Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0398790 | XP_003598991.1 | 92.484 | 306 | 14 | 1 | 1 | 306 | 1 | 297 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0398790 | sp|O82796|SERC_ARATH | 66.230 | 305 | 92 | 3 | 1 | 305 | 1 | 294 | 8.94e-136 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0398790 | G7IZA6 | 92.484 | 306 | 14 | 1 | 1 | 306 | 1 | 297 | 0.0 | 580 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0398790 | 0.836156 | 1.103960e-56 | -8.615850e-47 |
| Msa0017510 | Msa0398790 | 0.803824 | 2.899290e-49 | -8.615850e-47 |
| Msa0157290 | Msa0398790 | 0.804362 | 2.239973e-49 | -8.615850e-47 |
| Msa0220740 | Msa0398790 | 0.840050 | 1.098281e-57 | -8.615850e-47 |
| Msa0388960 | Msa0398790 | 0.808808 | 2.581711e-50 | -8.615850e-47 |
| Msa0395770 | Msa0398790 | -0.800445 | 1.436673e-48 | -8.615850e-47 |
| Msa0398790 | Msa0545210 | 0.818716 | 1.695695e-52 | -8.615850e-47 |
| Msa0398790 | Msa0564390 | 0.804816 | 1.801318e-49 | -8.615850e-47 |
| Msa0398790 | Msa0600700 | 0.802373 | 5.785187e-49 | -8.615850e-47 |
| Msa0398790 | Msa0679290 | -0.804415 | 2.183868e-49 | -8.615850e-47 |
| Msa0398790 | Msa0875290 | 0.810200 | 1.297336e-50 | -8.615850e-47 |
| Msa0398790 | Msa0880140 | 0.806232 | 9.091492e-50 | -8.615850e-47 |
| Msa0398790 | Msa0892080 | 0.817374 | 3.409085e-52 | -8.615850e-47 |
| Msa0398790 | Msa0934890 | 0.809457 | 1.874567e-50 | -8.615850e-47 |
| Msa0398790 | Msa0963190 | 0.803411 | 3.531669e-49 | -8.615850e-47 |
| Msa0398790 | Msa0967580 | 0.830496 | 2.842664e-55 | -8.615850e-47 |
| Msa0398790 | Msa1002000 | 0.800794 | 1.219581e-48 | -8.615850e-47 |
| Msa0398790 | Msa1045200 | 0.815595 | 8.528867e-52 | -8.615850e-47 |
| Msa0398790 | Msa1121490 | 0.815395 | 9.452390e-52 | -8.615850e-47 |
| Msa0398790 | Msa1169000 | 0.810177 | 1.312238e-50 | -8.615850e-47 |
| Msa0398790 | Msa1196960 | 0.807682 | 4.485765e-50 | -8.615850e-47 |
| Msa0398790 | Msa1284680 | 0.805144 | 1.538308e-49 | -8.615850e-47 |
| Msa0398790 | Msa1302830 | 0.802604 | 5.185162e-49 | -8.615850e-47 |
| Msa0398790 | Msa1313150 | 0.805264 | 1.451912e-49 | -8.615850e-47 |
| Msa0398790 | Msa1353460 | 0.800400 | 1.466884e-48 | -8.615850e-47 |
| Msa0398790 | Msa1353470 | 0.812794 | 3.543400e-51 | -8.615850e-47 |
| Msa0398790 | Msa1453320 | 0.816324 | 5.863441e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0398790 | MtrunA17_Chr3g0086841 | 92.484 | 306 | 14 | 1 | 1 | 306 | 1 | 297 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0398790 | AT1G18640.2 | 66.230 | 305 | 92 | 3 | 1 | 305 | 1 | 294 | 9.09e-137 | 389 |
| Msa0398790 | AT1G18640.3 | 65.975 | 241 | 80 | 2 | 1 | 241 | 1 | 239 | 1.19e-103 | 304 |
Find 90 sgRNAs with CRISPR-Local
Find 428 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAGCTCTGGACAGTTTC+TGG | 0.064331 | 3_2:+20794922 | Msa0398790:CDS |
| TGCCATTAGCCTTTAGTTTC+TGG | 0.105326 | 3_2:-20793844 | None:intergenic |
| GTTCTCAAAATGATCAATTT+TGG | 0.125654 | 3_2:-20790777 | None:intergenic |
| AAATTCATCCGCGTGTTATT+AGG | 0.184992 | 3_2:+20796871 | Msa0398790:three_prime_UTR |
| CAGATTTATTCTTCCATTAT+TGG | 0.218079 | 3_2:+20796947 | Msa0398790:three_prime_UTR |
| AGATTTATTCTTCCATTATT+GGG | 0.224008 | 3_2:+20796948 | Msa0398790:three_prime_UTR |
| TTGATAATGGATAGAAATTC+TGG | 0.224313 | 3_2:+20791917 | Msa0398790:intron |
| TTCACTGCGATGCGGGAAAA+TGG | 0.267541 | 3_2:-20797090 | None:intergenic |
| ATCAGAACCAAATCTCAAAA+AGG | 0.281473 | 3_2:+20790667 | Msa0398790:CDS |
| GGTACGTTTGGATTTCAAAT+TGG | 0.283743 | 3_2:+20790689 | Msa0398790:CDS |
| TTGGTGTATGTTTGGGAAAA+TGG | 0.292936 | 3_2:-20797181 | None:intergenic |
| TCAAGACCTTATAAATTCAT+TGG | 0.322272 | 3_2:+20796781 | Msa0398790:CDS |
| GTTACCCCAATGAATTTATA+AGG | 0.326728 | 3_2:-20796787 | None:intergenic |
| GGAAGCTCTGGACAGTTTCT+GGG | 0.341736 | 3_2:+20794923 | Msa0398790:CDS |
| CAAGACCTTATAAATTCATT+GGG | 0.350346 | 3_2:+20796782 | Msa0398790:CDS |
| ATGGAAGCTTTGATCAGTTA+TGG | 0.352182 | 3_2:+20790587 | Msa0398790:CDS |
| AATTCATCCGCGTGTTATTA+GGG | 0.363617 | 3_2:+20796872 | Msa0398790:three_prime_UTR |
| GTAAAGCCATTGACACGAAC+TGG | 0.374183 | 3_2:-20790617 | None:intergenic |
| TGGAAGCTTTGATCAGTTAT+GGG | 0.406259 | 3_2:+20790588 | Msa0398790:CDS |
| AAGCCTGTCGCGTCAATACT+CGG | 0.417094 | 3_2:+20794860 | Msa0398790:intron |
| TGTTGTTGGTTGGTTGGTTA+AGG | 0.417941 | 3_2:-20790472 | None:intergenic |
| AAGCATGTATATCTGATCTC+AGG | 0.418787 | 3_2:+20793866 | Msa0398790:CDS |
| GCAGCCAATGCTTCCTCAAA+AGG | 0.433886 | 3_2:-20792170 | None:intergenic |
| AAGAAAAGAAACGTTGTTGT+TGG | 0.442430 | 3_2:-20790486 | None:intergenic |
| TTGAGGAAGCATTGGCTGCT+AGG | 0.443908 | 3_2:+20792174 | Msa0398790:CDS |
| TGGATTAACTCTTCAATGCC+AGG | 0.447873 | 3_2:-20793824 | None:intergenic |
| ATCAACCCAGTTCGTGTCAA+TGG | 0.453233 | 3_2:+20790611 | Msa0398790:CDS |
| CACATTTAGGCTCGTAGACC+AGG | 0.464103 | 3_2:+20796674 | Msa0398790:intron |
| ACGAAAATGAGTATACTTCA+AGG | 0.464105 | 3_2:+20794951 | Msa0398790:CDS |
| GTTAAATTTCACTGCGATGC+GGG | 0.468903 | 3_2:-20797097 | None:intergenic |
| TCCATACATTGATCATTTGA+CGG | 0.469669 | 3_2:-20793895 | None:intergenic |
| TTAATATTCAGGCTTTCCCC+TGG | 0.477652 | 3_2:+20793806 | Msa0398790:intron |
| GACATGTTCATTTGCTATGC+TGG | 0.485489 | 3_2:+20796704 | Msa0398790:CDS |
| ATCCAGAAACTAAAGGCTAA+TGG | 0.487422 | 3_2:+20793842 | Msa0398790:CDS |
| ATTATGGCTGCTGCTACTGT+TGG | 0.489665 | 3_2:+20790749 | Msa0398790:CDS |
| GGATAGAAATTCTGGAGCTA+TGG | 0.500000 | 3_2:+20791925 | Msa0398790:intron |
| GATTTATTCTTCCATTATTG+GGG | 0.500534 | 3_2:+20796949 | Msa0398790:three_prime_UTR |
| AGGTACTGATACGAGATTGT+TGG | 0.505587 | 3_2:-20790452 | None:intergenic |
| CTTGATTTGTTCGACTGCAG+TGG | 0.507337 | 3_2:-20794987 | None:intergenic |
| AGATTTGGTTCTGATTCAAA+CGG | 0.510847 | 3_2:-20790659 | None:intergenic |
| TACAAAGCATTAACTATGAT+CGG | 0.515849 | 3_2:+20795096 | Msa0398790:CDS |
| AAACGTTGTTGTTGGTTGGT+TGG | 0.521352 | 3_2:-20790478 | None:intergenic |
| ATTCTGGAGCTATGGAAGAA+TGG | 0.524311 | 3_2:+20791933 | Msa0398790:CDS |
| AAAGAAACGTTGTTGTTGGT+TGG | 0.526829 | 3_2:-20790482 | None:intergenic |
| AGAGTTAATCCAGAAACTAA+AGG | 0.527183 | 3_2:+20793835 | Msa0398790:CDS |
| CAGGAAAAGCTGTTGCAGAA+TGG | 0.530124 | 3_2:+20792033 | Msa0398790:CDS |
| CTGTTGCTGCAAAAGCTGAT+TGG | 0.533885 | 3_2:+20796744 | Msa0398790:CDS |
| ATTGTTGGAGGTTGGTGTCA+TGG | 0.536720 | 3_2:-20790437 | None:intergenic |
| GCTCGTCAATTCCTTCATCT+AGG | 0.541588 | 3_2:-20791992 | None:intergenic |
| AGCATGTATATCTGATCTCA+GGG | 0.541970 | 3_2:+20793867 | Msa0398790:CDS |
| GGATTAACTCTTCAATGCCA+GGG | 0.542136 | 3_2:-20793823 | None:intergenic |
| ATTCTCAAGTTGAGACATAG+AGG | 0.545564 | 3_2:-20792213 | None:intergenic |
| AGCCTGTCGCGTCAATACTC+GGG | 0.548310 | 3_2:+20794861 | Msa0398790:intron |
| AGCACTGTGTGCCTAGATGA+AGG | 0.548965 | 3_2:+20791981 | Msa0398790:CDS |
| TACTGATACGAGATTGTTGG+AGG | 0.550982 | 3_2:-20790449 | None:intergenic |
| AAACATACAAACGCAGTGGA+AGG | 0.552155 | 3_2:-20796996 | None:intergenic |
| GTAGCAGCAGCCATAATCAA+AGG | 0.552287 | 3_2:-20790743 | None:intergenic |
| AATTATGCAAAACCTTTGGA+AGG | 0.560585 | 3_2:-20790806 | None:intergenic |
| AAAATATCTCGGATATCTTG+AGG | 0.567132 | 3_2:+20795146 | Msa0398790:CDS |
| ATCCCGAGTATTGACGCGAC+AGG | 0.570432 | 3_2:-20794863 | None:intergenic |
| ATGAACATGTCGGCACCACC+TGG | 0.573609 | 3_2:-20796692 | None:intergenic |
| TTTGAGGTAAGAAAATATCT+CGG | 0.574760 | 3_2:+20795135 | Msa0398790:CDS |
| TAAAGCCATTGACACGAACT+GGG | 0.575385 | 3_2:-20790616 | None:intergenic |
| CGGACTCAATCATACCTTGG+TGG | 0.576676 | 3_2:-20792251 | None:intergenic |
| GAGAACATCGTTCCTTCCAA+AGG | 0.577538 | 3_2:+20790794 | Msa0398790:CDS |
| ATTAAAACCGTGTGATACAT+CGG | 0.580619 | 3_2:-20797042 | None:intergenic |
| GCATTAACTATGATCGGAGA+TGG | 0.584389 | 3_2:+20795102 | Msa0398790:CDS |
| ATGTTGTTGTGTTATAGTTG+TGG | 0.587402 | 3_2:-20790522 | None:intergenic |
| CATAGAAGTGAGGAAGCAGA+TGG | 0.589192 | 3_2:+20796843 | Msa0398790:three_prime_UTR |
| TTCTTCTGCAAAGGCCACCA+AGG | 0.591963 | 3_2:+20792237 | Msa0398790:CDS |
| GTTTGGATTTCAAATTGGAG+TGG | 0.598685 | 3_2:+20790694 | Msa0398790:CDS |
| TGCAGTCGAACAAATCAAGA+AGG | 0.599148 | 3_2:+20794991 | Msa0398790:CDS |
| AATGAGTATACTTCAAGGAG+TGG | 0.601202 | 3_2:+20794956 | Msa0398790:CDS |
| GAGTATACTTCAAGGAGTGG+AGG | 0.606111 | 3_2:+20794959 | Msa0398790:CDS |
| TTCTCAAGTTGAGACATAGA+GGG | 0.613578 | 3_2:-20792212 | None:intergenic |
| GATACGAGATTGTTGGAGGT+TGG | 0.614771 | 3_2:-20790445 | None:intergenic |
| GGTTAAATTTCACTGCGATG+CGG | 0.617205 | 3_2:-20797098 | None:intergenic |
| AACATACAAACGCAGTGGAA+GGG | 0.621085 | 3_2:-20796995 | None:intergenic |
| TGATGCAGTGTGCTTTGATG+TGG | 0.622176 | 3_2:+20791956 | Msa0398790:CDS |
| CTGTTGCAGAATGGACTGCA+AGG | 0.622394 | 3_2:+20792042 | Msa0398790:CDS |
| ATTTATTCTTCCATTATTGG+GGG | 0.629822 | 3_2:+20796950 | Msa0398790:three_prime_UTR |
| AAGACCTTATAAATTCATTG+GGG | 0.634548 | 3_2:+20796783 | Msa0398790:CDS |
| TACATTACCGATGTATCACA+CGG | 0.641808 | 3_2:+20797035 | Msa0398790:three_prime_UTR |
| AGCATAGCAAATGAACATGT+CGG | 0.648099 | 3_2:-20796702 | None:intergenic |
| CATGTATATCTGATCTCAGG+GGG | 0.663352 | 3_2:+20793869 | Msa0398790:CDS |
| GATTAACTCTTCAATGCCAG+GGG | 0.679834 | 3_2:-20793822 | None:intergenic |
| ACTGAAACATACAAACGCAG+TGG | 0.691718 | 3_2:-20797000 | None:intergenic |
| ATTTAGGCTCGTAGACCAGG+TGG | 0.708141 | 3_2:+20796677 | Msa0398790:intron |
| GCATGTATATCTGATCTCAG+GGG | 0.727166 | 3_2:+20793868 | Msa0398790:CDS |
| AATCATTCCCTAATAACACG+CGG | 0.731956 | 3_2:-20796879 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCACTTTTTTTTTTTTTTT+TGG | - | chr3_2:20790399-20790418 | None:intergenic | 10.0% |
| !! | AAAATAAAGTAAAAAAATAG+TGG | - | chr3_2:20790947-20790966 | None:intergenic | 10.0% |
| !! | CAAAATAAAATATAATTAGA+CGG | - | chr3_2:20791512-20791531 | None:intergenic | 10.0% |
| !! | TAAAATTCAATATATCAAAA+CGG | - | chr3_2:20791633-20791652 | None:intergenic | 10.0% |
| !! | TAAAAAAGAGAATTTAATTG+TGG | + | chr3_2:20793116-20793135 | Msa0398790:intron | 15.0% |
| !!! | AGTTGTAATGATTATTTTTT+TGG | + | chr3_2:20793922-20793941 | Msa0398790:intron | 15.0% |
| !!! | AATAAATTTTCTCTAAATCA+TGG | + | chr3_2:20794133-20794152 | Msa0398790:intron | 15.0% |
| !!! | GAATTTTAGGTAAAATTTTT+TGG | + | chr3_2:20794751-20794770 | Msa0398790:intron | 15.0% |
| !!! | TATTTGTTTTGAAATTAGAA+AGG | - | chr3_2:20795695-20795714 | None:intergenic | 15.0% |
| !! | TTAATTTCGAAAAAATAGAT+GGG | - | chr3_2:20795781-20795800 | None:intergenic | 15.0% |
| !!! | TTTAATTTCGAAAAAATAGA+TGG | - | chr3_2:20795782-20795801 | None:intergenic | 15.0% |
| !!! | ATTATTTTTGTTTTTGTAGT+AGG | + | chr3_2:20796216-20796235 | Msa0398790:intron | 15.0% |
| !! | AAAAATAGGAAAACAAAAAA+GGG | - | chr3_2:20796818-20796837 | None:intergenic | 15.0% |
| !! | AAAAAATAGGAAAACAAAAA+AGG | - | chr3_2:20796819-20796838 | None:intergenic | 15.0% |
| !!! | TGTATCCTTTTTATTATCTA+TGG | + | chr3_2:20790839-20790858 | Msa0398790:intron | 20.0% |
| !! | TAGTTCCATAGATAATAAAA+AGG | - | chr3_2:20790847-20790866 | None:intergenic | 20.0% |
| !! | ATATTCTAACATTTGTCATT+TGG | + | chr3_2:20791274-20791293 | Msa0398790:intron | 20.0% |
| !!! | TGATATATTGAATTTTACCA+TGG | + | chr3_2:20791636-20791655 | Msa0398790:intron | 20.0% |
| !!! | TACAAAGTATTGTAAAATAG+TGG | + | chr3_2:20793277-20793296 | Msa0398790:intron | 20.0% |
| !! | AAAAGCAATAAAATTAGCAA+AGG | - | chr3_2:20794088-20794107 | None:intergenic | 20.0% |
| !! | AAATTAATTTCAAACTTGCA+TGG | - | chr3_2:20794632-20794651 | None:intergenic | 20.0% |
| !! | TTGAAAGGAAAAATAAACAT+TGG | - | chr3_2:20794697-20794716 | None:intergenic | 20.0% |
| !! | ATTAAAAATTTCAGGATCAT+GGG | + | chr3_2:20795073-20795092 | Msa0398790:intron | 20.0% |
| !! | TCTACAATATTAGTAATAGT+AGG | - | chr3_2:20795240-20795259 | None:intergenic | 20.0% |
| !! | TACTATTACTAATATTGTAG+AGG | + | chr3_2:20795239-20795258 | Msa0398790:intron | 20.0% |
| !! | TAATTTCGAAAAAATAGATG+GGG | - | chr3_2:20795780-20795799 | None:intergenic | 20.0% |
| !!! | TTCTACTCAATTAATTTTCT+AGG | - | chr3_2:20796297-20796316 | None:intergenic | 20.0% |
| !! | ACTTCTATGATTCAAAAAAT+AGG | - | chr3_2:20796832-20796851 | None:intergenic | 20.0% |
| !! | AGATTTATTCTTCCATTATT+GGG | + | chr3_2:20796948-20796967 | Msa0398790:three_prime_UTR | 20.0% |
| !!! | ATTTTAAGCTTCTAAAAACA+AGG | - | chr3_2:20797122-20797141 | None:intergenic | 20.0% |
| !! | GTTCTCAAAATGATCAATTT+TGG | - | chr3_2:20790780-20790799 | None:intergenic | 25.0% |
| ! | AAAGAATTATGCAAAACCTT+TGG | - | chr3_2:20790813-20790832 | None:intergenic | 25.0% |
| ! | TTAGTGTTATATTGTAGATG+AGG | - | chr3_2:20791253-20791272 | None:intergenic | 25.0% |
| ! | CATAAAAAACTGTTATGTTG+AGG | + | chr3_2:20791431-20791450 | Msa0398790:intron | 25.0% |
| !! | GACAACAGAGTTTTTATTAA+AGG | - | chr3_2:20791473-20791492 | None:intergenic | 25.0% |
| !!! | TGATTTGTTGAATTTCATCA+TGG | + | chr3_2:20791530-20791549 | Msa0398790:intron | 25.0% |
| !!! | GATTTGTTGAATTTCATCAT+GGG | + | chr3_2:20791531-20791550 | Msa0398790:intron | 25.0% |
| !! | ATTTGTTGAATTTCATCATG+GGG | + | chr3_2:20791532-20791551 | Msa0398790:intron | 25.0% |
| !! | ATATTGAATTTTACCATGGT+AGG | + | chr3_2:20791640-20791659 | Msa0398790:intron | 25.0% |
| !!! | AAGTGTATTTTTAGTAACAG+TGG | - | chr3_2:20791749-20791768 | None:intergenic | 25.0% |
| ! | TCAGTAATTCTCAATGTTAT+TGG | + | chr3_2:20791855-20791874 | Msa0398790:intron | 25.0% |
| !!! | TTTCTGTGTTGTTTTGATAA+TGG | + | chr3_2:20791904-20791923 | Msa0398790:intron | 25.0% |
| !!! | TTGATAATGGATAGAAATTC+TGG | + | chr3_2:20791917-20791936 | Msa0398790:intron | 25.0% |
| ! | GTTAGATTGTTCAATGAAAA+AGG | + | chr3_2:20792064-20792083 | Msa0398790:intron | 25.0% |
| ! | TAATGCTATGTGTAAAAGAA+AGG | + | chr3_2:20792472-20792491 | Msa0398790:intron | 25.0% |
| ! | AATGCTATGTGTAAAAGAAA+GGG | + | chr3_2:20792473-20792492 | Msa0398790:intron | 25.0% |
| !! | TGCTTGGTTTAAGATATATT+TGG | + | chr3_2:20792980-20792999 | Msa0398790:intron | 25.0% |
| !! | GGTTTAAGATATATTTGGTT+TGG | + | chr3_2:20792985-20793004 | Msa0398790:intron | 25.0% |
| ! | AAGATATCACTTAAACATGA+AGG | - | chr3_2:20793059-20793078 | None:intergenic | 25.0% |
| ! | ACAATAAAACTGCATAATAG+CGG | + | chr3_2:20793310-20793329 | Msa0398790:intron | 25.0% |
| ! | AAGTTAGATTGCATTTACAA+GGG | - | chr3_2:20793538-20793557 | None:intergenic | 25.0% |
| !! | TAAATGCAATCTAACTTGTA+AGG | + | chr3_2:20793541-20793560 | Msa0398790:intron | 25.0% |
| ! | GGTCTAACAAAAAAATAACA+TGG | - | chr3_2:20793635-20793654 | None:intergenic | 25.0% |
| ! | TATGATTCTCCTTAATATTC+AGG | + | chr3_2:20793795-20793814 | Msa0398790:intron | 25.0% |
| !! | TGGTTTTCAAATCTTTTTAG+TGG | - | chr3_2:20794166-20794185 | None:intergenic | 25.0% |
| ! | TACAATGTGTTATCAAATAG+AGG | + | chr3_2:20794360-20794379 | Msa0398790:intron | 25.0% |
| ! | ATTGTTTCCACATTCTAAAT+TGG | - | chr3_2:20794506-20794525 | None:intergenic | 25.0% |
| ! | ACTTGTGAAAATTGTTTGAA+AGG | - | chr3_2:20794712-20794731 | None:intergenic | 25.0% |
| !! | TTCAAACAATTTTCACAAGT+TGG | + | chr3_2:20794712-20794731 | Msa0398790:intron | 25.0% |
| !! | CATGATCCTGAAATTTTTAA+TGG | - | chr3_2:20795074-20795093 | None:intergenic | 25.0% |
| ! | CATTAAAAATTTCAGGATCA+TGG | + | chr3_2:20795072-20795091 | Msa0398790:intron | 25.0% |
| !! | TACAAAGCATTAACTATGAT+CGG | + | chr3_2:20795096-20795115 | Msa0398790:CDS | 25.0% |
| !! | TTTGAGGTAAGAAAATATCT+CGG | + | chr3_2:20795135-20795154 | Msa0398790:CDS | 25.0% |
| !!! | GTTTTGAAAATTAAACTCCA+AGG | + | chr3_2:20795202-20795221 | Msa0398790:intron | 25.0% |
| !! | AAAGTATTCAAGTGTAATTC+AGG | + | chr3_2:20795800-20795819 | Msa0398790:intron | 25.0% |
| ! | AAGTATTCAAGTGTAATTCA+GGG | + | chr3_2:20795801-20795820 | Msa0398790:intron | 25.0% |
| !!! | ATGTCATTTTGACTTATCTT+AGG | + | chr3_2:20796409-20796428 | Msa0398790:intron | 25.0% |
| ! | AGTCTAATCAAAAAGTTGTT+TGG | - | chr3_2:20796503-20796522 | None:intergenic | 25.0% |
| ! | TCAAGACCTTATAAATTCAT+TGG | + | chr3_2:20796781-20796800 | Msa0398790:CDS | 25.0% |
| ! | CAAGACCTTATAAATTCATT+GGG | + | chr3_2:20796782-20796801 | Msa0398790:CDS | 25.0% |
| ! | AAGACCTTATAAATTCATTG+GGG | + | chr3_2:20796783-20796802 | Msa0398790:CDS | 25.0% |
| !!! | TTTTTTGAATCATAGAAGTG+AGG | + | chr3_2:20796833-20796852 | Msa0398790:three_prime_UTR | 25.0% |
| ! | CAGATTTATTCTTCCATTAT+TGG | + | chr3_2:20796947-20796966 | Msa0398790:three_prime_UTR | 25.0% |
| ! | GATTTATTCTTCCATTATTG+GGG | + | chr3_2:20796949-20796968 | Msa0398790:three_prime_UTR | 25.0% |
| ! | ATTTATTCTTCCATTATTGG+GGG | + | chr3_2:20796950-20796969 | Msa0398790:three_prime_UTR | 25.0% |
| AAGAAAAGAAACGTTGTTGT+TGG | - | chr3_2:20790489-20790508 | None:intergenic | 30.0% | |
| ATGTTGTTGTGTTATAGTTG+TGG | - | chr3_2:20790525-20790544 | None:intergenic | 30.0% | |
| AGTGAGAAGACAAAAAATGT+TGG | - | chr3_2:20790563-20790582 | None:intergenic | 30.0% | |
| !! | AGATTTGGTTCTGATTCAAA+CGG | - | chr3_2:20790662-20790681 | None:intergenic | 30.0% |
| ATCAGAACCAAATCTCAAAA+AGG | + | chr3_2:20790667-20790686 | Msa0398790:CDS | 30.0% | |
| TCAGAACCAAATCTCAAAAA+GGG | + | chr3_2:20790668-20790687 | Msa0398790:CDS | 30.0% | |
| ! | GAAGTTTTCTCCTTTGATTA+TGG | + | chr3_2:20790733-20790752 | Msa0398790:CDS | 30.0% |
| AATTATGCAAAACCTTTGGA+AGG | - | chr3_2:20790809-20790828 | None:intergenic | 30.0% | |
| ATATAATTGTCCGTAAGACT+TGG | + | chr3_2:20791009-20791028 | Msa0398790:intron | 30.0% | |
| ATCACTATCATGCACTAAAT+AGG | - | chr3_2:20791162-20791181 | None:intergenic | 30.0% | |
| GAAAAATATAGTGTAGACCA+GGG | + | chr3_2:20791296-20791315 | Msa0398790:intron | 30.0% | |
| TTTGTTGAATTTCATCATGG+GGG | + | chr3_2:20791533-20791552 | Msa0398790:intron | 30.0% | |
| !!! | TATTGGCTTCTATGTTTTCT+TGG | + | chr3_2:20791872-20791891 | Msa0398790:intron | 30.0% |
| !! | ATTGGCTTCTATGTTTTCTT+GGG | + | chr3_2:20791873-20791892 | Msa0398790:intron | 30.0% |
| ! | TTGAATTTTCACAGAGCAAT+GGG | + | chr3_2:20792137-20792156 | Msa0398790:intron | 30.0% |
| ! | TTGAGAATTTTCTTCTGCAA+AGG | + | chr3_2:20792228-20792247 | Msa0398790:CDS | 30.0% |
| !! | GTAATCACATTAAGTTGATC+CGG | + | chr3_2:20792361-20792380 | Msa0398790:intron | 30.0% |
| TTGTCAAATAGCTGATATAG+CGG | + | chr3_2:20792564-20792583 | Msa0398790:intron | 30.0% | |
| ! | TCTTCTAGTTGAAGACATAA+GGG | - | chr3_2:20792914-20792933 | None:intergenic | 30.0% |
| ! | TTCTTCTAGTTGAAGACATA+AGG | - | chr3_2:20792915-20792934 | None:intergenic | 30.0% |
| TGTAAAATAGTGGCTATAAC+AGG | + | chr3_2:20793287-20793306 | Msa0398790:intron | 30.0% | |
| ! | AAAATGTCGTTAGAAGTGTA+GGG | - | chr3_2:20793395-20793414 | None:intergenic | 30.0% |
| ! | TAAAATGTCGTTAGAAGTGT+AGG | - | chr3_2:20793396-20793415 | None:intergenic | 30.0% |
| AAAACCAGCCAAAACTTTAA+AGG | + | chr3_2:20793439-20793458 | Msa0398790:intron | 30.0% | |
| AAACCAGCCAAAACTTTAAA+GGG | + | chr3_2:20793440-20793459 | Msa0398790:intron | 30.0% | |
| CAAGTTAGATTGCATTTACA+AGG | - | chr3_2:20793539-20793558 | None:intergenic | 30.0% | |
| ! | TTTTTGTCTAGTCAGAGTTT+TGG | - | chr3_2:20793660-20793679 | None:intergenic | 30.0% |
| AGAAAATAAAGTAGGCAGTT+AGG | - | chr3_2:20793705-20793724 | None:intergenic | 30.0% | |
| ! | GAAAGCACAGAAAATAAAGT+AGG | - | chr3_2:20793713-20793732 | None:intergenic | 30.0% |
| AGAGTTAATCCAGAAACTAA+AGG | + | chr3_2:20793835-20793854 | Msa0398790:CDS | 30.0% | |
| TCCATACATTGATCATTTGA+CGG | - | chr3_2:20793898-20793917 | None:intergenic | 30.0% | |
| TTAGCAAAGGAAATTAAGAG+AGG | - | chr3_2:20794075-20794094 | None:intergenic | 30.0% | |
| TTGTACTAAATAGCGTATTG+TGG | - | chr3_2:20794345-20794364 | None:intergenic | 30.0% | |
| TTCCACATTCTAAATTGGAA+TGG | - | chr3_2:20794501-20794520 | None:intergenic | 30.0% | |
| TTGTACATTGCTTACCTATA+AGG | + | chr3_2:20794550-20794569 | Msa0398790:intron | 30.0% | |
| AACATAGATTTCCACCTTAT+AGG | - | chr3_2:20794567-20794586 | None:intergenic | 30.0% | |
| !! | TTTGCCAATCAACTACTTTT+TGG | + | chr3_2:20794902-20794921 | Msa0398790:CDS | 30.0% |
| ACGAAAATGAGTATACTTCA+AGG | + | chr3_2:20794951-20794970 | Msa0398790:CDS | 30.0% | |
| AGCTGACCATTAAAAATTTC+AGG | + | chr3_2:20795065-20795084 | Msa0398790:intron | 30.0% | |
| AAAATATCTCGGATATCTTG+AGG | + | chr3_2:20795146-20795165 | Msa0398790:CDS | 30.0% | |
| !! | TAGTGGATTAGAGGTTATAT+CGG | + | chr3_2:20795331-20795350 | Msa0398790:intron | 30.0% |
| TGTAAATTCCTGTACAAGTA+TGG | - | chr3_2:20795634-20795653 | None:intergenic | 30.0% | |
| AAATACTGATCACCCTTATT+TGG | + | chr3_2:20795710-20795729 | Msa0398790:intron | 30.0% | |
| ! | GCAACTTTTCTACCAAATAA+GGG | - | chr3_2:20795725-20795744 | None:intergenic | 30.0% |
| ! | AGCAACTTTTCTACCAAATA+AGG | - | chr3_2:20795726-20795745 | None:intergenic | 30.0% |
| AGTATTCAAGTGTAATTCAG+GGG | + | chr3_2:20795802-20795821 | Msa0398790:intron | 30.0% | |
| ! | GAATTTTCACGAGTATGTTA+GGG | - | chr3_2:20795875-20795894 | None:intergenic | 30.0% |
| ! | TGAATTTTCACGAGTATGTT+AGG | - | chr3_2:20795876-20795895 | None:intergenic | 30.0% |
| ATTGCATGAATACGTGAAAT+CGG | + | chr3_2:20795971-20795990 | Msa0398790:intron | 30.0% | |
| TCTCAGATCTTAAACATGAA+CGG | - | chr3_2:20796104-20796123 | None:intergenic | 30.0% | |
| GAATGCACAAATATGAAAAC+AGG | - | chr3_2:20796471-20796490 | None:intergenic | 30.0% | |
| CAAAAAGTTGTTTGGTTAGT+TGG | - | chr3_2:20796495-20796514 | None:intergenic | 30.0% | |
| ! | CAACAATTTAAGATCACTGT+CGG | - | chr3_2:20796534-20796553 | None:intergenic | 30.0% |
| TAAGAATGACACAGCAAATT+AGG | - | chr3_2:20796595-20796614 | None:intergenic | 30.0% | |
| GTTATTCAAGAAAACCTAAG+AGG | - | chr3_2:20796619-20796638 | None:intergenic | 30.0% | |
| !!! | ATGCTTTTTTCTGCACATTT+AGG | + | chr3_2:20796661-20796680 | Msa0398790:intron | 30.0% |
| GTTACCCCAATGAATTTATA+AGG | - | chr3_2:20796790-20796809 | None:intergenic | 30.0% | |
| TAAAATTACACCCCCAATAA+TGG | - | chr3_2:20796963-20796982 | None:intergenic | 30.0% | |
| ATTAAAACCGTGTGATACAT+CGG | - | chr3_2:20797045-20797064 | None:intergenic | 30.0% | |
| !! | CACGGTTTTAATAGTATGTT+TGG | + | chr3_2:20797053-20797072 | Msa0398790:three_prime_UTR | 30.0% |
| ! | AAAGAAACGTTGTTGTTGGT+TGG | - | chr3_2:20790485-20790504 | None:intergenic | 35.0% |
| GACAAAAAATGTTGGATCTG+AGG | - | chr3_2:20790555-20790574 | None:intergenic | 35.0% | |
| ! | TTTTGTCTTCTCACTGTACA+TGG | + | chr3_2:20790568-20790587 | Msa0398790:exon | 35.0% |
| ! | ATGGAAGCTTTGATCAGTTA+TGG | + | chr3_2:20790587-20790606 | Msa0398790:CDS | 35.0% |
| ! | TGGAAGCTTTGATCAGTTAT+GGG | + | chr3_2:20790588-20790607 | Msa0398790:CDS | 35.0% |
| !!! | AACGTACCCTTTTTGAGATT+TGG | - | chr3_2:20790677-20790696 | None:intergenic | 35.0% |
| ! | AATCTCAAAAAGGGTACGTT+TGG | + | chr3_2:20790677-20790696 | Msa0398790:CDS | 35.0% |
| GGTACGTTTGGATTTCAAAT+TGG | + | chr3_2:20790689-20790708 | Msa0398790:CDS | 35.0% | |
| GTTTGGATTTCAAATTGGAG+TGG | + | chr3_2:20790694-20790713 | Msa0398790:CDS | 35.0% | |
| AAATAGTGTCCACTAGAAAG+CGG | + | chr3_2:20790986-20791005 | Msa0398790:intron | 35.0% | |
| CAATTATATCCGCTTTCTAG+TGG | - | chr3_2:20790998-20791017 | None:intergenic | 35.0% | |
| ! | GTGCATGATAGTGATCAAAT+AGG | + | chr3_2:20791167-20791186 | Msa0398790:intron | 35.0% |
| TGATCAAATAGGATTACCTC+CGG | + | chr3_2:20791178-20791197 | Msa0398790:intron | 35.0% | |
| GGAAAAATATAGTGTAGACC+AGG | + | chr3_2:20791295-20791314 | Msa0398790:intron | 35.0% | |
| ! | GTTACTGCTATTTAAAACCC+TGG | - | chr3_2:20791316-20791335 | None:intergenic | 35.0% |
| TGTTGCGGTCATTGATATTA+CGG | + | chr3_2:20791347-20791366 | Msa0398790:intron | 35.0% | |
| TCATATTTCTCTACCTACCA+TGG | - | chr3_2:20791656-20791675 | None:intergenic | 35.0% | |
| TGGTAGGTAGAGAAATATGA+TGG | + | chr3_2:20791656-20791675 | Msa0398790:intron | 35.0% | |
| ! | GTTGAATTTTCACAGAGCAA+TGG | + | chr3_2:20792136-20792155 | Msa0398790:intron | 35.0% |
| !! | TTCTCAAGTTGAGACATAGA+GGG | - | chr3_2:20792215-20792234 | None:intergenic | 35.0% |
| !! | ATTCTCAAGTTGAGACATAG+AGG | - | chr3_2:20792216-20792235 | None:intergenic | 35.0% |
| TCAATGTAGCTTCATGACTT+AGG | + | chr3_2:20792314-20792333 | Msa0398790:intron | 35.0% | |
| !! | GGAGTATTTCACTTGCTATT+TGG | + | chr3_2:20792335-20792354 | Msa0398790:intron | 35.0% |
| ! | CTTGCCTTAGACTTTTTACT+TGG | + | chr3_2:20792412-20792431 | Msa0398790:intron | 35.0% |
| TCCACCAAGTAAAAAGTCTA+AGG | - | chr3_2:20792419-20792438 | None:intergenic | 35.0% | |
| ACTATAGTGCTATAGCATTG+TGG | + | chr3_2:20792588-20792607 | Msa0398790:intron | 35.0% | |
| GATATAGAACTCTAGTGTAG+TGG | + | chr3_2:20792672-20792691 | Msa0398790:intron | 35.0% | |
| TCACAGTTCGCAGAAAATAA+TGG | - | chr3_2:20792709-20792728 | None:intergenic | 35.0% | |
| CAATGATGAGTACATCATAC+AGG | - | chr3_2:20792796-20792815 | None:intergenic | 35.0% | |
| ATGAATCCAGATAAAGTGCA+GGG | + | chr3_2:20792826-20792845 | Msa0398790:intron | 35.0% | |
| TAAGTTACGTTTGGAGAAAC+CGG | - | chr3_2:20792888-20792907 | None:intergenic | 35.0% | |
| ACCAAATAAGCATTAGGAAG+GGG | - | chr3_2:20792953-20792972 | None:intergenic | 35.0% | |
| GACCAAATAAGCATTAGGAA+GGG | - | chr3_2:20792954-20792973 | None:intergenic | 35.0% | |
| TGACCAAATAAGCATTAGGA+AGG | - | chr3_2:20792955-20792974 | None:intergenic | 35.0% | |
| CAAGTGACCAAATAAGCATT+AGG | - | chr3_2:20792959-20792978 | None:intergenic | 35.0% | |
| TTATTTGGTCACTTGATGCT+TGG | + | chr3_2:20792964-20792983 | Msa0398790:intron | 35.0% | |
| ACAATGCAGGATTTCTTCTT+AGG | - | chr3_2:20793014-20793033 | None:intergenic | 35.0% | |
| ! | AGGAGTGTGATTTATAGCTT+TGG | - | chr3_2:20793039-20793058 | None:intergenic | 35.0% |
| ATGTTCCACAATATGCTACT+TGG | + | chr3_2:20793254-20793273 | Msa0398790:intron | 35.0% | |
| TTGTACCAAGTAGCATATTG+TGG | - | chr3_2:20793262-20793281 | None:intergenic | 35.0% | |
| TCTCTCAGTGTTAAGAATCA+TGG | - | chr3_2:20793365-20793384 | None:intergenic | 35.0% | |
| ! | AACCAGCCAAAACTTTAAAG+GGG | + | chr3_2:20793441-20793460 | Msa0398790:intron | 35.0% |
| !!! | AAGACACCCCTTTAAAGTTT+TGG | - | chr3_2:20793450-20793469 | None:intergenic | 35.0% |
| TGCAAGTCTATAGTACTAGT+AGG | - | chr3_2:20793570-20793589 | None:intergenic | 35.0% | |
| ATCCAGAAACTAAAGGCTAA+TGG | + | chr3_2:20793842-20793861 | Msa0398790:CDS | 35.0% | |
| AAGCATGTATATCTGATCTC+AGG | + | chr3_2:20793866-20793885 | Msa0398790:CDS | 35.0% | |
| AGCATGTATATCTGATCTCA+GGG | + | chr3_2:20793867-20793886 | Msa0398790:CDS | 35.0% | |
| TCCGTCAAATGATCAATGTA+TGG | + | chr3_2:20793894-20793913 | Msa0398790:intron | 35.0% | |
| TTTAGTGATCGAATTCAGAG+AGG | + | chr3_2:20794035-20794054 | Msa0398790:intron | 35.0% | |
| TGACAGATTCTATATATGCC+AGG | - | chr3_2:20794200-20794219 | None:intergenic | 35.0% | |
| TGTTATCAATTGTAGATCGC+GGG | - | chr3_2:20794440-20794459 | None:intergenic | 35.0% | |
| GTGTTATCAATTGTAGATCG+CGG | - | chr3_2:20794441-20794460 | None:intergenic | 35.0% | |
| ! | CTCCATTCCAATTTAGAATG+TGG | + | chr3_2:20794496-20794515 | Msa0398790:intron | 35.0% |
| TACATTGCTTACCTATAAGG+TGG | + | chr3_2:20794553-20794572 | Msa0398790:intron | 35.0% | |
| CGAAACCATGAACATAAGTT+AGG | + | chr3_2:20794653-20794672 | Msa0398790:intron | 35.0% | |
| ! | TTTCACAAGTTGGATTGCTA+CGG | + | chr3_2:20794722-20794741 | Msa0398790:intron | 35.0% |
| ! | GCTACGGCATTAAGAATTTT+AGG | + | chr3_2:20794738-20794757 | Msa0398790:intron | 35.0% |
| TTGGCAAAAATGTTCTCTTG+TGG | - | chr3_2:20794890-20794909 | None:intergenic | 35.0% | |
| GCTTCCAAAAAGTAGTTGAT+TGG | - | chr3_2:20794909-20794928 | None:intergenic | 35.0% | |
| AATGAGTATACTTCAAGGAG+TGG | + | chr3_2:20794956-20794975 | Msa0398790:CDS | 35.0% | |
| CACCTCCTATATAGTCATAT+AGG | + | chr3_2:20795357-20795376 | Msa0398790:intron | 35.0% | |
| AGCCTATATGACTATATAGG+AGG | - | chr3_2:20795362-20795381 | None:intergenic | 35.0% | |
| CCAAGCCTATATGACTATAT+AGG | - | chr3_2:20795365-20795384 | None:intergenic | 35.0% | |
| CCTATATAGTCATATAGGCT+TGG | + | chr3_2:20795362-20795381 | Msa0398790:intron | 35.0% | |
| TAATACCTGAGCATGAGATA+CGG | - | chr3_2:20795416-20795435 | None:intergenic | 35.0% | |
| AATCAAGACTCAAATGTTGC+GGG | - | chr3_2:20795454-20795473 | None:intergenic | 35.0% | |
| CAATCAAGACTCAAATGTTG+CGG | - | chr3_2:20795455-20795474 | None:intergenic | 35.0% | |
| TACAAGAGCTGTTTATGACT+AGG | + | chr3_2:20795500-20795519 | Msa0398790:intron | 35.0% | |
| AGGTGTCTTTGACAAAATAG+AGG | + | chr3_2:20795825-20795844 | Msa0398790:intron | 35.0% | |
| ! | CGTATTCATGCAATTTTGCA+GGG | - | chr3_2:20795965-20795984 | None:intergenic | 35.0% |
| ! | ACGTATTCATGCAATTTTGC+AGG | - | chr3_2:20795966-20795985 | None:intergenic | 35.0% |
| AACCAAGTCTCAGACATAAA+AGG | - | chr3_2:20796131-20796150 | None:intergenic | 35.0% | |
| GTAGTAGGATCCTATTATCT+CGG | + | chr3_2:20796231-20796250 | Msa0398790:intron | 35.0% | |
| TAAATCGCAACCGAGATAAT+AGG | - | chr3_2:20796244-20796263 | None:intergenic | 35.0% | |
| AGCATAGCAAATGAACATGT+CGG | - | chr3_2:20796705-20796724 | None:intergenic | 35.0% | |
| ! | AAATTCATCCGCGTGTTATT+AGG | + | chr3_2:20796871-20796890 | Msa0398790:three_prime_UTR | 35.0% |
| ! | AATTCATCCGCGTGTTATTA+GGG | + | chr3_2:20796872-20796891 | Msa0398790:three_prime_UTR | 35.0% |
| AATCATTCCCTAATAACACG+CGG | - | chr3_2:20796882-20796901 | None:intergenic | 35.0% | |
| TACATTACCGATGTATCACA+CGG | + | chr3_2:20797035-20797054 | Msa0398790:three_prime_UTR | 35.0% | |
| TACTGATACGAGATTGTTGG+AGG | - | chr3_2:20790452-20790471 | None:intergenic | 40.0% | |
| !! | AGGTACTGATACGAGATTGT+TGG | - | chr3_2:20790455-20790474 | None:intergenic | 40.0% |
| ! | TGTTGTTGGTTGGTTGGTTA+AGG | - | chr3_2:20790475-20790494 | None:intergenic | 40.0% |
| ! | AAACGTTGTTGTTGGTTGGT+TGG | - | chr3_2:20790481-20790500 | None:intergenic | 40.0% |
| TAAAGCCATTGACACGAACT+GGG | - | chr3_2:20790619-20790638 | None:intergenic | 40.0% | |
| CGGACAATGTCGATATTGTT+AGG | + | chr3_2:20791037-20791056 | Msa0398790:intron | 40.0% | |
| TGGAAAATGCCACCAAAACT+CGG | - | chr3_2:20791110-20791129 | None:intergenic | 40.0% | |
| CAATCGGAATTCAAACGAAG+TGG | - | chr3_2:20791130-20791149 | None:intergenic | 40.0% | |
| GTTTGAATTCCGATTGAGAG+AGG | + | chr3_2:20791134-20791153 | Msa0398790:intron | 40.0% | |
| AAATAGGCACCTCTCTCAAT+CGG | - | chr3_2:20791146-20791165 | None:intergenic | 40.0% | |
| !! | GTTAAGGGAGTGGATTGATA+AGG | + | chr3_2:20791211-20791230 | Msa0398790:intron | 40.0% |
| CGGAGAATCACAGATAAATG+TGG | + | chr3_2:20791367-20791386 | Msa0398790:intron | 40.0% | |
| CTGTTATGTTGAGGTCTAGA+TGG | + | chr3_2:20791440-20791459 | Msa0398790:intron | 40.0% | |
| AACATGTTGTCCTCTTTCGA+AGG | + | chr3_2:20791785-20791804 | Msa0398790:intron | 40.0% | |
| ACATGTTGTCCTCTTTCGAA+GGG | + | chr3_2:20791786-20791805 | Msa0398790:intron | 40.0% | |
| ATTGCTAAACCCTTCGAAAG+AGG | - | chr3_2:20791798-20791817 | None:intergenic | 40.0% | |
| !! | GGATAGAAATTCTGGAGCTA+TGG | + | chr3_2:20791925-20791944 | Msa0398790:intron | 40.0% |
| !! | ATTCTGGAGCTATGGAAGAA+TGG | + | chr3_2:20791933-20791952 | Msa0398790:CDS | 40.0% |
| !!! | ACGAGCTTGCTGAATTTTGT+GGG | + | chr3_2:20792009-20792028 | Msa0398790:CDS | 40.0% |
| ! | AATTTTCACAGAGCAATGGG+TGG | + | chr3_2:20792140-20792159 | Msa0398790:intron | 40.0% |
| !! | TGTTCCTTTTGAGGAAGCAT+TGG | + | chr3_2:20792166-20792185 | Msa0398790:CDS | 40.0% |
| ! | AGTCTAAGGCAAGAGCAATA+GGG | - | chr3_2:20792405-20792424 | None:intergenic | 40.0% |
| ! | AAGTCTAAGGCAAGAGCAAT+AGG | - | chr3_2:20792406-20792425 | None:intergenic | 40.0% |
| ! | GCCTTAGACTTTTTACTTGG+TGG | + | chr3_2:20792415-20792434 | Msa0398790:intron | 40.0% |
| AAGCTCTTGCCATTGCAAAA+AGG | + | chr3_2:20792511-20792530 | Msa0398790:intron | 40.0% | |
| AGCTCTTGCCATTGCAAAAA+GGG | + | chr3_2:20792512-20792531 | Msa0398790:intron | 40.0% | |
| ! | AGATCCAACCCTTTTTGCAA+TGG | - | chr3_2:20792523-20792542 | None:intergenic | 40.0% |
| CAGCAGTGTTGTAGATTTGT+AGG | + | chr3_2:20792733-20792752 | Msa0398790:intron | 40.0% | |
| TCATACAGGCATGGAAAACT+CGG | - | chr3_2:20792782-20792801 | None:intergenic | 40.0% | |
| ATGAGTACATCATACAGGCA+TGG | - | chr3_2:20792791-20792810 | None:intergenic | 40.0% | |
| GATGAATCCAGATAAAGTGC+AGG | + | chr3_2:20792825-20792844 | Msa0398790:intron | 40.0% | |
| TTCTAACCCTGCACTTTATC+TGG | - | chr3_2:20792835-20792854 | None:intergenic | 40.0% | |
| TAAGAGTTTAGTCACTCTCC+CGG | + | chr3_2:20792866-20792885 | Msa0398790:intron | 40.0% | |
| AAGTTACGTTTGGAGAAACC+GGG | - | chr3_2:20792887-20792906 | None:intergenic | 40.0% | |
| TAAGGGCTGTAAGTTACGTT+TGG | - | chr3_2:20792897-20792916 | None:intergenic | 40.0% | |
| TCCCCTTCCTAATGCTTATT+TGG | + | chr3_2:20792949-20792968 | Msa0398790:intron | 40.0% | |
| !! | TATAGCTTTGGACACAATGC+AGG | - | chr3_2:20793027-20793046 | None:intergenic | 40.0% |
| !! | TCGGTAAGTTGATACTAGTG+TGG | + | chr3_2:20793159-20793178 | Msa0398790:intron | 40.0% |
| TGTTAAGAATCATGGATCGC+AGG | - | chr3_2:20793357-20793376 | None:intergenic | 40.0% | |
| !! | AAAGGGGTGTCTTGATTCAA+CGG | + | chr3_2:20793457-20793476 | Msa0398790:intron | 40.0% |
| !! | GGTCATATAGGTTTGAGTTG+CGG | + | chr3_2:20793505-20793524 | Msa0398790:intron | 40.0% |
| TAAAGTAGGCAGTTAGGCTT+TGG | - | chr3_2:20793699-20793718 | None:intergenic | 40.0% | |
| TCTCCAATTGTATCCTGAAC+TGG | + | chr3_2:20793744-20793763 | Msa0398790:intron | 40.0% | |
| TGACCAGTTCAGGATACAAT+TGG | - | chr3_2:20793750-20793769 | None:intergenic | 40.0% | |
| CTGGTCAACTCAGACATATT+TGG | + | chr3_2:20793763-20793782 | Msa0398790:intron | 40.0% | |
| AGGGGAAAGCCTGAATATTA+AGG | - | chr3_2:20793807-20793826 | None:intergenic | 40.0% | |
| TTAATATTCAGGCTTTCCCC+TGG | + | chr3_2:20793806-20793825 | Msa0398790:intron | 40.0% | |
| GATTAACTCTTCAATGCCAG+GGG | - | chr3_2:20793825-20793844 | None:intergenic | 40.0% | |
| GGATTAACTCTTCAATGCCA+GGG | - | chr3_2:20793826-20793845 | None:intergenic | 40.0% | |
| TGGATTAACTCTTCAATGCC+AGG | - | chr3_2:20793827-20793846 | None:intergenic | 40.0% | |
| !! | TGCCATTAGCCTTTAGTTTC+TGG | - | chr3_2:20793847-20793866 | None:intergenic | 40.0% |
| GCATGTATATCTGATCTCAG+GGG | + | chr3_2:20793868-20793887 | Msa0398790:CDS | 40.0% | |
| CATGTATATCTGATCTCAGG+GGG | + | chr3_2:20793869-20793888 | Msa0398790:CDS | 40.0% | |
| AAAACCAGTACATGATGTCC+TGG | + | chr3_2:20794179-20794198 | Msa0398790:intron | 40.0% | |
| AGCGTATTGTGGAACAATAG+TGG | - | chr3_2:20794334-20794353 | None:intergenic | 40.0% | |
| GTGAGTGACTTGATGAACAT+AGG | + | chr3_2:20794526-20794545 | Msa0398790:intron | 40.0% | |
| CAGCTCCTAACTTATGTTCA+TGG | - | chr3_2:20794661-20794680 | None:intergenic | 40.0% | |
| CATGAACATAAGTTAGGAGC+TGG | + | chr3_2:20794659-20794678 | Msa0398790:intron | 40.0% | |
| !!! | CAACTACTTTTTGGAAGCTC+TGG | + | chr3_2:20794911-20794930 | Msa0398790:CDS | 40.0% |
| TGCAGTCGAACAAATCAAGA+AGG | + | chr3_2:20794991-20795010 | Msa0398790:CDS | 40.0% | |
| GCATTAACTATGATCGGAGA+TGG | + | chr3_2:20795102-20795121 | Msa0398790:CDS | 40.0% | |
| ! | TGGTTAGCTCCATTAGGTTT+AGG | + | chr3_2:20795382-20795401 | Msa0398790:intron | 40.0% |
| TAGCTCCATTAGGTTTAGGA+AGG | + | chr3_2:20795386-20795405 | Msa0398790:intron | 40.0% | |
| TCCATTAGGTTTAGGAAGGT+GGG | + | chr3_2:20795390-20795409 | Msa0398790:intron | 40.0% | |
| AGAGCTGTTTATGACTAGGA+AGG | + | chr3_2:20795504-20795523 | Msa0398790:intron | 40.0% | |
| CTCTTCATACACGTGTTAGA+AGG | - | chr3_2:20795592-20795611 | None:intergenic | 40.0% | |
| CCTGTACAAGTATGGACTTT+GGG | - | chr3_2:20795626-20795645 | None:intergenic | 40.0% | |
| TCCTGTACAAGTATGGACTT+TGG | - | chr3_2:20795627-20795646 | None:intergenic | 40.0% | |
| ATTCAAGTGTAATTCAGGGG+AGG | + | chr3_2:20795805-20795824 | Msa0398790:intron | 40.0% | |
| TATTCACGATCTGGATCAGT+AGG | - | chr3_2:20795921-20795940 | None:intergenic | 40.0% | |
| ! | CAGGGATTTTACTCAACTCA+GGG | - | chr3_2:20795947-20795966 | None:intergenic | 40.0% |
| AACATGAAAGACTCAAAGCC+AGG | - | chr3_2:20796032-20796051 | None:intergenic | 40.0% | |
| !! | TGCCTTTTATGTCTGAGACT+TGG | + | chr3_2:20796126-20796145 | Msa0398790:intron | 40.0% |
| GAGTAGAATGCTTCGATCTT+TGG | + | chr3_2:20796309-20796328 | Msa0398790:intron | 40.0% | |
| ATGATCTTGCTAACCCCTTT+CGG | + | chr3_2:20796349-20796368 | Msa0398790:intron | 40.0% | |
| ATCTTGCATCAAACCGAAAG+GGG | - | chr3_2:20796365-20796384 | None:intergenic | 40.0% | |
| GATCTTGCATCAAACCGAAA+GGG | - | chr3_2:20796366-20796385 | None:intergenic | 40.0% | |
| AGATCTTGCATCAAACCGAA+AGG | - | chr3_2:20796367-20796386 | None:intergenic | 40.0% | |
| !! | GATCTCGATTTTGACAACCT+TGG | + | chr3_2:20796382-20796401 | Msa0398790:intron | 40.0% |
| GTCAAAATGACATACGACCA+AGG | - | chr3_2:20796402-20796421 | None:intergenic | 40.0% | |
| ! | TGTGTCATTCTTAGCCTCTT+AGG | + | chr3_2:20796602-20796621 | Msa0398790:intron | 40.0% |
| !! | GACATGTTCATTTGCTATGC+TGG | + | chr3_2:20796704-20796723 | Msa0398790:CDS | 40.0% |
| AACATACAAACGCAGTGGAA+GGG | - | chr3_2:20796998-20797017 | None:intergenic | 40.0% | |
| AAACATACAAACGCAGTGGA+AGG | - | chr3_2:20796999-20797018 | None:intergenic | 40.0% | |
| ACTGAAACATACAAACGCAG+TGG | - | chr3_2:20797003-20797022 | None:intergenic | 40.0% | |
| GTTAAATTTCACTGCGATGC+GGG | - | chr3_2:20797100-20797119 | None:intergenic | 40.0% | |
| GGTTAAATTTCACTGCGATG+CGG | - | chr3_2:20797101-20797120 | None:intergenic | 40.0% | |
| !! | ATTGTTGGAGGTTGGTGTCA+TGG | - | chr3_2:20790440-20790459 | None:intergenic | 45.0% |
| GATACGAGATTGTTGGAGGT+TGG | - | chr3_2:20790448-20790467 | None:intergenic | 45.0% | |
| ATCAACCCAGTTCGTGTCAA+TGG | + | chr3_2:20790611-20790630 | Msa0398790:CDS | 45.0% | |
| GTAAAGCCATTGACACGAAC+TGG | - | chr3_2:20790620-20790639 | None:intergenic | 45.0% | |
| GTAGCAGCAGCCATAATCAA+AGG | - | chr3_2:20790746-20790765 | None:intergenic | 45.0% | |
| ATTATGGCTGCTGCTACTGT+TGG | + | chr3_2:20790749-20790768 | Msa0398790:CDS | 45.0% | |
| GAGAACATCGTTCCTTCCAA+AGG | + | chr3_2:20790794-20790813 | Msa0398790:CDS | 45.0% | |
| TAGGCTTAACATGTTCACCG+TGG | + | chr3_2:20791056-20791075 | Msa0398790:intron | 45.0% | |
| CGAGGTCTGAATTCAAACCA+CGG | - | chr3_2:20791076-20791095 | None:intergenic | 45.0% | |
| TCAAATAGGATTACCTCCGG+CGG | + | chr3_2:20791181-20791200 | Msa0398790:intron | 45.0% | |
| !! | AAGGGAGTGGATTGATAAGG+AGG | + | chr3_2:20791214-20791233 | Msa0398790:intron | 45.0% |
| TAACGTCTGCTGTCATGTTG+CGG | + | chr3_2:20791332-20791351 | Msa0398790:intron | 45.0% | |
| CCTCAATCATGGTCACATTG+CGG | + | chr3_2:20791399-20791418 | Msa0398790:intron | 45.0% | |
| !! | ATGGGGGTGTTTAGAGAAGT+GGG | + | chr3_2:20791549-20791568 | Msa0398790:intron | 45.0% |
| TGATGCAGTGTGCTTTGATG+TGG | + | chr3_2:20791956-20791975 | Msa0398790:CDS | 45.0% | |
| GCTCGTCAATTCCTTCATCT+AGG | - | chr3_2:20791995-20792014 | None:intergenic | 45.0% | |
| !!! | GACGAGCTTGCTGAATTTTG+TGG | + | chr3_2:20792008-20792027 | Msa0398790:CDS | 45.0% |
| !!! | CGAGCTTGCTGAATTTTGTG+GGG | + | chr3_2:20792010-20792029 | Msa0398790:CDS | 45.0% |
| CAGGAAAAGCTGTTGCAGAA+TGG | + | chr3_2:20792033-20792052 | Msa0398790:CDS | 45.0% | |
| CACCAAGGTATGATTGAGTC+CGG | + | chr3_2:20792252-20792271 | Msa0398790:intron | 45.0% | |
| !! | AGTCCGGCTGATTTTGTCTT+GGG | + | chr3_2:20792268-20792287 | Msa0398790:intron | 45.0% |
| !! | ACATTAAGTTGATCCGGCAG+CGG | + | chr3_2:20792367-20792386 | Msa0398790:intron | 45.0% |
| ! | GTCTAAGGCAAGAGCAATAG+GGG | - | chr3_2:20792404-20792423 | None:intergenic | 45.0% |
| CTTGCCATTGCAAAAAGGGT+TGG | + | chr3_2:20792516-20792535 | Msa0398790:intron | 45.0% | |
| !!! | CACCCCTTTAAAGTTTTGGC+TGG | - | chr3_2:20793446-20793465 | None:intergenic | 45.0% |
| TAAGTTGCTACTGCGTCACT+AGG | + | chr3_2:20793481-20793500 | Msa0398790:intron | 45.0% | |
| !! | TGTCTAGTCAGAGTTTTGGC+TGG | - | chr3_2:20793656-20793675 | None:intergenic | 45.0% |
| ! | ATGTCTGAGTTGACCAGTTC+AGG | - | chr3_2:20793760-20793779 | None:intergenic | 45.0% |
| TATGCCAGGACATCATGTAC+TGG | - | chr3_2:20794186-20794205 | None:intergenic | 45.0% | |
| AGCACTGTAGCGCACAAAAT+TGG | + | chr3_2:20794302-20794321 | Msa0398790:intron | 45.0% | |
| GCTATAGCACTGTAGTGTAG+CGG | + | chr3_2:20794393-20794412 | Msa0398790:intron | 45.0% | |
| TTGTAGATCGCGGGAAATGA+TGG | - | chr3_2:20794431-20794450 | None:intergenic | 45.0% | |
| CTTGCATGGTGACAAAAGAG+AGG | - | chr3_2:20794618-20794637 | None:intergenic | 45.0% | |
| GACAGGCTTCATAAGAAGTG+TGG | - | chr3_2:20794849-20794868 | None:intergenic | 45.0% | |
| GAGTATACTTCAAGGAGTGG+AGG | + | chr3_2:20794959-20794978 | Msa0398790:CDS | 45.0% | |
| !! | CTTGATTTGTTCGACTGCAG+TGG | - | chr3_2:20794990-20795009 | None:intergenic | 45.0% |
| !! | AGATGGCGCAACTGATTTTG+AGG | + | chr3_2:20795119-20795138 | Msa0398790:CDS | 45.0% |
| TGTTCCTGCTAGAAGTTGCA+GGG | + | chr3_2:20795265-20795284 | Msa0398790:intron | 45.0% | |
| ! | AGTTGCAGGGGTAGTTTTCT+AGG | + | chr3_2:20795278-20795297 | Msa0398790:intron | 45.0% |
| !! | AGAGGTGGATAGTGGATTAG+AGG | + | chr3_2:20795322-20795341 | Msa0398790:intron | 45.0% |
| ! | TAGGCTTGGTTAGCTCCATT+AGG | + | chr3_2:20795376-20795395 | Msa0398790:intron | 45.0% |
| CTCCATTAGGTTTAGGAAGG+TGG | + | chr3_2:20795389-20795408 | Msa0398790:intron | 45.0% | |
| CATTTGAGTCTTGATTGCCC+TGG | + | chr3_2:20795458-20795477 | Msa0398790:intron | 45.0% | |
| TTTATGACTAGGAAGGCTGC+TGG | + | chr3_2:20795511-20795530 | Msa0398790:intron | 45.0% | |
| TTATGACTAGGAAGGCTGCT+GGG | + | chr3_2:20795512-20795531 | Msa0398790:intron | 45.0% | |
| CCCAAAGTCCATACTTGTAC+AGG | + | chr3_2:20795623-20795642 | Msa0398790:intron | 45.0% | |
| TCAGGGTTCTATTCACGATC+TGG | - | chr3_2:20795930-20795949 | None:intergenic | 45.0% | |
| ! | GCAGGGATTTTACTCAACTC+AGG | - | chr3_2:20795948-20795967 | None:intergenic | 45.0% |
| CGTGAAATCGGCATGAAATC+TGG | + | chr3_2:20795983-20796002 | Msa0398790:intron | 45.0% | |
| CCAGGATGGTTAGAATCGTA+TGG | - | chr3_2:20796014-20796033 | None:intergenic | 45.0% | |
| CCATACGATTCTAACCATCC+TGG | + | chr3_2:20796011-20796030 | Msa0398790:intron | 45.0% | |
| TGAAAGACTCAAAGCCAGGA+TGG | - | chr3_2:20796028-20796047 | None:intergenic | 45.0% | |
| CTGTTGCTGCAAAAGCTGAT+TGG | + | chr3_2:20796744-20796763 | Msa0398790:CDS | 45.0% | |
| CATAGAAGTGAGGAAGCAGA+TGG | + | chr3_2:20796843-20796862 | Msa0398790:three_prime_UTR | 45.0% | |
| !!! | TTTATATTTTTTAATTTCTT+TGG | + | chr3_2:20792087-20792106 | Msa0398790:intron | 5.0% |
| !! | AATATATAAAAAACTATAAT+CGG | + | chr3_2:20793140-20793159 | Msa0398790:intron | 5.0% |
| GTCCGTAAGACTTGGCTCAA+CGG | + | chr3_2:20791017-20791036 | Msa0398790:intron | 50.0% | |
| GTCCGTTGAGCCAAGTCTTA+CGG | - | chr3_2:20791022-20791041 | None:intergenic | 50.0% | |
| ! | GGTTGATGCAGCCTCAATCA+TGG | + | chr3_2:20791388-20791407 | Msa0398790:intron | 50.0% |
| CCGCAATGTGACCATGATTG+AGG | - | chr3_2:20791402-20791421 | None:intergenic | 50.0% | |
| TGTTGAGGTCTAGATGGTCG+TGG | + | chr3_2:20791446-20791465 | Msa0398790:intron | 50.0% | |
| !! | CATGGGGGTGTTTAGAGAAG+TGG | + | chr3_2:20791548-20791567 | Msa0398790:intron | 50.0% |
| AGCACTGTGTGCCTAGATGA+AGG | + | chr3_2:20791981-20792000 | Msa0398790:CDS | 50.0% | |
| ! | CTTGCTGAATTTTGTGGGGC+AGG | + | chr3_2:20792014-20792033 | Msa0398790:CDS | 50.0% |
| !! | CTGTTGCAGAATGGACTGCA+AGG | + | chr3_2:20792042-20792061 | Msa0398790:CDS | 50.0% |
| !! | GGGTGGTTCTGTTCCTTTTG+AGG | + | chr3_2:20792157-20792176 | Msa0398790:CDS | 50.0% |
| GCAGCCAATGCTTCCTCAAA+AGG | - | chr3_2:20792173-20792192 | None:intergenic | 50.0% | |
| !! | TTGAGGAAGCATTGGCTGCT+AGG | + | chr3_2:20792174-20792193 | Msa0398790:CDS | 50.0% |
| TTCTTCTGCAAAGGCCACCA+AGG | + | chr3_2:20792237-20792256 | Msa0398790:CDS | 50.0% | |
| CGGACTCAATCATACCTTGG+TGG | - | chr3_2:20792254-20792273 | None:intergenic | 50.0% | |
| AGCCGGACTCAATCATACCT+TGG | - | chr3_2:20792257-20792276 | None:intergenic | 50.0% | |
| !! | GAGTCCGGCTGATTTTGTCT+TGG | + | chr3_2:20792267-20792286 | Msa0398790:intron | 50.0% |
| CTGCCCAAGACAAAATCAGC+CGG | - | chr3_2:20792274-20792293 | None:intergenic | 50.0% | |
| CAGGCATGGAAAACTCGGTT+TGG | - | chr3_2:20792777-20792796 | None:intergenic | 50.0% | |
| ATTATAGCGCTCAAGCGCAG+TGG | + | chr3_2:20793214-20793233 | Msa0398790:intron | 50.0% | |
| GCGTCACTAGGAGGTCATAT+AGG | + | chr3_2:20793493-20793512 | Msa0398790:intron | 50.0% | |
| AAGCCTGTCGCGTCAATACT+CGG | + | chr3_2:20794860-20794879 | Msa0398790:intron | 50.0% | |
| !! | TGGAAGCTCTGGACAGTTTC+TGG | + | chr3_2:20794922-20794941 | Msa0398790:CDS | 50.0% |
| !! | GGAAGCTCTGGACAGTTTCT+GGG | + | chr3_2:20794923-20794942 | Msa0398790:CDS | 50.0% |
| GTAGGTGCTTCAGTAAGCCT+TGG | - | chr3_2:20795222-20795241 | None:intergenic | 50.0% | |
| GTGTTCCTGCTAGAAGTTGC+AGG | + | chr3_2:20795264-20795283 | Msa0398790:intron | 50.0% | |
| GTTCCTGCTAGAAGTTGCAG+GGG | + | chr3_2:20795266-20795285 | Msa0398790:intron | 50.0% | |
| AAGTGCAGAGAGGTGGATAG+TGG | + | chr3_2:20795314-20795333 | Msa0398790:intron | 50.0% | |
| GCCCACCTTCCTAAACCTAA+TGG | - | chr3_2:20795394-20795413 | None:intergenic | 50.0% | |
| TGCTCAGGTATTAGCCCACA+CGG | + | chr3_2:20795423-20795442 | Msa0398790:intron | 50.0% | |
| TGTACGAGTCATCGCTGTCT+CGG | - | chr3_2:20795484-20795503 | None:intergenic | 50.0% | |
| CAGGTCAGGTGGTTCAGTTT+CGG | + | chr3_2:20795565-20795584 | Msa0398790:intron | 50.0% | |
| AGGTCAGGTGGTTCAGTTTC+GGG | + | chr3_2:20795566-20795585 | Msa0398790:intron | 50.0% | |
| GTGTATGAAGAGCCGAGTCA+TGG | + | chr3_2:20795600-20795619 | Msa0398790:intron | 50.0% | |
| ATGGACTTTGGGCCATGACT+CGG | - | chr3_2:20795615-20795634 | None:intergenic | 50.0% | |
| CACATTTAGGCTCGTAGACC+AGG | + | chr3_2:20796674-20796693 | Msa0398790:intron | 50.0% | |
| ATTTAGGCTCGTAGACCAGG+TGG | + | chr3_2:20796677-20796696 | Msa0398790:intron | 50.0% | |
| TTCACTGCGATGCGGGAAAA+TGG | - | chr3_2:20797093-20797112 | None:intergenic | 50.0% | |
| ! | GCAGTCGTGTGTCCGAGTTT+TGG | + | chr3_2:20791095-20791114 | Msa0398790:intron | 55.0% |
| !! | GTCGTGTGTCCGAGTTTTGG+TGG | + | chr3_2:20791098-20791117 | Msa0398790:intron | 55.0% |
| AATAGGATTACCTCCGGCGG+TGG | + | chr3_2:20791184-20791203 | Msa0398790:intron | 55.0% | |
| ATAGGATTACCTCCGGCGGT+GGG | + | chr3_2:20791185-20791204 | Msa0398790:intron | 55.0% | |
| GGCAAGAGCAATAGGGGAGT+AGG | - | chr3_2:20792398-20792417 | None:intergenic | 55.0% | |
| GTTGCTACTGCGTCACTAGG+AGG | + | chr3_2:20793484-20793503 | Msa0398790:intron | 55.0% | |
| AGCCTGTCGCGTCAATACTC+GGG | + | chr3_2:20794861-20794880 | Msa0398790:intron | 55.0% | |
| !! | ATCCCGAGTATTGACGCGAC+AGG | - | chr3_2:20794866-20794885 | None:intergenic | 55.0% |
| CTACCCCTGCAACTTCTAGC+AGG | - | chr3_2:20795272-20795291 | None:intergenic | 55.0% | |
| ACCTCTCTGCACTTGAGAGC+GGG | - | chr3_2:20795308-20795327 | None:intergenic | 55.0% | |
| CACCTCTCTGCACTTGAGAG+CGG | - | chr3_2:20795309-20795328 | None:intergenic | 55.0% | |
| TGTTGCGGGATCAACCGTGT+GGG | - | chr3_2:20795440-20795459 | None:intergenic | 55.0% | |
| ATGTTGCGGGATCAACCGTG+TGG | - | chr3_2:20795441-20795460 | None:intergenic | 55.0% | |
| GGTAGCGAGCACGTTATGCT+CGG | + | chr3_2:20795539-20795558 | Msa0398790:intron | 55.0% | |
| AGCACGTTATGCTCGGATGC+AGG | + | chr3_2:20795546-20795565 | Msa0398790:intron | 55.0% | |
| GTTATGCTCGGATGCAGGTC+AGG | + | chr3_2:20795551-20795570 | Msa0398790:intron | 55.0% | |
| ATGAACATGTCGGCACCACC+TGG | - | chr3_2:20796695-20796714 | None:intergenic | 55.0% | |
| ! | GCAGCTTTTGCTTCGACGAG+CGG | + | chr3_2:20797143-20797162 | Msa0398790:three_prime_UTR | 55.0% |
| AACTCGGACACACGACTGCG+AGG | - | chr3_2:20791094-20791113 | None:intergenic | 60.0% | |
| TAGGATTACCTCCGGCGGTG+GGG | + | chr3_2:20791186-20791205 | Msa0398790:intron | 60.0% | |
| ACCCGCTCTCAAGTGCAGAG+AGG | + | chr3_2:20795304-20795323 | Msa0398790:intron | 60.0% | |
| CGCTCTCAAGTGCAGAGAGG+TGG | + | chr3_2:20795307-20795326 | Msa0398790:intron | 60.0% | |
| GTGGGCCGTATCTCATGCTC+AGG | + | chr3_2:20795408-20795427 | Msa0398790:intron | 60.0% | |
| AGTCATCGCTGTCTCGGCCA+GGG | - | chr3_2:20795478-20795497 | None:intergenic | 60.0% | |
| CTAGGAAGGCTGCTGGGACT+TGG | + | chr3_2:20795518-20795537 | Msa0398790:intron | 60.0% | |
| ATGCTCGGATGCAGGTCAGG+TGG | + | chr3_2:20795554-20795573 | Msa0398790:intron | 60.0% | |
| AGGATTACCTCCGGCGGTGG+GGG | + | chr3_2:20791187-20791206 | Msa0398790:intron | 65.0% | |
| TCCGGCGGTGGGGGAGTTAA+GGG | + | chr3_2:20791196-20791215 | Msa0398790:intron | 65.0% | |
| TCCCTTAACTCCCCCACCGC+CGG | - | chr3_2:20791200-20791219 | None:intergenic | 65.0% | |
| CGGTGGGGGAGTTAAGGGAG+TGG | + | chr3_2:20791201-20791220 | Msa0398790:intron | 65.0% | |
| GGAGTAGGAACTGCCGCTGC+CGG | - | chr3_2:20792383-20792402 | None:intergenic | 65.0% | |
| GAGTCATCGCTGTCTCGGCC+AGG | - | chr3_2:20795479-20795498 | None:intergenic | 65.0% | |
| CTTAACTCCCCCACCGCCGG+AGG | - | chr3_2:20791197-20791216 | None:intergenic | 70.0% | |
| CTCCGGCGGTGGGGGAGTTA+AGG | + | chr3_2:20791195-20791214 | Msa0398790:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 20790388 | 20797189 | 20790388 | ID=Msa0398790;Name=Msa0398790 |
| chr3_2 | mRNA | 20790388 | 20797189 | 20790388 | ID=Msa0398790-mRNA-1;Parent=Msa0398790;Name=Msa0398790-mRNA-1;_AED=0.08;_eAED=0.08;_QI=199|0.83|0.85|1|1|1|7|381|306 |
| chr3_2 | exon | 20790388 | 20790815 | 20790388 | ID=Msa0398790-mRNA-1:exon:4555;Parent=Msa0398790-mRNA-1 |
| chr3_2 | exon | 20791931 | 20792063 | 20791931 | ID=Msa0398790-mRNA-1:exon:4556;Parent=Msa0398790-mRNA-1 |
| chr3_2 | exon | 20792151 | 20792258 | 20792151 | ID=Msa0398790-mRNA-1:exon:4557;Parent=Msa0398790-mRNA-1 |
| chr3_2 | exon | 20793817 | 20793910 | 20793817 | ID=Msa0398790-mRNA-1:exon:4558;Parent=Msa0398790-mRNA-1 |
| chr3_2 | exon | 20794863 | 20795012 | 20794863 | ID=Msa0398790-mRNA-1:exon:4559;Parent=Msa0398790-mRNA-1 |
| chr3_2 | exon | 20795087 | 20795167 | 20795087 | ID=Msa0398790-mRNA-1:exon:4560;Parent=Msa0398790-mRNA-1 |
| chr3_2 | exon | 20796683 | 20797189 | 20796683 | ID=Msa0398790-mRNA-1:exon:4561;Parent=Msa0398790-mRNA-1 |
| chr3_2 | five_prime_UTR | 20790388 | 20790586 | 20790388 | ID=Msa0398790-mRNA-1:five_prime_utr;Parent=Msa0398790-mRNA-1 |
| chr3_2 | CDS | 20790587 | 20790815 | 20790587 | ID=Msa0398790-mRNA-1:cds;Parent=Msa0398790-mRNA-1 |
| chr3_2 | CDS | 20791931 | 20792063 | 20791931 | ID=Msa0398790-mRNA-1:cds;Parent=Msa0398790-mRNA-1 |
| chr3_2 | CDS | 20792151 | 20792258 | 20792151 | ID=Msa0398790-mRNA-1:cds;Parent=Msa0398790-mRNA-1 |
| chr3_2 | CDS | 20793817 | 20793910 | 20793817 | ID=Msa0398790-mRNA-1:cds;Parent=Msa0398790-mRNA-1 |
| chr3_2 | CDS | 20794863 | 20795012 | 20794863 | ID=Msa0398790-mRNA-1:cds;Parent=Msa0398790-mRNA-1 |
| chr3_2 | CDS | 20795087 | 20795167 | 20795087 | ID=Msa0398790-mRNA-1:cds;Parent=Msa0398790-mRNA-1 |
| chr3_2 | CDS | 20796683 | 20796808 | 20796683 | ID=Msa0398790-mRNA-1:cds;Parent=Msa0398790-mRNA-1 |
| chr3_2 | three_prime_UTR | 20796809 | 20797189 | 20796809 | ID=Msa0398790-mRNA-1:three_prime_utr;Parent=Msa0398790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
