0587620 | Msa0725750 | 0.802057 | 6.720466e-49 | -8.615850e-47 |
| Msa0587620 | Msa0735780 | 0.831073 | 2.052921e-55 | -8.615850e-47 |
| Msa0587620 | Msa0738700 | 0.832052 | 1.178025e-55 | -8.615850e-47 |
| Msa0587620 | Msa0741220 | 0.859360 | 4.364240e-63 | -8.615850e-47 |
| Msa0587620 | Msa0742740 | 0.809641 | 1.711526e-50 | -8.615850e-47 |
| Msa0587620 | Msa0756490 | 0.858758 | 6.612087e-63 | -8.615850e-47 |
| Msa0587620 | Msa0761670 | 0.827738 | 1.325303e-54 | -8.615850e-47 |
| Msa0587620 | Msa0765840 | 0.811855 | 5.680946e-51 | -8.615850e-47 |
| Msa0587620 | Msa0768990 | 0.826213 | 3.068949e-54 | -8.615850e-47 |
| Msa0587620 | Msa0769180 | 0.811561 | 6.583803e-51 | -8.615850e-47 |
| Msa0587620 | Msa0773670 | 0.806884 | 6.622014e-50 | -8.615850e-47 |
| Msa0587620 | Msa0792370 | 0.824972 | 6.039926e-54 | -8.615850e-47 |
| Msa0587620 | Msa0795870 | 0.850973 | 1.201102e-60 | -8.615850e-47 |
| Msa0587620 | Msa0819170 | 0.808663 | 2.772448e-50 | -8.615850e-47 |
| Msa0587620 | Msa0822730 | 0.806887 | 6.611122e-50 | -8.615850e-47 |
| Msa0587620 | Msa0823820 | 0.817494 | 3.203817e-52 | -8.615850e-47 |
| Msa0587620 | Msa0824450 | 0.803035 | 4.223612e-49 | -8.615850e-47 |
| Msa0587620 | Msa0829300 | 0.854207 | 1.434988e-61 | -8.615850e-47 |
| Msa0587620 | Msa0829330 | 0.852929 | 3.342769e-61 | -8.615850e-47 |
| Msa0587620 | Msa0833650 | 0.845937 | 2.973199e-59 | -8.615850e-47 |
| Msa0587620 | Msa0835490 | 0.831029 | 2.103594e-55 | -8.615850e-47 |
| Msa0587620 | Msa0845440 | 0.820793 | 5.684380e-53 | -8.615850e-47 |
| Msa0587620 | Msa0849390 | 0.814700 | 1.348329e-51 | -8.615850e-47 |
| Msa0587620 | Msa0859290 | 0.836171 | 1.094017e-56 | -8.615850e-47 |
| Msa0587620 | Msa0863010 | 0.816278 | 6.005373e-52 | -8.615850e-47 |
| Msa0587620 | Msa0871880 | 0.821686 | 3.538860e-53 | -8.615850e-47 |
| Msa0587620 | Msa0876310 | 0.807256 | 5.523783e-50 | -8.615850e-47 |
| Msa0587620 | Msa0881360 | 0.822067 | 2.887960e-53 | -8.615850e-47 |
| Msa0587620 | Msa0894790 | 0.857484 | 1.581981e-62 | -8.615850e-47 |
| Msa0587620 | Msa0905240 | 0.805540 | 1.270590e-49 | -8.615850e-47 |
| Msa0587620 | Msa0921590 | 0.811279 | 7.579617e-51 | -8.615850e-47 |
| Msa0587620 | Msa0937230 | 0.812262 | 4.630790e-51 | -8.615850e-47 |
| Msa0587620 | Msa0944700 | 0.808880 | 2.491963e-50 | -8.615850e-47 |
| Msa0587620 | Msa0945110 | 0.850825 | 1.321331e-60 | -8.615850e-47 |
| Msa0587620 | Msa0945190 | 0.816612 | 5.055277e-52 | -8.615850e-47 |
| Msa0587620 | Msa0967870 | 0.844847 | 5.866475e-59 | -8.615850e-47 |
| Msa0587620 | Msa0974520 | 0.822611 | 2.159261e-53 | -8.615850e-47 |
| Msa0587620 | Msa0980990 | 0.812460 | 4.192355e-51 | -8.615850e-47 |
| Msa0587620 | Msa1003800 | 0.802483 | 5.492111e-49 | -8.615850e-47 |
| Msa0587620 | Msa1011530 | 0.816309 | 5.910441e-52 | -8.615850e-47 |
| Msa0587620 | Msa1018690 | 0.832473 | 9.268214e-56 | -8.615850e-47 |
| Msa0587620 | Msa1019430 | 0.824079 | 9.802296e-54 | -8.615850e-47 |
| Msa0587620 | Msa1019470 | 0.812493 | 4.124796e-51 | -8.615850e-47 |
| Msa0587620 | Msa1020480 | 0.837205 | 5.962110e-57 | -8.615850e-47 |
| Msa0587620 | Msa1020510 | 0.832776 | 7.794578e-56 | -8.615850e-47 |
| Msa0587620 | Msa1020670 | 0.841273 | 5.250179e-58 | -8.615850e-47 |
| Msa0587620 | Msa1021590 | 0.851340 | 9.458259e-61 | -8.615850e-47 |
| Msa0587620 | Msa1028100 | 0.803261 | 3.792811e-49 | -8.615850e-47 |
| Msa0587620 | Msa1034600 | 0.817448 | 3.281098e-52 | -8.615850e-47 |
| Msa0587620 | Msa1042160 | 0.872247 | 3.683402e-67 | -8.615850e-47 |
| Msa0587620 | Msa1042190 | 0.871946 | 4.635931e-67 | -8.615850e-47 |
| Msa0587620 | Msa1044680 | 0.885610 | 7.009476e-72 | -8.615850e-47 |
| Msa0587620 | Msa1045140 | 0.830023 | 3.708506e-55 | -8.615850e-47 |
| Msa0587620 | Msa1051900 | 0.819936 | 8.939635e-53 | -8.615850e-47 |
| Msa0587620 | Msa1064370 | 0.807031 | 6.163983e-50 | -8.615850e-47 |
| Msa0587620 | Msa1072940 | 0.822979 | 1.772596e-53 | -8.615850e-47 |
| Msa0587620 | Msa1074370 | 0.828545 | 8.473000e-55 | -8.615850e-47 |
| Msa0587620 | Msa1078170 | 0.803821 | 2.903407e-49 | -8.615850e-47 |
| Msa0587620 | Msa1078820 | 0.805516 | 1.285408e-49 | -8.615850e-47 |
| Msa0587620 | Msa1080000 | 0.848329 | 6.568012e-60 | -8.615850e-47 |
| Msa0587620 | Msa1081690 | 0.813413 | 2.592176e-51 | -8.615850e-47 |
| Msa0587620 | Msa1096960 | 0.826198 | 3.093997e-54 | -8.615850e-47 |
| Msa0587620 | Msa1096970 | 0.831414 | 1.691706e-55 | -8.615850e-47 |
| Msa0587620 | Msa1105640 | 0.870315 | 1.601807e-66 | -8.615850e-47 |
| Msa0587620 | Msa1105780 | 0.825478 | 4.586549e-54 | -8.615850e-47 |
| Msa0587620 | Msa1113340 | 0.810484 | 1.126503e-50 | -8.615850e-47 |
| Msa0587620 | Msa1116220 | 0.806164 | 9.393857e-50 | -8.615850e-47 |
| Msa0587620 | Msa1123970 | 0.803498 | 3.387980e-49 | -8.615850e-47 |
| Msa0587620 | Msa1132840 | 0.851060 | 1.134676e-60 | -8.615850e-47 |
| Msa0587620 | Msa1140210 | 0.815248 | 1.018695e-51 | -8.615850e-47 |
| Msa0587620 | Msa1140220 | 0.817886 | 2.612498e-52 | -8.615850e-47 |
| Msa0587620 | Msa1148960 | 0.852566 | 4.245551e-61 | -8.615850e-47 |
| Msa0587620 | Msa1155170 | -0.807979 | 3.880123e-50 | -8.615850e-47 |
| Msa0587620 | Msa1160920 | 0.821653 | 3.601988e-53 | -8.615850e-47 |
| Msa0587620 | Msa1161680 | 0.806442 | 8.208631e-50 | -8.615850e-47 |
| Msa0587620 | Msa1167470 | 0.864377 | 1.270601e-64 | -8.615850e-47 |
| Msa0587620 | Msa1186020 | 0.826972 | 2.022281e-54 | -8.615850e-47 |
| Msa0587620 | Msa1196450 | 0.804264 | 2.347715e-49 | -8.615850e-47 |
| Msa0587620 | Msa1200890 | 0.815751 | 7.873381e-52 | -8.615850e-47 |
| Msa0587620 | Msa1204040 | 0.806967 | 6.358846e-50 | -8.615850e-47 |
| Msa0587620 | Msa1205280 | 0.819953 | 8.858797e-53 | -8.615850e-47 |
| Msa0587620 | Msa1206460 | 0.835248 | 1.874569e-56 | -8.615850e-47 |
| Msa0587620 | Msa1208950 | 0.810760 | 9.818097e-51 | -8.615850e-47 |
| Msa0587620 | Msa1216090 | 0.814110 | 1.820339e-51 | -8.615850e-47 |
| Msa0587620 | Msa1216110 | 0.857043 | 2.135748e-62 | -8.615850e-47 |
| Msa0587620 | Msa1216360 | 0.809562 | 1.779612e-50 | -8.615850e-47 |
| Msa0587620 | Msa1217210 | 0.808627 | 2.822794e-50 | -8.615850e-47 |
| Msa0587620 | Msa1224930 | 0.823610 | 1.262227e-53 | -8.615850e-47 |
| Msa0587620 | Msa1225860 | -0.803934 | 2.750343e-49 | -8.615850e-47 |
| Msa0587620 | Msa1226520 | 0.824789 | 6.672280e-54 | -8.615850e-47 |
| Msa0587620 | Msa1228200 | 0.801265 | 9.769778e-49 | -8.615850e-47 |
| Msa0587620 | Msa1240770 | 0.841602 | 4.302152e-58 | -8.615850e-47 |
| Msa0587620 | Msa1265650 | 0.828488 | 8.745507e-55 | -8.615850e-47 |
| Msa0587620 | Msa1277220 | 0.822973 | 1.778530e-53 | -8.615850e-47 |
| Msa0587620 | Msa1277640 | 0.817154 | 3.820447e-52 | -8.615850e-47 |
| Msa0587620 | Msa1282260 | 0.839953 | 1.163536e-57 | -8.615850e-47 |
| Msa0587620 | Msa1297230 | 0.841950 | 3.482124e-58 | -8.615850e-47 |
| Msa0587620 | Msa1298220 | 0.817560 | 3.096005e-52 | -8.615850e-47 |
| Msa0587620 | Msa1303560 | 0.836336 | 9.932555e-57 | -8.615850e-47 |
| Msa0587620 | Msa1303650 | 0.841394 | 4.879049e-58 | -8.615850e-47 |
| Msa0587620 | Msa1315160 | 0.805154 | 1.531056e-49 | -8.615850e-47 |
| Msa0587620 | Msa1316330 | 0.804744 | 1.864925e-49 | -8.615850e-47 |
| Msa0587620 | Msa1321340 | 0.848642 | 5.382725e-60 | -8.615850e-47 |
| Msa0587620 | Msa1343170 | 0.808288 | 3.333455e-50 | -8.615850e-47 |
| Msa0587620 | Msa1343180 | 0.809192 | 2.137056e-50 | -8.615850e-47 |
| Msa0587620 | Msa1343430 | 0.852478 | 4.496475e-61 | -8.615850e-47 |
| Msa0587620 | Msa1346560 | 0.814739 | 1.321597e-51 | -8.615850e-47 |
| Msa0587620 | Msa1359690 | 0.844165 | 8.948734e-59 | -8.615850e-47 |
| Msa0587620 | Msa1372040 | 0.821472 | 3.965400e-53 | -8.615850e-47 |
| Msa0587620 | Msa1384460 | 0.817362 | 3.429314e-52 | -8.615850e-47 |
| Msa0587620 | Msa1390440 | 0.825857 | 3.728463e-54 | -8.615850e-47 |
| Msa0587620 | Msa1392580 | 0.824776 | 6.718256e-54 | -8.615850e-47 |
| Msa0587620 | Msa1393780 | 0.862047 | 6.680355e-64 | -8.615850e-47 |
| Msa0587620 | Msa1405460 | 0.835656 | 1.477723e-56 | -8.615850e-47 |
| Msa0587620 | Msa1409410 | 0.830873 | 2.298491e-55 | -8.615850e-47 |
| Msa0587620 | Msa1412000 | 0.800186 | 1.622065e-48 | -8.615850e-47 |
| Msa0587620 | Msa1413690 | 0.818721 | 1.691002e-52 | -8.615850e-47 |
| Msa0587620 | Msa1415540 | 0.842773 | 2.106697e-58 | -8.615850e-47 |
| Msa0587620 | Msa1420950 | 0.810775 | 9.747149e-51 | -8.615850e-47 |
| Msa0587620 | Msa1427100 | 0.800616 | 1.325691e-48 | -8.615850e-47 |
| Msa0587620 | Msa1432500 | 0.813028 | 3.149191e-51 | -8.615850e-47 |
| Msa0587620 | Msa1437930 | 0.801096 | 1.057916e-48 | -8.615850e-47 |
| Msa0587620 | Msa1440630 | 0.855712 | 5.250041e-62 | -8.615850e-47 |
| Msa0587620 | Msa1440960 | 0.854893 | 9.087248e-62 | -8.615850e-47 |
| Msa0587620 | Msa1446810 | 0.802370 | 5.795164e-49 | -8.615850e-47 |
| Msa0587620 | Msa1449480 | 0.803021 | 4.253458e-49 | -8.615850e-47 |
| Msa0587620 | Msa1450100 | 0.802670 | 5.025296e-49 | -8.615850e-47 |
| Msa0587620 | Msa1451160 | 0.800296 | 1.540172e-48 | -8.615850e-47 |
| Msa0587620 | Msa1452140 | 0.816097 | 6.591580e-52 | -8.615850e-47 |
| Msa0587620 | Msa1454140 | 0.840293 | 9.487725e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0587620 | MtrunA17_Chr4g0003701 | 98.639 | 147 | 2 | 0 | 1 | 147 | 1 | 147 | 3.07e-104 | 294 |
| Msa0587620 | MtrunA17_Chr3g0138031 | 60.248 | 161 | 49 | 5 | 1 | 146 | 1 | 161 | 1.80e-56 | 174 |
| Msa0587620 | MtrunA17_Chr4g0063351 | 47.552 | 143 | 60 | 3 | 5 | 145 | 6 | 135 | 3.88e-41 | 134 |
| Msa0587620 | MtrunA17_Chr2g0306881 | 44.286 | 140 | 55 | 2 | 5 | 144 | 6 | 122 | 9.16e-36 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0587620 | AT3G15680.2 | 62.893 | 159 | 43 | 5 | 1 | 145 | 1 | 157 | 5.17e-59 | 180 |
| Msa0587620 | AT3G15680.1 | 62.893 | 159 | 43 | 5 | 1 | 145 | 1 | 157 | 5.17e-59 | 180 |
| Msa0587620 | AT5G25490.2 | 53.374 | 163 | 58 | 4 | 1 | 145 | 1 | 163 | 7.20e-48 | 152 |
| Msa0587620 | AT5G25490.1 | 53.374 | 163 | 58 | 4 | 1 | 145 | 1 | 163 | 7.20e-48 | 152 |
| Msa0587620 | AT2G26695.1 | 47.518 | 141 | 62 | 3 | 5 | 145 | 6 | 134 | 6.48e-41 | 134 |
| Msa0587620 | AT2G26695.2 | 47.518 | 141 | 62 | 3 | 5 | 145 | 6 | 134 | 6.48e-41 | 134 |
| Msa0587620 | AT2G17975.1 | 29.448 | 163 | 74 | 5 | 3 | 141 | 5 | 150 | 1.99e-12 | 63.2 |
Find 48 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGGCTATGATTTCTAAAA+AGG | 0.229591 | 4_2:-9249881 | Msa0587620:three_prime_UTR |
| AATCTAAAGAAGAACCTAAT+TGG | 0.237347 | 4_2:+9249821 | None:intergenic |
| CCTACTCATGTTTACTCCTT+TGG | 0.289512 | 4_2:+9251306 | None:intergenic |
| AGAGAAACCACATCCCAATT+AGG | 0.321163 | 4_2:-9249835 | Msa0587620:three_prime_UTR |
| GTTGATTATGGATCAATGTT+TGG | 0.349697 | 4_2:-9251190 | Msa0587620:CDS |
| CAGATGTTCGTTTAGGTGAT+TGG | 0.350670 | 4_2:-9251129 | Msa0587620:CDS |
| TCAATGTTTGGAGGAATTAG+AGG | 0.355368 | 4_2:-9251178 | Msa0587620:CDS |
| TATGGAGACAGAGTTGATTA+TGG | 0.373749 | 4_2:-9251202 | Msa0587620:CDS |
| AGATGCGGCGATTCAAAGTA+TGG | 0.375499 | 4_2:-9251220 | Msa0587620:CDS |
| TGGATAATCTCATTTCTAGT+AGG | 0.375928 | 4_2:+9249963 | None:intergenic |
| AGTGGTTCAGATGTTCGTTT+AGG | 0.376339 | 4_2:-9251136 | Msa0587620:CDS |
| ATTAGAGGAGGATCTTCATT+TGG | 0.405594 | 4_2:-9251163 | Msa0587620:CDS |
| ACTAGACCTGGATGGAAATC+TGG | 0.411392 | 4_2:-9250965 | Msa0587620:CDS |
| CATTTCTAGTAGGTGTCTCT+TGG | 0.424094 | 4_2:+9249973 | None:intergenic |
| ATCTAAAGAAGAACCTAATT+GGG | 0.437732 | 4_2:+9249822 | None:intergenic |
| TTAGTTACTATGGGATGTTA+AGG | 0.438216 | 4_2:-9249899 | Msa0587620:three_prime_UTR |
| CTGGTGATTGGATATGCAAC+AGG | 0.442185 | 4_2:-9250946 | Msa0587620:intron |
| GGTGATTGGTATTGTGGTGC+TGG | 0.443291 | 4_2:-9251115 | Msa0587620:CDS |
| GGATCTTCATTTGGTTTAAG+TGG | 0.449514 | 4_2:-9251154 | Msa0587620:CDS |
| ACATGAGTAGGCCAGGAGAT+TGG | 0.464767 | 4_2:-9251294 | Msa0587620:CDS |
| GACCTGCAGTTCCAATCTCC+TGG | 0.472667 | 4_2:+9251283 | None:intergenic |
| GGAGTAAACATGAGTAGGCC+AGG | 0.482081 | 4_2:-9251301 | Msa0587620:exon |
| CTGGATGGAAATCTGGTGAT+TGG | 0.494361 | 4_2:-9250958 | Msa0587620:CDS |
| TAGAGAGTTCATTTATTGTA+CGG | 0.497541 | 4_2:-9249731 | Msa0587620:three_prime_UTR |
| CAATCACCAGATTTCCATCC+AGG | 0.500432 | 4_2:+9250959 | None:intergenic |
| CAACTTACTTTATTATCTTG+AGG | 0.504437 | 4_2:-9252213 | Msa0587620:intron |
| GCCTTTGAAAGTTCATGTGT+TGG | 0.505941 | 4_2:+9251257 | None:intergenic |
| CGTTTAGGTGATTGGTATTG+TGG | 0.513265 | 4_2:-9251121 | Msa0587620:CDS |
| GGCCAGGAGATTGGAACTGC+AGG | 0.518043 | 4_2:-9251285 | Msa0587620:CDS |
| TTCATTTATTGTACGGTGCG+TGG | 0.518267 | 4_2:-9249724 | Msa0587620:three_prime_UTR |
| GAGATAGAGAAGCTGAAAGA+GGG | 0.521835 | 4_2:+9252244 | None:intergenic |
| AGAGATAGAGAAGCTGAAAG+AGG | 0.532133 | 4_2:+9252243 | None:intergenic |
| AGAAGAACCTAATTGGGATG+TGG | 0.538087 | 4_2:+9249828 | None:intergenic |
| TATTGTGGTGCTGGTAATTG+TGG | 0.545221 | 4_2:-9251106 | Msa0587620:CDS |
| GCACAACTTTGCTAGCAGAA+TGG | 0.551339 | 4_2:-9250016 | Msa0587620:CDS |
| GCCAACACATGAACTTTCAA+AGG | 0.552763 | 4_2:-9251258 | Msa0587620:CDS |
| GATTATGGATCAATGTTTGG+AGG | 0.560419 | 4_2:-9251187 | Msa0587620:CDS |
| AAAGATGACCTAGCTGGTGG+AGG | 0.570316 | 4_2:-9251034 | Msa0587620:CDS |
| CGTTTAAGTTGCTTCAAATG+TGG | 0.570358 | 4_2:-9251064 | Msa0587620:CDS |
| TATTATATCCTCCACCAGCT+AGG | 0.570596 | 4_2:+9251026 | None:intergenic |
| CCAAAGGAGTAAACATGAGT+AGG | 0.578304 | 4_2:-9251306 | Msa0587620:exon |
| ATGAAACAGTAATTTGCCAA+AGG | 0.594719 | 4_2:-9251322 | Msa0587620:intron |
| GCTTTCAAAGATGACCTAGC+TGG | 0.598108 | 4_2:-9251040 | Msa0587620:CDS |
| TTCAAAGATGACCTAGCTGG+TGG | 0.604459 | 4_2:-9251037 | Msa0587620:CDS |
| CGCGAATCGTGTCAAAGATG+CGG | 0.609881 | 4_2:-9251235 | Msa0587620:CDS |
| TTTGGTGGAAGTACTAGACC+TGG | 0.615938 | 4_2:-9250977 | Msa0587620:CDS |
| ATGTTTGGAGGAATTAGAGG+AGG | 0.639273 | 4_2:-9251175 | Msa0587620:CDS |
| GTGGAAGTACTAGACCTGGA+TGG | 0.644858 | 4_2:-9250973 | Msa0587620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAAAATGAAGTTA+CGG | + | chr4_2:9249985-9250004 | None:intergenic | 10.0% |
| !!! | TTTTTATATATTTGTTCATA+TGG | - | chr4_2:9249998-9250017 | Msa0587620:CDS | 10.0% |
| !! | TAGTAATTAATATTATAAAG+TGG | - | chr4_2:9251242-9251261 | Msa0587620:CDS | 10.0% |
| !!! | TATCTTTAATGTTTTTTTTT+AGG | - | chr4_2:9251303-9251322 | Msa0587620:exon | 10.0% |
| !!! | ATCTTTAATGTTTTTTTTTA+GGG | - | chr4_2:9251304-9251323 | Msa0587620:exon | 10.0% |
| !!! | ATAGAAGATTTTTTAGTAAA+TGG | + | chr4_2:9249862-9249881 | None:intergenic | 15.0% |
| !! | AAAATAGCAATTAATGATTA+TGG | - | chr4_2:9250164-9250183 | Msa0587620:intron | 15.0% |
| !!! | ACATTTTTGTTTTATAACTA+TGG | - | chr4_2:9250379-9250398 | Msa0587620:intron | 15.0% |
| !! | AATATTATAAAGTGGTAAAT+TGG | - | chr4_2:9251250-9251269 | Msa0587620:CDS | 15.0% |
| !!! | TCTTTAATGTTTTTTTTTAG+GGG | - | chr4_2:9251305-9251324 | Msa0587620:exon | 15.0% |
| !! | TAGTACATATAATTAAAACA+AGG | - | chr4_2:9251587-9251606 | Msa0587620:intron | 15.0% |
| !! | AGTACATATAATTAAAACAA+GGG | - | chr4_2:9251588-9251607 | Msa0587620:intron | 15.0% |
| !!! | ATTTTCTTTATTAGTTACTA+TGG | - | chr4_2:9252031-9252050 | Msa0587620:intron | 15.0% |
| !!! | TTTTCTTTATTAGTTACTAT+GGG | - | chr4_2:9252032-9252051 | Msa0587620:intron | 15.0% |
| !!! | AACATTGTTATAGTTTTAAA+GGG | + | chr4_2:9252146-9252165 | None:intergenic | 15.0% |
| !!! | TGGAGAATAATAGAAAATTT+TGG | + | chr4_2:9249816-9249835 | None:intergenic | 20.0% |
| !! | ATAATTGACAAGATTAACAT+TGG | + | chr4_2:9249836-9249855 | None:intergenic | 20.0% |
| !!! | TTTGTTTTATATTACTTGCT+TGG | - | chr4_2:9250312-9250331 | Msa0587620:intron | 20.0% |
| !! | ATTGATATTACTAATTGTGT+CGG | - | chr4_2:9251053-9251072 | Msa0587620:CDS | 20.0% |
| !!! | TAGTAGTATCTTTTGATTAT+TGG | - | chr4_2:9251384-9251403 | Msa0587620:intron | 20.0% |
| !! | ATATCACAATTTATCCATTT+GGG | + | chr4_2:9251719-9251738 | None:intergenic | 20.0% |
| !!! | TAATTCATCATTTTCAATGT+AGG | - | chr4_2:9251826-9251845 | Msa0587620:intron | 20.0% |
| !!! | CATATTTTTATCACAAGTAA+TGG | + | chr4_2:9251865-9251884 | None:intergenic | 20.0% |
| !!! | CAACATTGTTATAGTTTTAA+AGG | + | chr4_2:9252147-9252166 | None:intergenic | 20.0% |
| ! | CAACTTACTTTATTATCTTG+AGG | - | chr4_2:9249727-9249746 | Msa0587620:three_prime_UTR | 25.0% |
| !! | AATTTTCCCTACATAATCAT+TGG | + | chr4_2:9250111-9250130 | None:intergenic | 25.0% |
| ! | CAACATTTATGATTCATACA+CGG | - | chr4_2:9250569-9250588 | Msa0587620:intron | 25.0% |
| ! | AAACGCATCTATATACAAAA+AGG | - | chr4_2:9251094-9251113 | Msa0587620:CDS | 25.0% |
| ! | AACGCATCTATATACAAAAA+GGG | - | chr4_2:9251095-9251114 | Msa0587620:CDS | 25.0% |
| ! | AGAAAAGAGACGTATAATAA+GGG | - | chr4_2:9251182-9251201 | Msa0587620:CDS | 25.0% |
| !! | TTTGACTTCTACTTTGAATA+TGG | - | chr4_2:9251556-9251575 | Msa0587620:intron | 25.0% |
| ! | GATATCACAATTTATCCATT+TGG | + | chr4_2:9251720-9251739 | None:intergenic | 25.0% |
| !! | TTCTTTCTTTTGAACAGATT+AGG | - | chr4_2:9251892-9251911 | Msa0587620:intron | 25.0% |
| !! | TAAGGCTATGATTTCTAAAA+AGG | - | chr4_2:9252059-9252078 | Msa0587620:intron | 25.0% |
| ! | ATCTAAAGAAGAACCTAATT+GGG | + | chr4_2:9252121-9252140 | None:intergenic | 25.0% |
| ! | AATCTAAAGAAGAACCTAAT+TGG | + | chr4_2:9252122-9252141 | None:intergenic | 25.0% |
| ! | TAGAGAGTTCATTTATTGTA+CGG | - | chr4_2:9252209-9252228 | Msa0587620:intron | 25.0% |
| TGTGAGTGAAAGAAAAATGA+GGG | + | chr4_2:9249784-9249803 | None:intergenic | 30.0% | |
| ATGTGAGTGAAAGAAAAATG+AGG | + | chr4_2:9249785-9249804 | None:intergenic | 30.0% | |
| ATGATTGAAGATTATGTGAC+AGG | + | chr4_2:9249895-9249914 | None:intergenic | 30.0% | |
| AAACTACAAAGCAAGTTATG+AGG | + | chr4_2:9249948-9249967 | None:intergenic | 30.0% | |
| TAATGAGCCAATGATTATGT+AGG | - | chr4_2:9250101-9250120 | Msa0587620:intron | 30.0% | |
| AATGAGCCAATGATTATGTA+GGG | - | chr4_2:9250102-9250121 | Msa0587620:intron | 30.0% | |
| TGTAGGGAAAATTTCAACTT+TGG | - | chr4_2:9250118-9250137 | Msa0587620:intron | 30.0% | |
| ATTTACGTTGTACGAAAAAG+AGG | - | chr4_2:9250203-9250222 | Msa0587620:intron | 30.0% | |
| TACGAAAAAGAGGTAAAAAG+TGG | - | chr4_2:9250213-9250232 | Msa0587620:intron | 30.0% | |
| AAACATTGATGTGACATACT+TGG | - | chr4_2:9250272-9250291 | Msa0587620:intron | 30.0% | |
| AAACATTGATGTGACATACT+TGG | - | chr4_2:9250272-9250291 | Msa0587620:intron | 30.0% | |
| AGAGTTCTATAATCACTCAT+CGG | + | chr4_2:9250455-9250474 | None:intergenic | 30.0% | |
| !! | TAATAGATATAGTGCTGACT+TGG | + | chr4_2:9250522-9250541 | None:intergenic | 30.0% |
| ! | ATGAAACAGTAATTTGCCAA+AGG | - | chr4_2:9250618-9250637 | Msa0587620:intron | 30.0% |
| GTTGATTATGGATCAATGTT+TGG | - | chr4_2:9250750-9250769 | Msa0587620:intron | 30.0% | |
| ! | ATTTTGCTTTCAAGAGGTTT+TGG | - | chr4_2:9250945-9250964 | Msa0587620:intron | 30.0% |
| GAGAAAAGAGACGTATAATA+AGG | - | chr4_2:9251181-9251200 | Msa0587620:CDS | 30.0% | |
| !! | TTGATTATTGGTTCCAAATG+AGG | - | chr4_2:9251396-9251415 | Msa0587620:intron | 30.0% |
| !! | TGATTATTGGTTCCAAATGA+GGG | - | chr4_2:9251397-9251416 | Msa0587620:intron | 30.0% |
| ! | ACTTCAAGTTCAAACTCAAA+GGG | + | chr4_2:9251451-9251470 | None:intergenic | 30.0% |
| ! | AACTTCAAGTTCAAACTCAA+AGG | + | chr4_2:9251452-9251471 | None:intergenic | 30.0% |
| ATACAAACCAAAGGAAATGA+TGG | - | chr4_2:9251490-9251509 | Msa0587620:intron | 30.0% | |
| TACAAACCAAAGGAAATGAT+GGG | - | chr4_2:9251491-9251510 | Msa0587620:intron | 30.0% | |
| AAAGTAGAAGTCAAAGAAAG+AGG | + | chr4_2:9251551-9251570 | None:intergenic | 30.0% | |
| !!! | AGTGAAGTCGCTTTTTATTT+TGG | - | chr4_2:9251686-9251705 | Msa0587620:intron | 30.0% |
| !! | TGGATAATCTCATTTCTAGT+AGG | + | chr4_2:9251980-9251999 | None:intergenic | 30.0% |
| !!! | AATCTCTAGTCTTTTTTGCT+TGG | + | chr4_2:9252000-9252019 | None:intergenic | 30.0% |
| TTAGTTACTATGGGATGTTA+AGG | - | chr4_2:9252041-9252060 | Msa0587620:intron | 30.0% | |
| TGAGTGAAAGAAAAATGAGG+GGG | + | chr4_2:9249782-9249801 | None:intergenic | 35.0% | |
| GTGAGTGAAAGAAAAATGAG+GGG | + | chr4_2:9249783-9249802 | None:intergenic | 35.0% | |
| ! | TGTGTCCAAGCAAGTAATTT+TGG | + | chr4_2:9250248-9250267 | None:intergenic | 35.0% |
| ! | TATGGAGACAGAGTTGATTA+TGG | - | chr4_2:9250738-9250757 | Msa0587620:intron | 35.0% |
| GATTATGGATCAATGTTTGG+AGG | - | chr4_2:9250753-9250772 | Msa0587620:intron | 35.0% | |
| TCAATGTTTGGAGGAATTAG+AGG | - | chr4_2:9250762-9250781 | Msa0587620:intron | 35.0% | |
| ATTAGAGGAGGATCTTCATT+TGG | - | chr4_2:9250777-9250796 | Msa0587620:intron | 35.0% | |
| ! | GGATCTTCATTTGGTTTAAG+TGG | - | chr4_2:9250786-9250805 | Msa0587620:intron | 35.0% |
| !! | CGTTTAAGTTGCTTCAAATG+TGG | - | chr4_2:9250876-9250895 | Msa0587620:intron | 35.0% |
| ! | AGTGACATTTTGCTTTCAAG+AGG | - | chr4_2:9250939-9250958 | Msa0587620:intron | 35.0% |
| TTTGTCATCTTGTCATCTTG+TGG | - | chr4_2:9251211-9251230 | Msa0587620:CDS | 35.0% | |
| !! | GATTATTGGTTCCAAATGAG+GGG | - | chr4_2:9251398-9251417 | Msa0587620:intron | 35.0% |
| TGACATGTGATACAAACCAA+AGG | - | chr4_2:9251481-9251500 | Msa0587620:intron | 35.0% | |
| ACAAACCAAAGGAAATGATG+GGG | - | chr4_2:9251492-9251511 | Msa0587620:intron | 35.0% | |
| !!! | GAAGTCGCTTTTTATTTTGG+TGG | - | chr4_2:9251689-9251708 | Msa0587620:intron | 35.0% |
| !!! | TCGCTTTTTATTTTGGTGGA+TGG | - | chr4_2:9251693-9251712 | Msa0587620:intron | 35.0% |
| ! | GGCTATGATTTCTAAAAAGG+TGG | - | chr4_2:9252062-9252081 | Msa0587620:intron | 35.0% |
| GAGATAGAGAAGCTGAAAGA+GGG | + | chr4_2:9249699-9249718 | None:intergenic | 40.0% | |
| AGAGATAGAGAAGCTGAAAG+AGG | + | chr4_2:9249700-9249719 | None:intergenic | 40.0% | |
| TGCGACCAAAATTACTTGCT+TGG | - | chr4_2:9250240-9250259 | Msa0587620:intron | 40.0% | |
| CCTACTCATGTTTACTCCTT+TGG | + | chr4_2:9250637-9250656 | None:intergenic | 40.0% | |
| CCAAAGGAGTAAACATGAGT+AGG | - | chr4_2:9250634-9250653 | Msa0587620:intron | 40.0% | |
| GCCAACACATGAACTTTCAA+AGG | - | chr4_2:9250682-9250701 | Msa0587620:intron | 40.0% | |
| ! | GCCTTTGAAAGTTCATGTGT+TGG | + | chr4_2:9250686-9250705 | None:intergenic | 40.0% |
| ATGTTTGGAGGAATTAGAGG+AGG | - | chr4_2:9250765-9250784 | Msa0587620:intron | 40.0% | |
| AGTGGTTCAGATGTTCGTTT+AGG | - | chr4_2:9250804-9250823 | Msa0587620:intron | 40.0% | |
| CAGATGTTCGTTTAGGTGAT+TGG | - | chr4_2:9250811-9250830 | Msa0587620:intron | 40.0% | |
| CGTTTAGGTGATTGGTATTG+TGG | - | chr4_2:9250819-9250838 | Msa0587620:intron | 40.0% | |
| !! | TATTGTGGTGCTGGTAATTG+TGG | - | chr4_2:9250834-9250853 | Msa0587620:intron | 40.0% |
| TATTATATCCTCCACCAGCT+AGG | + | chr4_2:9250917-9250936 | None:intergenic | 40.0% | |
| !! | TTGCTTTCAAGAGGTTTTGG+TGG | - | chr4_2:9250948-9250967 | Msa0587620:CDS | 40.0% |
| AGCAGGAAAGCAAAAAGCAA+AGG | + | chr4_2:9251428-9251447 | None:intergenic | 40.0% | |
| ! | AAAGGAAATGATGGGGTTGT+GGG | - | chr4_2:9251499-9251518 | Msa0587620:intron | 40.0% |
| !! | CATTTCTAGTAGGTGTCTCT+TGG | + | chr4_2:9251970-9251989 | None:intergenic | 40.0% |
| AGAGAAACCACATCCCAATT+AGG | - | chr4_2:9252105-9252124 | Msa0587620:intron | 40.0% | |
| AGAAGAACCTAATTGGGATG+TGG | + | chr4_2:9252115-9252134 | None:intergenic | 40.0% | |
| TTCATTTATTGTACGGTGCG+TGG | - | chr4_2:9252216-9252235 | Msa0587620:five_prime_UTR | 40.0% | |
| GAGGTGGAAGAGTTAAAGAG+TGG | + | chr4_2:9250494-9250513 | None:intergenic | 45.0% | |
| !! | TAGTGCTGACTTGGTGATTG+AGG | + | chr4_2:9250513-9250532 | None:intergenic | 45.0% |
| AGATGCGGCGATTCAAAGTA+TGG | - | chr4_2:9250720-9250739 | Msa0587620:intron | 45.0% | |
| GCTTTCAAAGATGACCTAGC+TGG | - | chr4_2:9250900-9250919 | Msa0587620:intron | 45.0% | |
| TTCAAAGATGACCTAGCTGG+TGG | - | chr4_2:9250903-9250922 | Msa0587620:intron | 45.0% | |
| !! | TTTGGTGGAAGTACTAGACC+TGG | - | chr4_2:9250963-9250982 | Msa0587620:CDS | 45.0% |
| ACTAGACCTGGATGGAAATC+TGG | - | chr4_2:9250975-9250994 | Msa0587620:CDS | 45.0% | |
| CAATCACCAGATTTCCATCC+AGG | + | chr4_2:9250984-9251003 | None:intergenic | 45.0% | |
| CTGGATGGAAATCTGGTGAT+TGG | - | chr4_2:9250982-9251001 | Msa0587620:CDS | 45.0% | |
| CTGGTGATTGGATATGCAAC+AGG | - | chr4_2:9250994-9251013 | Msa0587620:CDS | 45.0% | |
| AGTTCAAACTCAAAGGGAGC+AGG | + | chr4_2:9251445-9251464 | None:intergenic | 45.0% | |
| CACAACCCCATCATTTCCTT+TGG | + | chr4_2:9251500-9251519 | None:intergenic | 45.0% | |
| ! | CAAAGGAAATGATGGGGTTG+TGG | - | chr4_2:9251498-9251517 | Msa0587620:intron | 45.0% |
| !! | ATTTTGGTGGATGGCCCAAA+TGG | - | chr4_2:9251702-9251721 | Msa0587620:intron | 45.0% |
| GCACAACTTTGCTAGCAGAA+TGG | - | chr4_2:9251924-9251943 | Msa0587620:intron | 45.0% | |
| !! | TGCTGACTTGGTGATTGAGG+TGG | + | chr4_2:9250510-9250529 | None:intergenic | 50.0% |
| GGAGTAAACATGAGTAGGCC+AGG | - | chr4_2:9250639-9250658 | Msa0587620:intron | 50.0% | |
| ACATGAGTAGGCCAGGAGAT+TGG | - | chr4_2:9250646-9250665 | Msa0587620:intron | 50.0% | |
| CGCGAATCGTGTCAAAGATG+CGG | - | chr4_2:9250705-9250724 | Msa0587620:intron | 50.0% | |
| GGTGATTGGTATTGTGGTGC+TGG | - | chr4_2:9250825-9250844 | Msa0587620:intron | 50.0% | |
| AAAGATGACCTAGCTGGTGG+AGG | - | chr4_2:9250906-9250925 | Msa0587620:intron | 50.0% | |
| !! | GTGGAAGTACTAGACCTGGA+TGG | - | chr4_2:9250967-9250986 | Msa0587620:CDS | 50.0% |
| GCAAAGGTTGTCCCCTCATT+TGG | + | chr4_2:9251412-9251431 | None:intergenic | 50.0% | |
| GACCTGCAGTTCCAATCTCC+TGG | + | chr4_2:9250660-9250679 | None:intergenic | 55.0% | |
| GGCCAGGAGATTGGAACTGC+AGG | - | chr4_2:9250655-9250674 | Msa0587620:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 9249686 | 9252276 | 9249686 | ID=Msa0587620;Name=Msa0587620 |
| chr4_2 | mRNA | 9249686 | 9252276 | 9249686 | ID=Msa0587620-mRNA-1;Parent=Msa0587620;Name=Msa0587620-mRNA-1;_AED=0.04;_eAED=0.04;_QI=84|1|1|1|0.5|0.33|3|292|147 |
| chr4_2 | exon | 9249686 | 9250053 | 9249686 | ID=Msa0587620-mRNA-1:exon:2536;Parent=Msa0587620-mRNA-1 |
| chr4_2 | exon | 9250947 | 9251335 | 9250947 | ID=Msa0587620-mRNA-1:exon:2535;Parent=Msa0587620-mRNA-1 |
| chr4_2 | exon | 9252214 | 9252276 | 9252214 | ID=Msa0587620-mRNA-1:exon:2534;Parent=Msa0587620-mRNA-1 |
| chr4_2 | five_prime_UTR | 9252214 | 9252276 | 9252214 | ID=Msa0587620-mRNA-1:five_prime_utr;Parent=Msa0587620-mRNA-1 |
| chr4_2 | five_prime_UTR | 9251315 | 9251335 | 9251315 | ID=Msa0587620-mRNA-1:five_prime_utr;Parent=Msa0587620-mRNA-1 |
| chr4_2 | CDS | 9250947 | 9251314 | 9250947 | ID=Msa0587620-mRNA-1:cds;Parent=Msa0587620-mRNA-1 |
| chr4_2 | CDS | 9249978 | 9250053 | 9249978 | ID=Msa0587620-mRNA-1:cds;Parent=Msa0587620-mRNA-1 |
| chr4_2 | three_prime_UTR | 9249686 | 9249977 | 9249686 | ID=Msa0587620-mRNA-1:three_prime_utr;Parent=Msa0587620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
