AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0934890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934890 MtrunA17_Chr6g0450741 96.857 700 22 0 1 700 1 700 0.0 1399
Msa0934890 MtrunA17_Chr3g0117701 62.373 590 200 7 128 699 182 767 0.0 751
Msa0934890 MtrunA17_Chr3g0117701 50.980 102 49 1 1 102 1 101 4.07e-19 92.8
Msa0934890 MtrunA17_Chr8g0388631 67.126 508 166 1 186 693 68 574 0.0 723
Msa0934890 MtrunA17_Chr4g0059101 54.674 706 266 8 1 688 1 670 0.0 723
Msa0934890 MtrunA17_Chr8g0346601 61.248 529 194 4 182 708 49 568 0.0 665
Msa0934890 MtrunA17_Chr1g0184181 27.054 499 331 7 186 669 94 574 6.92e-44 169
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934890 AT3G27960.1 64.706 680 209 13 17 691 2 655 0.0 843
Msa0934890 AT3G27960.3 64.706 680 209 13 17 691 2 655 0.0 843
Msa0934890 AT3G27960.2 64.239 618 191 12 17 629 2 594 0.0 761
Msa0934890 AT1G27500.2 57.433 639 257 6 55 688 25 653 0.0 725
Msa0934890 AT1G27500.1 57.433 639 257 6 55 688 14 642 0.0 723
Msa0934890 AT4G10840.1 63.301 515 177 3 186 690 79 591 0.0 686
Msa0934890 AT4G10840.2 62.555 454 159 2 186 629 79 531 0.0 603
Msa0934890 AT2G31240.1 26.602 515 359 7 157 665 89 590 5.35e-41 160

Find 217 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACAAGGTTGTTTATAATT+TGG 0.149816 6_3:-5031992 None:intergenic
CGATTGTCGCTTTAGTATTT+TGG 0.158051 6_3:-5036467 None:intergenic
CGAAGAGGCTAGGACTATTT+TGG 0.164311 6_3:+5035023 Msa0934890:CDS
GCAACAATTTACTGTAATTT+AGG 0.168017 6_3:+5033968 Msa0934890:CDS
CCGAACAAGGCTCTTAATTT+TGG 0.175851 6_3:+5033863 Msa0934890:CDS
AGGATTTCCCAAGGCGATTT+TGG 0.191457 6_3:-5036954 None:intergenic
TCTTGGACCATTCTTGTTAA+AGG 0.191617 6_3:+5033808 Msa0934890:CDS
CAGAGGCTCGGGAGCCCTTC+TGG 0.199561 6_3:-5037233 None:intergenic
CAGAGGCTCGGGAGCCCTTC+TGG 0.199561 6_3:-5037263 None:intergenic
GAAATTCAAGGGCAGGTCTT+AGG 0.230396 6_3:+5034160 Msa0934890:CDS
CTTGTCAGAGCCTTGCTTAA+AGG 0.248660 6_3:-5036301 None:intergenic
ACCTCCAGAAAGGCTCTAAA+AGG 0.249940 6_3:+5037197 Msa0934890:CDS
GAATCACTTTGAATACTTCT+TGG 0.258920 6_3:-5033362 None:intergenic
TTCAGGAGGTCATCAAGTTT+TGG 0.260871 6_3:-5037062 None:intergenic
TGAAGGGCTCCTAAGCCTTT+AGG 0.261388 6_3:-5037161 None:intergenic
CCTTGTTCCAAGACTTGTGC+TGG 0.274497 6_3:+5037025 Msa0934890:CDS
TACAAGGTTGTTTATAATTT+GGG 0.275564 6_3:-5031991 None:intergenic
TCTTAAGGCACCGCCCTTCT+AGG 0.277255 6_3:+5037295 Msa0934890:CDS
CCTGTCAGAGCCTTGCTTAA+AGG 0.290099 6_3:-5036360 None:intergenic
GGTCATCTTGTTGGATATAT+TGG 0.291335 6_3:+5033530 Msa0934890:CDS
TTACCTTCCCATTGCATCAT+AGG 0.291421 6_3:-5035106 None:intergenic
ATCAAGGATTGATTCAGAAT+TGG 0.298532 6_3:+5033508 Msa0934890:CDS
ATCAACATCGCCCGCAAATT+AGG 0.302271 6_3:+5036442 Msa0934890:CDS
TGCTTTAGAGCATTATGTTT+TGG 0.303097 6_3:+5034384 Msa0934890:CDS
ATTCTTTGGAGAATACTAAA+AGG 0.311593 6_3:+5032028 Msa0934890:five_prime_UTR
TTCAATGCCTGCAATAACTA+TGG 0.320521 6_3:+5033235 Msa0934890:exon
TGTTGGATGATTCTCTCCTT+TGG 0.321402 6_3:-5034548 None:intergenic
ATTTGCGGGCGATGTTGATT+TGG 0.321445 6_3:-5036438 None:intergenic
TGTTGGATATATTGGTGATT+TGG 0.328352 6_3:+5033538 Msa0934890:CDS
TTGTCCCAAGACTCGTGCTT+GGG 0.333669 6_3:+5037115 Msa0934890:CDS
CACATCACCAATTCCAAACT+TGG 0.334301 6_3:-5033932 None:intergenic
GGAGTTATGTATTATATGTT+AGG 0.338037 6_3:+5034847 Msa0934890:CDS
TTTGCAGGGTGTATGCAATT+AGG 0.340480 6_3:+5034076 Msa0934890:CDS
GGCTTAGGAGCCCTTCAAAA+AGG 0.340730 6_3:+5037167 Msa0934890:CDS
TAGCATAGAGCTGGACCTTC+AGG 0.341243 6_3:-5037079 None:intergenic
GCTGATCTATACAACAAAAT+AGG 0.343980 6_3:+5034595 Msa0934890:CDS
CCGTCAGAGCCTCTCCTTAG+AGG 0.347173 6_3:-5036408 None:intergenic
GGGGAAACCGATCCTCGATT+TGG 0.347286 6_3:+5034181 Msa0934890:CDS
TGAAGATGGTAAACCAAGTT+TGG 0.349399 6_3:+5033919 Msa0934890:CDS
CATGCACTAGCTAAGTTTGC+AGG 0.349500 6_3:+5034061 Msa0934890:CDS
GAGCCCTTCTGGAGGGCGCC+CGG 0.361931 6_3:-5037222 None:intergenic
AAATTCAAGGGCAGGTCTTA+GGG 0.362813 6_3:+5034161 Msa0934890:CDS
TCTGGAGGGCGCCAGAGGCT+CGG 0.366921 6_3:-5037245 None:intergenic
ATTTGGGTATGTGTTATGTT+AGG 0.378342 6_3:-5031975 None:intergenic
CTTGTTACCTTTAACAAGAA+TGG 0.379696 6_3:-5033815 None:intergenic
CAGAAGGGCTCCCGAGCCTC+TGG 0.380975 6_3:+5037234 Msa0934890:CDS
CAGAAGGGCTCCCGAGCCTC+TGG 0.380975 6_3:+5037264 Msa0934890:CDS
AATCTCTTCTAGAGAGATTC+CGG 0.387871 6_3:-5034680 None:intergenic
TTCGAAATAACAAAGCTATA+TGG 0.388088 6_3:+5036976 Msa0934890:CDS
TGCTGGAATTGAAGCACAAA+TGG 0.389026 6_3:+5034825 Msa0934890:CDS
TCAATTGATTTAGCTATTGA+TGG 0.390733 6_3:+5033383 Msa0934890:CDS
GGAGTTTATAGCAATCTTGC+CGG 0.393449 6_3:+5035081 Msa0934890:CDS
CTGGAGGGCGCCAGAGGCTC+GGG 0.394448 6_3:-5037244 None:intergenic
TCAGAATTGGGTCATCTTGT+TGG 0.395318 6_3:+5033521 Msa0934890:CDS
AACAAGAATGGTCCAAGATC+AGG 0.396193 6_3:-5033803 None:intergenic
AAAGTAGAAGTTTGCATAAG+AGG 0.396778 6_3:+5033681 Msa0934890:CDS
CTTCATTTATAGCATACCTT+TGG 0.397429 6_3:-5034987 None:intergenic
TCAAGGATTGATTCAGAATT+GGG 0.399811 6_3:+5033509 Msa0934890:CDS
AGCCTCTGGCGCCCTCCAGA+AGG 0.404741 6_3:+5037248 Msa0934890:CDS
AACAAGAGATATGATATCTT+CGG 0.406845 6_3:+5033832 Msa0934890:CDS
TCCCATTGCATCATAGGTTC+CGG 0.408071 6_3:-5035100 None:intergenic
CGTTTCTCATCATCGACATC+AGG 0.409231 6_3:-5035568 None:intergenic
TGGTAAACCAAGTTTGGAAT+TGG 0.411399 6_3:+5033925 Msa0934890:CDS
AATTCTTCCATAGTTATTGC+AGG 0.413325 6_3:-5033242 None:intergenic
CCTCTGGCGCGCTCATCTTA+AGG 0.413350 6_3:+5037280 Msa0934890:CDS
GTCTTTCATGATTTGAGAGT+TGG 0.413635 6_3:-5035671 None:intergenic
AAGATATACAACAATGTTCC+TGG 0.414393 6_3:+5034787 Msa0934890:CDS
ATCCATGAATGATATAGAAA+AGG 0.416117 6_3:+5034738 Msa0934890:CDS
CATAATATTCCTAAAGGCTT+AGG 0.419830 6_3:+5037152 Msa0934890:CDS
CTTACTGTGAAAACGCGCTT+CGG 0.420215 6_3:+5034638 Msa0934890:CDS
GATGAGCGCGCCAGAGGCTC+GGG 0.420327 6_3:-5037274 None:intergenic
AGGCGATGCTTATTTATCAT+TGG 0.422665 6_3:+5034468 Msa0934890:CDS
GGTCAACACAGTACTATTGC+TGG 0.427720 6_3:+5034808 Msa0934890:CDS
AAGCAGGAAGAGCAAGGAAC+AGG 0.427976 6_3:+5035614 Msa0934890:CDS
CTTGTTCCAAGACTTGTGCT+GGG 0.429306 6_3:+5037026 Msa0934890:CDS
GCATAAGAGGCTTGGTTTGA+AGG 0.433751 6_3:+5033754 Msa0934890:CDS
GCCTGCATCGTTTGAAGAAG+CGG 0.437353 6_3:+5034309 Msa0934890:CDS
TACATATTCCAACATTTCAA+TGG 0.441735 6_3:-5035509 None:intergenic
CCTAAGGTATCTTGATGATA+AGG 0.441931 6_3:-5035060 None:intergenic
TTGACGAGCTCGCAGATCCT+TGG 0.443199 6_3:-5036337 None:intergenic
GGTGATGTGCCTTCATGTAT+TGG 0.447562 6_3:+5033946 Msa0934890:CDS
TCAATTGAACGCTCGAGAAT+CGG 0.447729 6_3:-5034010 None:intergenic
GAGGTTTCTAGAAGCCTAGA+AGG 0.448281 6_3:-5037309 None:intergenic
GGACACAAGCAAGACCCATT+TGG 0.448379 6_3:-5034966 None:intergenic
ATCTCTTCTAGAGAGATTCC+GGG 0.451271 6_3:-5034679 None:intergenic
ACTCATATGGCGAAGAATCA+AGG 0.454260 6_3:+5033492 Msa0934890:CDS
GTTCTGATCAATCACCTTCA+AGG 0.455701 6_3:+5033459 Msa0934890:CDS
TGACGAGCTCGCAGATCCTT+GGG 0.457365 6_3:-5036336 None:intergenic
TCCATGAATGATATAGAAAA+GGG 0.457605 6_3:+5034739 Msa0934890:CDS
AGAAAGGCTCTAAAAGGGCC+CGG 0.460878 6_3:+5037203 Msa0934890:CDS
CCTTTAAGCAAGGCTCTGAC+AGG 0.461336 6_3:+5036360 Msa0934890:CDS
TTTGAATTATGTAATGAAGA+TGG 0.461930 6_3:+5033905 Msa0934890:CDS
AATGAGAAGGGAACTAGAAA+AGG 0.463055 6_3:+5033704 Msa0934890:CDS
AGGTGACACTTATGCAATGA+TGG 0.466365 6_3:+5034096 Msa0934890:CDS
GGAATTGCATTGAACCAAAT+GGG 0.466388 6_3:+5034952 Msa0934890:CDS
GCCCTTCTGGAGGGCGCCAG+AGG 0.467322 6_3:-5037250 None:intergenic
CCAAAATTAAGAGCCTTGTT+CGG 0.467434 6_3:-5033863 None:intergenic
CTTGATATTCACAAGGGAAA+CGG 0.471028 6_3:+5034283 Msa0934890:CDS
AGGTCTACCCTCGGGATCTC+CGG 0.473114 6_3:+5036925 Msa0934890:intron
TGAAAGCTATACACCTCATA+AGG 0.475448 6_3:+5033295 Msa0934890:CDS
CTTGTCCCAAGACTCGTGCT+TGG 0.479084 6_3:+5037114 Msa0934890:CDS
GAGTTAGATAATCCTGATCT+TGG 0.482765 6_3:+5033791 Msa0934890:CDS
CTCTAAGGAGAGGCTCTGAC+GGG 0.483060 6_3:+5036409 Msa0934890:CDS
TGGAATTGCATTGAACCAAA+TGG 0.484845 6_3:+5034951 Msa0934890:CDS
TCTCTAGAAGAGATTGCAAA+TGG 0.485821 6_3:+5034688 Msa0934890:CDS
AGCCCTTCTGGAGGGCGCCC+GGG 0.488000 6_3:-5037221 None:intergenic
GCCGAGTTGTTAAAAGAAGC+AGG 0.488102 6_3:+5035598 Msa0934890:CDS
AGATGAGCGCGCCAGAGGCT+CGG 0.488260 6_3:-5037275 None:intergenic
AAGGGAACTAGAAAAGGAAA+TGG 0.489596 6_3:+5033710 Msa0934890:CDS
GCAGTAAAGTTATCCTTATG+AGG 0.489807 6_3:-5033308 None:intergenic
AACCGTCATAATATTCCTAA+AGG 0.490091 6_3:+5037146 Msa0934890:CDS
GCCTCTGGCGCCCTCCAGAA+GGG 0.490538 6_3:+5037249 Msa0934890:CDS
CCTTATCATCAAGATACCTT+AGG 0.491744 6_3:+5035060 Msa0934890:CDS
ACAAGAGATATGATATCTTC+GGG 0.492269 6_3:+5033833 Msa0934890:CDS
AGCTAAGAAGCTGTGTCAAA+TGG 0.495654 6_3:+5034258 Msa0934890:CDS
ATATGATGAGGAAGCATAAG+AGG 0.497481 6_3:+5033741 Msa0934890:CDS
CAACAAAATAGGCAAGTTCA+AGG 0.497660 6_3:+5034606 Msa0934890:CDS
GGGCCCGGGCGCCCTCCAGA+AGG 0.498016 6_3:+5037218 Msa0934890:CDS
ACAGCAGGTCTTGAAATTCA+AGG 0.502264 6_3:+5034148 Msa0934890:CDS
TGTTCCAAGACTTGTGCTGG+GGG 0.504448 6_3:+5037028 Msa0934890:CDS
GCTTCGGTTGATTGTAGCAT+AGG 0.507105 6_3:+5034448 Msa0934890:CDS
CTTGGACTTAGTGTACTCCT+TGG 0.507878 6_3:-5033344 None:intergenic
AGCGGCTGATCGGAGATTGA+TGG 0.508307 6_3:+5034327 Msa0934890:CDS
GGACTAATCTGTGACTCAAA+AGG 0.508573 6_3:+5034349 Msa0934890:CDS
GGCTCGGGAGCCCTTCTGGA+GGG 0.508720 6_3:-5037229 None:intergenic
GGCTCGGGAGCCCTTCTGGA+GGG 0.508720 6_3:-5037259 None:intergenic
TGTCCCAAGACTCGTGCTTG+GGG 0.509422 6_3:+5037116 Msa0934890:CDS
GAAATGTTGGAATATGTAGT+TGG 0.509887 6_3:+5035514 Msa0934890:CDS
GCCGGAACCTATGATGCAAT+GGG 0.511115 6_3:+5035099 Msa0934890:CDS
ACTTCTCATTTCATAAACAT+TGG 0.511524 6_3:-5033438 None:intergenic
GGTGATGGCGGAAAACCGTC+AGG 0.512150 6_3:+5034414 Msa0934890:CDS
TCCCAAGACTCGTGCTTGGG+GGG 0.512729 6_3:+5037118 Msa0934890:CDS
CGGATTTGTTCGAAGAGGCT+AGG 0.512806 6_3:+5035013 Msa0934890:CDS
GAACGTTCCAAAATCGCCTT+GGG 0.514038 6_3:+5036947 Msa0934890:CDS
ATGAGGAAGCATAAGAGGCT+TGG 0.515392 6_3:+5033746 Msa0934890:CDS
AGGTCTTGAAATTCAAGGGC+AGG 0.519274 6_3:+5034153 Msa0934890:CDS
CCTCTAAGGAGAGGCTCTGA+CGG 0.520224 6_3:+5036408 Msa0934890:CDS
TGCCGGAACCTATGATGCAA+TGG 0.523715 6_3:+5035098 Msa0934890:CDS
GCGGCTGATCGGAGATTGAT+GGG 0.524259 6_3:+5034328 Msa0934890:CDS
CAAAATACTAAAGCGACAAT+CGG 0.530066 6_3:+5036468 Msa0934890:CDS
GGATGATGCCATTGAAATGT+TGG 0.531705 6_3:+5035501 Msa0934890:CDS
GGAACGTTCCAAAATCGCCT+TGG 0.532777 6_3:+5036946 Msa0934890:CDS
GTCCCAAGACTCGTGCTTGG+GGG 0.534656 6_3:+5037117 Msa0934890:CDS
GAAAGGCTCTAAAAGGGCCC+GGG 0.535424 6_3:+5037204 Msa0934890:CDS
TTGTTCCAAGACTTGTGCTG+GGG 0.535637 6_3:+5037027 Msa0934890:CDS
CAGAGCCTCTCCTTAGAGGT+TGG 0.537031 6_3:-5036404 None:intergenic
AAGTGATGATAGCATAGAGC+TGG 0.537238 6_3:-5037088 None:intergenic
GCCGCTTCTTCAAACGATGC+AGG 0.539483 6_3:-5034310 None:intergenic
CCAGCACAAGTCTTGGAACA+AGG 0.540517 6_3:-5037025 None:intergenic
TCAGGAACTAGACGTTGCTT+CGG 0.541301 6_3:+5034432 Msa0934890:CDS
ATGAAACACAAAACTTTACA+AGG 0.544316 6_3:-5032007 None:intergenic
ATATAGCTTTGTTATTTCGA+AGG 0.544446 6_3:-5036974 None:intergenic
GCTGGAATTGAAGCACAAAT+GGG 0.544451 6_3:+5034826 Msa0934890:CDS
GGAACGTTCCGGAGATCCCG+AGG 0.545916 6_3:-5036933 None:intergenic
CCTCCAGAAAGGCTCTAAAA+GGG 0.552447 6_3:+5037198 Msa0934890:CDS
AGGCTCGGGAGCCCTTCTGG+AGG 0.552578 6_3:-5037230 None:intergenic
AGGCTCGGGAGCCCTTCTGG+AGG 0.552578 6_3:-5037260 None:intergenic
CAGCAGGTCTTGAAATTCAA+GGG 0.553020 6_3:+5034149 Msa0934890:CDS
CATGTGCCTCGGCTACATAC+CGG 0.554759 6_3:-5034213 None:intergenic
GGCCCGGGCGCCCTCCAGAA+GGG 0.556366 6_3:+5037219 Msa0934890:CDS
AAGATTGCTATAAACTCCTA+AGG 0.559657 6_3:-5035076 None:intergenic
GTCGCGAAATTTCGTGCTAG+TGG 0.561637 6_3:+5034907 Msa0934890:CDS
CGTTTGAAGAAGCGGCTGAT+CGG 0.567330 6_3:+5034317 Msa0934890:CDS
AAATAACAAAGCTATATGGC+AGG 0.568633 6_3:+5036980 Msa0934890:CDS
AAGAGGCTTGGTTTGAAGGA+CGG 0.569541 6_3:+5033758 Msa0934890:CDS
TTCTGATCAATCACCTTCAA+GGG 0.570336 6_3:+5033460 Msa0934890:CDS
TTTGCATAAGAGGAATGAGA+AGG 0.571407 6_3:+5033691 Msa0934890:CDS
TCGAGCACAAGGACCGGTGA+AGG 0.574152 6_3:+5033638 Msa0934890:CDS
CAATAACTTTCTCAATAGCA+TGG 0.576173 6_3:-5033610 None:intergenic
TGATTTCGATGATCCTTCAC+CGG 0.577571 6_3:-5033651 None:intergenic
GTTTCTTCGAGCACAAGGAC+CGG 0.578106 6_3:+5033632 Msa0934890:CDS
AGCCTTTAGGAATATTATGA+CGG 0.578110 6_3:-5037148 None:intergenic
GGTGACACTTATGCAATGAT+GGG 0.583597 6_3:+5034097 Msa0934890:CDS
CGGCATGTCTCGCCAAATCG+AGG 0.585511 6_3:-5034193 None:intergenic
TTATTGTTTCTTCGAGCACA+AGG 0.588845 6_3:+5033627 Msa0934890:CDS
AGGCTCTATGACCTCCAGAA+AGG 0.590373 6_3:+5037187 Msa0934890:CDS
TCAGGACACAGGTCTACCCT+CGG 0.594324 6_3:+5036916 Msa0934890:intron
GTTTCTCATCATCGACATCA+GGG 0.595343 6_3:-5035567 None:intergenic
AGCTCGTCAACCTTTAAGCA+AGG 0.595503 6_3:+5036350 Msa0934890:CDS
CCTTAAGATGAGCGCGCCAG+AGG 0.597851 6_3:-5037280 None:intergenic
TGGGTCTTGCTTGTGTCCAA+AGG 0.597967 6_3:+5034971 Msa0934890:CDS
CAAGTTGAAGATAGATCCCA+AGG 0.598587 6_3:+5036320 Msa0934890:CDS
TAAAAGAAGCAGGAAGAGCA+AGG 0.602086 6_3:+5035608 Msa0934890:CDS
GCAATAGTACTGTGTTGACC+AGG 0.603485 6_3:-5034805 None:intergenic
TCTCAAATCATGAAAGACAA+TGG 0.605875 6_3:+5035676 Msa0934890:CDS
AGGTTTCTAGAAGCCTAGAA+GGG 0.606971 6_3:-5037308 None:intergenic
CGATGATGAGAAACGTAGGT+TGG 0.613183 6_3:+5035576 Msa0934890:CDS
CAGGACACAGGTCTACCCTC+GGG 0.615056 6_3:+5036917 Msa0934890:intron
TTATTTCGAAGGATTTCCCA+AGG 0.615318 6_3:-5036963 None:intergenic
AATTCAAGGGCAGGTCTTAG+GGG 0.616046 6_3:+5034162 Msa0934890:CDS
GGAATGAGAGAAGAGAAGCT+AGG 0.616908 6_3:+5035535 Msa0934890:CDS
ATGCACTAGCTAAGTTTGCA+GGG 0.620124 6_3:+5034062 Msa0934890:CDS
TCTTGACCATGCTCTAACAC+AGG 0.621585 6_3:-5034037 None:intergenic
GTATGCTATAAATGAAGCTG+CGG 0.621746 6_3:+5034993 Msa0934890:CDS
TTGCATAAGAGGAATGAGAA+GGG 0.622583 6_3:+5033692 Msa0934890:CDS
AAAACTTGATGACCTCCTGA+AGG 0.625881 6_3:+5037064 Msa0934890:CDS
AAATTGTTGCCAATACATGA+AGG 0.635151 6_3:-5033955 None:intergenic
TTCGGGTGAGAATCCGAACA+AGG 0.636497 6_3:+5033850 Msa0934890:CDS
CTTTAAGCAAGGCTCTGACA+GGG 0.641281 6_3:+5036361 Msa0934890:CDS
GTTCCAAGACTTGTGCTGGG+GGG 0.645281 6_3:+5037029 Msa0934890:CDS
AATGGCTCTTGATATTCACA+AGG 0.649667 6_3:+5034276 Msa0934890:CDS
GAACCTATGATGCAATGGGA+AGG 0.652944 6_3:+5035103 Msa0934890:CDS
AGCTGCGGATTTGTTCGAAG+AGG 0.656437 6_3:+5035008 Msa0934890:CDS
GAACGTTCCGGAGATCCCGA+GGG 0.656884 6_3:-5036932 None:intergenic
CATAGAGCTGGACCTTCAGG+AGG 0.658759 6_3:-5037076 None:intergenic
GATGTTCCTGTGTTAGAGCA+TGG 0.659119 6_3:+5034031 Msa0934890:CDS
AAGCAACGTCTAGTTCCTGA+CGG 0.661536 6_3:-5034429 None:intergenic
TGTCTCGCCAAATCGAGGAT+CGG 0.662785 6_3:-5034188 None:intergenic
CAGTGCTTGAACATGTGCCT+CGG 0.663577 6_3:-5034224 None:intergenic
AAACACCAACCTCTAAGGAG+AGG 0.673612 6_3:+5036399 Msa0934890:CDS
ATGGCTCTTGATATTCACAA+GGG 0.677786 6_3:+5034277 Msa0934890:CDS
TTTGGCAAGCGTGGTGATGG+CGG 0.680737 6_3:+5034402 Msa0934890:CDS
CTGCTCAACAAGCATCACCA+AGG 0.705437 6_3:+5033327 Msa0934890:CDS
TTTCTAGAAGCCTAGAAGGG+CGG 0.705830 6_3:-5037305 None:intergenic
TCTAAGGAGAGGCTCTGACG+GGG 0.706790 6_3:+5036410 Msa0934890:CDS
TAATTTAGGACAGTACAATG+AGG 0.731698 6_3:+5033982 Msa0934890:CDS
ATGTCGATGATGAGAAACGT+AGG 0.760306 6_3:+5035572 Msa0934890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTCATAATAAACTT+AGG - chr6_3:5032803-5032822 None:intergenic 10.0%
!! ATAAATATAAAATAATGCAT+TGG - chr6_3:5035240-5035259 None:intergenic 10.0%
!! AAAAATTTCGAAATCAAAAT+TGG + chr6_3:5032815-5032834 Msa0934890:intron 15.0%
!!! AGTCAAATTGTTTTTATATA+TGG - chr6_3:5033101-5033120 None:intergenic 15.0%
!! TGTATAATTGAATGTATAAA+TGG + chr6_3:5035825-5035844 Msa0934890:intron 15.0%
!! TACAAGGTTGTTTATAATTT+GGG - chr6_3:5031994-5032013 None:intergenic 20.0%
!! TTACAAGGTTGTTTATAATT+TGG - chr6_3:5031995-5032014 None:intergenic 20.0%
!! TTAAACAAACATTGAATGTA+TGG + chr6_3:5032868-5032887 Msa0934890:intron 20.0%
!!! AAAACTTTGAAATTCTTCTA+AGG - chr6_3:5033161-5033180 None:intergenic 20.0%
!! TTTGAATTATGTAATGAAGA+TGG + chr6_3:5033905-5033924 Msa0934890:CDS 20.0%
!! TAAAATGTAAGGAGATTTAA+GGG - chr6_3:5035144-5035163 None:intergenic 20.0%
!! ATAAAATGTAAGGAGATTTA+AGG - chr6_3:5035145-5035164 None:intergenic 20.0%
!!! TTGTAATATGTTATTTGACA+TGG - chr6_3:5035264-5035283 None:intergenic 20.0%
!!! AATTATAATAATTTGCAGAG+TGG + chr6_3:5035480-5035499 Msa0934890:intron 20.0%
!!! TCAATATTTTTCCTTGTTTA+AGG + chr6_3:5035764-5035783 Msa0934890:intron 20.0%
! ATGAAACACAAAACTTTACA+AGG - chr6_3:5032010-5032029 None:intergenic 25.0%
!!! AAGTTTTGTGTTTCATTCTT+TGG + chr6_3:5032014-5032033 Msa0934890:five_prime_UTR 25.0%
!! ATTCTTTGGAGAATACTAAA+AGG + chr6_3:5032028-5032047 Msa0934890:five_prime_UTR 25.0%
!!! TTGATCATGGTTTTAAATTG+TGG + chr6_3:5032212-5032231 Msa0934890:intron 25.0%
!!! TACAATTTGCTGCAATAAAA+AGG + chr6_3:5032301-5032320 Msa0934890:intron 25.0%
!!! GTTTTTTAGTGTTGTGTAAT+AGG + chr6_3:5032404-5032423 Msa0934890:intron 25.0%
!!! AGTTTTGACTTTTATGTTTG+AGG + chr6_3:5032643-5032662 Msa0934890:intron 25.0%
!! TCAATTGATTTAGCTATTGA+TGG + chr6_3:5033383-5033402 Msa0934890:CDS 25.0%
! ACTTCTCATTTCATAAACAT+TGG - chr6_3:5033441-5033460 None:intergenic 25.0%
!! ATGGTTTTTACAATATGATG+AGG + chr6_3:5033729-5033748 Msa0934890:CDS 25.0%
! AACAAGAGATATGATATCTT+CGG + chr6_3:5033832-5033851 Msa0934890:CDS 25.0%
! GCAACAATTTACTGTAATTT+AGG + chr6_3:5033968-5033987 Msa0934890:CDS 25.0%
! ATCCATGAATGATATAGAAA+AGG + chr6_3:5034738-5034757 Msa0934890:CDS 25.0%
! TCCATGAATGATATAGAAAA+GGG + chr6_3:5034739-5034758 Msa0934890:CDS 25.0%
! GGAGTTATGTATTATATGTT+AGG + chr6_3:5034847-5034866 Msa0934890:CDS 25.0%
!!! ACTATTTTGGAAAAAGAGTA+TGG + chr6_3:5035036-5035055 Msa0934890:CDS 25.0%
! GATCAGAACAATAAAATGTA+AGG - chr6_3:5035155-5035174 None:intergenic 25.0%
! ATGTGCAGTTTAGATTATAT+CGG + chr6_3:5035199-5035218 Msa0934890:intron 25.0%
!! AATAATGCATTGGTAAAACA+CGG - chr6_3:5035230-5035249 None:intergenic 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr6_3:5035429-5035448 Msa0934890:intron 25.0%
! AATAAATGTTAGCAATGAGT+TGG - chr6_3:5035457-5035476 None:intergenic 25.0%
! TACATATTCCAACATTTCAA+TGG - chr6_3:5035512-5035531 None:intergenic 25.0%
! ATTAAAGTTCTATGAATCTG+AGG + chr6_3:5035700-5035719 Msa0934890:intron 25.0%
! ACAAGGAAAAATATTGAAAG+TGG - chr6_3:5035761-5035780 None:intergenic 25.0%
!! GAATTTTCCAATATGTGTTT+TGG - chr6_3:5035926-5035945 None:intergenic 25.0%
!!! TTGCTTATTTGTTATAGTCA+AGG + chr6_3:5035948-5035967 Msa0934890:intron 25.0%
! AAAGTAACAGCTCAAAATAT+TGG + chr6_3:5036561-5036580 Msa0934890:intron 25.0%
!!! ATATAGCTTTGTTATTTCGA+AGG - chr6_3:5036977-5036996 None:intergenic 25.0%
! TTCGAAATAACAAAGCTATA+TGG + chr6_3:5036976-5036995 Msa0934890:CDS 25.0%
ATTTGGGTATGTGTTATGTT+AGG - chr6_3:5031978-5031997 None:intergenic 30.0%
! GTTTTCAATGAGTTTGATCA+TGG + chr6_3:5032199-5032218 Msa0934890:intron 30.0%
! CAGTATTATAACCGCAATTT+TGG + chr6_3:5032268-5032287 Msa0934890:intron 30.0%
GCAGCAAATTGTAAAAAATG+CGG - chr6_3:5032294-5032313 None:intergenic 30.0%
AAAAAGCAAATTATTCCACC+TGG - chr6_3:5032470-5032489 None:intergenic 30.0%
! TGTTTCTGTAGAGTGAAATT+TGG + chr6_3:5032668-5032687 Msa0934890:intron 30.0%
TAATAAACTTAGGCTCTGTT+TGG - chr6_3:5032793-5032812 None:intergenic 30.0%
! TTTCCTATTTAGAGCTTGTT+TGG + chr6_3:5032928-5032947 Msa0934890:intron 30.0%
!! AATCCAAACAAGCTCTAAAT+AGG - chr6_3:5032934-5032953 None:intergenic 30.0%
! TATTTAGAGCTTGTTTGGAT+TGG + chr6_3:5032933-5032952 Msa0934890:intron 30.0%
!! TCATGTCCATAAGTTGTTTT+CGG + chr6_3:5033029-5033048 Msa0934890:intron 30.0%
AATAAGCCGAAAACAACTTA+TGG - chr6_3:5033038-5033057 None:intergenic 30.0%
!! GCTTATTTCTATAAACTCTC+CGG + chr6_3:5033051-5033070 Msa0934890:intron 30.0%
!! GTTGTTTTCATAAGCTATTC+CGG - chr6_3:5033073-5033092 None:intergenic 30.0%
TCAAGGAAACAGTAAAAAGA+AGG - chr6_3:5033188-5033207 None:intergenic 30.0%
! CTGTTTCCTTGATCAATTTT+AGG + chr6_3:5033196-5033215 Msa0934890:intron 30.0%
AATTCTTCCATAGTTATTGC+AGG - chr6_3:5033245-5033264 None:intergenic 30.0%
GAATCACTTTGAATACTTCT+TGG - chr6_3:5033365-5033384 None:intergenic 30.0%
! ATCAAGGATTGATTCAGAAT+TGG + chr6_3:5033508-5033527 Msa0934890:CDS 30.0%
! TCAAGGATTGATTCAGAATT+GGG + chr6_3:5033509-5033528 Msa0934890:CDS 30.0%
! TGTTGGATATATTGGTGATT+TGG + chr6_3:5033538-5033557 Msa0934890:CDS 30.0%
CAATAACTTTCTCAATAGCA+TGG - chr6_3:5033613-5033632 None:intergenic 30.0%
AAAGTAGAAGTTTGCATAAG+AGG + chr6_3:5033681-5033700 Msa0934890:CDS 30.0%
CTTGTTACCTTTAACAAGAA+TGG - chr6_3:5033818-5033837 None:intergenic 30.0%
ACAAGAGATATGATATCTTC+GGG + chr6_3:5033833-5033852 Msa0934890:CDS 30.0%
AAATTGTTGCCAATACATGA+AGG - chr6_3:5033958-5033977 None:intergenic 30.0%
! TAATTTAGGACAGTACAATG+AGG + chr6_3:5033982-5034001 Msa0934890:CDS 30.0%
!!! TGCTTTAGAGCATTATGTTT+TGG + chr6_3:5034384-5034403 Msa0934890:CDS 30.0%
! ACAGTTTTCAAATCAACCAA+AGG + chr6_3:5034532-5034551 Msa0934890:CDS 30.0%
GCTGATCTATACAACAAAAT+AGG + chr6_3:5034595-5034614 Msa0934890:CDS 30.0%
! ACCCTTTTCTATATCATTCA+TGG - chr6_3:5034743-5034762 None:intergenic 30.0%
AAGATATACAACAATGTTCC+TGG + chr6_3:5034787-5034806 Msa0934890:CDS 30.0%
CTTCATTTATAGCATACCTT+TGG - chr6_3:5034990-5035009 None:intergenic 30.0%
AAGATTGCTATAAACTCCTA+AGG - chr6_3:5035079-5035098 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG - chr6_3:5035425-5035444 None:intergenic 30.0%
GAAATGTTGGAATATGTAGT+TGG + chr6_3:5035514-5035533 Msa0934890:CDS 30.0%
CAGGAAATCAAAAAGATCAT+TGG + chr6_3:5035633-5035652 Msa0934890:CDS 30.0%
TCTCAAATCATGAAAGACAA+TGG + chr6_3:5035676-5035695 Msa0934890:CDS 30.0%
TATGTGAACATCCTTAAACA+AGG - chr6_3:5035778-5035797 None:intergenic 30.0%
TGAAACTTCACTTTCTATGA+TGG + chr6_3:5035890-5035909 Msa0934890:intron 30.0%
AAATAGTCAACCTTTAAGCA+AGG + chr6_3:5036185-5036204 Msa0934890:intron 30.0%
AAAAAGTCAACCTTTAAGCA+AGG + chr6_3:5036291-5036310 Msa0934890:CDS 30.0%
CAAAATACTAAAGCGACAAT+CGG + chr6_3:5036468-5036487 Msa0934890:CDS 30.0%
TCAAGCACATAATAAGTGTT+CGG + chr6_3:5036594-5036613 Msa0934890:intron 30.0%
AAATAACAAAGCTATATGGC+AGG + chr6_3:5036980-5036999 Msa0934890:CDS 30.0%
AACCGTCATAATATTCCTAA+AGG + chr6_3:5037146-5037165 Msa0934890:CDS 30.0%
! AGCCTTTAGGAATATTATGA+CGG - chr6_3:5037151-5037170 None:intergenic 30.0%
CATAATATTCCTAAAGGCTT+AGG + chr6_3:5037152-5037171 Msa0934890:CDS 30.0%
TTGCGGTTATAATACTGTTG+CGG - chr6_3:5032265-5032284 None:intergenic 35.0%
AAAAAATGCGGCCAAAATTG+CGG - chr6_3:5032282-5032301 None:intergenic 35.0%
!!! AAACTCATGGTTTTAAACCG+TGG - chr6_3:5032351-5032370 None:intergenic 35.0%
AGTTTGATCACTGACAGAAA+TGG + chr6_3:5032366-5032385 Msa0934890:intron 35.0%
GACATGTTCATAAGCTCTTT+AGG + chr6_3:5032721-5032740 Msa0934890:intron 35.0%
AACTGTTTGAGAGAGCTTAT+AGG + chr6_3:5032994-5033013 Msa0934890:intron 35.0%
CAGTCACCTAAAATTGATCA+AGG - chr6_3:5033205-5033224 None:intergenic 35.0%
TTCAATGCCTGCAATAACTA+TGG + chr6_3:5033235-5033254 Msa0934890:exon 35.0%
TGAAAGCTATACACCTCATA+AGG + chr6_3:5033295-5033314 Msa0934890:CDS 35.0%
GCAGTAAAGTTATCCTTATG+AGG - chr6_3:5033311-5033330 None:intergenic 35.0%
TTCTGATCAATCACCTTCAA+GGG + chr6_3:5033460-5033479 Msa0934890:CDS 35.0%
!!! AGGGCTAGTTTTTACTCATA+TGG + chr6_3:5033479-5033498 Msa0934890:CDS 35.0%
GGTCATCTTGTTGGATATAT+TGG + chr6_3:5033530-5033549 Msa0934890:CDS 35.0%
! TTATTGTTTCTTCGAGCACA+AGG + chr6_3:5033627-5033646 Msa0934890:CDS 35.0%
TTTGCATAAGAGGAATGAGA+AGG + chr6_3:5033691-5033710 Msa0934890:CDS 35.0%
TTGCATAAGAGGAATGAGAA+GGG + chr6_3:5033692-5033711 Msa0934890:CDS 35.0%
AATGAGAAGGGAACTAGAAA+AGG + chr6_3:5033704-5033723 Msa0934890:CDS 35.0%
AAGGGAACTAGAAAAGGAAA+TGG + chr6_3:5033710-5033729 Msa0934890:CDS 35.0%
! ATATGATGAGGAAGCATAAG+AGG + chr6_3:5033741-5033760 Msa0934890:CDS 35.0%
GAGTTAGATAATCCTGATCT+TGG + chr6_3:5033791-5033810 Msa0934890:CDS 35.0%
TCTTGGACCATTCTTGTTAA+AGG + chr6_3:5033808-5033827 Msa0934890:CDS 35.0%
!! CCAAAATTAAGAGCCTTGTT+CGG - chr6_3:5033866-5033885 None:intergenic 35.0%
TGAAGATGGTAAACCAAGTT+TGG + chr6_3:5033919-5033938 Msa0934890:CDS 35.0%
! TGGTAAACCAAGTTTGGAAT+TGG + chr6_3:5033925-5033944 Msa0934890:CDS 35.0%
! TCTCTACTGTTTTATACAGC+AGG + chr6_3:5034133-5034152 Msa0934890:CDS 35.0%
AATGGCTCTTGATATTCACA+AGG + chr6_3:5034276-5034295 Msa0934890:CDS 35.0%
ATGGCTCTTGATATTCACAA+GGG + chr6_3:5034277-5034296 Msa0934890:CDS 35.0%
CTTGATATTCACAAGGGAAA+CGG + chr6_3:5034283-5034302 Msa0934890:CDS 35.0%
AGGCGATGCTTATTTATCAT+TGG + chr6_3:5034468-5034487 Msa0934890:CDS 35.0%
ACAAAAACAGAAGCAACTGT+TGG - chr6_3:5034568-5034587 None:intergenic 35.0%
!!! CAGTTGCTTCTGTTTTTGTA+AGG + chr6_3:5034569-5034588 Msa0934890:CDS 35.0%
CAACAAAATAGGCAAGTTCA+AGG + chr6_3:5034606-5034625 Msa0934890:CDS 35.0%
!! ATTTTCGGGAAGAAAAAACC+CGG + chr6_3:5034661-5034680 Msa0934890:CDS 35.0%
! AATCTCTTCTAGAGAGATTC+CGG - chr6_3:5034683-5034702 None:intergenic 35.0%
! TCTCTAGAAGAGATTGCAAA+TGG + chr6_3:5034688-5034707 Msa0934890:CDS 35.0%
!! GAGAAAAAATCGGCTTTGTT+TGG + chr6_3:5034931-5034950 Msa0934890:CDS 35.0%
TGGAATTGCATTGAACCAAA+TGG + chr6_3:5034951-5034970 Msa0934890:CDS 35.0%
GGAATTGCATTGAACCAAAT+GGG + chr6_3:5034952-5034971 Msa0934890:CDS 35.0%
GTATGCTATAAATGAAGCTG+CGG + chr6_3:5034993-5035012 Msa0934890:CDS 35.0%
! CCTAAGGTATCTTGATGATA+AGG - chr6_3:5035063-5035082 None:intergenic 35.0%
CCTTATCATCAAGATACCTT+AGG + chr6_3:5035060-5035079 Msa0934890:CDS 35.0%
ATCTCGACATAGTACTATCT+CGG + chr6_3:5035172-5035191 Msa0934890:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr6_3:5035445-5035464 None:intergenic 35.0%
! TCCTGCTTCTTTTAACAACT+CGG - chr6_3:5035602-5035621 None:intergenic 35.0%
GTCTTTCATGATTTGAGAGT+TGG - chr6_3:5035674-5035693 None:intergenic 35.0%
TGCTACACCAAAACACATAT+TGG + chr6_3:5035916-5035935 Msa0934890:intron 35.0%
GTATTGTCAACCTTTAAGCA+AGG + chr6_3:5036079-5036098 Msa0934890:intron 35.0%
AAAGGTTGACTATTTCGACT+TGG - chr6_3:5036180-5036199 None:intergenic 35.0%
!!! AAAGGTTGACTTTTTCGACT+TGG - chr6_3:5036286-5036305 None:intergenic 35.0%
!!! CGATTGTCGCTTTAGTATTT+TGG - chr6_3:5036470-5036489 None:intergenic 35.0%
CACATAATAAGTGTTCGGAA+AGG + chr6_3:5036599-5036618 Msa0934890:intron 35.0%
!!! AATGTTTTAACATTCCCCGA+GGG - chr6_3:5036873-5036892 None:intergenic 35.0%
!!! AAATGTTTTAACATTCCCCG+AGG - chr6_3:5036874-5036893 None:intergenic 35.0%
TTATTTCGAAGGATTTCCCA+AGG - chr6_3:5036966-5036985 None:intergenic 35.0%
TCTGTCAGTGATCAAACTCA+TGG - chr6_3:5032364-5032383 None:intergenic 40.0%
CTATGTCAAGCAATCAAACC+AGG + chr6_3:5032449-5032468 Msa0934890:intron 40.0%
! TGTAGAGTGAAATTTGGCTC+TGG + chr6_3:5032674-5032693 Msa0934890:intron 40.0%
!! AATTCTTCTAAGGCACTGTC+TGG - chr6_3:5033151-5033170 None:intergenic 40.0%
GTTCTGATCAATCACCTTCA+AGG + chr6_3:5033459-5033478 Msa0934890:CDS 40.0%
GAGTAAAAACTAGCCCTTGA+AGG - chr6_3:5033476-5033495 None:intergenic 40.0%
ACTCATATGGCGAAGAATCA+AGG + chr6_3:5033492-5033511 Msa0934890:CDS 40.0%
TCAGAATTGGGTCATCTTGT+TGG + chr6_3:5033521-5033540 Msa0934890:CDS 40.0%
TGATTTCGATGATCCTTCAC+CGG - chr6_3:5033654-5033673 None:intergenic 40.0%
AACAAGAATGGTCCAAGATC+AGG - chr6_3:5033806-5033825 None:intergenic 40.0%
! CCGAACAAGGCTCTTAATTT+TGG + chr6_3:5033863-5033882 Msa0934890:CDS 40.0%
CACATCACCAATTCCAAACT+TGG - chr6_3:5033935-5033954 None:intergenic 40.0%
TCAATTGAACGCTCGAGAAT+CGG - chr6_3:5034013-5034032 None:intergenic 40.0%
ATGCACTAGCTAAGTTTGCA+GGG + chr6_3:5034062-5034081 Msa0934890:CDS 40.0%
TTTGCAGGGTGTATGCAATT+AGG + chr6_3:5034076-5034095 Msa0934890:CDS 40.0%
AGGTGACACTTATGCAATGA+TGG + chr6_3:5034096-5034115 Msa0934890:CDS 40.0%
GGTGACACTTATGCAATGAT+GGG + chr6_3:5034097-5034116 Msa0934890:CDS 40.0%
ACAGCAGGTCTTGAAATTCA+AGG + chr6_3:5034148-5034167 Msa0934890:CDS 40.0%
CAGCAGGTCTTGAAATTCAA+GGG + chr6_3:5034149-5034168 Msa0934890:CDS 40.0%
AAATTCAAGGGCAGGTCTTA+GGG + chr6_3:5034161-5034180 Msa0934890:CDS 40.0%
AGCTAAGAAGCTGTGTCAAA+TGG + chr6_3:5034258-5034277 Msa0934890:CDS 40.0%
GGACTAATCTGTGACTCAAA+AGG + chr6_3:5034349-5034368 Msa0934890:CDS 40.0%
TGTTGGATGATTCTCTCCTT+TGG - chr6_3:5034551-5034570 None:intergenic 40.0%
! ATCTCTTCTAGAGAGATTCC+GGG - chr6_3:5034682-5034701 None:intergenic 40.0%
TGCTGGAATTGAAGCACAAA+TGG + chr6_3:5034825-5034844 Msa0934890:CDS 40.0%
GCTGGAATTGAAGCACAAAT+GGG + chr6_3:5034826-5034845 Msa0934890:CDS 40.0%
TGCTAGTGGCGAGAAAAAAT+CGG + chr6_3:5034921-5034940 Msa0934890:CDS 40.0%
GGAGTTTATAGCAATCTTGC+CGG + chr6_3:5035081-5035100 Msa0934890:CDS 40.0%
TTACCTTCCCATTGCATCAT+AGG - chr6_3:5035109-5035128 None:intergenic 40.0%
CAAGCATTATCCCACTAAGT+GGG + chr6_3:5035375-5035394 Msa0934890:intron 40.0%
AAGCATTATCCCACTAAGTG+GGG + chr6_3:5035376-5035395 Msa0934890:intron 40.0%
GGATGATGCCATTGAAATGT+TGG + chr6_3:5035501-5035520 Msa0934890:CDS 40.0%
GTTTCTCATCATCGACATCA+GGG - chr6_3:5035570-5035589 None:intergenic 40.0%
ATGTCGATGATGAGAAACGT+AGG + chr6_3:5035572-5035591 Msa0934890:CDS 40.0%
TAAAAGAAGCAGGAAGAGCA+AGG + chr6_3:5035608-5035627 Msa0934890:CDS 40.0%
! CAAGTTGAAGATAGATCCCA+AGG + chr6_3:5036320-5036339 Msa0934890:CDS 40.0%
!!! GAGGTTGGTGTTTTTCGATT+TGG - chr6_3:5036392-5036411 None:intergenic 40.0%
TCGAAAAACACCAACCTCTA+AGG + chr6_3:5036394-5036413 Msa0934890:CDS 40.0%
!!! TATTTTGGCGCCTAATTTGC+GGG - chr6_3:5036455-5036474 None:intergenic 40.0%
!!! GTATTTTGGCGCCTAATTTG+CGG - chr6_3:5036456-5036475 None:intergenic 40.0%
GTATTTCCACTACTTGTCGA+TGG - chr6_3:5036658-5036677 None:intergenic 40.0%
! CGACAAGTAGTGGAAATACA+AGG + chr6_3:5036659-5036678 Msa0934890:intron 40.0%
ACAAGGAGTTTGTAGCTACA+CGG + chr6_3:5036676-5036695 Msa0934890:intron 40.0%
! TCGTGTGCTTCTTTTCGTTT+GGG - chr6_3:5036722-5036741 None:intergenic 40.0%
! TTCGTGTGCTTCTTTTCGTT+TGG - chr6_3:5036723-5036742 None:intergenic 40.0%
ATAGCAATGCTCCAAAGTTC+AGG + chr6_3:5036898-5036917 Msa0934890:intron 40.0%
! TCAGGAGGTCATCAAGTTTT+GGG - chr6_3:5037064-5037083 None:intergenic 40.0%
! TTCAGGAGGTCATCAAGTTT+TGG - chr6_3:5037065-5037084 None:intergenic 40.0%
! AAAACTTGATGACCTCCTGA+AGG + chr6_3:5037064-5037083 Msa0934890:CDS 40.0%
AAGTGATGATAGCATAGAGC+TGG - chr6_3:5037091-5037110 None:intergenic 40.0%
! GGTCATAGAGCCTTTTTGAA+GGG - chr6_3:5037180-5037199 None:intergenic 40.0%
! AGGTCATAGAGCCTTTTTGA+AGG - chr6_3:5037181-5037200 None:intergenic 40.0%
TGTCAAGCAATCAAACCAGG+TGG + chr6_3:5032452-5032471 Msa0934890:intron 45.0%
CTTGGACTTAGTGTACTCCT+TGG - chr6_3:5033347-5033366 None:intergenic 45.0%
! ATGAGGAAGCATAAGAGGCT+TGG + chr6_3:5033746-5033765 Msa0934890:CDS 45.0%
! GCATAAGAGGCTTGGTTTGA+AGG + chr6_3:5033754-5033773 Msa0934890:CDS 45.0%
! AAGAGGCTTGGTTTGAAGGA+CGG + chr6_3:5033758-5033777 Msa0934890:CDS 45.0%
GGTGATGTGCCTTCATGTAT+TGG + chr6_3:5033946-5033965 Msa0934890:CDS 45.0%
GATGTTCCTGTGTTAGAGCA+TGG + chr6_3:5034031-5034050 Msa0934890:CDS 45.0%
TCTTGACCATGCTCTAACAC+AGG - chr6_3:5034040-5034059 None:intergenic 45.0%
CATGCACTAGCTAAGTTTGC+AGG + chr6_3:5034061-5034080 Msa0934890:CDS 45.0%
AGGTCTTGAAATTCAAGGGC+AGG + chr6_3:5034153-5034172 Msa0934890:CDS 45.0%
GAAATTCAAGGGCAGGTCTT+AGG + chr6_3:5034160-5034179 Msa0934890:CDS 45.0%
AATTCAAGGGCAGGTCTTAG+GGG + chr6_3:5034162-5034181 Msa0934890:CDS 45.0%
!!! GCATTATGTTTTGGCAAGCG+TGG + chr6_3:5034393-5034412 Msa0934890:CDS 45.0%
! AAGCAACGTCTAGTTCCTGA+CGG - chr6_3:5034432-5034451 None:intergenic 45.0%
TCAGGAACTAGACGTTGCTT+CGG + chr6_3:5034432-5034451 Msa0934890:CDS 45.0%
GCTTCGGTTGATTGTAGCAT+AGG + chr6_3:5034448-5034467 Msa0934890:CDS 45.0%
CTTACTGTGAAAACGCGCTT+CGG + chr6_3:5034638-5034657 Msa0934890:CDS 45.0%
! GAAAACGCGCTTCGGATTTT+CGG + chr6_3:5034646-5034665 Msa0934890:CDS 45.0%
! AAAACGCGCTTCGGATTTTC+GGG + chr6_3:5034647-5034666 Msa0934890:CDS 45.0%
! GCAATAGTACTGTGTTGACC+AGG - chr6_3:5034808-5034827 None:intergenic 45.0%
GGTCAACACAGTACTATTGC+TGG + chr6_3:5034808-5034827 Msa0934890:CDS 45.0%
! CGAAGAGGCTAGGACTATTT+TGG + chr6_3:5035023-5035042 Msa0934890:CDS 45.0%
TCCCATTGCATCATAGGTTC+CGG - chr6_3:5035103-5035122 None:intergenic 45.0%
GAACCTATGATGCAATGGGA+AGG + chr6_3:5035103-5035122 Msa0934890:CDS 45.0%
CCACTTAGTGGGATAATGCT+TGG - chr6_3:5035377-5035396 None:intergenic 45.0%
CCAAGCATTATCCCACTAAG+TGG + chr6_3:5035374-5035393 Msa0934890:intron 45.0%
ATTATCCCACTAAGTGGGGT+CGG + chr6_3:5035380-5035399 Msa0934890:intron 45.0%
GGAATGAGAGAAGAGAAGCT+AGG + chr6_3:5035535-5035554 Msa0934890:CDS 45.0%
CGTTTCTCATCATCGACATC+AGG - chr6_3:5035571-5035590 None:intergenic 45.0%
CGATGATGAGAAACGTAGGT+TGG + chr6_3:5035576-5035595 Msa0934890:CDS 45.0%
GCCGAGTTGTTAAAAGAAGC+AGG + chr6_3:5035598-5035617 Msa0934890:CDS 45.0%
CTTGTCAGAGCCTTGCTTAA+AGG - chr6_3:5036092-5036111 None:intergenic 45.0%
AGCCTTGCTTAAAGGTTGAC+GGG - chr6_3:5036084-5036103 None:intergenic 45.0%
GAGCCTTGCTTAAAGGTTGA+CGG - chr6_3:5036085-5036104 None:intergenic 45.0%
! CTTTAAGCAAGGCTCTGACA+GGG + chr6_3:5036090-5036109 Msa0934890:intron 45.0%
CTTGTCAGAGCCTTGCTTAA+AGG - chr6_3:5036092-5036111 None:intergenic 45.0%
AGCCTTGCTTAAAGGTTGAC+GGG - chr6_3:5036084-5036103 None:intergenic 45.0%
GAGCCTTGCTTAAAGGTTGA+CGG - chr6_3:5036085-5036104 None:intergenic 45.0%
! CTTTAAGCAAGGCTCTGACA+GGG + chr6_3:5036090-5036109 Msa0934890:intron 45.0%
CTTGTCAGAGCCTTGCTTAA+AGG - chr6_3:5036092-5036111 None:intergenic 45.0%
AGCTCGTCAACCTTTAAGCA+AGG + chr6_3:5036350-5036369 Msa0934890:CDS 45.0%
! CTTTAAGCAAGGCTCTGACA+GGG + chr6_3:5036090-5036109 Msa0934890:intron 45.0%
! AAACACCAACCTCTAAGGAG+AGG + chr6_3:5036399-5036418 Msa0934890:CDS 45.0%
! ATTTGCGGGCGATGTTGATT+TGG - chr6_3:5036441-5036460 None:intergenic 45.0%
ATCAACATCGCCCGCAAATT+AGG + chr6_3:5036442-5036461 Msa0934890:CDS 45.0%
GATGGCCGTCATGTTAACTT+CGG - chr6_3:5036640-5036659 None:intergenic 45.0%
TCGTTTGGGCGGGTATATTA+GGG - chr6_3:5036708-5036727 None:intergenic 45.0%
TTCGTTTGGGCGGGTATATT+AGG - chr6_3:5036709-5036728 None:intergenic 45.0%
! TGTGCTTCTTTTCGTTTGGG+CGG - chr6_3:5036719-5036738 None:intergenic 45.0%
CTTGGGCATGTTTCGTTCAA+AGG - chr6_3:5036764-5036783 None:intergenic 45.0%
TTGTGACCTATGGCTGTCTT+GGG - chr6_3:5036781-5036800 None:intergenic 45.0%
TTTGTGACCTATGGCTGTCT+TGG - chr6_3:5036782-5036801 None:intergenic 45.0%
TGTATGTATTCGCGGTCTAC+TGG - chr6_3:5036850-5036869 None:intergenic 45.0%
TAGACCTGTGTCCTGAACTT+TGG - chr6_3:5036912-5036931 None:intergenic 45.0%
!!! AAGGCGATTTTGGAACGTTC+CGG - chr6_3:5036947-5036966 None:intergenic 45.0%
GAACGTTCCAAAATCGCCTT+GGG + chr6_3:5036947-5036966 Msa0934890:CDS 45.0%
! AGGATTTCCCAAGGCGATTT+TGG - chr6_3:5036957-5036976 None:intergenic 45.0%
CTTGTTCCAAGACTTGTGCT+GGG + chr6_3:5037026-5037045 Msa0934890:CDS 45.0%
TTGTTCCAAGACTTGTGCTG+GGG + chr6_3:5037027-5037046 Msa0934890:CDS 45.0%
!! ACCTCCAGAAAGGCTCTAAA+AGG + chr6_3:5037197-5037216 Msa0934890:CDS 45.0%
!! CCTCCAGAAAGGCTCTAAAA+GGG + chr6_3:5037198-5037217 Msa0934890:CDS 45.0%
TTGCAGTGTAACCGCAATCG+CGG + chr6_3:5032325-5032344 Msa0934890:intron 50.0%
CTGCTCAACAAGCATCACCA+AGG + chr6_3:5033327-5033346 Msa0934890:CDS 50.0%
GTTTCTTCGAGCACAAGGAC+CGG + chr6_3:5033632-5033651 Msa0934890:CDS 50.0%
TTCGGGTGAGAATCCGAACA+AGG + chr6_3:5033850-5033869 Msa0934890:CDS 50.0%
TGTCTCGCCAAATCGAGGAT+CGG - chr6_3:5034191-5034210 None:intergenic 50.0%
CAGTGCTTGAACATGTGCCT+CGG - chr6_3:5034227-5034246 None:intergenic 50.0%
GCCTGCATCGTTTGAAGAAG+CGG + chr6_3:5034309-5034328 Msa0934890:CDS 50.0%
CGTTTGAAGAAGCGGCTGAT+CGG + chr6_3:5034317-5034336 Msa0934890:CDS 50.0%
!!! TGTTTTGGCAAGCGTGGTGA+TGG + chr6_3:5034399-5034418 Msa0934890:CDS 50.0%
GTCGCGAAATTTCGTGCTAG+TGG + chr6_3:5034907-5034926 Msa0934890:CDS 50.0%
GGACACAAGCAAGACCCATT+TGG - chr6_3:5034969-5034988 None:intergenic 50.0%
TGGGTCTTGCTTGTGTCCAA+AGG + chr6_3:5034971-5034990 Msa0934890:CDS 50.0%
! AGCTGCGGATTTGTTCGAAG+AGG + chr6_3:5035008-5035027 Msa0934890:CDS 50.0%
! CGGATTTGTTCGAAGAGGCT+AGG + chr6_3:5035013-5035032 Msa0934890:CDS 50.0%
TGCCGGAACCTATGATGCAA+TGG + chr6_3:5035098-5035117 Msa0934890:CDS 50.0%
GCCGGAACCTATGATGCAAT+GGG + chr6_3:5035099-5035118 Msa0934890:CDS 50.0%
AAGCAGGAAGAGCAAGGAAC+AGG + chr6_3:5035614-5035633 Msa0934890:CDS 50.0%
! GGCTCTGACAAGTTGAAGAG+AGG + chr6_3:5036100-5036119 Msa0934890:intron 50.0%
! CAAGTTGAAGAGAGGTCCCA+AGG + chr6_3:5036108-5036127 Msa0934890:intron 50.0%
AGCCCGTCAACCTTTAAGCA+AGG + chr6_3:5036138-5036157 Msa0934890:intron 50.0%
CCTGTCAGAGCCTTGCTTAA+AGG - chr6_3:5036151-5036170 None:intergenic 50.0%
! CCTTTAAGCAAGGCTCTGAC+AGG + chr6_3:5036089-5036108 Msa0934890:intron 50.0%
! GGCTCTGACAAGTTGAAGAG+AGG + chr6_3:5036100-5036119 Msa0934890:intron 50.0%
! CAAGTTGAAGAGAGGTCCCA+AGG + chr6_3:5036108-5036127 Msa0934890:intron 50.0%
AGCCCGTCAACCTTTAAGCA+AGG + chr6_3:5036138-5036157 Msa0934890:intron 50.0%
CCTGTCAGAGCCTTGCTTAA+AGG - chr6_3:5036151-5036170 None:intergenic 50.0%
! CCTTTAAGCAAGGCTCTGAC+AGG + chr6_3:5036089-5036108 Msa0934890:intron 50.0%
CCTGTCAGAGCCTTGCTTAA+AGG - chr6_3:5036151-5036170 None:intergenic 50.0%
! CCTTTAAGCAAGGCTCTGAC+AGG + chr6_3:5036089-5036108 Msa0934890:intron 50.0%
AGCCGCCGAAGTTAACATGA+CGG + chr6_3:5036632-5036651 Msa0934890:intron 50.0%
GGAGTTTGTAGCTACACGGA+AGG + chr6_3:5036680-5036699 Msa0934890:intron 50.0%
! GTGCTTCTTTTCGTTTGGGC+GGG - chr6_3:5036718-5036737 None:intergenic 50.0%
GGGCATGTTTCGTTCAAAGG+AGG - chr6_3:5036761-5036780 None:intergenic 50.0%
AACATGCCCAAGACAGCCAT+AGG + chr6_3:5036772-5036791 Msa0934890:intron 50.0%
! GCGAGATGGTTTGTGACCTA+TGG - chr6_3:5036791-5036810 None:intergenic 50.0%
CAAGCATGAGTCTTGGGACA+AGG - chr6_3:5036813-5036832 None:intergenic 50.0%
TGTCCCAAGACTCATGCTTG+AGG + chr6_3:5036813-5036832 Msa0934890:intron 50.0%
GTCCCAAGACTCATGCTTGA+GGG + chr6_3:5036814-5036833 Msa0934890:intron 50.0%
TCCCAAGACTCATGCTTGAG+GGG + chr6_3:5036815-5036834 Msa0934890:intron 50.0%
ACCGCGAATACATACACCCT+CGG + chr6_3:5036854-5036873 Msa0934890:intron 50.0%
TGCTCCAAAGTTCAGGACAC+AGG + chr6_3:5036905-5036924 Msa0934890:intron 50.0%
GGAACGTTCCAAAATCGCCT+TGG + chr6_3:5036946-5036965 Msa0934890:CDS 50.0%
CCAGCACAAGTCTTGGAACA+AGG - chr6_3:5037028-5037047 None:intergenic 50.0%
CCTTGTTCCAAGACTTGTGC+TGG + chr6_3:5037025-5037044 Msa0934890:CDS 50.0%
TGTTCCAAGACTTGTGCTGG+GGG + chr6_3:5037028-5037047 Msa0934890:CDS 50.0%
TAGCATAGAGCTGGACCTTC+AGG - chr6_3:5037082-5037101 None:intergenic 50.0%
TTGTCCCAAGACTCGTGCTT+GGG + chr6_3:5037115-5037134 Msa0934890:CDS 50.0%
TGAAGGGCTCCTAAGCCTTT+AGG - chr6_3:5037164-5037183 None:intergenic 50.0%
GGCTTAGGAGCCCTTCAAAA+AGG + chr6_3:5037167-5037186 Msa0934890:CDS 50.0%
AGGCTCTATGACCTCCAGAA+AGG + chr6_3:5037187-5037206 Msa0934890:CDS 50.0%
!!! CCCTTTTAGAGCCTTTCTGG+AGG - chr6_3:5037201-5037220 None:intergenic 50.0%
!! AGAAAGGCTCTAAAAGGGCC+CGG + chr6_3:5037203-5037222 Msa0934890:CDS 50.0%
TTAAACCGTGGCCGCGATTG+CGG - chr6_3:5032339-5032358 None:intergenic 55.0%
GGGGAAACCGATCCTCGATT+TGG + chr6_3:5034181-5034200 Msa0934890:CDS 55.0%
!! CTCGATTTGGCGAGACATGC+CGG + chr6_3:5034194-5034213 Msa0934890:CDS 55.0%
CATGTGCCTCGGCTACATAC+CGG - chr6_3:5034216-5034235 None:intergenic 55.0%
GCCGCTTCTTCAAACGATGC+AGG - chr6_3:5034313-5034332 None:intergenic 55.0%
AGCGGCTGATCGGAGATTGA+TGG + chr6_3:5034327-5034346 Msa0934890:CDS 55.0%
GCGGCTGATCGGAGATTGAT+GGG + chr6_3:5034328-5034347 Msa0934890:CDS 55.0%
!! TTTGGCAAGCGTGGTGATGG+CGG + chr6_3:5034402-5034421 Msa0934890:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr6_3:5035388-5035407 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr6_3:5035389-5035408 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr6_3:5035388-5035407 Msa0934890:intron 55.0%
!! TTAAAGGTTGACGGGCTCGC+AGG - chr6_3:5036135-5036154 None:intergenic 55.0%
!! TTAAAGGTTGACGGGCTCGC+AGG - chr6_3:5036135-5036154 None:intergenic 55.0%
TGACGAGCTCGCAGATCCTT+GGG - chr6_3:5036339-5036358 None:intergenic 55.0%
TTGACGAGCTCGCAGATCCT+TGG - chr6_3:5036340-5036359 None:intergenic 55.0%
CAGAGCCTCTCCTTAGAGGT+TGG - chr6_3:5036407-5036426 None:intergenic 55.0%
! CCTCTAAGGAGAGGCTCTGA+CGG + chr6_3:5036408-5036427 Msa0934890:CDS 55.0%
! CTCTAAGGAGAGGCTCTGAC+GGG + chr6_3:5036409-5036428 Msa0934890:CDS 55.0%
! TCTAAGGAGAGGCTCTGACG+GGG + chr6_3:5036410-5036429 Msa0934890:CDS 55.0%
GGCCGTCATGTTAACTTCGG+CGG - chr6_3:5036637-5036656 None:intergenic 55.0%
TGACGGCCATCGACAAGTAG+TGG + chr6_3:5036649-5036668 Msa0934890:intron 55.0%
GTTCAAAGGAGGACGCCTAG+TGG - chr6_3:5036750-5036769 None:intergenic 55.0%
AGTCTTGGGACAAGGCGAGA+TGG - chr6_3:5036805-5036824 None:intergenic 55.0%
GCCCCTCAAGCATGAGTCTT+GGG - chr6_3:5036819-5036838 None:intergenic 55.0%
AGCCCCTCAAGCATGAGTCT+TGG - chr6_3:5036820-5036839 None:intergenic 55.0%
! CCCGAGGGTGTATGTATTCG+CGG - chr6_3:5036858-5036877 None:intergenic 55.0%
CCGCGAATACATACACCCTC+GGG + chr6_3:5036855-5036874 Msa0934890:intron 55.0%
CGCGAATACATACACCCTCG+GGG + chr6_3:5036856-5036875 Msa0934890:intron 55.0%
TCAGGACACAGGTCTACCCT+CGG + chr6_3:5036916-5036935 Msa0934890:intron 55.0%
GTTCCAAGACTTGTGCTGGG+GGG + chr6_3:5037029-5037048 Msa0934890:CDS 55.0%
CATAGAGCTGGACCTTCAGG+AGG - chr6_3:5037079-5037098 None:intergenic 55.0%
CTTGTCCCAAGACTCGTGCT+TGG + chr6_3:5037114-5037133 Msa0934890:CDS 55.0%
TGTCCCAAGACTCGTGCTTG+GGG + chr6_3:5037116-5037135 Msa0934890:CDS 55.0%
!!! GGGCCCTTTTAGAGCCTTTC+TGG - chr6_3:5037204-5037223 None:intergenic 55.0%
!! GAAAGGCTCTAAAAGGGCCC+GGG + chr6_3:5037204-5037223 Msa0934890:CDS 55.0%
TGTAACCGCAATCGCGGCCA+CGG + chr6_3:5032331-5032350 Msa0934890:intron 60.0%
TCGAGCACAAGGACCGGTGA+AGG + chr6_3:5033638-5033657 Msa0934890:CDS 60.0%
CGGCATGTCTCGCCAAATCG+AGG - chr6_3:5034196-5034215 None:intergenic 60.0%
GACATGCCGGTATGTAGCCG+AGG + chr6_3:5034207-5034226 Msa0934890:CDS 60.0%
!! GGTGATGGCGGAAAACCGTC+AGG + chr6_3:5034414-5034433 Msa0934890:CDS 60.0%
CCGTCAGAGCCTCTCCTTAG+AGG - chr6_3:5036411-5036430 None:intergenic 60.0%
AAGCACACGAAGCCGCCACT+AGG + chr6_3:5036732-5036751 Msa0934890:intron 60.0%
CAAAGGAGGACGCCTAGTGG+CGG - chr6_3:5036747-5036766 None:intergenic 60.0%
CAGGACACAGGTCTACCCTC+GGG + chr6_3:5036917-5036936 Msa0934890:intron 60.0%
AGGTCTACCCTCGGGATCTC+CGG + chr6_3:5036925-5036944 Msa0934890:intron 60.0%
GAACGTTCCGGAGATCCCGA+GGG - chr6_3:5036935-5036954 None:intergenic 60.0%
TAGCCCCCCAGCACAAGTCT+TGG - chr6_3:5037035-5037054 None:intergenic 60.0%
GTCCCAAGACTCGTGCTTGG+GGG + chr6_3:5037117-5037136 Msa0934890:CDS 60.0%
TCCCAAGACTCGTGCTTGGG+GGG + chr6_3:5037118-5037137 Msa0934890:CDS 60.0%
CCTTAAGATGAGCGCGCCAG+AGG - chr6_3:5037283-5037302 None:intergenic 60.0%
CCTCTGGCGCGCTCATCTTA+AGG + chr6_3:5037280-5037299 Msa0934890:CDS 60.0%
!! TGACGGGCTCGCAGGTCCTT+GGG - chr6_3:5036127-5036146 None:intergenic 65.0%
!! TTGACGGGCTCGCAGGTCCT+TGG - chr6_3:5036128-5036147 None:intergenic 65.0%
!! TGACGGGCTCGCAGGTCCTT+GGG - chr6_3:5036127-5036146 None:intergenic 65.0%
!! TTGACGGGCTCGCAGGTCCT+TGG - chr6_3:5036128-5036147 None:intergenic 65.0%
GGAACGTTCCGGAGATCCCG+AGG - chr6_3:5036936-5036955 None:intergenic 65.0%
GCCCCCCAAGCACGAGTCTT+GGG - chr6_3:5037122-5037141 None:intergenic 65.0%
AGCCCCCCAAGCACGAGTCT+TGG - chr6_3:5037123-5037142 None:intergenic 65.0%
AGATGAGCGCGCCAGAGGCT+CGG - chr6_3:5037278-5037297 None:intergenic 65.0%
GGCTCGGGAGCCCTTCTGGA+GGG - chr6_3:5037232-5037251 None:intergenic 70.0%
AGGCTCGGGAGCCCTTCTGG+AGG - chr6_3:5037233-5037252 None:intergenic 70.0%
CAGAGGCTCGGGAGCCCTTC+TGG - chr6_3:5037236-5037255 None:intergenic 70.0%
CAGAAGGGCTCCCGAGCCTC+TGG + chr6_3:5037234-5037253 Msa0934890:CDS 70.0%
!! TCTGGAGGGCGCCAGAGGCT+CGG - chr6_3:5037248-5037267 None:intergenic 70.0%
AGCCTCTGGCGCCCTCCAGA+AGG + chr6_3:5037248-5037267 Msa0934890:CDS 70.0%
GCCTCTGGCGCCCTCCAGAA+GGG + chr6_3:5037249-5037268 Msa0934890:CDS 70.0%
GGCTCGGGAGCCCTTCTGGA+GGG - chr6_3:5037232-5037251 None:intergenic 70.0%
AGGCTCGGGAGCCCTTCTGG+AGG - chr6_3:5037233-5037252 None:intergenic 70.0%
CAGAGGCTCGGGAGCCCTTC+TGG - chr6_3:5037236-5037255 None:intergenic 70.0%
CAGAAGGGCTCCCGAGCCTC+TGG + chr6_3:5037234-5037253 Msa0934890:CDS 70.0%
GATGAGCGCGCCAGAGGCTC+GGG - chr6_3:5037277-5037296 None:intergenic 70.0%
!! AGCCCTTCTGGAGGGCGCCC+GGG - chr6_3:5037224-5037243 None:intergenic 75.0%
!! GAGCCCTTCTGGAGGGCGCC+CGG - chr6_3:5037225-5037244 None:intergenic 75.0%
!! CTGGAGGGCGCCAGAGGCTC+GGG - chr6_3:5037247-5037266 None:intergenic 75.0%
!! GCCCTTCTGGAGGGCGCCAG+AGG - chr6_3:5037253-5037272 None:intergenic 75.0%
! GGCCCGGGCGCCCTCCAGAA+GGG + chr6_3:5037219-5037238 Msa0934890:CDS 80.0%
! GGGCCCGGGCGCCCTCCAGA+AGG + chr6_3:5037218-5037237 Msa0934890:CDS 85.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 5031913 5037316 5031913 ID=Msa0934890;Name=Msa0934890
chr6_3 mRNA 5031913 5037316 5031913 ID=Msa0934890-mRNA-1;Parent=Msa0934890;Name=Msa0934890-mRNA-1;_AED=0.16;_eAED=0.16;_QI=158|0.5|0.4|0.6|0.75|0.6|5|0|899
chr6_3 exon 5031913 5032049 5031913 ID=Msa0934890-mRNA-1:exon:1578;Parent=Msa0934890-mRNA-1
chr6_3 exon 5033218 5035124 5033218 ID=Msa0934890-mRNA-1:exon:1579;Parent=Msa0934890-mRNA-1
chr6_3 exon 5035498 5035705 5035498 ID=Msa0934890-mRNA-1:exon:1580;Parent=Msa0934890-mRNA-1
chr6_3 exon 5036276 5036491 5036276 ID=Msa0934890-mRNA-1:exon:1581;Parent=Msa0934890-mRNA-1
chr6_3 exon 5036927 5037316 5036927 ID=Msa0934890-mRNA-1:exon:1582;Parent=Msa0934890-mRNA-1
chr6_3 five_prime_UTR 5031913 5032049 5031913 ID=Msa0934890-mRNA-1:five_prime_utr;Parent=Msa0934890-mRNA-1
chr6_3 five_prime_UTR 5033218 5033238 5033218 ID=Msa0934890-mRNA-1:five_prime_utr;Parent=Msa0934890-mRNA-1
chr6_3 CDS 5033239 5035124 5033239 ID=Msa0934890-mRNA-1:cds;Parent=Msa0934890-mRNA-1
chr6_3 CDS 5035498 5035705 5035498 ID=Msa0934890-mRNA-1:cds;Parent=Msa0934890-mRNA-1
chr6_3 CDS 5036276 5036491 5036276 ID=Msa0934890-mRNA-1:cds;Parent=Msa0934890-mRNA-1
chr6_3 CDS 5036927 5037316 5036927 ID=Msa0934890-mRNA-1:cds;Parent=Msa0934890-mRNA-1
Gene Sequence

>Msa0934890

ATGCCTGCAATAACTATGGAAGAATTCAACATGAATAATGCAACAGAAGAAATTAGTGAAAGCTATACACCTCATAAGGATAACTTTACTGCTCAACAAGCATCACCAAGGAGTACACTAAGTCCAAGAAGTATTCAAAGTGATTCAATTGATTTAGCTATTGATGGTGTTGTAGATACTTCAATTGAACAATTGTATACCAATGTTTATGAAATGAGAAGTTCTGATCAATCACCTTCAAGGGCTAGTTTTTACTCATATGGCGAAGAATCAAGGATTGATTCAGAATTGGGTCATCTTGTTGGATATATTGGTGATTTGGAGATTAGAAAAGAGATTGTCACAACAGAAAATAAAGAAGATTCTGATGTCCATGCTATTGAGAAAGTTATTGTTTCTTCGAGCACAAGGACCGGTGAAGGATCATCGAAATCAGCTGCGAAAAGTAGAAGTTTGCATAAGAGGAATGAGAAGGGAACTAGAAAAGGAAATGGTTTTTACAATATGATGAGGAAGCATAAGAGGCTTGGTTTGAAGGACGGTATTGTTGACGAGTTAGATAATCCTGATCTTGGACCATTCTTGTTAAAGGTAACAAGAGATATGATATCTTCGGGTGAGAATCCGAACAAGGCTCTTAATTTTGGTCTTAGAGCTTTGAAATCATTTGAATTATGTAATGAAGATGGTAAACCAAGTTTGGAATTGGTGATGTGCCTTCATGTATTGGCAACAATTTACTGTAATTTAGGACAGTACAATGAGGCTATACCGATTCTCGAGCGTTCAATTGATGTTCCTGTGTTAGAGCATGGTCAAGATCATGCACTAGCTAAGTTTGCAGGGTGTATGCAATTAGGTGACACTTATGCAATGATGGGAAATATTGAGAATTCTCTACTGTTTTATACAGCAGGTCTTGAAATTCAAGGGCAGGTCTTAGGGGAAACCGATCCTCGATTTGGCGAGACATGCCGGTATGTAGCCGAGGCACATGTTCAAGCACTGCAGTTTGATGAAGCTAAGAAGCTGTGTCAAATGGCTCTTGATATTCACAAGGGAAACGGTTTGCCTGCATCGTTTGAAGAAGCGGCTGATCGGAGATTGATGGGACTAATCTGTGACTCAAAAGGTGATTATGAAAGTGCTTTAGAGCATTATGTTTTGGCAAGCGTGGTGATGGCGGAAAACCGTCAGGAACTAGACGTTGCTTCGGTTGATTGTAGCATAGGCGATGCTTATTTATCATTGGCGCGCTACGATGAAGCGATTTTTTCTTATCAGAAAGCTTTAACAGTTTTCAAATCAACCAAAGGAGAGAATCATCCAACAGTTGCTTCTGTTTTTGTAAGGTTAGCTGATCTATACAACAAAATAGGCAAGTTCAAGGAGTCAAAAACTTACTGTGAAAACGCGCTTCGGATTTTCGGGAAGAAAAAACCCGGAATCTCTCTAGAAGAGATTGCAAATGGATTGATAGATGTTGCTGCAATTTATCAATCCATGAATGATATAGAAAAGGGTTTGAAGTTACTCAAAAAAGCATTGAAGATATACAACAATGTTCCTGGTCAACACAGTACTATTGCTGGAATTGAAGCACAAATGGGAGTTATGTATTATATGTTAGGAAACTATTCTGATTCTTATAACATTTTCAAAAGTTCTGTCGCGAAATTTCGTGCTAGTGGCGAGAAAAAATCGGCTTTGTTTGGAATTGCATTGAACCAAATGGGTCTTGCTTGTGTCCAAAGGTATGCTATAAATGAAGCTGCGGATTTGTTCGAAGAGGCTAGGACTATTTTGGAAAAAGAGTATGGTCCTTATCATCAAGATACCTTAGGAGTTTATAGCAATCTTGCCGGAACCTATGATGCAATGGGAAGAGTGGATGATGCCATTGAAATGTTGGAATATGTAGTTGGAATGAGAGAAGAGAAGCTAGGAACAGCGAACCCTGATGTCGATGATGAGAAACGTAGGTTGGCCGAGTTGTTAAAAGAAGCAGGAAGAGCAAGGAACAGGAAATCAAAAAGATCATTGGAAAATCTTCTTGATTCCAACTCTCAAATCATGAAAGACAATGGCATTAAAGGTCTCGCCAAGTCGAAAAAGTCAACCTTTAAGCAAGGCTCTGACAAGTTGAAGATAGATCCCAAGGATCTGCGAGCTCGTCAACCTTTAAGCAAGGCTCTGACAGGGTCTCGCCAAATCGAAAAACACCAACCTCTAAGGAGAGGCTCTGACGGGGTCTCGCCAAATCAACATCGCCCGCAAATTAGGCGCCAAAATACTAAAGCGACAATCGGAGTCTACCCTCGGGATCTCCGGAACGTTCCAAAATCGCCTTGGGAAATCCTTCGAAATAACAAAGCTATATGGCAGGATTTCACATCATCATCACTTCGCCTTGTTCCAAGACTTGTGCTGGGGGGCTATGAACGCCCAAAACTTGATGACCTCCTGAAGGTCCAGCTCTATGCTATCATCACTTCGACTTGTCCCAAGACTCGTGCTTGGGGGGCTGTGAACCGTCATAATATTCCTAAAGGCTTAGGAGCCCTTCAAAAAGGCTCTATGACCTCCAGAAAGGCTCTAAAAGGGCCCGGGCGCCCTCCAGAAGGGCTCCCGAGCCTCTGGCGCCCTCCAGAAGGGCTCCCGAGCCTCTGGCGCGCTCATCTTAAGGCACCGCCCTTCTAG
Protein sequence

>Msa0934890

MPAITMEEFNMNNATEEISESYTPHKDNFTAQQASPRSTLSPRSIQSDSIDLAIDGVVDTSIEQLYTNVYEMRSSDQSPSRASFYSYGEESRIDSELGHLVGYIGDLEIRKEIVTTENKEDSDVHAIEKVIVSSSTRTGEGSSKSAAKSRSLHKRNEKGTRKGNGFYNMMRKHKRLGLKDGIVDELDNPDLGPFLLKVTRDMISSGENPNKALNFGLRALKSFELCNEDGKPSLELVMCLHVLATIYCNLGQYNEAIPILERSIDVPVLEHGQDHALAKFAGCMQLGDTYAMMGNIENSLLFYTAGLEIQGQVLGETDPRFGETCRYVAEAHVQALQFDEAKKLCQMALDIHKGNGLPASFEEAADRRLMGLICDSKGDYESALEHYVLASVVMAENRQELDVASVDCSIGDAYLSLARYDEAIFSYQKALTVFKSTKGENHPTVASVFVRLADLYNKIGKFKESKTYCENALRIFGKKKPGISLEEIANGLIDVAAIYQSMNDIEKGLKLLKKALKIYNNVPGQHSTIAGIEAQMGVMYYMLGNYSDSYNIFKSSVAKFRASGEKKSALFGIALNQMGLACVQRYAINEAADLFEEARTILEKEYGPYHQDTLGVYSNLAGTYDAMGRVDDAIEMLEYVVGMREEKLGTANPDVDDEKRRLAELLKEAGRARNRKSKRSLENLLDSNSQIMKDNGIKGLAKSKKSTFKQGSDKLKIDPKDLRARQPLSKALTGSRQIEKHQPLRRGSDGVSPNQHRPQIRRQNTKATIGVYPRDLRNVPKSPWEILRNNKAIWQDFTSSSLRLVPRLVLGGYERPKLDDLLKVQLYAIITSTCPKTRAWGAVNRHNIPKGLGALQKGSMTSRKALKGPGRPPEGLPSLWRPPEGLPSLWRAHLKAPPF*