AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1263740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263740 MtrunA17_Chr4g0074901 91.057 861 73 2 1 857 1 861 0.0 1540
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263740 AT1G16630.1 29.073 939 424 43 20 850 34 838 9.54e-46 177
Msa1263740 AT2G16270.1 32.591 494 202 22 8 470 12 405 2.23e-39 157
Msa1263740 AT2G16270.1 70.000 50 11 2 805 850 701 750 7.33e-11 66.6

Find 189 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTCTCAATTCAATTCTT+AGG 0.105616 8_2:-66997666 Msa1263740:five_prime_UTR
GAAAATGATGTTAAATTAAT+TGG 0.132466 8_2:-66995497 Msa1263740:CDS
ACTTCTTCGCATGGGGTTAA+TGG 0.237962 8_2:+66997474 None:intergenic
TTCCTCATAGATGGCTTATC+TGG 0.244401 8_2:+66995176 None:intergenic
ATTTCGATGGATGAGTATTT+TGG 0.246831 8_2:-66995938 Msa1263740:CDS
GTTTCTGAATTTCTTGGATT+AGG 0.259148 8_2:+66997496 None:intergenic
TGAAAGAAAGATTAGGAAAA+TGG 0.265822 8_2:+66997583 None:intergenic
TCGTTCGGAATTCGCATATT+TGG 0.274234 8_2:-66996159 Msa1263740:CDS
TTTCTGAATTTCTTGGATTA+GGG 0.289901 8_2:+66997497 None:intergenic
GTTGATACTGGTTCATTAGA+TGG 0.302929 8_2:-66996994 Msa1263740:CDS
CATCCTCCGATGATTCCTTC+TGG 0.310532 8_2:+66996494 None:intergenic
TGGTTGCTCCAACAAAATTC+TGG 0.312423 8_2:-66994593 Msa1263740:three_prime_UTR
TCTAATTCCATTAGCGGCTT+TGG 0.321351 8_2:+66996586 None:intergenic
ATTAGGAAAATGGATGAATT+AGG 0.324760 8_2:+66997593 None:intergenic
GATCATCAGCCCTTGGTGTT+TGG 0.342756 8_2:+66995600 None:intergenic
TTATGAGTCTTCTGAACTTT+CGG 0.349539 8_2:-66996242 Msa1263740:CDS
TTAATGGTTTCTGAATTTCT+TGG 0.349999 8_2:+66997490 None:intergenic
GGGTTTGATGAATTTGAAAC+TGG 0.350216 8_2:+66997517 None:intergenic
AGAACAACTTCAGCATGATA+TGG 0.356822 8_2:-66995882 Msa1263740:CDS
GTGTGAGAGAAACTAGATCT+AGG 0.366345 8_2:+66997406 None:intergenic
TTACAAACCAAAGCCGCTAA+TGG 0.368219 8_2:-66996593 Msa1263740:CDS
GGTCGCGGTGAAAATAAAAT+AGG 0.371380 8_2:-66996004 Msa1263740:CDS
GACACAGATGCTGCAATTAG+AGG 0.373147 8_2:-66995386 Msa1263740:CDS
CTGATCCTTTAGAACAGAAA+AGG 0.377539 8_2:-66997017 Msa1263740:CDS
TTTCTGAACAAAGTCCTGTT+AGG 0.378281 8_2:-66996432 Msa1263740:CDS
TTGTCCTCAGATCCAATCTT+AGG 0.380737 8_2:+66995209 None:intergenic
TAGAAATACATTCACATTGC+AGG 0.381988 8_2:+66994706 None:intergenic
ATCTCTCAATTCAATTCTTA+GGG 0.383836 8_2:-66997665 Msa1263740:five_prime_UTR
GAGTTGATTTCAGATGTTAG+AGG 0.389002 8_2:-66996109 Msa1263740:CDS
GAATCATTGTTTAGAATCAT+AGG 0.390137 8_2:+66996853 None:intergenic
GCTGGCGATCTAACCTTTGC+CGG 0.391178 8_2:+66997192 None:intergenic
TCAAGTTAAAGTACTGCAAC+TGG 0.391552 8_2:+66996071 None:intergenic
GTTAATCAGAGTCCTATCTT+TGG 0.391685 8_2:-66996025 Msa1263740:CDS
TTAGGCGTTCAAGTAGGATT+AGG 0.395224 8_2:-66994805 Msa1263740:CDS
ACAGGCACATTCCTCATAGA+TGG 0.401315 8_2:+66995167 None:intergenic
GCCTCTTCTGACTACTCCAT+GGG 0.407211 8_2:-66995005 Msa1263740:CDS
GAACAGAAAAGGGTTGATAC+TGG 0.407790 8_2:-66997006 Msa1263740:CDS
ATCCTCCGATGATTCCTTCT+GGG 0.408425 8_2:+66996495 None:intergenic
GCAACGTGTGTTTCTTGAAC+AGG 0.414525 8_2:+66995968 None:intergenic
AAATATGCCAAGTTCAAATT+CGG 0.415242 8_2:-66995573 Msa1263740:CDS
ATCTCAGCAACTTCTGAAAC+TGG 0.416066 8_2:+66995443 None:intergenic
GCATTAGCAGTGTAAGAAAC+TGG 0.418494 8_2:+66996703 None:intergenic
ACCAGTTGCAAAGCCTGCTC+TGG 0.418548 8_2:+66995647 None:intergenic
GAGGACAGTTTCATTATGTC+AGG 0.419021 8_2:-66996565 Msa1263740:CDS
ACCAGAGCAGGCTTTGCAAC+TGG 0.419706 8_2:-66995648 Msa1263740:CDS
TTCTGATGAAACTGTGAAGC+AGG 0.425432 8_2:-66996467 Msa1263740:CDS
AAAGCCGCTAATGGAATTAG+AGG 0.426519 8_2:-66996584 Msa1263740:CDS
GCGGCTTTGGTTTGTAATGA+AGG 0.426809 8_2:+66996599 None:intergenic
ATTGAATTGAAAGAAAGATT+AGG 0.429553 8_2:+66997576 None:intergenic
CGCGGGCCAATCTACTACTT+TGG 0.432526 8_2:-66995675 Msa1263740:CDS
ATCCTACTTGAACGCCTAAC+CGG 0.435617 8_2:+66994809 None:intergenic
AAAATGGATGAATTAGGAAA+TGG 0.436029 8_2:+66997599 None:intergenic
GGCCTCTTCTGACTACTCCA+TGG 0.438649 8_2:-66995006 Msa1263740:CDS
GTTGATTTCGATGTTGCAGC+TGG 0.440851 8_2:+66997174 None:intergenic
AAAAGATCAGTTTATGAAAC+CGG 0.441090 8_2:-66997211 Msa1263740:CDS
TGAACATTTAGATGCAAAGT+TGG 0.442587 8_2:-66995756 Msa1263740:CDS
CTGTCCTCTAATTCCATTAG+CGG 0.445999 8_2:+66996580 None:intergenic
GAACAACTTCAGCATGATAT+GGG 0.446308 8_2:-66995881 Msa1263740:CDS
TCTGGCAAGAGAGTCCTAAC+AGG 0.449217 8_2:+66996418 None:intergenic
ATTTCAATCACAAATTCTCC+AGG 0.449988 8_2:-66996298 Msa1263740:CDS
ATGAGGGAAGGTTTAGAGAA+TGG 0.450468 8_2:+66997439 None:intergenic
AAAGATACCTGAAGGACTAT+TGG 0.453579 8_2:+66997378 None:intergenic
GAGGAATGTGCCTGTAGAAA+TGG 0.458705 8_2:-66995159 Msa1263740:CDS
TCCTCATAGATGGCTTATCT+GGG 0.459174 8_2:+66995177 None:intergenic
CTATACTTGCTGCTTTGTGC+AGG 0.459222 8_2:-66995317 Msa1263740:CDS
ACTCTCTCCTGTGGTAATTC+CGG 0.462561 8_2:+66995033 None:intergenic
ACTGGAGGAGTAGCCGCGGC+TGG 0.464928 8_2:+66996721 None:intergenic
CGGTGACTCAGCCATCTTGA+AGG 0.465883 8_2:+66997119 None:intergenic
CCGACAACAAAATTCATGTT+CGG 0.467578 8_2:-66997053 Msa1263740:CDS
TGAATTTCCGAATTTGAACT+TGG 0.469755 8_2:+66995566 None:intergenic
TCCAGGGTCTCATGCTGTGT+TGG 0.473321 8_2:-66996281 Msa1263740:CDS
TAATGAAGGAATTGTGGCCT+AGG 0.475030 8_2:+66996613 None:intergenic
CCTGAGAAACTTCTTCGCAT+GGG 0.479169 8_2:+66997466 None:intergenic
CACTGGATTTGAAAATGCAT+TGG 0.480475 8_2:-66995852 Msa1263740:CDS
TGAGTCCAATGTTGTTCCTA+TGG 0.481899 8_2:-66996911 Msa1263740:CDS
TGATCCTTTAGAACAGAAAA+GGG 0.482946 8_2:-66997016 Msa1263740:CDS
ACTCCCGCCAATAGTCCTTC+AGG 0.484257 8_2:-66997385 Msa1263740:intron
GTTCTACCAAAGTAGTAGAT+TGG 0.488968 8_2:+66995669 None:intergenic
CCAACCACGTCCATTTCTAC+AGG 0.492594 8_2:+66995149 None:intergenic
CTTGCTGCTTTGTGCAGGTA+CGG 0.493645 8_2:-66995312 Msa1263740:CDS
CATGATATGGGGATGAACAC+TGG 0.495085 8_2:-66995869 Msa1263740:CDS
TCCATGGGTTCACCATCCTA+TGG 0.496368 8_2:-66994990 Msa1263740:CDS
TCCTGAGAAACTTCTTCGCA+TGG 0.501589 8_2:+66997465 None:intergenic
TCTGATTCTATATAAGTAGC+AGG 0.505688 8_2:+66995794 None:intergenic
TTGATACTGGTTCATTAGAT+GGG 0.506576 8_2:-66996993 Msa1263740:CDS
AGCATCAACAAGAGGGTCTA+CGG 0.513163 8_2:+66996681 None:intergenic
ATACATTGTTAGACTTCCAT+AGG 0.513338 8_2:+66994974 None:intergenic
CAAAATGAAGTCTGTGGTGA+AGG 0.513393 8_2:-66995545 Msa1263740:CDS
CCCATGCGAAGAAGTTTCTC+AGG 0.514117 8_2:-66997466 Msa1263740:CDS
GCTGGACTAAGCTTAAAAGT+AGG 0.515924 8_2:+66996739 None:intergenic
CAGCTGATATTCCCACTGCT+TGG 0.516834 8_2:+66995408 None:intergenic
GAATCATTGTTTCTAATCAA+AGG 0.517302 8_2:+66996781 None:intergenic
CAGACTCACAACTCGGAAAG+AGG 0.517493 8_2:+66996959 None:intergenic
TTATATAGAATCAGAAGAGC+AGG 0.518245 8_2:-66995786 Msa1263740:CDS
TCAAAGCTGCTCATTTCTGA+AGG 0.519677 8_2:+66995116 None:intergenic
TGAAGATGCTTTAGAGTCTG+AGG 0.522367 8_2:-66995705 Msa1263740:CDS
AGAGAAAACAGTTGAAGCAA+AGG 0.522792 8_2:-66996398 Msa1263740:CDS
TGCCACTTCTCCTGTATAAG+CGG 0.524540 8_2:-66994777 Msa1263740:exon
TGCAAAGTTATGCGCAGGTT+AGG 0.531346 8_2:+66994731 None:intergenic
GGAATTGTGGCCTAGGGGAT+AGG 0.532945 8_2:+66996620 None:intergenic
AAGATTGAGAAATGAAGAGA+AGG 0.534368 8_2:+66997693 None:intergenic
TCTAGGGTTAGCGGCAATGA+GGG 0.540403 8_2:+66997423 None:intergenic
TTGATGAATTTGAAACTGGA+GGG 0.540624 8_2:+66997521 None:intergenic
TGATGAATTTGAAACTGGAG+GGG 0.545019 8_2:+66997522 None:intergenic
GGTTTGTAATGAAGGAATTG+TGG 0.549064 8_2:+66996607 None:intergenic
TTCATCAGACTGAGTATCCT+CGG 0.550240 8_2:+66996519 None:intergenic
GATACCTGAAGGACTATTGG+CGG 0.550722 8_2:+66997381 None:intergenic
GATGAATTAGGAAATGGAAG+TGG 0.552353 8_2:+66997605 None:intergenic
AGGAGATAGTTACTCCGGTT+AGG 0.555208 8_2:-66994823 Msa1263740:CDS
ATGCGCAGGTTAGGTGATGT+AGG 0.556396 8_2:+66994740 None:intergenic
TGTGAGAGAAACTAGATCTA+GGG 0.557213 8_2:+66997407 None:intergenic
ATCTGAAATCAACTCAGAGA+TGG 0.558056 8_2:+66996117 None:intergenic
GGGGATTTGTCGTTGTTGAG+AGG 0.558491 8_2:+66997541 None:intergenic
GAAACTAGATCTAGGGTTAG+CGG 0.559957 8_2:+66997414 None:intergenic
TCTGTGGAGAAGCCTAAGAT+TGG 0.560840 8_2:-66995221 Msa1263740:CDS
TCCATAGGATGGTGAACCCA+TGG 0.561266 8_2:+66994989 None:intergenic
TTTGATGAATTTGAAACTGG+AGG 0.561812 8_2:+66997520 None:intergenic
CTGGACTAAGCTTAAAAGTA+GGG 0.562564 8_2:+66996740 None:intergenic
TACTTTGGTAGAACCAGAGC+AGG 0.564168 8_2:-66995660 Msa1263740:CDS
AATGAAGGAATTGTGGCCTA+GGG 0.570744 8_2:+66996614 None:intergenic
TCAGTTTATGAAACCGGCAA+AGG 0.571045 8_2:-66997205 Msa1263740:CDS
AGGTATGCAAAGTTATGCGC+AGG 0.572134 8_2:+66994726 None:intergenic
TGAACTTTCGGAGTTTGCAA+AGG 0.572896 8_2:-66996230 Msa1263740:CDS
TTTATAGGGACGCGGCGAAG+AGG 0.574213 8_2:-66994843 Msa1263740:intron
CAACAAAATTCATGTTCGGA+AGG 0.575732 8_2:-66997049 Msa1263740:CDS
ATCATCCATAGGAACAACAT+TGG 0.578422 8_2:+66996906 None:intergenic
AGGTAATGTAGATACAAAGC+TGG 0.578760 8_2:-66995525 Msa1263740:CDS
TTACCACAGGAGAGAGTCGT+TGG 0.578772 8_2:-66995027 Msa1263740:CDS
ATTGTTAGACTTCCATAGGA+TGG 0.578999 8_2:+66994978 None:intergenic
CTGAGAAACTTCTTCGCATG+GGG 0.580112 8_2:+66997467 None:intergenic
AGAGTCTGAGGAAGCACTCG+CGG 0.581478 8_2:-66995693 Msa1263740:CDS
CCTGTAGAAATGGACGTGGT+TGG 0.581689 8_2:-66995149 Msa1263740:CDS
GAAGCCTAAGATTGGATCTG+AGG 0.582716 8_2:-66995213 Msa1263740:CDS
GAGTCTGAGGAAGCACTCGC+GGG 0.584357 8_2:-66995692 Msa1263740:CDS
ATACCTGAAGGACTATTGGC+GGG 0.584843 8_2:+66997382 None:intergenic
TCCAACACAGCATGAGACCC+TGG 0.586313 8_2:+66996280 None:intergenic
ACACAGATGCTGCAATTAGA+GGG 0.588423 8_2:-66995385 Msa1263740:CDS
GGGTTAGCGGCAATGAGGGA+AGG 0.589585 8_2:+66997427 None:intergenic
CAGAGTCCTATCTTTGGTCG+CGG 0.593626 8_2:-66996019 Msa1263740:CDS
CAAAGCTGCTCATTTCTGAA+GGG 0.594529 8_2:+66995117 None:intergenic
GATCTCTGCTTCCTTCAAGA+TGG 0.595344 8_2:-66997130 Msa1263740:CDS
TAAGCTTAAAAGTAGGGTCA+AGG 0.597364 8_2:+66996746 None:intergenic
GTTGAATCAGTATACTCAGA+AGG 0.600194 8_2:-66995626 Msa1263740:CDS
AACCGCTTATACAGGAGAAG+TGG 0.600502 8_2:+66994775 None:intergenic
AAGAGAAGGTGTGACTGTAA+CGG 0.600705 8_2:+66997707 None:intergenic
AAACAAATTACCTATCCCCT+AGG 0.602260 8_2:-66996630 Msa1263740:CDS
GAGGAATCAGCATCAACAAG+AGG 0.603625 8_2:+66996673 None:intergenic
ATCTAGGGTTAGCGGCAATG+AGG 0.603945 8_2:+66997422 None:intergenic
CCCCAGATAAGCCATCTATG+AGG 0.606478 8_2:-66995178 Msa1263740:CDS
ACGTGTGTTTCTTGAACAGG+AGG 0.607471 8_2:+66995971 None:intergenic
CAAGTTAAAGTACTGCAACT+GGG 0.609993 8_2:+66996072 None:intergenic
AAAAGCGCCGGAATTACCAC+AGG 0.610343 8_2:-66995040 Msa1263740:CDS
AAATCTTCAGACTCACAACT+CGG 0.613094 8_2:+66996952 None:intergenic
CGTTGCCTCAGAGATTTCGA+TGG 0.613875 8_2:-66995951 Msa1263740:CDS
TGAATCCCAGAAGGAATCAT+CGG 0.616386 8_2:-66996500 Msa1263740:CDS
GAAATTCAAAATGAAGTCTG+TGG 0.622812 8_2:-66995551 Msa1263740:CDS
TTTCAATCACAAATTCTCCA+GGG 0.626416 8_2:-66996297 Msa1263740:CDS
TAGGCTCGTTCCTCTCCGCA+AGG 0.628949 8_2:+66997085 None:intergenic
TTGTTGTCGGAAGAAGGAGT+AGG 0.632543 8_2:+66997066 None:intergenic
CGAAGAGGAGATAGTTACTC+CGG 0.635705 8_2:-66994828 Msa1263740:CDS
ACCCATGGAGTAGTCAGAAG+AGG 0.635753 8_2:+66995004 None:intergenic
AATGTATGAGAAAATTCCAA+AGG 0.637812 8_2:-66994958 Msa1263740:intron
CTCCGGTTAGGCGTTCAAGT+AGG 0.639790 8_2:-66994811 Msa1263740:CDS
ATTGGATGCTCAAGAATCTG+AGG 0.642965 8_2:-66995834 Msa1263740:CDS
TTATACGACAAATCATCCAT+AGG 0.646153 8_2:+66996895 None:intergenic
TCAGTCTGATGAATCCCAGA+AGG 0.647686 8_2:-66996509 Msa1263740:CDS
AACAACTTCAGCATGATATG+GGG 0.647874 8_2:-66995880 Msa1263740:CDS
AGGAATCAGCATCAACAAGA+GGG 0.648359 8_2:+66996674 None:intergenic
TTCGATCTCAAAGAAAAGCG+TGG 0.648845 8_2:+66996364 None:intergenic
TTGAAGGAAGCAGAGATCGT+CGG 0.654068 8_2:+66997135 None:intergenic
TTCAGATACAGATGTTACCG+AGG 0.656226 8_2:-66996536 Msa1263740:CDS
GAAAGAAAATCCTTGCGGAG+AGG 0.661412 8_2:-66997095 Msa1263740:CDS
CTCATCCATCGAAATCTCTG+AGG 0.661658 8_2:+66995946 None:intergenic
CACACGGATGACCAAGCAGT+GGG 0.663869 8_2:-66995419 Msa1263740:CDS
CCTCATAGATGGCTTATCTG+GGG 0.670344 8_2:+66995178 None:intergenic
AGAAGGAGACCAAACACCAA+GGG 0.671884 8_2:-66995609 Msa1263740:CDS
GAATCTGAGGAAGTGCACAA+TGG 0.672121 8_2:-66995821 Msa1263740:CDS
CAGAAGGAGACCAAACACCA+AGG 0.672990 8_2:-66995610 Msa1263740:CDS
ACCGAGAAAGAAAATCCTTG+CGG 0.686892 8_2:-66997100 Msa1263740:CDS
ATCCCAGAAGGAATCATCGG+AGG 0.688240 8_2:-66996497 Msa1263740:CDS
AGAAACTGGAGGAGTAGCCG+CGG 0.691010 8_2:+66996717 None:intergenic
ACACACGGATGACCAAGCAG+TGG 0.696307 8_2:-66995420 Msa1263740:CDS
AGGCCAACGACTCTCTCCTG+TGG 0.696396 8_2:+66995024 None:intergenic
ATGAAGGAATTGTGGCCTAG+GGG 0.699302 8_2:+66996615 None:intergenic
AGAAGTTGCTGAGATACACA+CGG 0.700965 8_2:-66995435 Msa1263740:CDS
TGTGCCTGTAGAAATGGACG+TGG 0.719113 8_2:-66995153 Msa1263740:CDS
TTAGCAGTGTAAGAAACTGG+AGG 0.719518 8_2:+66996706 None:intergenic
CGTGTGTTTCTTGAACAGGA+GGG 0.721446 8_2:+66995972 None:intergenic
AGGGTCATAAGGTGGCACAG+AGG 0.740482 8_2:+66996654 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTTTATGTATTAATTT+TGG - chr8_2:66995003-66995022 Msa1263740:CDS 10.0%
!!! TATTTTTTATTAATGAATGA+TGG - chr8_2:66997684-66997703 Msa1263740:five_prime_UTR 10.0%
!! GAAAATGATGTTAAATTAAT+TGG - chr8_2:66996800-66996819 Msa1263740:CDS 15.0%
!!! TTCATCATATTGTTTTTTAT+AGG - chr8_2:66997439-66997458 Msa1263740:CDS 15.0%
!!! TCATCATATTGTTTTTTATA+GGG - chr8_2:66997440-66997459 Msa1263740:CDS 15.0%
!! ATTGAATTGAAAGAAAGATT+AGG + chr8_2:66994724-66994743 None:intergenic 20.0%
!! ATTTCAAATTTAATCTGTGT+TGG - chr8_2:66994981-66995000 Msa1263740:CDS 20.0%
! AATCTCTCAATTCAATTCTT+AGG - chr8_2:66994631-66994650 Msa1263740:three_prime_UTR 25.0%
! ATCTCTCAATTCAATTCTTA+GGG - chr8_2:66994632-66994651 Msa1263740:three_prime_UTR 25.0%
! AAAATGGATGAATTAGGAAA+TGG + chr8_2:66994701-66994720 None:intergenic 25.0%
! ATTAGGAAAATGGATGAATT+AGG + chr8_2:66994707-66994726 None:intergenic 25.0%
! TGAAAGAAAGATTAGGAAAA+TGG + chr8_2:66994717-66994736 None:intergenic 25.0%
! TTTCTGAATTTCTTGGATTA+GGG + chr8_2:66994803-66994822 None:intergenic 25.0%
! TTAATGGTTTCTGAATTTCT+TGG + chr8_2:66994810-66994829 None:intergenic 25.0%
! AAAAGATCAGTTTATGAAAC+CGG - chr8_2:66995086-66995105 Msa1263740:CDS 25.0%
!! GAATCATTGTTTAGAATCAT+AGG + chr8_2:66995447-66995466 None:intergenic 25.0%
!!! AAAGGAACATTTTGAAATGA+GGG + chr8_2:66995501-66995520 None:intergenic 25.0%
!!! GAATCATTGTTTCTAATCAA+AGG + chr8_2:66995519-66995538 None:intergenic 25.0%
!!! TAATTTGTTTTAGGGTCATA+AGG + chr8_2:66995657-66995676 None:intergenic 25.0%
! AAATATGCCAAGTTCAAATT+CGG - chr8_2:66996724-66996743 Msa1263740:CDS 25.0%
! AATGTATGAGAAAATTCCAA+AGG - chr8_2:66997339-66997358 Msa1263740:intron 25.0%
AAGATTGAGAAATGAAGAGA+AGG + chr8_2:66994607-66994626 None:intergenic 30.0%
! TTGATGAATTTGAAACTGGA+GGG + chr8_2:66994779-66994798 None:intergenic 30.0%
! TTTGATGAATTTGAAACTGG+AGG + chr8_2:66994780-66994799 None:intergenic 30.0%
GTTTCTGAATTTCTTGGATT+AGG + chr8_2:66994804-66994823 None:intergenic 30.0%
TGAAAGAAAAAGATACCTGA+AGG + chr8_2:66994930-66994949 None:intergenic 30.0%
!! TGATCCTTTAGAACAGAAAA+GGG - chr8_2:66995281-66995300 Msa1263740:CDS 30.0%
!! TTGATACTGGTTCATTAGAT+GGG - chr8_2:66995304-66995323 Msa1263740:CDS 30.0%
TTATACGACAAATCATCCAT+AGG + chr8_2:66995405-66995424 None:intergenic 30.0%
!!! CAAAGGAACATTTTGAAATG+AGG + chr8_2:66995502-66995521 None:intergenic 30.0%
!!! GGGATAGGTAATTTGTTTTA+GGG + chr8_2:66995665-66995684 None:intergenic 30.0%
ATTTCAATCACAAATTCTCC+AGG - chr8_2:66995999-66996018 Msa1263740:CDS 30.0%
TTTCAATCACAAATTCTCCA+GGG - chr8_2:66996000-66996019 Msa1263740:CDS 30.0%
TTATGAGTCTTCTGAACTTT+CGG - chr8_2:66996055-66996074 Msa1263740:CDS 30.0%
!! AAAATTCGCTTTTGCAAACT+GGG + chr8_2:66996111-66996130 None:intergenic 30.0%
! ATTTCGATGGATGAGTATTT+TGG - chr8_2:66996359-66996378 Msa1263740:CDS 30.0%
TCTGATTCTATATAAGTAGC+AGG + chr8_2:66996506-66996525 None:intergenic 30.0%
TTATATAGAATCAGAAGAGC+AGG - chr8_2:66996511-66996530 Msa1263740:CDS 30.0%
TGAACATTTAGATGCAAAGT+TGG - chr8_2:66996541-66996560 Msa1263740:CDS 30.0%
TGAATTTCCGAATTTGAACT+TGG + chr8_2:66996734-66996753 None:intergenic 30.0%
GAAATTCAAAATGAAGTCTG+TGG - chr8_2:66996746-66996765 Msa1263740:CDS 30.0%
! AAGTATAGCACAATGTTTTG+AGG + chr8_2:66996968-66996987 None:intergenic 30.0%
ATACATTGTTAGACTTCCAT+AGG + chr8_2:66997326-66997345 None:intergenic 30.0%
!!! TATTGTTTTTTATAGGGACG+CGG - chr8_2:66997446-66997465 Msa1263740:CDS 30.0%
TAGAAATACATTCACATTGC+AGG + chr8_2:66997594-66997613 None:intergenic 30.0%
GATGAATTAGGAAATGGAAG+TGG + chr8_2:66994695-66994714 None:intergenic 35.0%
! TGATGAATTTGAAACTGGAG+GGG + chr8_2:66994778-66994797 None:intergenic 35.0%
! GGGTTTGATGAATTTGAAAC+TGG + chr8_2:66994783-66994802 None:intergenic 35.0%
TGTGAGAGAAACTAGATCTA+GGG + chr8_2:66994893-66994912 None:intergenic 35.0%
AAAGATACCTGAAGGACTAT+TGG + chr8_2:66994922-66994941 None:intergenic 35.0%
!! TGAATTTTGTTGTCGGAAGA+AGG + chr8_2:66995240-66995259 None:intergenic 35.0%
!! CCGAACATGAATTTTGTTGT+CGG + chr8_2:66995247-66995266 None:intergenic 35.0%
CCGACAACAAAATTCATGTT+CGG - chr8_2:66995244-66995263 Msa1263740:CDS 35.0%
CAACAAAATTCATGTTCGGA+AGG - chr8_2:66995248-66995267 Msa1263740:CDS 35.0%
!! CTGATCCTTTAGAACAGAAA+AGG - chr8_2:66995280-66995299 Msa1263740:CDS 35.0%
! TCAACCCTTTTCTGTTCTAA+AGG + chr8_2:66995288-66995307 None:intergenic 35.0%
!! GTTGATACTGGTTCATTAGA+TGG - chr8_2:66995303-66995322 Msa1263740:CDS 35.0%
AAATCTTCAGACTCACAACT+CGG + chr8_2:66995348-66995367 None:intergenic 35.0%
ATCATCCATAGGAACAACAT+TGG + chr8_2:66995394-66995413 None:intergenic 35.0%
TAAGCTTAAAAGTAGGGTCA+AGG + chr8_2:66995554-66995573 None:intergenic 35.0%
CTGGACTAAGCTTAAAAGTA+GGG + chr8_2:66995560-66995579 None:intergenic 35.0%
!!! TTTGTTTTAGGGTCATAAGG+TGG + chr8_2:66995654-66995673 None:intergenic 35.0%
!!! GGGGATAGGTAATTTGTTTT+AGG + chr8_2:66995666-66995685 None:intergenic 35.0%
AAACAAATTACCTATCCCCT+AGG - chr8_2:66995667-66995686 Msa1263740:CDS 35.0%
GGTTTGTAATGAAGGAATTG+TGG + chr8_2:66995693-66995712 None:intergenic 35.0%
TTTCTGAACAAAGTCCTGTT+AGG - chr8_2:66995865-66995884 Msa1263740:CDS 35.0%
! TTTGCTTCAACTGTTTTCTC+TGG + chr8_2:66995900-66995919 None:intergenic 35.0%
AGAGAAAACAGTTGAAGCAA+AGG - chr8_2:66995899-66995918 Msa1263740:CDS 35.0%
! TGTGTTGGAAGACTTTTATG+AGG - chr8_2:66996031-66996050 Msa1263740:CDS 35.0%
!! CAAAATTCGCTTTTGCAAAC+TGG + chr8_2:66996112-66996131 None:intergenic 35.0%
! TTTGCAAAAGCGAATTTTGC+AGG - chr8_2:66996113-66996132 Msa1263740:CDS 35.0%
! ATCTGAAATCAACTCAGAGA+TGG + chr8_2:66996183-66996202 None:intergenic 35.0%
! GAGTTGATTTCAGATGTTAG+AGG - chr8_2:66996188-66996207 Msa1263740:CDS 35.0%
!! CAAGTTAAAGTACTGCAACT+GGG + chr8_2:66996228-66996247 None:intergenic 35.0%
!! TCAAGTTAAAGTACTGCAAC+TGG + chr8_2:66996229-66996248 None:intergenic 35.0%
GTTAATCAGAGTCCTATCTT+TGG - chr8_2:66996272-66996291 Msa1263740:CDS 35.0%
AGAACAACTTCAGCATGATA+TGG - chr8_2:66996415-66996434 Msa1263740:CDS 35.0%
GAACAACTTCAGCATGATAT+GGG - chr8_2:66996416-66996435 Msa1263740:CDS 35.0%
AACAACTTCAGCATGATATG+GGG - chr8_2:66996417-66996436 Msa1263740:CDS 35.0%
CACTGGATTTGAAAATGCAT+TGG - chr8_2:66996445-66996464 Msa1263740:CDS 35.0%
GTTCTACCAAAGTAGTAGAT+TGG + chr8_2:66996631-66996650 None:intergenic 35.0%
GTTGAATCAGTATACTCAGA+AGG - chr8_2:66996671-66996690 Msa1263740:CDS 35.0%
AGGTAATGTAGATACAAAGC+TGG - chr8_2:66996772-66996791 Msa1263740:CDS 35.0%
!! CAAAAAGTTTACTAGCTCTG+TGG - chr8_2:66997060-66997079 Msa1263740:CDS 35.0%
ATTGTTAGACTTCCATAGGA+TGG + chr8_2:66997322-66997341 None:intergenic 35.0%
CAATCAACAATACTCACCTT+TGG + chr8_2:66997358-66997377 None:intergenic 35.0%
ATGAGGGAAGGTTTAGAGAA+TGG + chr8_2:66994861-66994880 None:intergenic 40.0%
! GAAACTAGATCTAGGGTTAG+CGG + chr8_2:66994886-66994905 None:intergenic 40.0%
GTGTGAGAGAAACTAGATCT+AGG + chr8_2:66994894-66994913 None:intergenic 40.0%
TCAGTTTATGAAACCGGCAA+AGG - chr8_2:66995092-66995111 Msa1263740:CDS 40.0%
ACCGAGAAAGAAAATCCTTG+CGG - chr8_2:66995197-66995216 Msa1263740:CDS 40.0%
! TCCGCAAGGATTTTCTTTCT+CGG + chr8_2:66995201-66995220 None:intergenic 40.0%
!! GAACAGAAAAGGGTTGATAC+TGG - chr8_2:66995291-66995310 Msa1263740:CDS 40.0%
TGAGTCCAATGTTGTTCCTA+TGG - chr8_2:66995386-66995405 Msa1263740:CDS 40.0%
GCTGGACTAAGCTTAAAAGT+AGG + chr8_2:66995561-66995580 None:intergenic 40.0%
TTAGCAGTGTAAGAAACTGG+AGG + chr8_2:66995594-66995613 None:intergenic 40.0%
GCATTAGCAGTGTAAGAAAC+TGG + chr8_2:66995597-66995616 None:intergenic 40.0%
AGGAATCAGCATCAACAAGA+GGG + chr8_2:66995626-66995645 None:intergenic 40.0%
AATGAAGGAATTGTGGCCTA+GGG + chr8_2:66995686-66995705 None:intergenic 40.0%
TAATGAAGGAATTGTGGCCT+AGG + chr8_2:66995687-66995706 None:intergenic 40.0%
TTACAAACCAAAGCCGCTAA+TGG - chr8_2:66995704-66995723 Msa1263740:CDS 40.0%
TCTAATTCCATTAGCGGCTT+TGG + chr8_2:66995714-66995733 None:intergenic 40.0%
AAAGCCGCTAATGGAATTAG+AGG - chr8_2:66995713-66995732 Msa1263740:CDS 40.0%
CTGTCCTCTAATTCCATTAG+CGG + chr8_2:66995720-66995739 None:intergenic 40.0%
GAGGACAGTTTCATTATGTC+AGG - chr8_2:66995732-66995751 Msa1263740:CDS 40.0%
TTCAGATACAGATGTTACCG+AGG - chr8_2:66995761-66995780 Msa1263740:CDS 40.0%
TTCATCAGACTGAGTATCCT+CGG + chr8_2:66995781-66995800 None:intergenic 40.0%
TGAATCCCAGAAGGAATCAT+CGG - chr8_2:66995797-66995816 Msa1263740:CDS 40.0%
TTCTGATGAAACTGTGAAGC+AGG - chr8_2:66995830-66995849 Msa1263740:CDS 40.0%
TTCGATCTCAAAGAAAAGCG+TGG + chr8_2:66995936-66995955 None:intergenic 40.0%
!!! ACGCTTTTCTTTGAGATCGA+AGG - chr8_2:66995935-66995954 Msa1263740:CDS 40.0%
TGAACTTTCGGAGTTTGCAA+AGG - chr8_2:66996067-66996086 Msa1263740:CDS 40.0%
! CGAATTTTGCAGGTTTCGTT+CGG - chr8_2:66996123-66996142 Msa1263740:CDS 40.0%
TCGTTCGGAATTCGCATATT+TGG - chr8_2:66996138-66996157 Msa1263740:CDS 40.0%
GGTCGCGGTGAAAATAAAAT+AGG - chr8_2:66996293-66996312 Msa1263740:CDS 40.0%
ATTGGATGCTCAAGAATCTG+AGG - chr8_2:66996463-66996482 Msa1263740:CDS 40.0%
!! TGAAGATGCTTTAGAGTCTG+AGG - chr8_2:66996592-66996611 Msa1263740:CDS 40.0%
! TTTTCATGATCATCAGCCCT+TGG + chr8_2:66996707-66996726 None:intergenic 40.0%
CAAAATGAAGTCTGTGGTGA+AGG - chr8_2:66996752-66996771 Msa1263740:CDS 40.0%
!! ATCTCAGCAACTTCTGAAAC+TGG + chr8_2:66996857-66996876 None:intergenic 40.0%
AGAAGTTGCTGAGATACACA+CGG - chr8_2:66996862-66996881 Msa1263740:CDS 40.0%
ACACAGATGCTGCAATTAGA+GGG - chr8_2:66996912-66996931 Msa1263740:CDS 40.0%
! TTGCAGGTGCAACTTTTAAC+TGG - chr8_2:66997014-66997033 Msa1263740:CDS 40.0%
!! GTGCAACTTTTAACTGGTCA+AGG - chr8_2:66997020-66997039 Msa1263740:CDS 40.0%
TTGTCCTCAGATCCAATCTT+AGG + chr8_2:66997091-66997110 None:intergenic 40.0%
TCCTCATAGATGGCTTATCT+GGG + chr8_2:66997123-66997142 None:intergenic 40.0%
TTCCTCATAGATGGCTTATC+TGG + chr8_2:66997124-66997143 None:intergenic 40.0%
CAAAGCTGCTCATTTCTGAA+GGG + chr8_2:66997183-66997202 None:intergenic 40.0%
TCAAAGCTGCTCATTTCTGA+AGG + chr8_2:66997184-66997203 None:intergenic 40.0%
TTAGGCGTTCAAGTAGGATT+AGG - chr8_2:66997492-66997511 Msa1263740:CDS 40.0%
ACTTCTTCGCATGGGGTTAA+TGG + chr8_2:66994826-66994845 None:intergenic 45.0%
CTGAGAAACTTCTTCGCATG+GGG + chr8_2:66994833-66994852 None:intergenic 45.0%
CCTGAGAAACTTCTTCGCAT+GGG + chr8_2:66994834-66994853 None:intergenic 45.0%
TCCTGAGAAACTTCTTCGCA+TGG + chr8_2:66994835-66994854 None:intergenic 45.0%
ATACCTGAAGGACTATTGGC+GGG + chr8_2:66994918-66994937 None:intergenic 45.0%
GATACCTGAAGGACTATTGG+CGG + chr8_2:66994919-66994938 None:intergenic 45.0%
! GTTGATTTCGATGTTGCAGC+TGG + chr8_2:66995126-66995145 None:intergenic 45.0%
TTGAAGGAAGCAGAGATCGT+CGG + chr8_2:66995165-66995184 None:intergenic 45.0%
GATCTCTGCTTCCTTCAAGA+TGG - chr8_2:66995167-66995186 Msa1263740:CDS 45.0%
GAAAGAAAATCCTTGCGGAG+AGG - chr8_2:66995202-66995221 Msa1263740:CDS 45.0%
TTGTTGTCGGAAGAAGGAGT+AGG + chr8_2:66995234-66995253 None:intergenic 45.0%
! TTTTAAGCTTAGTCCAGCCG+CGG - chr8_2:66995563-66995582 Msa1263740:CDS 45.0%
AGCATCAACAAGAGGGTCTA+CGG + chr8_2:66995619-66995638 None:intergenic 45.0%
GAGGAATCAGCATCAACAAG+AGG + chr8_2:66995627-66995646 None:intergenic 45.0%
ATGAAGGAATTGTGGCCTAG+GGG + chr8_2:66995685-66995704 None:intergenic 45.0%
!! GCGGCTTTGGTTTGTAATGA+AGG + chr8_2:66995701-66995720 None:intergenic 45.0%
TCAGTCTGATGAATCCCAGA+AGG - chr8_2:66995788-66995807 Msa1263740:CDS 45.0%
ATCCTCCGATGATTCCTTCT+GGG + chr8_2:66995805-66995824 None:intergenic 45.0%
! TTTTCACCGCGACCAAAGAT+AGG + chr8_2:66996287-66996306 None:intergenic 45.0%
CGTGTGTTTCTTGAACAGGA+GGG + chr8_2:66996328-66996347 None:intergenic 45.0%
ACGTGTGTTTCTTGAACAGG+AGG + chr8_2:66996329-66996348 None:intergenic 45.0%
GCAACGTGTGTTTCTTGAAC+AGG + chr8_2:66996332-66996351 None:intergenic 45.0%
CTCATCCATCGAAATCTCTG+AGG + chr8_2:66996354-66996373 None:intergenic 45.0%
CATGATATGGGGATGAACAC+TGG - chr8_2:66996428-66996447 Msa1263740:CDS 45.0%
! GAATCTGAGGAAGTGCACAA+TGG - chr8_2:66996476-66996495 Msa1263740:CDS 45.0%
TACTTTGGTAGAACCAGAGC+AGG - chr8_2:66996637-66996656 Msa1263740:CDS 45.0%
AGAAGGAGACCAAACACCAA+GGG - chr8_2:66996688-66996707 Msa1263740:CDS 45.0%
GACACAGATGCTGCAATTAG+AGG - chr8_2:66996911-66996930 Msa1263740:CDS 45.0%
!! CTATACTTGCTGCTTTGTGC+AGG - chr8_2:66996980-66996999 Msa1263740:CDS 45.0%
! GCAGGTACGGTTTTTATTGC+AGG - chr8_2:66996998-66997017 Msa1263740:CDS 45.0%
TCTGTGGAGAAGCCTAAGAT+TGG - chr8_2:66997076-66997095 Msa1263740:CDS 45.0%
GAAGCCTAAGATTGGATCTG+AGG - chr8_2:66997084-66997103 Msa1263740:CDS 45.0%
CCTCATAGATGGCTTATCTG+GGG + chr8_2:66997122-66997141 None:intergenic 45.0%
ACAGGCACATTCCTCATAGA+TGG + chr8_2:66997133-66997152 None:intergenic 45.0%
GAGGAATGTGCCTGTAGAAA+TGG - chr8_2:66997138-66997157 Msa1263740:CDS 45.0%
ACTCTCTCCTGTGGTAATTC+CGG + chr8_2:66997267-66997286 None:intergenic 45.0%
CGAAGAGGAGATAGTTACTC+CGG - chr8_2:66997469-66997488 Msa1263740:CDS 45.0%
AGGAGATAGTTACTCCGGTT+AGG - chr8_2:66997474-66997493 Msa1263740:CDS 45.0%
ATCCTACTTGAACGCCTAAC+CGG + chr8_2:66997491-66997510 None:intergenic 45.0%
! TGCCACTTCTCCTGTATAAG+CGG - chr8_2:66997520-66997539 Msa1263740:CDS 45.0%
AACCGCTTATACAGGAGAAG+TGG + chr8_2:66997525-66997544 None:intergenic 45.0%
CCAGCAAAAACCGCTTATAC+AGG + chr8_2:66997533-66997552 None:intergenic 45.0%
! CCTGTATAAGCGGTTTTTGC+TGG - chr8_2:66997530-66997549 Msa1263740:CDS 45.0%
TGCAAAGTTATGCGCAGGTT+AGG + chr8_2:66997569-66997588 None:intergenic 45.0%
AGGTATGCAAAGTTATGCGC+AGG + chr8_2:66997574-66997593 None:intergenic 45.0%
GGGGATTTGTCGTTGTTGAG+AGG + chr8_2:66994759-66994778 None:intergenic 50.0%
CCCATGCGAAGAAGTTTCTC+AGG - chr8_2:66994831-66994850 Msa1263740:CDS 50.0%
! TCTAGGGTTAGCGGCAATGA+GGG + chr8_2:66994877-66994896 None:intergenic 50.0%
! ATCTAGGGTTAGCGGCAATG+AGG + chr8_2:66994878-66994897 None:intergenic 50.0%
CAGACTCACAACTCGGAAAG+AGG + chr8_2:66995341-66995360 None:intergenic 50.0%
ATCCCAGAAGGAATCATCGG+AGG - chr8_2:66995800-66995819 Msa1263740:CDS 50.0%
CATCCTCCGATGATTCCTTC+TGG + chr8_2:66995806-66995825 None:intergenic 50.0%
TCTGGCAAGAGAGTCCTAAC+AGG + chr8_2:66995882-66995901 None:intergenic 50.0%
CAGAGTCCTATCTTTGGTCG+CGG - chr8_2:66996278-66996297 Msa1263740:CDS 50.0%
CGTTGCCTCAGAGATTTCGA+TGG - chr8_2:66996346-66996365 Msa1263740:CDS 50.0%
CAGAAGGAGACCAAACACCA+AGG - chr8_2:66996687-66996706 Msa1263740:CDS 50.0%
!! GATCATCAGCCCTTGGTGTT+TGG + chr8_2:66996700-66996719 None:intergenic 50.0%
CAGCTGATATTCCCACTGCT+TGG + chr8_2:66996892-66996911 None:intergenic 50.0%
!! CTTGCTGCTTTGTGCAGGTA+CGG - chr8_2:66996985-66997004 Msa1263740:CDS 50.0%
CCCCAGATAAGCCATCTATG+AGG - chr8_2:66997119-66997138 Msa1263740:CDS 50.0%
TGTGCCTGTAGAAATGGACG+TGG - chr8_2:66997144-66997163 Msa1263740:CDS 50.0%
CCAACCACGTCCATTTCTAC+AGG + chr8_2:66997151-66997170 None:intergenic 50.0%
CCTGTAGAAATGGACGTGGT+TGG - chr8_2:66997148-66997167 Msa1263740:CDS 50.0%
!! AAAAGCGCCGGAATTACCAC+AGG - chr8_2:66997257-66997276 Msa1263740:intron 50.0%
TTACCACAGGAGAGAGTCGT+TGG - chr8_2:66997270-66997289 Msa1263740:intron 50.0%
GCCTCTTCTGACTACTCCAT+GGG - chr8_2:66997292-66997311 Msa1263740:intron 50.0%
ACCCATGGAGTAGTCAGAAG+AGG + chr8_2:66997296-66997315 None:intergenic 50.0%
TCCATGGGTTCACCATCCTA+TGG - chr8_2:66997307-66997326 Msa1263740:intron 50.0%
TCCATAGGATGGTGAACCCA+TGG + chr8_2:66997311-66997330 None:intergenic 50.0%
ATGCGCAGGTTAGGTGATGT+AGG + chr8_2:66997560-66997579 None:intergenic 50.0%
ACTCCCGCCAATAGTCCTTC+AGG - chr8_2:66994912-66994931 Msa1263740:intron 55.0%
GCTGGCGATCTAACCTTTGC+CGG + chr8_2:66995108-66995127 None:intergenic 55.0%
CGGTGACTCAGCCATCTTGA+AGG + chr8_2:66995181-66995200 None:intergenic 55.0%
AGAAACTGGAGGAGTAGCCG+CGG + chr8_2:66995583-66995602 None:intergenic 55.0%
AGGGTCATAAGGTGGCACAG+AGG + chr8_2:66995646-66995665 None:intergenic 55.0%
GGAATTGTGGCCTAGGGGAT+AGG + chr8_2:66995680-66995699 None:intergenic 55.0%
TCCAGGGTCTCATGCTGTGT+TGG - chr8_2:66996016-66996035 Msa1263740:CDS 55.0%
TCCAACACAGCATGAGACCC+TGG + chr8_2:66996020-66996039 None:intergenic 55.0%
!! AGAGTCTGAGGAAGCACTCG+CGG - chr8_2:66996604-66996623 Msa1263740:CDS 55.0%
CGCGGGCCAATCTACTACTT+TGG - chr8_2:66996622-66996641 Msa1263740:CDS 55.0%
ACCAGAGCAGGCTTTGCAAC+TGG - chr8_2:66996649-66996668 Msa1263740:CDS 55.0%
ACCAGTTGCAAAGCCTGCTC+TGG + chr8_2:66996653-66996672 None:intergenic 55.0%
ACACACGGATGACCAAGCAG+TGG - chr8_2:66996877-66996896 Msa1263740:CDS 55.0%
CACACGGATGACCAAGCAGT+GGG - chr8_2:66996878-66996897 Msa1263740:CDS 55.0%
! CCAGCGTAGAGAAAAAGCGC+CGG - chr8_2:66997245-66997264 Msa1263740:CDS 55.0%
GGCCTCTTCTGACTACTCCA+TGG - chr8_2:66997291-66997310 Msa1263740:intron 55.0%
TTTATAGGGACGCGGCGAAG+AGG - chr8_2:66997454-66997473 Msa1263740:CDS 55.0%
CTCCGGTTAGGCGTTCAAGT+AGG - chr8_2:66997486-66997505 Msa1263740:CDS 55.0%
! GGGTTAGCGGCAATGAGGGA+AGG + chr8_2:66994873-66994892 None:intergenic 60.0%
TAGGCTCGTTCCTCTCCGCA+AGG + chr8_2:66995215-66995234 None:intergenic 60.0%
!! GAGTCTGAGGAAGCACTCGC+GGG - chr8_2:66996605-66996624 Msa1263740:CDS 60.0%
!!! CCGGCGCTTTTTCTCTACGC+TGG + chr8_2:66997248-66997267 None:intergenic 60.0%
AGGCCAACGACTCTCTCCTG+TGG + chr8_2:66997276-66997295 None:intergenic 60.0%
ACTGGAGGAGTAGCCGCGGC+TGG + chr8_2:66995579-66995598 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 66994593 66997726 66994593 ID=Msa1263740;Name=Msa1263740
chr8_2 mRNA 66994593 66997726 66994593 ID=Msa1263740-mRNA-1;Parent=Msa1263740;Name=Msa1263740-mRNA-1;_AED=0.00;_eAED=0.00;_QI=160|1|1|1|1|1|3|188|857
chr8_2 exon 66994593 66994858 66994593 ID=Msa1263740-mRNA-1:exon:21965;Parent=Msa1263740-mRNA-1
chr8_2 exon 66994959 66997273 66994959 ID=Msa1263740-mRNA-1:exon:21964;Parent=Msa1263740-mRNA-1
chr8_2 exon 66997386 66997726 66997386 ID=Msa1263740-mRNA-1:exon:21963;Parent=Msa1263740-mRNA-1
chr8_2 five_prime_UTR 66997567 66997726 66997567 ID=Msa1263740-mRNA-1:five_prime_utr;Parent=Msa1263740-mRNA-1
chr8_2 CDS 66997386 66997566 66997386 ID=Msa1263740-mRNA-1:cds;Parent=Msa1263740-mRNA-1
chr8_2 CDS 66994959 66997273 66994959 ID=Msa1263740-mRNA-1:cds;Parent=Msa1263740-mRNA-1
chr8_2 CDS 66994781 66994858 66994781 ID=Msa1263740-mRNA-1:cds;Parent=Msa1263740-mRNA-1
chr8_2 three_prime_UTR 66994593 66994780 66994593 ID=Msa1263740-mRNA-1:three_prime_utr;Parent=Msa1263740-mRNA-1
Gene Sequence

>Msa1263740

ATGCCTCTCAACAACGACAAATCCCCTCCAGTTTCAAATTCATCAAACCCTAATCCAAGAAATTCAGAAACCATTAACCCCATGCGAAGAAGTTTCTCAGGAAATCCATTCTCTAAACCTTCCCTCATTGCCGCTAACCCTAGATCTAGTTTCTCTCACACTCCCGCCAATAGTCCTTCAGATTTTTCAAGAAAAAGCTTTGCTGATGACAAAGAAAACACAAAAGATCAGTTTATGAAACCGGCAAAGGTTAGATCGCCAGCTGCAACATCGAAATCAACGAAGAATTTCATGTCACCGACGATCTCTGCTTCCTTCAAGATGGCTGAGTCACCGAGAAAGAAAATCCTTGCGGAGAGGAACGAGCCTACTCCTTCTTCCGACAACAAAATTCATGTTCGGAAGGTAACTTTTTCTGATCCTTTAGAACAGAAAAGGGTTGATACTGGTTCATTAGATGGGAATAGTAGAGTCCTCTTTCCGAGTTGTGAGTCTGAAGATTTGAGTGATGAAAATTTGTCTGAGTCCAATGTTGTTCCTATGGATGATTTGTCGTATAATGCTATGCGTATGAATGTTCCTATGATTCTAAACAATGATTCAGATTTTTCATTTGAAACTGTGCACACTGAACCCTCATTTCAAAATGTTCCTTTGATTAGAAACAATGATTCAGATTTTGTTAACCTTGACCCTACTTTTAAGCTTAGTCCAGCCGCGGCTACTCCTCCAGTTTCTTACACTGCTAATGCCGTAGACCCTCTTGTTGATGCTGATTCCTCTGTGCCACCTTATGACCCTAAAACAAATTACCTATCCCCTAGGCCACAATTCCTTCATTACAAACCAAAGCCGCTAATGGAATTAGAGGACAGTTTCATTATGTCAGGAAACTTTTCAGATACAGATGTTACCGAGGATACTCAGTCTGATGAATCCCAGAAGGAATCATCGGAGGATGTTTCTTCTGATGAAACTGTGAAGCAGGAAGATGATCAAATTTCTGAACAAAGTCCTGTTAGGACTCTCTTGCCAGAGAAAACAGTTGAAGCAAAGGAGCTGCAAAAACCACGCTTTTCTTTGAGATCGAAGGCTGCTGTTCTAATTTTGCTTCTTTCAATTGCTTTTGTATCAATTTCAATCACAAATTCTCCAGGGTCTCATGCTGTGTTGGAAGACTTTTATGAGGCTTATGAGTCTTCTGAACTTTCGGAGTTTGCAAAGGCTAACTTTGATCAATTCTCCCAGTTTGCAAAAGCGAATTTTGCAGGTTTCGTTCGGAATTCGCATATTTGGTATACTAAGTCGCTGTCTTCCATCTCTGAGTTGATTTCAGATGTTAGAGGAGTGCGTAATTTGTCCCAGTTGCAGTACTTTAACTTGACTGTGCTGCACGACTATAGTGCAGTTAATCAGAGTCCTATCTTTGGTCGCGGTGAAAATAAAATAGGCGACACTCGCCCTCCTGTTCAAGAAACACACGTTGCCTCAGAGATTTCGATGGATGAGTATTTTGGTGATATTTTAGCAGAGCATTATGAAGTATATGAAGAACAACTTCAGCATGATATGGGGATGAACACTGGATTTGAAAATGCATTGGATGCTCAAGAATCTGAGGAAGTGCACAATGGACAACCTGCTACTTATATAGAATCAGAAGAGCAGGCTGAACATGAACATTTAGATGCAAAGTTGGAAGAAGAAATTGATGCTAGCTTTGAAGTTGAAGATGCTTTAGAGTCTGAGGAAGCACTCGCGGGCCAATCTACTACTTTGGTAGAACCAGAGCAGGCTTTGCAACTGGTTGAATCAGTATACTCAGAAGGAGACCAAACACCAAGGGCTGATGATCATGAAAATATGCCAAGTTCAAATTCGGAAATTCAAAATGAAGTCTGTGGTGAAGGTAATGTAGATACAAAGCTGGAACAAGAAAATGATGTTAAATTAATTGGCAAAGAAAGTGATGCTGATCTCAAGCATTCACCAGTTTCAGAAGTTGCTGAGATACACACGGATGACCAAGCAGTGGGAATATCAGCTGACACAGATGCTGCAATTAGAGGGAATGAGCAGCTATTAGAAGCAACTCACATTCCTCAAAACATTGTGCTATACTTGCTGCTTTGTGCAGGTACGGTTTTTATTGCAGGTGCAACTTTTAACTGGTCAAGGAAAGTTAAAAGCAGAAGCAAAAAGTTTACTAGCTCTGTGGAGAAGCCTAAGATTGGATCTGAGGACAAGAAGATTTCCCCAGATAAGCCATCTATGAGGAATGTGCCTGTAGAAATGGACGTGGTTGGAGAATCGTGCCCTTCAGAAATGAGCAGCTTTGAGAAGAGCTCATCTAACAGAGTGAATCATTTGAGTGAAGCTACCAGCGTAGAGAAAAAGCGCCGGAATTACCACAGGAGAGAGTCGTTGGCCTCTTCTGACTACTCCATGGGTTCACCATCCTATGGAAGTCTAACAATGTATGAGAAAATTCCAAAGGGACGCGGCGAAGAGGAGATAGTTACTCCGGTTAGGCGTTCAAGTAGGATTAGGAGCATTGCCACTTCTCCTGTATAA

Protein sequence

>Msa1263740

MPLNNDKSPPVSNSSNPNPRNSETINPMRRSFSGNPFSKPSLIAANPRSSFSHTPANSPSDFSRKSFADDKENTKDQFMKPAKVRSPAATSKSTKNFMSPTISASFKMAESPRKKILAERNEPTPSSDNKIHVRKVTFSDPLEQKRVDTGSLDGNSRVLFPSCESEDLSDENLSESNVVPMDDLSYNAMRMNVPMILNNDSDFSFETVHTEPSFQNVPLIRNNDSDFVNLDPTFKLSPAAATPPVSYTANAVDPLVDADSSVPPYDPKTNYLSPRPQFLHYKPKPLMELEDSFIMSGNFSDTDVTEDTQSDESQKESSEDVSSDETVKQEDDQISEQSPVRTLLPEKTVEAKELQKPRFSLRSKAAVLILLLSIAFVSISITNSPGSHAVLEDFYEAYESSELSEFAKANFDQFSQFAKANFAGFVRNSHIWYTKSLSSISELISDVRGVRNLSQLQYFNLTVLHDYSAVNQSPIFGRGENKIGDTRPPVQETHVASEISMDEYFGDILAEHYEVYEEQLQHDMGMNTGFENALDAQESEEVHNGQPATYIESEEQAEHEHLDAKLEEEIDASFEVEDALESEEALAGQSTTLVEPEQALQLVESVYSEGDQTPRADDHENMPSSNSEIQNEVCGEGNVDTKLEQENDVKLIGKESDADLKHSPVSEVAEIHTDDQAVGISADTDAAIRGNEQLLEATHIPQNIVLYLLLCAGTVFIAGATFNWSRKVKSRSKKFTSSVEKPKIGSEDKKISPDKPSMRNVPVEMDVVGESCPSEMSSFEKSSSNRVNHLSEATSVEKKRRNYHRRESLASSDYSMGSPSYGSLTMYEKIPKGRGEEEIVTPVRRSSRIRSIATSPV*