Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081690 | XP_024626987.1 | 99.046 | 629 | 6 | 0 | 1 | 629 | 1 | 629 | 0.0 | 1284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081690 | sp|Q9SA69|Y1301_ARATH | 68.837 | 645 | 174 | 9 | 1 | 629 | 1 | 634 | 0.0 | 862 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081690 | A0A396HDB7 | 99.046 | 629 | 6 | 0 | 1 | 629 | 1 | 629 | 0.0 | 1284 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002580 | Msa1081690 | 0.816511 | 5.326260e-52 | -8.615850e-47 |
| Msa0003080 | Msa1081690 | 0.835873 | 1.302328e-56 | -8.615850e-47 |
| Msa0008040 | Msa1081690 | 0.825213 | 5.299022e-54 | -8.615850e-47 |
| Msa0015150 | Msa1081690 | 0.821865 | 3.216498e-53 | -8.615850e-47 |
| Msa0017670 | Msa1081690 | 0.807222 | 5.615379e-50 | -8.615850e-47 |
| Msa0025160 | Msa1081690 | 0.865728 | 4.784741e-65 | -8.615850e-47 |
| Msa0025580 | Msa1081690 | 0.825229 | 5.252900e-54 | -8.615850e-47 |
| Msa0027280 | Msa1081690 | 0.814446 | 1.534482e-51 | -8.615850e-47 |
| Msa0029970 | Msa1081690 | 0.803904 | 2.790091e-49 | -8.615850e-47 |
| Msa0032460 | Msa1081690 | 0.817270 | 3.596866e-52 | -8.615850e-47 |
| Msa0034210 | Msa1081690 | 0.838063 | 3.592655e-57 | -8.615850e-47 |
| Msa0035270 | Msa1081690 | 0.805451 | 1.326568e-49 | -8.615850e-47 |
| Msa0035340 | Msa1081690 | 0.829070 | 6.322603e-55 | -8.615850e-47 |
| Msa0035380 | Msa1081690 | 0.831255 | 1.851596e-55 | -8.615850e-47 |
| Msa0042640 | Msa1081690 | 0.801009 | 1.102258e-48 | -8.615850e-47 |
| Msa0048510 | Msa1081690 | 0.811357 | 7.291250e-51 | -8.615850e-47 |
| Msa0050660 | Msa1081690 | 0.868594 | 5.813248e-66 | -8.615850e-47 |
| Msa0050700 | Msa1081690 | 0.870659 | 1.234836e-66 | -8.615850e-47 |
| Msa0050790 | Msa1081690 | 0.866039 | 3.814185e-65 | -8.615850e-47 |
| Msa0071850 | Msa1081690 | 0.825276 | 5.120673e-54 | -8.615850e-47 |
| Msa0071860 | Msa1081690 | 0.829319 | 5.502240e-55 | -8.615850e-47 |
| Msa0072520 | Msa1081690 | 0.846419 | 2.198300e-59 | -8.615850e-47 |
| Msa0073120 | Msa1081690 | 0.836710 | 7.976888e-57 | -8.615850e-47 |
| Msa0090400 | Msa1081690 | 0.811959 | 5.392137e-51 | -8.615850e-47 |
| Msa0108880 | Msa1081690 | 0.831576 | 1.543199e-55 | -8.615850e-47 |
| Msa0605560 | Msa1081690 | 0.842668 | 2.246172e-58 | -8.615850e-47 |
| Msa0616210 | Msa1081690 | 0.855696 | 5.303858e-62 | -8.615850e-47 |
| Msa0619710 | Msa1081690 | 0.840358 | 9.125059e-58 | -8.615850e-47 |
| Msa0621710 | Msa1081690 | 0.814189 | 1.748619e-51 | -8.615850e-47 |
| Msa0640200 | Msa1081690 | 0.800157 | 1.643834e-48 | -8.615850e-47 |
| Msa0646510 | Msa1081690 | 0.809395 | 1.932771e-50 | -8.615850e-47 |
| Msa0655700 | Msa1081690 | 0.855259 | 7.113506e-62 | -8.615850e-47 |
| Msa0657720 | Msa1081690 | 0.800265 | 1.563255e-48 | -8.615850e-47 |
| Msa0666700 | Msa1081690 | 0.822894 | 1.854985e-53 | -8.615850e-47 |
| Msa0675330 | Msa1081690 | 0.854073 | 1.568485e-61 | -8.615850e-47 |
| Msa0687090 | Msa1081690 | 0.809844 | 1.547672e-50 | -8.615850e-47 |
| Msa0693890 | Msa1081690 | 0.813071 | 3.082107e-51 | -8.615850e-47 |
| Msa0698730 | Msa1081690 | 0.802335 | 5.890493e-49 | -8.615850e-47 |
| Msa0699540 | Msa1081690 | 0.858780 | 6.511683e-63 | -8.615850e-47 |
| Msa0700460 | Msa1081690 | 0.831497 | 1.614703e-55 | -8.615850e-47 |
| Msa0701720 | Msa1081690 | 0.828828 | 7.235760e-55 | -8.615850e-47 |
| Msa0706150 | Msa1081690 | 0.849869 | 2.451603e-60 | -8.615850e-47 |
| Msa0720410 | Msa1081690 | 0.813894 | 2.031009e-51 | -8.615850e-47 |
| Msa0725750 | Msa1081690 | 0.841943 | 3.496887e-58 | -8.615850e-47 |
| Msa0735780 | Msa1081690 | 0.809294 | 2.031644e-50 | -8.615850e-47 |
| Msa0738700 | Msa1081690 | 0.866203 | 3.385625e-65 | -8.615850e-47 |
| Msa0741220 | Msa1081690 | 0.805112 | 1.562476e-49 | -8.615850e-47 |
| Msa0756490 | Msa1081690 | 0.834127 | 3.587744e-56 | -8.615850e-47 |
| Msa0758650 | Msa1081690 | 0.801307 | 9.575724e-49 | -8.615850e-47 |
| Msa0760970 | Msa1081690 | 0.817970 | 2.501903e-52 | -8.615850e-47 |
| Msa0761670 | Msa1081690 | 0.803809 | 2.919428e-49 | -8.615850e-47 |
| Msa0778550 | Msa1081690 | 0.811295 | 7.519432e-51 | -8.615850e-47 |
| Msa0792370 | Msa1081690 | 0.827773 | 1.300192e-54 | -8.615850e-47 |
| Msa0819170 | Msa1081690 | 0.832037 | 1.187971e-55 | -8.615850e-47 |
| Msa0826310 | Msa1081690 | 0.804176 | 2.449386e-49 | -8.615850e-47 |
| Msa0829300 | Msa1081690 | 0.820526 | 6.548860e-53 | -8.615850e-47 |
| Msa0829330 | Msa1081690 | 0.819128 | 1.366679e-52 | -8.615850e-47 |
| Msa0835490 | Msa1081690 | 0.836467 | 9.202096e-57 | -8.615850e-47 |
| Msa0841590 | Msa1081690 | 0.825934 | 3.575818e-54 | -8.615850e-47 |
| Msa0120790 | Msa1081690 | 0.800912 | 1.153354e-48 | -8.615850e-47 |
| Msa0121330 | Msa1081690 | 0.828480 | 8.784213e-55 | -8.615850e-47 |
| Msa0123070 | Msa1081690 | 0.814812 | 1.273270e-51 | -8.615850e-47 |
| Msa0125200 | Msa1081690 | 0.807873 | 4.085908e-50 | -8.615850e-47 |
| Msa0125210 | Msa1081690 | 0.800630 | 1.316929e-48 | -8.615850e-47 |
| Msa0128310 | Msa1081690 | 0.839735 | 1.326090e-57 | -8.615850e-47 |
| Msa0137880 | Msa1081690 | 0.806839 | 6.768334e-50 | -8.615850e-47 |
| Msa0140280 | Msa1081690 | 0.825833 | 3.777344e-54 | -8.615850e-47 |
| Msa0146650 | Msa1081690 | 0.849980 | 2.282276e-60 | -8.615850e-47 |
| Msa0149350 | Msa1081690 | 0.842433 | 2.594055e-58 | -8.615850e-47 |
| Msa0161930 | Msa1081690 | 0.867706 | 1.123173e-65 | -8.615850e-47 |
| Msa0174290 | Msa1081690 | 0.800392 | 1.472792e-48 | -8.615850e-47 |
| Msa0174440 | Msa1081690 | 0.845468 | 3.985527e-59 | -8.615850e-47 |
| Msa0174450 | Msa1081690 | 0.801878 | 7.314691e-49 | -8.615850e-47 |
| Msa0176060 | Msa1081690 | 0.824623 | 7.299822e-54 | -8.615850e-47 |
| Msa0180650 | Msa1081690 | 0.806979 | 6.322604e-50 | -8.615850e-47 |
| Msa0188610 | Msa1081690 | 0.862185 | 6.061997e-64 | -8.615850e-47 |
| Msa0200050 | Msa1081690 | 0.804893 | 1.735481e-49 | -8.615850e-47 |
| Msa0213030 | Msa1081690 | 0.801110 | 1.050886e-48 | -8.615850e-47 |
| Msa0230800 | Msa1081690 | 0.866437 | 2.854034e-65 | -8.615850e-47 |
| Msa0230870 | Msa1081690 | 0.863644 | 2.148839e-64 | -8.615850e-47 |
| Msa0367690 | Msa1081690 | 0.812911 | 3.340660e-51 | -8.615850e-47 |
| Msa0369790 | Msa1081690 | 0.805104 | 1.567908e-49 | -8.615850e-47 |
| Msa0380670 | Msa1081690 | 0.824239 | 8.988995e-54 | -8.615850e-47 |
| Msa0382390 | Msa1081690 | 0.824394 | 8.266186e-54 | -8.615850e-47 |
| Msa0384870 | Msa1081690 | 0.829304 | 5.549271e-55 | -8.615850e-47 |
| Msa0401970 | Msa1081690 | 0.813319 | 2.718357e-51 | -8.615850e-47 |
| Msa0415450 | Msa1081690 | 0.800561 | 1.360585e-48 | -8.615850e-47 |
| Msa0426530 | Msa1081690 | 0.826204 | 3.083988e-54 | -8.615850e-47 |
| Msa0430300 | Msa1081690 | 0.819299 | 1.249094e-52 | -8.615850e-47 |
| Msa0431200 | Msa1081690 | 0.808687 | 2.739672e-50 | -8.615850e-47 |
| Msa0432140 | Msa1081690 | 0.818179 | 2.243438e-52 | -8.615850e-47 |
| Msa0435210 | Msa1081690 | 0.856490 | 3.106316e-62 | -8.615850e-47 |
| Msa0436910 | Msa1081690 | 0.818807 | 1.616392e-52 | -8.615850e-47 |
| Msa0451170 | Msa1081690 | 0.803228 | 3.853860e-49 | -8.615850e-47 |
| Msa0453010 | Msa1081690 | 0.800072 | 1.710643e-48 | -8.615850e-47 |
| Msa0455970 | Msa1081690 | 0.808769 | 2.632037e-50 | -8.615850e-47 |
| Msa0457570 | Msa1081690 | 0.827395 | 1.602328e-54 | -8.615850e-47 |
| Msa0464000 | Msa1081690 | 0.804830 | 1.789669e-49 | -8.615850e-47 |
| Msa0472950 | Msa1081690 | 0.841723 | 3.996412e-58 | -8.615850e-47 |
| Msa0479320 | Msa1081690 | 0.845186 | 4.752196e-59 | -8.615850e-47 |
| Msa1009950 | Msa1081690 | 0.849199 | 3.769159e-60 | -8.615850e-47 |
| Msa1021590 | Msa1081690 | 0.844580 | 6.924752e-59 | -8.615850e-47 |
| Msa1029530 | Msa1081690 | 0.813470 | 2.518945e-51 | -8.615850e-47 |
| Msa1029800 | Msa1081690 | 0.808172 | 3.529913e-50 | -8.615850e-47 |
| Msa1034600 | Msa1081690 | 0.829558 | 4.812601e-55 | -8.615850e-47 |
| Msa1035570 | Msa1081690 | 0.801872 | 7.336797e-49 | -8.615850e-47 |
| Msa1035610 | Msa1081690 | 0.808117 | 3.625025e-50 | -8.615850e-47 |
| Msa1042160 | Msa1081690 | 0.875418 | 3.130803e-68 | -8.615850e-47 |
| Msa1042190 | Msa1081690 | 0.879671 | 1.030136e-69 | -8.615850e-47 |
| Msa1044680 | Msa1081690 | 0.856099 | 4.044731e-62 | -8.615850e-47 |
| Msa1051420 | Msa1081690 | 0.812209 | 4.756836e-51 | -8.615850e-47 |
| Msa1059020 | Msa1081690 | 0.806930 | 6.474316e-50 | -8.615850e-47 |
| Msa1064370 | Msa1081690 | 0.810705 | 1.009265e-50 | -8.615850e-47 |
| Msa1074370 | Msa1081690 | 0.801531 | 8.617334e-49 | -8.615850e-47 |
| Msa1078820 | Msa1081690 | 0.882094 | 1.389192e-70 | -8.615850e-47 |
| Msa1078880 | Msa1081690 | 0.809747 | 1.624248e-50 | -8.615850e-47 |
| Msa1078970 | Msa1081690 | 0.818798 | 1.624008e-52 | -8.615850e-47 |
| Msa1080000 | Msa1081690 | 0.864496 | 1.166214e-64 | -8.615850e-47 |
| Msa1081690 | Msa1082200 | 0.807948 | 3.937790e-50 | -8.615850e-47 |
| Msa1081690 | Msa1105640 | 0.867024 | 1.855360e-65 | -8.615850e-47 |
| Msa1081690 | Msa1116220 | 0.809724 | 1.642864e-50 | -8.615850e-47 |
| Msa1081690 | Msa1121310 | 0.823782 | 1.150864e-53 | -8.615850e-47 |
| Msa1081690 | Msa1123210 | 0.825236 | 5.232767e-54 | -8.615850e-47 |
| Msa1081690 | Msa1123970 | 0.882141 | 1.336068e-70 | -8.615850e-47 |
| Msa1081690 | Msa1125250 | 0.812861 | 3.426005e-51 | -8.615850e-47 |
| Msa1081690 | Msa1148960 | 0.834607 | 2.717701e-56 | -8.615850e-47 |
| Msa1081690 | Msa1166190 | 0.896864 | 2.449635e-76 | -8.615850e-47 |
| Msa1081690 | Msa1166290 | 0.890380 | 1.038683e-73 | -8.615850e-47 |
| Msa1081690 | Msa1167470 | 0.872569 | 2.876516e-67 | -8.615850e-47 |
| Msa1081690 | Msa1169190 | 0.806860 | 6.698897e-50 | -8.615850e-47 |
| Msa1081690 | Msa1169650 | 0.877417 | 6.391918e-69 | -8.615850e-47 |
| Msa1081690 | Msa1187760 | 0.825725 | 4.008256e-54 | -8.615850e-47 |
| Msa1081690 | Msa1216090 | 0.810893 | 9.191821e-51 | -8.615850e-47 |
| Msa1081690 | Msa1216110 | 0.852636 | 4.054820e-61 | -8.615850e-47 |
| Msa1081690 | Msa1226520 | 0.802118 | 6.530254e-49 | -8.615850e-47 |
| Msa1081690 | Msa1240770 | 0.815311 | 9.866117e-52 | -8.615850e-47 |
| Msa1081690 | Msa1263780 | 0.804876 | 1.750331e-49 | -8.615850e-47 |
| Msa1081690 | Msa1265650 | 0.813023 | 3.157393e-51 | -8.615850e-47 |
| Msa1081690 | Msa1296950 | 0.834499 | 2.893622e-56 | -8.615850e-47 |
| Msa1081690 | Msa1303560 | 0.815394 | 9.455143e-52 | -8.615850e-47 |
| Msa1081690 | Msa1303650 | 0.819883 | 9.193003e-53 | -8.615850e-47 |
| Msa1081690 | Msa1315130 | 0.807682 | 4.485385e-50 | -8.615850e-47 |
| Msa1081690 | Msa1315160 | 0.844994 | 5.353725e-59 | -8.615850e-47 |
| Msa1081690 | Msa1321340 | 0.810299 | 1.234946e-50 | -8.615850e-47 |
| Msa1081690 | Msa1343180 | 0.814145 | 1.788564e-51 | -8.615850e-47 |
| Msa1081690 | Msa1372040 | 0.815005 | 1.153682e-51 | -8.615850e-47 |
| Msa1081690 | Msa1381030 | 0.808977 | 2.374991e-50 | -8.615850e-47 |
| Msa1081690 | Msa1384460 | 0.859823 | 3.168760e-63 | -8.615850e-47 |
| Msa1081690 | Msa1393780 | 0.856276 | 3.590275e-62 | -8.615850e-47 |
| Msa1081690 | Msa1405460 | 0.811131 | 8.162177e-51 | -8.615850e-47 |
| Msa1081690 | Msa1409410 | 0.831723 | 1.420445e-55 | -8.615850e-47 |
| Msa1081690 | Msa1410160 | 0.907276 | 6.035464e-81 | -8.615850e-47 |
| Msa1081690 | Msa1415540 | 0.864733 | 9.828695e-65 | -8.615850e-47 |
| Msa1081690 | Msa1417370 | 0.829109 | 6.187436e-55 | -8.615850e-47 |
| Msa1081690 | Msa1431480 | 0.827727 | 1.333668e-54 | -8.615850e-47 |
| Msa1081690 | Msa1433790 | 0.811845 | 5.709495e-51 | -8.615850e-47 |
| Msa1081690 | Msa1440430 | 0.800670 | 1.292266e-48 | -8.615850e-47 |
| Msa1081690 | Msa1440630 | 0.865348 | 6.305490e-65 | -8.615850e-47 |
| Msa1081690 | Msa1452140 | 0.837240 | 5.842601e-57 | -8.615850e-47 |
| Msa0242590 | Msa1081690 | 0.812815 | 3.505476e-51 | -8.615850e-47 |
| Msa0270340 | Msa1081690 | 0.861565 | 9.385913e-64 | -8.615850e-47 |
| Msa0280790 | Msa1081690 | 0.805127 | 1.550963e-49 | -8.615850e-47 |
| Msa0284800 | Msa1081690 | 0.819637 | 1.046154e-52 | -8.615850e-47 |
| Msa0298470 | Msa1081690 | 0.814433 | 1.544909e-51 | -8.615850e-47 |
| Msa0307670 | Msa1081690 | 0.823545 | 1.307279e-53 | -8.615850e-47 |
| Msa0324830 | Msa1081690 | 0.802219 | 6.224145e-49 | -8.615850e-47 |
| Msa0330520 | Msa1081690 | 0.827013 | 1.977295e-54 | -8.615850e-47 |
| Msa0486460 | Msa1081690 | 0.812456 | 4.200518e-51 | -8.615850e-47 |
| Msa0509550 | Msa1081690 | 0.803982 | 2.688281e-49 | -8.615850e-47 |
| Msa0517250 | Msa1081690 | 0.861200 | 1.212191e-63 | -8.615850e-47 |
| Msa0520260 | Msa1081690 | 0.819312 | 1.240944e-52 | -8.615850e-47 |
| Msa0520990 | Msa1081690 | 0.824022 | 1.010884e-53 | -8.615850e-47 |
| Msa0528570 | Msa1081690 | 0.862756 | 4.045612e-64 | -8.615850e-47 |
| Msa0529030 | Msa1081690 | 0.815799 | 7.682025e-52 | -8.615850e-47 |
| Msa0530780 | Msa1081690 | 0.809209 | 2.118794e-50 | -8.615850e-47 |
| Msa0531960 | Msa1081690 | 0.806432 | 8.249978e-50 | -8.615850e-47 |
| Msa0541300 | Msa1081690 | 0.867844 | 1.013865e-65 | -8.615850e-47 |
| Msa0541310 | Msa1081690 | 0.864377 | 1.270711e-64 | -8.615850e-47 |
| Msa0543660 | Msa1081690 | 0.804557 | 2.040614e-49 | -8.615850e-47 |
| Msa0549370 | Msa1081690 | 0.817816 | 2.710653e-52 | -8.615850e-47 |
| Msa0550050 | Msa1081690 | 0.832668 | 8.290530e-56 | -8.615850e-47 |
| Msa0557460 | Msa1081690 | 0.817436 | 3.300815e-52 | -8.615850e-47 |
| Msa0562350 | Msa1081690 | 0.836225 | 1.060321e-56 | -8.615850e-47 |
| Msa0563940 | Msa1081690 | 0.821416 | 4.085197e-53 | -8.615850e-47 |
| Msa0567170 | Msa1081690 | 0.808438 | 3.097397e-50 | -8.615850e-47 |
| Msa0570010 | Msa1081690 | 0.859472 | 4.039677e-63 | -8.615850e-47 |
| Msa0570120 | Msa1081690 | 0.802151 | 6.426461e-49 | -8.615850e-47 |
| Msa0571290 | Msa1081690 | 0.802324 | 5.921449e-49 | -8.615850e-47 |
| Msa0584420 | Msa1081690 | 0.803568 | 3.275724e-49 | -8.615850e-47 |
| Msa0585020 | Msa1081690 | 0.850597 | 1.532023e-60 | -8.615850e-47 |
| Msa0587620 | Msa1081690 | 0.813413 | 2.592176e-51 | -8.615850e-47 |
| Msa0597270 | Msa1081690 | 0.853773 | 1.913825e-61 | -8.615850e-47 |
| Msa0859290 | Msa1081690 | 0.869462 | 3.041153e-66 | -8.615850e-47 |
| Msa0864940 | Msa1081690 | 0.827238 | 1.747278e-54 | -8.615850e-47 |
| Msa0921590 | Msa1081690 | 0.800364 | 1.492070e-48 | -8.615850e-47 |
| Msa0931590 | Msa1081690 | 0.808032 | 3.780746e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081690 | MtrunA17_Chr7g0268781 | 99.046 | 629 | 6 | 0 | 1 | 629 | 1 | 629 | 0.0 | 1284 |
| Msa1081690 | MtrunA17_Chr1g0195911 | 76.899 | 632 | 132 | 6 | 1 | 629 | 1 | 621 | 0.0 | 998 |
| Msa1081690 | MtrunA17_Chr4g0010091 | 47.902 | 572 | 275 | 9 | 30 | 594 | 28 | 583 | 3.19e-179 | 521 |
| Msa1081690 | MtrunA17_Chr7g0245201 | 44.034 | 595 | 289 | 11 | 34 | 615 | 59 | 622 | 9.83e-163 | 480 |
| Msa1081690 | MtrunA17_Chr5g0401451 | 40.156 | 640 | 317 | 14 | 22 | 629 | 25 | 630 | 2.70e-151 | 451 |
| Msa1081690 | MtrunA17_Chr4g0053841 | 38.792 | 629 | 327 | 17 | 25 | 629 | 1 | 595 | 1.18e-136 | 412 |
| Msa1081690 | MtrunA17_Chr2g0303541 | 37.086 | 604 | 333 | 11 | 26 | 601 | 15 | 599 | 5.21e-123 | 378 |
| Msa1081690 | MtrunA17_Chr3g0108331 | 35.057 | 619 | 319 | 15 | 20 | 617 | 7 | 563 | 6.98e-117 | 360 |
| Msa1081690 | MtrunA17_Chr2g0279481 | 31.373 | 663 | 384 | 12 | 13 | 619 | 20 | 667 | 9.30e-108 | 340 |
| Msa1081690 | MtrunA17_Chr8g0374011 | 35.392 | 599 | 312 | 12 | 38 | 575 | 22 | 606 | 3.60e-107 | 337 |
| Msa1081690 | MtrunA17_Chr2g0320691 | 35.034 | 588 | 334 | 12 | 34 | 590 | 21 | 591 | 5.51e-107 | 336 |
| Msa1081690 | MtrunA17_Chr5g0432861 | 33.773 | 607 | 305 | 11 | 20 | 594 | 8 | 549 | 9.00e-107 | 334 |
| Msa1081690 | MtrunA17_Chr4g0050021 | 33.120 | 625 | 347 | 15 | 31 | 602 | 38 | 644 | 3.10e-106 | 335 |
| Msa1081690 | MtrunA17_Chr8g0382231 | 33.884 | 605 | 310 | 13 | 36 | 604 | 52 | 602 | 1.38e-102 | 325 |
| Msa1081690 | MtrunA17_Chr2g0285511 | 34.570 | 593 | 340 | 14 | 20 | 590 | 9 | 575 | 3.43e-97 | 310 |
| Msa1081690 | MtrunA17_Chr1g0181181 | 35.294 | 544 | 301 | 12 | 34 | 556 | 24 | 537 | 8.36e-96 | 305 |
| Msa1081690 | MtrunA17_Chr1g0199631 | 33.755 | 554 | 328 | 12 | 54 | 590 | 8 | 539 | 9.63e-92 | 295 |
| Msa1081690 | MtrunA17_Chr1g0207461 | 34.451 | 537 | 322 | 11 | 34 | 556 | 26 | 546 | 5.51e-86 | 281 |
| Msa1081690 | MtrunA17_Chr5g0401341 | 36.157 | 484 | 265 | 11 | 34 | 498 | 25 | 483 | 1.05e-85 | 280 |
| Msa1081690 | MtrunA17_Chr5g0412591 | 36.673 | 529 | 250 | 14 | 18 | 506 | 12 | 495 | 8.32e-81 | 266 |
| Msa1081690 | MtrunA17_Chr4g0076521 | 33.155 | 561 | 309 | 12 | 27 | 566 | 17 | 532 | 1.02e-80 | 266 |
| Msa1081690 | MtrunA17_Chr1g0150191 | 34.105 | 475 | 290 | 9 | 34 | 497 | 25 | 487 | 2.45e-80 | 266 |
| Msa1081690 | MtrunA17_Chr8g0367891 | 33.276 | 583 | 331 | 16 | 39 | 587 | 29 | 587 | 2.35e-77 | 257 |
| Msa1081690 | MtrunA17_Chr2g0290741 | 31.959 | 485 | 277 | 10 | 27 | 496 | 17 | 463 | 3.38e-66 | 227 |
| Msa1081690 | MtrunA17_Chr1g0191711 | 27.406 | 478 | 286 | 7 | 37 | 503 | 59 | 486 | 9.41e-65 | 222 |
| Msa1081690 | MtrunA17_Chr4g0003891 | 33.099 | 426 | 231 | 11 | 204 | 616 | 33 | 417 | 7.83e-62 | 212 |
| Msa1081690 | MtrunA17_Chr2g0332281 | 33.105 | 438 | 232 | 10 | 213 | 627 | 24 | 423 | 1.17e-58 | 202 |
| Msa1081690 | MtrunA17_Chr4g0023801 | 25.397 | 567 | 368 | 13 | 45 | 593 | 14 | 543 | 3.05e-42 | 160 |
| Msa1081690 | MtrunA17_Chr4g0037661 | 26.337 | 505 | 289 | 14 | 37 | 499 | 4 | 467 | 5.83e-41 | 157 |
| Msa1081690 | MtrunA17_Chr1g0206621 | 50.365 | 137 | 66 | 1 | 43 | 177 | 75 | 211 | 1.22e-40 | 148 |
| Msa1081690 | MtrunA17_Chr1g0163311 | 27.682 | 289 | 148 | 6 | 296 | 575 | 286 | 522 | 8.22e-27 | 114 |
| Msa1081690 | MtrunA17_Chr2g0280541 | 25.170 | 441 | 258 | 10 | 102 | 518 | 1 | 393 | 3.09e-26 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081690 | AT1G03010.1 | 68.837 | 645 | 174 | 9 | 1 | 629 | 1 | 634 | 0.0 | 862 |
| Msa1081690 | AT1G03010.2 | 69.055 | 614 | 163 | 9 | 32 | 629 | 5 | 607 | 0.0 | 816 |
| Msa1081690 | AT1G03010.3 | 69.055 | 614 | 163 | 9 | 32 | 629 | 31 | 633 | 0.0 | 815 |
| Msa1081690 | AT2G47860.1 | 61.231 | 650 | 216 | 12 | 1 | 629 | 1 | 635 | 0.0 | 743 |
| Msa1081690 | AT2G47860.3 | 59.138 | 673 | 216 | 13 | 1 | 629 | 1 | 658 | 0.0 | 730 |
| Msa1081690 | AT2G47860.5 | 61.205 | 531 | 170 | 11 | 121 | 629 | 1 | 517 | 0.0 | 583 |
| Msa1081690 | AT2G47860.2 | 61.205 | 531 | 170 | 11 | 121 | 629 | 1 | 517 | 0.0 | 583 |
| Msa1081690 | AT2G47860.4 | 61.269 | 457 | 155 | 7 | 1 | 448 | 1 | 444 | 0.0 | 531 |
| Msa1081690 | AT2G47860.6 | 58.333 | 480 | 155 | 8 | 1 | 448 | 1 | 467 | 4.25e-180 | 518 |
| Msa1081690 | AT5G48800.1 | 46.540 | 578 | 278 | 8 | 23 | 594 | 28 | 580 | 1.90e-174 | 509 |
| Msa1081690 | AT5G67385.1 | 40.129 | 618 | 320 | 13 | 22 | 617 | 10 | 599 | 5.14e-141 | 424 |
| Msa1081690 | AT3G08570.1 | 43.194 | 551 | 284 | 11 | 34 | 575 | 32 | 562 | 2.85e-140 | 422 |
| Msa1081690 | AT3G08660.1 | 40.842 | 546 | 276 | 11 | 34 | 575 | 32 | 534 | 1.11e-133 | 404 |
| Msa1081690 | AT5G67385.4 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.78e-126 | 384 |
| Msa1081690 | AT5G67385.5 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.78e-126 | 384 |
| Msa1081690 | AT5G67385.2 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.78e-126 | 384 |
| Msa1081690 | AT5G67385.3 | 39.347 | 582 | 304 | 12 | 57 | 617 | 1 | 554 | 2.78e-126 | 384 |
| Msa1081690 | AT3G08660.3 | 40.232 | 517 | 262 | 11 | 63 | 575 | 1 | 474 | 3.90e-121 | 370 |
| Msa1081690 | AT1G30440.1 | 35.434 | 587 | 327 | 12 | 26 | 575 | 15 | 586 | 1.41e-111 | 349 |
| Msa1081690 | AT5G03250.1 | 35.593 | 590 | 324 | 13 | 26 | 590 | 15 | 573 | 1.82e-106 | 334 |
| Msa1081690 | AT2G30520.1 | 33.445 | 595 | 326 | 13 | 22 | 594 | 15 | 561 | 1.63e-105 | 332 |
| Msa1081690 | AT5G13600.1 | 36.538 | 572 | 297 | 16 | 39 | 583 | 29 | 561 | 2.87e-101 | 320 |
| Msa1081690 | AT3G49970.1 | 33.956 | 589 | 286 | 16 | 48 | 617 | 6 | 510 | 3.26e-98 | 310 |
| Msa1081690 | AT3G49970.2 | 33.956 | 589 | 286 | 16 | 48 | 617 | 6 | 510 | 3.26e-98 | 310 |
| Msa1081690 | AT2G30520.2 | 33.036 | 560 | 306 | 12 | 56 | 594 | 2 | 513 | 5.85e-95 | 302 |
| Msa1081690 | AT2G30520.3 | 33.036 | 560 | 306 | 12 | 56 | 594 | 2 | 513 | 5.85e-95 | 302 |
| Msa1081690 | AT3G44820.1 | 31.940 | 598 | 333 | 11 | 26 | 575 | 12 | 583 | 5.35e-94 | 303 |
| Msa1081690 | AT5G66560.1 | 32.039 | 618 | 322 | 9 | 38 | 575 | 21 | 620 | 4.31e-92 | 298 |
| Msa1081690 | AT5G66560.3 | 31.908 | 608 | 316 | 9 | 48 | 575 | 2 | 591 | 3.82e-90 | 293 |
| Msa1081690 | AT2G14820.2 | 34.375 | 544 | 320 | 13 | 34 | 558 | 25 | 550 | 9.19e-90 | 291 |
| Msa1081690 | AT2G14820.1 | 34.375 | 544 | 320 | 13 | 34 | 558 | 25 | 550 | 9.19e-90 | 291 |
| Msa1081690 | AT3G50840.1 | 33.333 | 573 | 310 | 10 | 22 | 575 | 2 | 521 | 2.68e-88 | 286 |
| Msa1081690 | AT5G66560.4 | 33.582 | 536 | 302 | 7 | 76 | 575 | 64 | 581 | 3.48e-88 | 287 |
| Msa1081690 | AT3G08660.2 | 37.915 | 422 | 224 | 9 | 34 | 451 | 32 | 419 | 1.82e-87 | 279 |
| Msa1081690 | AT5G10250.2 | 32.184 | 609 | 311 | 16 | 31 | 598 | 44 | 591 | 2.56e-87 | 285 |
| Msa1081690 | AT5G10250.1 | 31.886 | 599 | 311 | 15 | 31 | 598 | 44 | 576 | 3.29e-84 | 276 |
| Msa1081690 | AT5G67440.3 | 36.059 | 477 | 268 | 10 | 34 | 498 | 25 | 476 | 3.74e-84 | 275 |
| Msa1081690 | AT5G67440.1 | 36.059 | 477 | 268 | 10 | 34 | 498 | 25 | 476 | 3.74e-84 | 275 |
| Msa1081690 | AT1G67900.5 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1081690 | AT1G67900.1 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1081690 | AT1G67900.3 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1081690 | AT1G67900.6 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1081690 | AT1G67900.2 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1081690 | AT1G67900.4 | 33.386 | 629 | 356 | 15 | 18 | 600 | 12 | 623 | 1.02e-83 | 275 |
| Msa1081690 | AT4G31820.1 | 35.404 | 483 | 265 | 11 | 29 | 498 | 20 | 468 | 4.14e-82 | 270 |
| Msa1081690 | AT3G50840.2 | 33.086 | 538 | 288 | 10 | 57 | 575 | 1 | 485 | 7.47e-80 | 263 |
| Msa1081690 | AT3G50840.3 | 33.086 | 538 | 288 | 10 | 57 | 575 | 1 | 485 | 7.47e-80 | 263 |
| Msa1081690 | AT5G67440.2 | 36.304 | 460 | 256 | 10 | 51 | 498 | 5 | 439 | 9.98e-80 | 262 |
| Msa1081690 | AT4G37590.1 | 32.165 | 485 | 271 | 11 | 34 | 501 | 25 | 468 | 1.83e-77 | 258 |
| Msa1081690 | AT5G03250.2 | 34.350 | 492 | 270 | 11 | 121 | 590 | 1 | 461 | 4.03e-77 | 254 |
| Msa1081690 | AT3G26490.1 | 35.441 | 522 | 270 | 14 | 18 | 498 | 12 | 507 | 5.96e-76 | 254 |
| Msa1081690 | AT3G26490.3 | 35.441 | 522 | 270 | 14 | 18 | 498 | 12 | 507 | 5.96e-76 | 254 |
| Msa1081690 | AT3G26490.4 | 35.441 | 522 | 270 | 14 | 18 | 498 | 12 | 507 | 5.96e-76 | 254 |
| Msa1081690 | AT5G47800.3 | 32.700 | 474 | 287 | 9 | 33 | 496 | 23 | 474 | 1.60e-74 | 249 |
| Msa1081690 | AT5G47800.1 | 32.700 | 474 | 287 | 9 | 33 | 496 | 23 | 474 | 1.60e-74 | 249 |
| Msa1081690 | AT5G47800.4 | 32.700 | 474 | 287 | 9 | 33 | 496 | 23 | 474 | 1.60e-74 | 249 |
| Msa1081690 | AT2G23050.1 | 32.454 | 493 | 268 | 12 | 24 | 505 | 19 | 457 | 2.05e-74 | 246 |
| Msa1081690 | AT5G47800.2 | 32.700 | 474 | 287 | 9 | 33 | 496 | 136 | 587 | 3.24e-73 | 248 |
| Msa1081690 | AT4G31820.2 | 34.076 | 449 | 249 | 11 | 63 | 498 | 1 | 415 | 8.79e-68 | 230 |
| Msa1081690 | AT5G66560.2 | 31.590 | 478 | 242 | 8 | 38 | 448 | 21 | 480 | 9.10e-64 | 218 |
| Msa1081690 | AT3G26490.2 | 33.617 | 470 | 259 | 13 | 18 | 453 | 12 | 462 | 4.78e-58 | 203 |
| Msa1081690 | AT1G52770.1 | 34.430 | 395 | 209 | 7 | 197 | 575 | 17 | 377 | 6.78e-58 | 202 |
| Msa1081690 | AT5G64330.1 | 34.384 | 349 | 202 | 8 | 269 | 596 | 371 | 713 | 7.65e-52 | 191 |
| Msa1081690 | AT5G64330.1 | 34.677 | 248 | 135 | 3 | 34 | 256 | 50 | 295 | 5.86e-41 | 159 |
| Msa1081690 | AT2G23050.2 | 32.564 | 390 | 209 | 10 | 121 | 505 | 1 | 341 | 1.19e-50 | 179 |
| Msa1081690 | AT5G64330.3 | 41.224 | 245 | 129 | 4 | 269 | 503 | 312 | 551 | 4.63e-49 | 181 |
| Msa1081690 | AT5G64330.3 | 34.061 | 229 | 124 | 3 | 53 | 256 | 10 | 236 | 5.89e-35 | 140 |
| Msa1081690 | AT3G15570.1 | 36.913 | 298 | 142 | 5 | 222 | 499 | 38 | 309 | 5.38e-49 | 177 |
| Msa1081690 | AT5G64330.2 | 41.224 | 245 | 129 | 4 | 269 | 503 | 371 | 610 | 6.73e-49 | 181 |
| Msa1081690 | AT5G64330.2 | 34.677 | 248 | 135 | 3 | 34 | 256 | 50 | 295 | 2.49e-41 | 159 |
| Msa1081690 | AT3G19850.1 | 25.202 | 496 | 303 | 9 | 36 | 497 | 3 | 464 | 8.44e-49 | 179 |
| Msa1081690 | AT3G22104.1 | 29.032 | 465 | 265 | 11 | 36 | 483 | 4 | 420 | 3.35e-45 | 168 |
| Msa1081690 | AT1G50280.1 | 25.000 | 488 | 309 | 10 | 32 | 492 | 3 | 460 | 1.66e-44 | 167 |
| Msa1081690 | AT5G48130.1 | 27.096 | 513 | 292 | 14 | 42 | 534 | 45 | 495 | 1.97e-44 | 168 |
| Msa1081690 | AT1G50280.2 | 24.943 | 441 | 282 | 8 | 74 | 492 | 14 | 427 | 1.04e-42 | 161 |
| Msa1081690 | AT5G17580.2 | 27.368 | 475 | 302 | 9 | 38 | 503 | 22 | 462 | 1.74e-39 | 153 |
| Msa1081690 | AT5G17580.1 | 27.789 | 475 | 300 | 10 | 38 | 503 | 7 | 447 | 2.77e-39 | 152 |
| Msa1081690 | AT3G03510.1 | 28.673 | 422 | 226 | 12 | 90 | 501 | 8 | 364 | 1.76e-38 | 148 |
| Msa1081690 | AT3G22104.4 | 28.133 | 391 | 219 | 8 | 107 | 483 | 3 | 345 | 1.43e-34 | 136 |
| Msa1081690 | AT3G22104.2 | 28.133 | 391 | 219 | 8 | 107 | 483 | 3 | 345 | 1.43e-34 | 136 |
| Msa1081690 | AT3G22104.3 | 28.133 | 391 | 219 | 8 | 107 | 483 | 3 | 345 | 1.43e-34 | 136 |
Find 121 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAGTTTCCTCTTGTTTCT+AGG | 0.091654 | 7_2:-81542239 | Msa1081690:intron |
| CACCAATCTAAGGGTGTTTC+TGG | 0.142169 | 7_2:+81541778 | None:intergenic |
| GAGAAAATTGTCAAGTAATT+TGG | 0.180360 | 7_2:+81541198 | None:intergenic |
| TTAAATTAGATTATATATTT+AGG | 0.198352 | 7_2:-81544057 | Msa1081690:five_prime_UTR |
| GAATTGAAGCCTAGTGTTTC+AGG | 0.216646 | 7_2:-81543837 | Msa1081690:CDS |
| GTCTCATCAGTGGTAGAAAA+TGG | 0.229342 | 7_2:-81543877 | Msa1081690:exon |
| TTTCTAGGAGTGGAAGATTT+AGG | 0.247375 | 7_2:-81542224 | Msa1081690:CDS |
| AACTTTCCATTGACAGAAAC+TGG | 0.249645 | 7_2:-81543960 | Msa1081690:five_prime_UTR |
| TTCTTTACTACGAACAAATA+AGG | 0.259310 | 7_2:-81540602 | Msa1081690:CDS |
| AGAATTCTCAGAAAAGAATT+TGG | 0.264671 | 7_2:-81542025 | Msa1081690:CDS |
| AGAGTTGATCAGCAAAATTT+TGG | 0.272364 | 7_2:-81541677 | Msa1081690:CDS |
| AACTTCTTGTAGAAGTGATT+TGG | 0.280903 | 7_2:-81541467 | Msa1081690:CDS |
| ATCTTGTTTGGTGGTATTCA+TGG | 0.287931 | 7_2:-81540546 | Msa1081690:CDS |
| TTCTCCATGACACTATCTTT+TGG | 0.314762 | 7_2:-81544007 | Msa1081690:five_prime_UTR |
| GGGAGTTTGATCTAGCAAAA+AGG | 0.323513 | 7_2:-81540063 | Msa1081690:three_prime_UTR |
| AAGATATCAACCTTGTTAAT+AGG | 0.326340 | 7_2:-81541903 | Msa1081690:CDS |
| TGTATAATGTTTGATGTGTT+TGG | 0.333583 | 7_2:+81541964 | None:intergenic |
| ATTTACCTTGTGAAGTGAAT+AGG | 0.350440 | 7_2:+81542760 | None:intergenic |
| AGAGTTTCCCCACCAATCTA+AGG | 0.353136 | 7_2:+81541768 | None:intergenic |
| GAGAATGAGGTTGAATGATT+TGG | 0.354022 | 7_2:-81540409 | Msa1081690:CDS |
| AGTATTCGTGGCAGTGGAAC+TGG | 0.358592 | 7_2:-81540273 | Msa1081690:CDS |
| AGCTGTTGACATCTTCCTTA+AGG | 0.360096 | 7_2:-81541074 | Msa1081690:intron |
| GCTTCTCCAGTTTCTGTCAA+TGG | 0.366166 | 7_2:+81543954 | None:intergenic |
| TTAAGAATTGAGCTTTGCTT+TGG | 0.368579 | 7_2:+81541226 | None:intergenic |
| TTCTAAAACATTATCAATGA+TGG | 0.372684 | 7_2:-81541803 | Msa1081690:CDS |
| TATATAACTCAAAATCTATC+AGG | 0.379497 | 7_2:+81540089 | None:intergenic |
| CAAAGATCAGGGAGTGGTAT+AGG | 0.379986 | 7_2:-81540513 | Msa1081690:CDS |
| GTATAATGTTTGATGTGTTT+GGG | 0.390388 | 7_2:+81541965 | None:intergenic |
| GGACACAATCAAATCTTGTT+TGG | 0.395537 | 7_2:-81540558 | Msa1081690:CDS |
| AAACATGAAAGAAATGCTAT+TGG | 0.398126 | 7_2:+81541520 | None:intergenic |
| TTTCTTCGAACGAGTTATAT+CGG | 0.401205 | 7_2:-81541725 | Msa1081690:CDS |
| ATAGGTTCATCCGAACATTA+AGG | 0.402802 | 7_2:-81540736 | Msa1081690:intron |
| GAAAGGCTACCAGTTCAAAT+AGG | 0.406258 | 7_2:-81540633 | Msa1081690:CDS |
| TGCAAAGAGCAACTAACTTC+TGG | 0.410485 | 7_2:-81541853 | Msa1081690:CDS |
| GGTCAATTTCCTCAAAGATC+AGG | 0.415797 | 7_2:-81540525 | Msa1081690:CDS |
| AAAGCAAAGCTCAATTCTTA+AGG | 0.417656 | 7_2:-81541224 | Msa1081690:CDS |
| GAGCTTTGCTTTGGAGATCC+AGG | 0.425100 | 7_2:+81541235 | None:intergenic |
| AGGTTGATATCTTCTGATAA+AGG | 0.430627 | 7_2:+81541913 | None:intergenic |
| ATACCACTCCCTGATCTTTG+AGG | 0.435450 | 7_2:+81540516 | None:intergenic |
| TATGCACATAATTCTCTTCA+AGG | 0.435685 | 7_2:-81541649 | Msa1081690:CDS |
| AGCACTTGCAGAGCTACTTC+CGG | 0.439656 | 7_2:-81541131 | Msa1081690:CDS |
| TCACTGGAGACATCAGATAT+TGG | 0.444897 | 7_2:+81542809 | None:intergenic |
| GCTTACTACCAACTCAATCT+AGG | 0.447056 | 7_2:-81541555 | Msa1081690:CDS |
| ACTTGTACACCTATTTGAAC+TGG | 0.460924 | 7_2:+81540624 | None:intergenic |
| CGCTCCGAGTCCTTAATGTT+CGG | 0.462622 | 7_2:+81540726 | None:intergenic |
| TTCCGTATTAACAGTATTCG+TGG | 0.465111 | 7_2:-81540285 | Msa1081690:CDS |
| AGGCTTCGAAATGCGATGAA+TGG | 0.467453 | 7_2:-81540582 | Msa1081690:CDS |
| TTTCCTCTTGTTTCTAGGAG+TGG | 0.473410 | 7_2:-81542234 | Msa1081690:CDS |
| TCAGGGAGTGGTATAGGAAG+TGG | 0.474984 | 7_2:-81540507 | Msa1081690:CDS |
| GTAAGTCTTCCGACCGTGCC+AGG | 0.475353 | 7_2:-81542162 | Msa1081690:CDS |
| AGCCTAGTGTTTCAGGAAGA+AGG | 0.476944 | 7_2:-81543830 | Msa1081690:CDS |
| GGAAACCGGGACCGTGGTTG+TGG | 0.476979 | 7_2:+81540240 | None:intergenic |
| TGCCACGAATACTGTTAATA+CGG | 0.478280 | 7_2:+81540283 | None:intergenic |
| CTTGTAACGCGAGCATGATC+CGG | 0.480182 | 7_2:+81541112 | None:intergenic |
| GATCGGTTTACAACTCGATC+AGG | 0.481839 | 7_2:-81541437 | Msa1081690:CDS |
| TACTTGGATGGTAAGATCAC+TGG | 0.486316 | 7_2:+81542793 | None:intergenic |
| AAACACATCAAACATTATAC+AGG | 0.492859 | 7_2:-81541962 | Msa1081690:CDS |
| TCTCATCAGTGGTAGAAAAT+GGG | 0.495228 | 7_2:-81543876 | Msa1081690:exon |
| TCTTCTGCAATTCAATGTCA+AGG | 0.497562 | 7_2:+81541608 | None:intergenic |
| AAGAGCTGAATCATATCTAA+AGG | 0.501938 | 7_2:-81541998 | Msa1081690:CDS |
| AATAGGTTGATGCTCCTACT+TGG | 0.504109 | 7_2:+81542777 | None:intergenic |
| ATATATAATCTAATTTAAGA+TGG | 0.509153 | 7_2:+81544062 | None:intergenic |
| AACCAGAAACACCCTTAGAT+TGG | 0.511015 | 7_2:-81541780 | Msa1081690:CDS |
| CTTCTGCAATTCAATGTCAA+GGG | 0.515528 | 7_2:+81541609 | None:intergenic |
| AAAATGGGAGTTGTAACTCT+TGG | 0.524005 | 7_2:-81543861 | Msa1081690:CDS |
| CACAATCAAATCTTGTTTGG+TGG | 0.524281 | 7_2:-81540555 | Msa1081690:CDS |
| ATAGCTGCAAAATTCTGCTA+TGG | 0.525366 | 7_2:-81542120 | Msa1081690:CDS |
| GAGTATGAATTTGACAGTCC+TGG | 0.526590 | 7_2:-81541253 | Msa1081690:CDS |
| GCATGTCTTATGCTTGAACT+TGG | 0.528359 | 7_2:+81543798 | None:intergenic |
| TGAATCATATCTAAAGGAAA+CGG | 0.538877 | 7_2:-81541992 | Msa1081690:CDS |
| GCATAAGACATGCCACTGAA+TGG | 0.541068 | 7_2:-81543788 | Msa1081690:intron |
| ATTAACAGTATTCGTGGCAG+TGG | 0.547672 | 7_2:-81540279 | Msa1081690:CDS |
| CATTGATTAGCCTATTAACA+AGG | 0.548783 | 7_2:+81541893 | None:intergenic |
| TGCATCTACACCACCTGGCA+CGG | 0.550474 | 7_2:+81542149 | None:intergenic |
| TATAATCTAATTTAAGATGG+AGG | 0.552605 | 7_2:+81544065 | None:intergenic |
| TCATCCGAACATTAAGGACT+CGG | 0.556784 | 7_2:-81540730 | Msa1081690:CDS |
| GTCAATTTCCTCAAAGATCA+GGG | 0.559074 | 7_2:-81540524 | Msa1081690:CDS |
| AGAAACACCCTTAGATTGGT+GGG | 0.561564 | 7_2:-81541776 | Msa1081690:CDS |
| GCCATGCCGCACAAAATGAA+AGG | 0.570379 | 7_2:-81540650 | Msa1081690:CDS |
| ACCGATGCATAGTTATCTCT+AGG | 0.575158 | 7_2:+81540474 | None:intergenic |
| GATTTGAAGAATTTGCGTGC+AGG | 0.575709 | 7_2:+81540342 | None:intergenic |
| TTGAATTGCAGAAGAAACAA+AGG | 0.576448 | 7_2:-81541600 | Msa1081690:CDS |
| CTAGTCCACAACCACGGTCC+CGG | 0.580906 | 7_2:-81540245 | Msa1081690:CDS |
| TCCTAGAGATAACTATGCAT+CGG | 0.582662 | 7_2:-81540475 | Msa1081690:CDS |
| AAGTAACAAGAATGAGAATG+AGG | 0.586252 | 7_2:-81540422 | Msa1081690:CDS |
| CAGAAACACCCTTAGATTGG+TGG | 0.586270 | 7_2:-81541777 | Msa1081690:CDS |
| GGTTGATGCTCCTACTTGGA+TGG | 0.586634 | 7_2:+81542781 | None:intergenic |
| AGATGGAGGAAAATAAATGC+AGG | 0.587438 | 7_2:+81544079 | None:intergenic |
| CTTGTAGAAGTGATTTGGAG+AGG | 0.587525 | 7_2:-81541462 | Msa1081690:CDS |
| TGAATTGCAGAAGAAACAAA+GGG | 0.588131 | 7_2:-81541599 | Msa1081690:CDS |
| GCACTCGAAGGTGAATTCGT+TGG | 0.590719 | 7_2:+81541391 | None:intergenic |
| AGTGATTTGGAGAGGCGGAT+CGG | 0.592594 | 7_2:-81541454 | Msa1081690:CDS |
| TCTACACCACCTGGCACGGT+CGG | 0.595705 | 7_2:+81542153 | None:intergenic |
| CTTCCACTCCTAGAAACAAG+AGG | 0.596628 | 7_2:+81542231 | None:intergenic |
| CATGCTCGCGTTACAAGCGA+TGG | 0.602341 | 7_2:-81541106 | Msa1081690:CDS |
| GAGTTTCCCCACCAATCTAA+GGG | 0.605139 | 7_2:+81541769 | None:intergenic |
| ATATCGGTTATGAAATCGAA+GGG | 0.606291 | 7_2:-81541709 | Msa1081690:CDS |
| AGTGATCTTACCATCCAAGT+AGG | 0.606850 | 7_2:-81542791 | Msa1081690:CDS |
| CTTCGAAATGCGATGAATGG+AGG | 0.608119 | 7_2:-81540579 | Msa1081690:CDS |
| GTCCTTCTTCCTGAAACACT+AGG | 0.612878 | 7_2:+81543828 | None:intergenic |
| ATGCACATAATTCTCTTCAA+GGG | 0.619987 | 7_2:-81541648 | Msa1081690:CDS |
| TGAAAAGGAAACCGGGACCG+TGG | 0.620189 | 7_2:+81540234 | None:intergenic |
| TCAAATGCATCTACACCACC+TGG | 0.627222 | 7_2:+81542144 | None:intergenic |
| TATATCGGTTATGAAATCGA+AGG | 0.631995 | 7_2:-81541710 | Msa1081690:CDS |
| ATCAACCTATTCACTTCACA+AGG | 0.635818 | 7_2:-81542765 | Msa1081690:intron |
| TAGCATAGCAATATTCGAGA+GGG | 0.638972 | 7_2:+81542080 | None:intergenic |
| TTTCCTCAAAGATCAGGGAG+TGG | 0.639154 | 7_2:-81540519 | Msa1081690:CDS |
| TGAACCAAAAGATAGTGTCA+TGG | 0.640837 | 7_2:+81544003 | None:intergenic |
| AAAATTATAATACCATTCAG+TGG | 0.645788 | 7_2:+81543776 | None:intergenic |
| GAAACACCCTTAGATTGGTG+GGG | 0.662827 | 7_2:-81541775 | Msa1081690:CDS |
| GTAGAAGTGATTTGGAGAGG+CGG | 0.668323 | 7_2:-81541459 | Msa1081690:CDS |
| ATAGCATAGCAATATTCGAG+AGG | 0.677800 | 7_2:+81542079 | None:intergenic |
| AAAGGTGGTGAATGTGTGTG+TGG | 0.678039 | 7_2:+81544115 | None:intergenic |
| AGTCTTCCGACCGTGCCAGG+TGG | 0.691028 | 7_2:-81542159 | Msa1081690:CDS |
| GAAACACATAGTCTCATCAG+TGG | 0.694722 | 7_2:-81543887 | Msa1081690:five_prime_UTR |
| TTCGTGGCAGTGGAACTGGA+AGG | 0.695731 | 7_2:-81540269 | Msa1081690:CDS |
| ATTCTGCTATGGAATCAATG+TGG | 0.703925 | 7_2:-81542109 | Msa1081690:CDS |
| ACTATAGTCATGAAACTGAG+TGG | 0.715336 | 7_2:+81540199 | None:intergenic |
| ATTGTGTTGTGAGCACTCGA+AGG | 0.726239 | 7_2:+81541379 | None:intergenic |
| GAAGGTCTAGTCCACAACCA+CGG | 0.728361 | 7_2:-81540251 | Msa1081690:CDS |
| ACGGTCGGAAGACTTACACG+CGG | 0.812564 | 7_2:+81542168 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAATCTAATTTAAGA+TGG | + | chr7_2:81540158-81540177 | None:intergenic | 10.0% |
| !!! | TACTTTTTTCTTTTTTTTGA+AGG | - | chr7_2:81540469-81540488 | Msa1081690:CDS | 15.0% |
| !! | AATAGTATGATAATAATTGA+TGG | + | chr7_2:81540979-81540998 | None:intergenic | 15.0% |
| !!! | TCAAAATAATATTTTAGGAA+TGG | + | chr7_2:81541163-81541182 | None:intergenic | 15.0% |
| !!! | CTGTATCAAAATAATATTTT+AGG | + | chr7_2:81541168-81541187 | None:intergenic | 15.0% |
| !!! | TTTTTATGTAATGCAATAAA+TGG | + | chr7_2:81541249-81541268 | None:intergenic | 15.0% |
| !! | ATAATTATAACATATCAGAA+TGG | + | chr7_2:81541495-81541514 | None:intergenic | 15.0% |
| !! | TTATAATTATACATTCAACA+TGG | - | chr7_2:81541505-81541524 | Msa1081690:CDS | 15.0% |
| !!! | TTTAAAACCTTTTATACTAA+CGG | + | chr7_2:81541654-81541673 | None:intergenic | 15.0% |
| !!! | ATATTATTTTCTAACGTTAT+GGG | + | chr7_2:81543268-81543287 | None:intergenic | 15.0% |
| !!! | AATATTATTTTCTAACGTTA+TGG | + | chr7_2:81543269-81543288 | None:intergenic | 15.0% |
| !!! | TAGATTTTGAGTTATATAAA+TGG | - | chr7_2:81544133-81544152 | Msa1081690:five_prime_UTR | 15.0% |
| !!! | AGATTTTGAGTTATATAAAT+GGG | - | chr7_2:81544134-81544153 | Msa1081690:five_prime_UTR | 15.0% |
| !!! | TATAATCTAATTTAAGATGG+AGG | + | chr7_2:81540155-81540174 | None:intergenic | 20.0% |
| !! | AAAATTATAATACCATTCAG+TGG | + | chr7_2:81540444-81540463 | None:intergenic | 20.0% |
| !!! | TAAATAAAAACTTCTAGAAG+TGG | + | chr7_2:81540502-81540521 | None:intergenic | 20.0% |
| !!! | TCTTAATTTTCTAATCTCAA+GGG | + | chr7_2:81540847-81540866 | None:intergenic | 20.0% |
| !!! | ATCTTAATTTTCTAATCTCA+AGG | + | chr7_2:81540848-81540867 | None:intergenic | 20.0% |
| !!! | TCTCTGAAAATTTCAATTTT+TGG | - | chr7_2:81541301-81541320 | Msa1081690:CDS | 20.0% |
| !! | TGATAACATACTATATAAGA+TGG | + | chr7_2:81541821-81541840 | None:intergenic | 20.0% |
| !!! | ATCATTGATAATGTTTTAGA+AGG | + | chr7_2:81542415-81542434 | None:intergenic | 20.0% |
| !!! | TTCTAAAACATTATCAATGA+TGG | - | chr7_2:81542414-81542433 | Msa1081690:intron | 20.0% |
| !!! | ATGATATAGATTCAATTTTG+AGG | - | chr7_2:81542863-81542882 | Msa1081690:intron | 20.0% |
| !!! | TTAATAGTGTTTTCAATAGA+AGG | + | chr7_2:81543189-81543208 | None:intergenic | 20.0% |
| !! | TAAATAATGACTGAAATTGT+TGG | - | chr7_2:81543446-81543465 | Msa1081690:intron | 20.0% |
| !!! | TGTTGGTTTATTTATCATAT+AGG | - | chr7_2:81543463-81543482 | Msa1081690:intron | 20.0% |
| !! | TATATAACTCAAAATCTATC+AGG | + | chr7_2:81544131-81544150 | None:intergenic | 20.0% |
| ! | ATTAGTTCATCAACCATAAT+AGG | + | chr7_2:81540719-81540738 | None:intergenic | 25.0% |
| !! | CTTAATTTTCTAATCTCAAG+GGG | + | chr7_2:81540846-81540865 | None:intergenic | 25.0% |
| !!! | CATACTATTGTTTTAGCTTT+TGG | - | chr7_2:81540990-81541009 | Msa1081690:intron | 25.0% |
| ! | TTGGATTTCCAAATTCATTT+AGG | + | chr7_2:81541016-81541035 | None:intergenic | 25.0% |
| ! | ACTCCAATTATTTGCATTAA+TGG | - | chr7_2:81541117-81541136 | Msa1081690:CDS | 25.0% |
| ! | CTCCAATTATTTGCATTAAT+GGG | - | chr7_2:81541118-81541137 | Msa1081690:CDS | 25.0% |
| ! | AACCCATTAATGCAAATAAT+TGG | + | chr7_2:81541123-81541142 | None:intergenic | 25.0% |
| !! | AAACTTAAGTAACCATTTTG+AGG | - | chr7_2:81541194-81541213 | Msa1081690:CDS | 25.0% |
| ! | AGAATTCTCAGAAAAGAATT+TGG | - | chr7_2:81542192-81542211 | Msa1081690:CDS | 25.0% |
| ! | TGAATCATATCTAAAGGAAA+CGG | - | chr7_2:81542225-81542244 | Msa1081690:CDS | 25.0% |
| ! | GTATAATGTTTGATGTGTTT+GGG | + | chr7_2:81542255-81542274 | None:intergenic | 25.0% |
| ! | TGTATAATGTTTGATGTGTT+TGG | + | chr7_2:81542256-81542275 | None:intergenic | 25.0% |
| ! | AAACACATCAAACATTATAC+AGG | - | chr7_2:81542255-81542274 | Msa1081690:intron | 25.0% |
| ! | AAGATATCAACCTTGTTAAT+AGG | - | chr7_2:81542314-81542333 | Msa1081690:intron | 25.0% |
| ! | AAACATGAAAGAAATGCTAT+TGG | + | chr7_2:81542700-81542719 | None:intergenic | 25.0% |
| !!! | CTTTTCTACTTTTCTGAATT+TGG | - | chr7_2:81542888-81542907 | Msa1081690:intron | 25.0% |
| ! | GAGAAAATTGTCAAGTAATT+TGG | + | chr7_2:81543022-81543041 | None:intergenic | 25.0% |
| !!! | TTGCTTTGATTTGTAAAGAA+AGG | - | chr7_2:81543416-81543435 | Msa1081690:intron | 25.0% |
| ! | TTCTTTACTACGAACAAATA+AGG | - | chr7_2:81543615-81543634 | Msa1081690:intron | 25.0% |
| ! | CATGTTTCTGAATAACTTCT+AGG | + | chr7_2:81540537-81540556 | None:intergenic | 30.0% |
| AATTTCATGAAAGCTTGAAG+TGG | + | chr7_2:81540592-81540611 | None:intergenic | 30.0% | |
| ATCATGTCATTGTTTGGTAA+AGG | + | chr7_2:81540894-81540913 | None:intergenic | 30.0% | |
| TTTCATATAGCTAACAGATG+AGG | + | chr7_2:81540939-81540958 | None:intergenic | 30.0% | |
| CCAAAAAAATTGTCCATTGT+CGG | + | chr7_2:81541045-81541064 | None:intergenic | 30.0% | |
| ! | GAATGGCTATTTCAATATAG+TGG | + | chr7_2:81541146-81541165 | None:intergenic | 30.0% |
| ATGGTGCAATAATAAGACAT+TGG | + | chr7_2:81541230-81541249 | None:intergenic | 30.0% | |
| GACATGAAAATTTCAAAGCA+TGG | + | chr7_2:81541347-81541366 | None:intergenic | 30.0% | |
| CTACGTGTATATAATGATTC+AGG | - | chr7_2:81541366-81541385 | Msa1081690:CDS | 30.0% | |
| ATTTACCTTGTGAAGTGAAT+AGG | + | chr7_2:81541460-81541479 | None:intergenic | 30.0% | |
| TGATACACCGTTAGTATAAA+AGG | - | chr7_2:81541644-81541663 | Msa1081690:CDS | 30.0% | |
| ATAGCAAAACTACATTTGAC+AGG | + | chr7_2:81541856-81541875 | None:intergenic | 30.0% | |
| AAGAGCTGAATCATATCTAA+AGG | - | chr7_2:81542219-81542238 | Msa1081690:CDS | 30.0% | |
| ! | AAGGAACAAGATTTTCACAA+TGG | + | chr7_2:81542288-81542307 | None:intergenic | 30.0% |
| !! | AGGTTGATATCTTCTGATAA+AGG | + | chr7_2:81542307-81542326 | None:intergenic | 30.0% |
| !! | CATTGATTAGCCTATTAACA+AGG | + | chr7_2:81542327-81542346 | None:intergenic | 30.0% |
| TTTCTTCGAACGAGTTATAT+CGG | - | chr7_2:81542492-81542511 | Msa1081690:intron | 30.0% | |
| ! | TATATCGGTTATGAAATCGA+AGG | - | chr7_2:81542507-81542526 | Msa1081690:intron | 30.0% |
| ! | ATATCGGTTATGAAATCGAA+GGG | - | chr7_2:81542508-81542527 | Msa1081690:intron | 30.0% |
| !! | AGAGTTGATCAGCAAAATTT+TGG | - | chr7_2:81542540-81542559 | Msa1081690:intron | 30.0% |
| TATGCACATAATTCTCTTCA+AGG | - | chr7_2:81542568-81542587 | Msa1081690:intron | 30.0% | |
| ATGCACATAATTCTCTTCAA+GGG | - | chr7_2:81542569-81542588 | Msa1081690:intron | 30.0% | |
| TTGAATTGCAGAAGAAACAA+AGG | - | chr7_2:81542617-81542636 | Msa1081690:intron | 30.0% | |
| TGAATTGCAGAAGAAACAAA+GGG | - | chr7_2:81542618-81542637 | Msa1081690:intron | 30.0% | |
| AACTTCTTGTAGAAGTGATT+TGG | - | chr7_2:81542750-81542769 | Msa1081690:intron | 30.0% | |
| TTAAGAATTGAGCTTTGCTT+TGG | + | chr7_2:81542994-81543013 | None:intergenic | 30.0% | |
| AAAGCAAAGCTCAATTCTTA+AGG | - | chr7_2:81542993-81543012 | Msa1081690:intron | 30.0% | |
| !!! | GATTTTGAGTTCTAACCTTA+AGG | + | chr7_2:81543161-81543180 | None:intergenic | 30.0% |
| !! | AATCAATTGTTTTGCTTAGG+CGG | + | chr7_2:81543520-81543539 | None:intergenic | 30.0% |
| !! | GACAATCAATTGTTTTGCTT+AGG | + | chr7_2:81543523-81543542 | None:intergenic | 30.0% |
| AAGTAACAAGAATGAGAATG+AGG | - | chr7_2:81543795-81543814 | Msa1081690:CDS | 30.0% | |
| !! | TTCTCTTTTGAAAAGGAAAC+CGG | + | chr7_2:81543994-81544013 | None:intergenic | 30.0% |
| !!! | TGTGGTTACTTTTCTTGACA+TGG | + | chr7_2:81540087-81540106 | None:intergenic | 35.0% |
| AGATGGAGGAAAATAAATGC+AGG | + | chr7_2:81540141-81540160 | None:intergenic | 35.0% | |
| ! | TTCTCCATGACACTATCTTT+TGG | - | chr7_2:81540210-81540229 | Msa1081690:CDS | 35.0% |
| TGAACCAAAAGATAGTGTCA+TGG | + | chr7_2:81540217-81540236 | None:intergenic | 35.0% | |
| AACTTTCCATTGACAGAAAC+TGG | - | chr7_2:81540257-81540276 | Msa1081690:CDS | 35.0% | |
| TCTCATCAGTGGTAGAAAAT+GGG | - | chr7_2:81540341-81540360 | Msa1081690:CDS | 35.0% | |
| AAAATGGGAGTTGTAACTCT+TGG | - | chr7_2:81540356-81540375 | Msa1081690:CDS | 35.0% | |
| !! | AGTCTTATTGAGTTCGAGTT+TGG | - | chr7_2:81540638-81540657 | Msa1081690:CDS | 35.0% |
| ! | GTCTTATTGAGTTCGAGTTT+GGG | - | chr7_2:81540639-81540658 | Msa1081690:CDS | 35.0% |
| CAACCATAATAGGATCAGAA+GGG | + | chr7_2:81540709-81540728 | None:intergenic | 35.0% | |
| TCAACCATAATAGGATCAGA+AGG | + | chr7_2:81540710-81540729 | None:intergenic | 35.0% | |
| ! | TGTTTGTGTCGGTATTTCAT+AGG | + | chr7_2:81540744-81540763 | None:intergenic | 35.0% |
| ATGAAATACCGACACAAACA+CGG | - | chr7_2:81540744-81540763 | Msa1081690:intron | 35.0% | |
| AATATTGTCCGTGTTTGTGT+CGG | + | chr7_2:81540755-81540774 | None:intergenic | 35.0% | |
| TTTGGTAAAGGACTACATCA+GGG | + | chr7_2:81540882-81540901 | None:intergenic | 35.0% | |
| ! | ACATGATGCTCGATTTTGAA+TGG | - | chr7_2:81540907-81540926 | Msa1081690:intron | 35.0% |
| ! | GCTTTTGGCCTAAATGAATT+TGG | - | chr7_2:81541005-81541024 | Msa1081690:intron | 35.0% |
| !!! | CCGACAATGGACAATTTTTT+TGG | - | chr7_2:81541042-81541061 | Msa1081690:intron | 35.0% |
| AATAATTGGAGTTTCACGCT+AGG | + | chr7_2:81541109-81541128 | None:intergenic | 35.0% | |
| GGATAAGAATAGCCTCAAAA+TGG | + | chr7_2:81541209-81541228 | None:intergenic | 35.0% | |
| ATCAACCTATTCACTTCACA+AGG | - | chr7_2:81541452-81541471 | Msa1081690:CDS | 35.0% | |
| ! | ACATTCAACATGGTTTTCTC+TGG | - | chr7_2:81541515-81541534 | Msa1081690:CDS | 35.0% |
| ! | TCTGGTTTACATTCCAAGTT+AGG | - | chr7_2:81541533-81541552 | Msa1081690:CDS | 35.0% |
| CTAGAAACAAGAGGAAACTA+GGG | + | chr7_2:81541980-81541999 | None:intergenic | 35.0% | |
| ! | TTTCTAGGAGTGGAAGATTT+AGG | - | chr7_2:81541993-81542012 | Msa1081690:CDS | 35.0% |
| ATAGCTGCAAAATTCTGCTA+TGG | - | chr7_2:81542097-81542116 | Msa1081690:CDS | 35.0% | |
| ATTCTGCTATGGAATCAATG+TGG | - | chr7_2:81542108-81542127 | Msa1081690:CDS | 35.0% | |
| TAGCATAGCAATATTCGAGA+GGG | + | chr7_2:81542140-81542159 | None:intergenic | 35.0% | |
| ATAGCATAGCAATATTCGAG+AGG | + | chr7_2:81542141-81542160 | None:intergenic | 35.0% | |
| CTTCTGCAATTCAATGTCAA+GGG | + | chr7_2:81542611-81542630 | None:intergenic | 35.0% | |
| TCTTCTGCAATTCAATGTCA+AGG | + | chr7_2:81542612-81542631 | None:intergenic | 35.0% | |
| ! | TACTTTTCTGAATTTGGACG+AGG | - | chr7_2:81542894-81542913 | Msa1081690:intron | 35.0% |
| ! | GCAAGTGCTATGAATTTTGA+TGG | + | chr7_2:81543075-81543094 | None:intergenic | 35.0% |
| ATAGGTTCATCCGAACATTA+AGG | - | chr7_2:81543481-81543500 | Msa1081690:intron | 35.0% | |
| ACTTGTACACCTATTTGAAC+TGG | + | chr7_2:81543596-81543615 | None:intergenic | 35.0% | |
| GGACACAATCAAATCTTGTT+TGG | - | chr7_2:81543659-81543678 | Msa1081690:intron | 35.0% | |
| ! | CACAATCAAATCTTGTTTGG+TGG | - | chr7_2:81543662-81543681 | Msa1081690:intron | 35.0% |
| ! | ATCTTGTTTGGTGGTATTCA+TGG | - | chr7_2:81543671-81543690 | Msa1081690:intron | 35.0% |
| GTCAATTTCCTCAAAGATCA+GGG | - | chr7_2:81543693-81543712 | Msa1081690:intron | 35.0% | |
| TCCTAGAGATAACTATGCAT+CGG | - | chr7_2:81543742-81543761 | Msa1081690:intron | 35.0% | |
| GAGAATGAGGTTGAATGATT+TGG | - | chr7_2:81543808-81543827 | Msa1081690:CDS | 35.0% | |
| TTCCGTATTAACAGTATTCG+TGG | - | chr7_2:81543932-81543951 | Msa1081690:five_prime_UTR | 35.0% | |
| TGCCACGAATACTGTTAATA+CGG | + | chr7_2:81543937-81543956 | None:intergenic | 35.0% | |
| !! | TCTCTTTTGAAAAGGAAACC+GGG | + | chr7_2:81543993-81544012 | None:intergenic | 35.0% |
| ! | GGTTTCCTTTTCAAAAGAGA+AGG | - | chr7_2:81543993-81544012 | Msa1081690:five_prime_UTR | 35.0% |
| ACTATAGTCATGAAACTGAG+TGG | + | chr7_2:81544021-81544040 | None:intergenic | 35.0% | |
| GGAGTTTGATCTAGCAAAAA+GGG | - | chr7_2:81544155-81544174 | Msa1081690:five_prime_UTR | 35.0% | |
| GAAACACATAGTCTCATCAG+TGG | - | chr7_2:81540330-81540349 | Msa1081690:CDS | 40.0% | |
| GTCTCATCAGTGGTAGAAAA+TGG | - | chr7_2:81540340-81540359 | Msa1081690:CDS | 40.0% | |
| GAATTGAAGCCTAGTGTTTC+AGG | - | chr7_2:81540380-81540399 | Msa1081690:CDS | 40.0% | |
| GCATGTCTTATGCTTGAACT+TGG | + | chr7_2:81540422-81540441 | None:intergenic | 40.0% | |
| GTTTGGTAAAGGACTACATC+AGG | + | chr7_2:81540883-81540902 | None:intergenic | 40.0% | |
| TCGAGCATCATGTCATTGTT+TGG | + | chr7_2:81540900-81540919 | None:intergenic | 40.0% | |
| !!! | CAGGAAGAGTCTTTTTTTGC+AGG | - | chr7_2:81541385-81541404 | Msa1081690:CDS | 40.0% |
| TCACTGGAGACATCAGATAT+TGG | + | chr7_2:81541411-81541430 | None:intergenic | 40.0% | |
| TACTTGGATGGTAAGATCAC+TGG | + | chr7_2:81541427-81541446 | None:intergenic | 40.0% | |
| AGTGATCTTACCATCCAAGT+AGG | - | chr7_2:81541426-81541445 | Msa1081690:CDS | 40.0% | |
| !! | AATAGGTTGATGCTCCTACT+TGG | + | chr7_2:81541443-81541462 | None:intergenic | 40.0% |
| GGTTTACATTCCAAGTTAGG+TGG | - | chr7_2:81541536-81541555 | Msa1081690:CDS | 40.0% | |
| CTATTCATTGCCACCTAACT+TGG | + | chr7_2:81541549-81541568 | None:intergenic | 40.0% | |
| GTTAGGTGGCAATGAATAGT+TGG | - | chr7_2:81541550-81541569 | Msa1081690:CDS | 40.0% | |
| ! | CCAAGAGCTCAAAAGCATAA+TGG | + | chr7_2:81541890-81541909 | None:intergenic | 40.0% |
| ! | CCATTATGCTTTTGAGCTCT+TGG | - | chr7_2:81541887-81541906 | Msa1081690:CDS | 40.0% |
| ! | TTATGCTTTTGAGCTCTTGG+TGG | - | chr7_2:81541890-81541909 | Msa1081690:CDS | 40.0% |
| CCTAGAAACAAGAGGAAACT+AGG | + | chr7_2:81541981-81542000 | None:intergenic | 40.0% | |
| ! | CCTAGTTTCCTCTTGTTTCT+AGG | - | chr7_2:81541978-81541997 | Msa1081690:CDS | 40.0% |
| !! | TTTCCTCTTGTTTCTAGGAG+TGG | - | chr7_2:81541983-81542002 | Msa1081690:CDS | 40.0% |
| TGCAAAGAGCAACTAACTTC+TGG | - | chr7_2:81542364-81542383 | Msa1081690:intron | 40.0% | |
| AACCAGAAACACCCTTAGAT+TGG | - | chr7_2:81542437-81542456 | Msa1081690:intron | 40.0% | |
| AGAAACACCCTTAGATTGGT+GGG | - | chr7_2:81542441-81542460 | Msa1081690:intron | 40.0% | |
| GCTTACTACCAACTCAATCT+AGG | - | chr7_2:81542662-81542681 | Msa1081690:intron | 40.0% | |
| ! | GAGCTTTTCCTAGATTGAGT+TGG | + | chr7_2:81542673-81542692 | None:intergenic | 40.0% |
| ! | CTTGTAGAAGTGATTTGGAG+AGG | - | chr7_2:81542755-81542774 | Msa1081690:intron | 40.0% |
| ! | TTTTCTGAATTTGGACGAGG+TGG | - | chr7_2:81542897-81542916 | Msa1081690:intron | 40.0% |
| GAGTATGAATTTGACAGTCC+TGG | - | chr7_2:81542964-81542983 | Msa1081690:intron | 40.0% | |
| AGCTGTTGACATCTTCCTTA+AGG | - | chr7_2:81543143-81543162 | Msa1081690:intron | 40.0% | |
| TCATCCGAACATTAAGGACT+CGG | - | chr7_2:81543487-81543506 | Msa1081690:intron | 40.0% | |
| ! | TGGTAGCCTTTCATTTTGTG+CGG | + | chr7_2:81543576-81543595 | None:intergenic | 40.0% |
| GAAAGGCTACCAGTTCAAAT+AGG | - | chr7_2:81543584-81543603 | Msa1081690:intron | 40.0% | |
| GGTCAATTTCCTCAAAGATC+AGG | - | chr7_2:81543692-81543711 | Msa1081690:intron | 40.0% | |
| ACCGATGCATAGTTATCTCT+AGG | + | chr7_2:81543746-81543765 | None:intergenic | 40.0% | |
| GATTTGAAGAATTTGCGTGC+AGG | + | chr7_2:81543878-81543897 | None:intergenic | 40.0% | |
| ATTAACAGTATTCGTGGCAG+TGG | - | chr7_2:81543938-81543957 | Msa1081690:five_prime_UTR | 40.0% | |
| !! | TGGCACCTTCTCTTTTGAAA+AGG | + | chr7_2:81544001-81544020 | None:intergenic | 40.0% |
| GGGAGTTTGATCTAGCAAAA+AGG | - | chr7_2:81544154-81544173 | Msa1081690:five_prime_UTR | 40.0% | |
| AAAGGTGGTGAATGTGTGTG+TGG | + | chr7_2:81540105-81540124 | None:intergenic | 45.0% | |
| ! | GGACACTTTTCAGTGAAAGG+TGG | + | chr7_2:81540120-81540139 | None:intergenic | 45.0% |
| ! | GCAGGACACTTTTCAGTGAA+AGG | + | chr7_2:81540123-81540142 | None:intergenic | 45.0% |
| GCTTCTCCAGTTTCTGTCAA+TGG | + | chr7_2:81540266-81540285 | None:intergenic | 45.0% | |
| AGCCTAGTGTTTCAGGAAGA+AGG | - | chr7_2:81540387-81540406 | Msa1081690:CDS | 45.0% | |
| GTCCTTCTTCCTGAAACACT+AGG | + | chr7_2:81540392-81540411 | None:intergenic | 45.0% | |
| GCATAAGACATGCCACTGAA+TGG | - | chr7_2:81540429-81540448 | Msa1081690:CDS | 45.0% | |
| CCATAATAGGATCAGAAGGG+AGG | + | chr7_2:81540706-81540725 | None:intergenic | 45.0% | |
| CCTCCCTTCTGATCCTATTA+TGG | - | chr7_2:81540703-81540722 | Msa1081690:CDS | 45.0% | |
| TGTCAGTGTCTTGTCGTTGT+TGG | - | chr7_2:81540819-81540838 | Msa1081690:intron | 45.0% | |
| AATCCAAAGCTCACCGACAA+TGG | - | chr7_2:81541029-81541048 | Msa1081690:intron | 45.0% | |
| ATTGGAGTTTCACGCTAGGA+TGG | + | chr7_2:81541105-81541124 | None:intergenic | 45.0% | |
| CTTCCACTCCTAGAAACAAG+AGG | + | chr7_2:81541989-81542008 | None:intergenic | 45.0% | |
| TCAAATGCATCTACACCACC+TGG | + | chr7_2:81542076-81542095 | None:intergenic | 45.0% | |
| !! | CACCAATCTAAGGGTGTTTC+TGG | + | chr7_2:81542442-81542461 | None:intergenic | 45.0% |
| CAGAAACACCCTTAGATTGG+TGG | - | chr7_2:81542440-81542459 | Msa1081690:intron | 45.0% | |
| GAAACACCCTTAGATTGGTG+GGG | - | chr7_2:81542442-81542461 | Msa1081690:intron | 45.0% | |
| GAGTTTCCCCACCAATCTAA+GGG | + | chr7_2:81542451-81542470 | None:intergenic | 45.0% | |
| AGAGTTTCCCCACCAATCTA+AGG | + | chr7_2:81542452-81542471 | None:intergenic | 45.0% | |
| ! | GTAGAAGTGATTTGGAGAGG+CGG | - | chr7_2:81542758-81542777 | Msa1081690:intron | 45.0% |
| ! | GATCGGTTTACAACTCGATC+AGG | - | chr7_2:81542780-81542799 | Msa1081690:CDS | 45.0% |
| ATTGTGTTGTGAGCACTCGA+AGG | + | chr7_2:81542841-81542860 | None:intergenic | 45.0% | |
| AGAGTTGAATCACAGTGTCG+CGG | + | chr7_2:81543394-81543413 | None:intergenic | 45.0% | |
| AGGCTTCGAAATGCGATGAA+TGG | - | chr7_2:81543635-81543654 | Msa1081690:intron | 45.0% | |
| CTTCGAAATGCGATGAATGG+AGG | - | chr7_2:81543638-81543657 | Msa1081690:intron | 45.0% | |
| TTTCCTCAAAGATCAGGGAG+TGG | - | chr7_2:81543698-81543717 | Msa1081690:intron | 45.0% | |
| ATACCACTCCCTGATCTTTG+AGG | + | chr7_2:81543704-81543723 | None:intergenic | 45.0% | |
| CAAAGATCAGGGAGTGGTAT+AGG | - | chr7_2:81543704-81543723 | Msa1081690:intron | 45.0% | |
| !! | TTAAATTAGATTATATATTT+AGG | - | chr7_2:81540160-81540179 | Msa1081690:three_prime_UTR | 5.0% |
| TGTCCATTGTCGGTGAGCTT+TGG | + | chr7_2:81541035-81541054 | None:intergenic | 50.0% | |
| ! | GGTTGATGCTCCTACTTGGA+TGG | + | chr7_2:81541439-81541458 | None:intergenic | 50.0% |
| ! | AGTGATTTGGAGAGGCGGAT+CGG | - | chr7_2:81542763-81542782 | Msa1081690:intron | 50.0% |
| GCACTCGAAGGTGAATTCGT+TGG | + | chr7_2:81542829-81542848 | None:intergenic | 50.0% | |
| !! | GAGCTTTGCTTTGGAGATCC+AGG | + | chr7_2:81542985-81543004 | None:intergenic | 50.0% |
| AGCACTTGCAGAGCTACTTC+CGG | - | chr7_2:81543086-81543105 | Msa1081690:intron | 50.0% | |
| CTTGTAACGCGAGCATGATC+CGG | + | chr7_2:81543108-81543127 | None:intergenic | 50.0% | |
| CGCTCCGAGTCCTTAATGTT+CGG | + | chr7_2:81543494-81543513 | None:intergenic | 50.0% | |
| GCCATGCCGCACAAAATGAA+AGG | - | chr7_2:81543567-81543586 | Msa1081690:intron | 50.0% | |
| ! | GCCTTTCATTTTGTGCGGCA+TGG | + | chr7_2:81543571-81543590 | None:intergenic | 50.0% |
| TCAGGGAGTGGTATAGGAAG+TGG | - | chr7_2:81543710-81543729 | Msa1081690:intron | 50.0% | |
| AGTATTCGTGGCAGTGGAAC+TGG | - | chr7_2:81543944-81543963 | Msa1081690:five_prime_UTR | 50.0% | |
| GAAGGTCTAGTCCACAACCA+CGG | - | chr7_2:81543966-81543985 | Msa1081690:five_prime_UTR | 50.0% | |
| ACGGTCGGAAGACTTACACG+CGG | + | chr7_2:81542052-81542071 | None:intergenic | 55.0% | |
| TGCATCTACACCACCTGGCA+CGG | + | chr7_2:81542071-81542090 | None:intergenic | 55.0% | |
| CATGCTCGCGTTACAAGCGA+TGG | - | chr7_2:81543111-81543130 | Msa1081690:intron | 55.0% | |
| TTCGTGGCAGTGGAACTGGA+AGG | - | chr7_2:81543948-81543967 | Msa1081690:five_prime_UTR | 55.0% | |
| TGAAAAGGAAACCGGGACCG+TGG | + | chr7_2:81543986-81544005 | None:intergenic | 55.0% | |
| GTAAGTCTTCCGACCGTGCC+AGG | - | chr7_2:81542055-81542074 | Msa1081690:CDS | 60.0% | |
| TCTACACCACCTGGCACGGT+CGG | + | chr7_2:81542067-81542086 | None:intergenic | 60.0% | |
| ATCACAGTGTCGCGGCAGCA+AGG | + | chr7_2:81543386-81543405 | None:intergenic | 60.0% | |
| CTAGTCCACAACCACGGTCC+CGG | - | chr7_2:81543972-81543991 | Msa1081690:five_prime_UTR | 60.0% | |
| AGTCTTCCGACCGTGCCAGG+TGG | - | chr7_2:81542058-81542077 | Msa1081690:CDS | 65.0% | |
| GGAAACCGGGACCGTGGTTG+TGG | + | chr7_2:81543980-81543999 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 81540051 | 81544188 | 81540051 | ID=Msa1081690;Name=Msa1081690 |
| chr7_2 | mRNA | 81540051 | 81544188 | 81540051 | ID=Msa1081690-mRNA-1;Parent=Msa1081690;Name=Msa1081690-mRNA-1;_AED=0.17;_eAED=0.17;_QI=308|1|1|1|1|1|4|155|629 |
| chr7_2 | exon | 81540051 | 81540754 | 81540051 | ID=Msa1081690-mRNA-1:exon:20912;Parent=Msa1081690-mRNA-1 |
| chr7_2 | exon | 81541075 | 81542256 | 81541075 | ID=Msa1081690-mRNA-1:exon:20911;Parent=Msa1081690-mRNA-1 |
| chr7_2 | exon | 81542766 | 81542832 | 81542766 | ID=Msa1081690-mRNA-1:exon:20910;Parent=Msa1081690-mRNA-1 |
| chr7_2 | exon | 81543789 | 81544188 | 81543789 | ID=Msa1081690-mRNA-1:exon:20909;Parent=Msa1081690-mRNA-1 |
| chr7_2 | five_prime_UTR | 81543881 | 81544188 | 81543881 | ID=Msa1081690-mRNA-1:five_prime_utr;Parent=Msa1081690-mRNA-1 |
| chr7_2 | CDS | 81543789 | 81543880 | 81543789 | ID=Msa1081690-mRNA-1:cds;Parent=Msa1081690-mRNA-1 |
| chr7_2 | CDS | 81542766 | 81542832 | 81542766 | ID=Msa1081690-mRNA-1:cds;Parent=Msa1081690-mRNA-1 |
| chr7_2 | CDS | 81541075 | 81542256 | 81541075 | ID=Msa1081690-mRNA-1:cds;Parent=Msa1081690-mRNA-1 |
| chr7_2 | CDS | 81540206 | 81540754 | 81540206 | ID=Msa1081690-mRNA-1:cds;Parent=Msa1081690-mRNA-1 |
| chr7_2 | three_prime_UTR | 81540051 | 81540205 | 81540051 | ID=Msa1081690-mRNA-1:three_prime_utr;Parent=Msa1081690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
