Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410750 | XP_013460584.1 | 96.333 | 300 | 11 | 0 | 1 | 300 | 1 | 300 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410750 | sp|Q94AX2|PTST_ARATH | 70.098 | 204 | 61 | 0 | 97 | 300 | 74 | 277 | 1.17e-101 | 301 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410750 | A0A072UZP8 | 96.333 | 300 | 11 | 0 | 1 | 300 | 1 | 300 | 0.0 | 601 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042410 | Msa0410750 | 0.810412 | 1.167726e-50 | -8.615850e-47 |
| Msa0079650 | Msa0410750 | 0.801815 | 7.536709e-49 | -8.615850e-47 |
| Msa0094100 | Msa0410750 | 0.802859 | 4.592606e-49 | -8.615850e-47 |
| Msa0137120 | Msa0410750 | -0.801913 | 7.194586e-49 | -8.615850e-47 |
| Msa0162070 | Msa0410750 | 0.803841 | 2.875031e-49 | -8.615850e-47 |
| Msa0410750 | Msa0467920 | -0.801939 | 7.105127e-49 | -8.615850e-47 |
| Msa0410750 | Msa0524890 | -0.816999 | 4.139491e-52 | -8.615850e-47 |
| Msa0410750 | Msa0638280 | 0.816733 | 4.748597e-52 | -8.615850e-47 |
| Msa0410750 | Msa0638320 | 0.808008 | 3.824113e-50 | -8.615850e-47 |
| Msa0410750 | Msa0677270 | 0.804444 | 2.153456e-49 | -8.615850e-47 |
| Msa0410750 | Msa0792510 | 0.816460 | 5.468297e-52 | -8.615850e-47 |
| Msa0410750 | Msa0951720 | 0.817504 | 3.186898e-52 | -8.615850e-47 |
| Msa0410750 | Msa1036390 | 0.832233 | 1.062608e-55 | -8.615850e-47 |
| Msa0410750 | Msa1076680 | 0.831432 | 1.675037e-55 | -8.615850e-47 |
| Msa0410750 | Msa1087530 | 0.800536 | 1.376416e-48 | -8.615850e-47 |
| Msa0410750 | Msa1129250 | 0.818854 | 1.577115e-52 | -8.615850e-47 |
| Msa0410750 | Msa1221200 | -0.824764 | 6.764996e-54 | -8.615850e-47 |
| Msa0410750 | Msa1246740 | 0.802932 | 4.436307e-49 | -8.615850e-47 |
| Msa0410750 | Msa1358870 | -0.835617 | 1.512269e-56 | -8.615850e-47 |
| Msa0410750 | Msa1373950 | 0.820170 | 7.902564e-53 | -8.615850e-47 |
| Msa0410750 | Msa1385900 | 0.810997 | 8.727682e-51 | -8.615850e-47 |
| Msa0410750 | Msa1461250 | -0.822566 | 2.212169e-53 | -8.615850e-47 |
| Msa0265820 | Msa0410750 | 0.812884 | 3.387163e-51 | -8.615850e-47 |
| Msa0269360 | Msa0410750 | 0.820814 | 5.623472e-53 | -8.615850e-47 |
| Msa0303990 | Msa0410750 | 0.805831 | 1.103891e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410750 | MtrunA17_Chr3g0110931 | 96.333 | 300 | 11 | 0 | 1 | 300 | 1 | 300 | 0.0 | 601 |
| Msa0410750 | MtrunA17_Chr5g0415861 | 29.048 | 210 | 128 | 5 | 96 | 299 | 327 | 521 | 4.19e-13 | 69.3 |
| Msa0410750 | MtrunA17_Chr1g0180511 | 31.336 | 217 | 107 | 10 | 103 | 300 | 428 | 621 | 9.62e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410750 | AT5G39790.3 | 68.599 | 207 | 62 | 1 | 97 | 300 | 74 | 280 | 1.19e-100 | 296 |
| Msa0410750 | AT5G39790.1 | 69.608 | 204 | 58 | 1 | 97 | 300 | 74 | 273 | 5.43e-100 | 295 |
| Msa0410750 | AT5G39790.2 | 65.686 | 102 | 31 | 1 | 97 | 198 | 74 | 171 | 1.68e-36 | 130 |
| Msa0410750 | AT1G27070.1 | 40.244 | 82 | 46 | 1 | 218 | 299 | 453 | 531 | 4.27e-13 | 69.7 |
Find 65 sgRNAs with CRISPR-Local
Find 522 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCACAAATCTTCCTTATA+AGG | 0.163315 | 3_2:-52483704 | Msa0410750:three_prime_UTR |
| CAAAGGAGGTAGCCGTATTT+TGG | 0.172787 | 3_2:-52484980 | Msa0410750:CDS |
| CACCTTGTTACTAGATTAAA+AGG | 0.190998 | 3_2:-52485228 | Msa0410750:intron |
| TTGATCTTCCTTGAACCTTC+TGG | 0.254878 | 3_2:+52485270 | None:intergenic |
| CCTTCCTATTGTTCTCAAAA+TGG | 0.260419 | 3_2:+52488015 | None:intergenic |
| GGAGGTCCCGTCTAGAATTC+AGG | 0.282415 | 3_2:+52487957 | None:intergenic |
| TACTCTGCAGTTGTATATAA+AGG | 0.301352 | 3_2:-52485519 | Msa0410750:intron |
| ACAATTGAATGAGCAAATAA+AGG | 0.305608 | 3_2:-52485021 | Msa0410750:CDS |
| ATCACAAATCTTCCTTATAA+GGG | 0.317058 | 3_2:-52483703 | Msa0410750:three_prime_UTR |
| GATGGATCAATATCGTTGTT+AGG | 0.323190 | 3_2:+52487812 | None:intergenic |
| CCATCAGAGTGTGCAAGTTA+TGG | 0.325730 | 3_2:-52484067 | Msa0410750:intron |
| AGCTATTTCTTCTGCTAGTC+TGG | 0.328497 | 3_2:+52485305 | None:intergenic |
| CATCAGAGTGTGCAAGTTAT+GGG | 0.354644 | 3_2:-52484066 | Msa0410750:intron |
| GTTAACCCTTCACCAGTAAC+AGG | 0.359890 | 3_2:+52483805 | None:intergenic |
| TGTCTTAGAGCTCGAAGTTC+AGG | 0.370507 | 3_2:-52485462 | Msa0410750:intron |
| TCAACAGAGTTACCTGTTAC+TGG | 0.371155 | 3_2:-52483817 | Msa0410750:CDS |
| CAAGTTATGGGCAGCTTTGA+TGG | 0.373593 | 3_2:-52484054 | Msa0410750:CDS |
| GATAGGAAGAGGCTAATCTT+TGG | 0.394092 | 3_2:+52487936 | None:intergenic |
| GCAGAAGAAATAGCTAAATC+TGG | 0.399724 | 3_2:-52485297 | Msa0410750:CDS |
| TCGTCTTCTGAGTCTATAGA+TGG | 0.406801 | 3_2:+52487794 | None:intergenic |
| ATCGTTGTTAGGATTATCTC+TGG | 0.407137 | 3_2:+52487823 | None:intergenic |
| GTGTATGAACCTGTATATTC+TGG | 0.413226 | 3_2:+52484006 | None:intergenic |
| GTGAAGCCAACCAGCAAAAT+CGG | 0.425762 | 3_2:-52486501 | Msa0410750:CDS |
| GAAATCAAATTCTTAGTAGA+TGG | 0.435547 | 3_2:-52483853 | Msa0410750:CDS |
| CATCTTTCACCAGAATATAC+AGG | 0.435654 | 3_2:-52484015 | Msa0410750:CDS |
| TAGGTGTCATCTAGAAGCTC+AGG | 0.441243 | 3_2:-52488053 | Msa0410750:CDS |
| CAATTGAATGAGCAAATAAA+GGG | 0.451462 | 3_2:-52485020 | Msa0410750:CDS |
| TTCAGGGACGCGACATTACA+TGG | 0.460691 | 3_2:+52487974 | None:intergenic |
| CTGGTATTCCAGAAGGTTCA+AGG | 0.463181 | 3_2:-52485278 | Msa0410750:CDS |
| TCTCAACAACATTGATGCTT+AGG | 0.474149 | 3_2:-52483978 | Msa0410750:CDS |
| AGAACGCAATCTATGCAAAC+TGG | 0.476800 | 3_2:-52487872 | Msa0410750:CDS |
| CACGGCAGTAAGAGTTTGAT+AGG | 0.476999 | 3_2:+52487919 | None:intergenic |
| AGCTTTGATGGTTGGAGTCA+AGG | 0.484412 | 3_2:-52484042 | Msa0410750:CDS |
| GAGTTACCTGTTACTGGTGA+AGG | 0.488033 | 3_2:-52483811 | Msa0410750:CDS |
| TTATGGGCAGCTTTGATGGT+TGG | 0.489170 | 3_2:-52484050 | Msa0410750:CDS |
| TAACAGGTAACTCTGTTGAT+AGG | 0.492879 | 3_2:+52483821 | None:intergenic |
| AGCCATGCCGACCCAAAATA+CGG | 0.496410 | 3_2:+52484968 | None:intergenic |
| ACAACCACATACCAGTGAAC+AGG | 0.496412 | 3_2:-52487762 | Msa0410750:intron |
| TGTTGATGCGGCACAATCAA+AGG | 0.521558 | 3_2:-52484997 | Msa0410750:CDS |
| AGTAAGAGTTTGATAGGAAG+AGG | 0.524939 | 3_2:+52487925 | None:intergenic |
| AATTCTTAGTAGATGGTGAA+TGG | 0.533430 | 3_2:-52483846 | Msa0410750:CDS |
| GAAGTAAAACCTCTTCATGA+TGG | 0.536660 | 3_2:-52488196 | Msa0410750:exon |
| GAGGTCCCGTCTAGAATTCA+GGG | 0.541669 | 3_2:+52487958 | None:intergenic |
| TACTTATTTCCATCATGAAG+AGG | 0.545458 | 3_2:+52488187 | None:intergenic |
| AAATCGGTTCCTCAAAAGAC+AGG | 0.547441 | 3_2:-52486485 | Msa0410750:intron |
| CGCGTCCCTGAATTCTAGAC+GGG | 0.555646 | 3_2:-52487963 | Msa0410750:CDS |
| GTAAAGGTATACCTGTTCAC+TGG | 0.560605 | 3_2:+52487751 | None:intergenic |
| AGGAAGAGGCTAATCTTTGG+AGG | 0.567376 | 3_2:+52487939 | None:intergenic |
| GTATATAAAGGAAGATGCGT+TGG | 0.571481 | 3_2:-52485507 | Msa0410750:CDS |
| CATTGATGCTTAGGCCAGGA+AGG | 0.575460 | 3_2:-52483969 | Msa0410750:intron |
| TTACTGCCGTGTATCGAAGA+AGG | 0.576562 | 3_2:-52487907 | Msa0410750:CDS |
| AGGTGTCATCTAGAAGCTCA+GGG | 0.582260 | 3_2:-52488052 | Msa0410750:CDS |
| ACAACATTGATGCTTAGGCC+AGG | 0.585747 | 3_2:-52483973 | Msa0410750:CDS |
| GCTAAATCTGGTATTCCAGA+AGG | 0.589919 | 3_2:-52485285 | Msa0410750:CDS |
| GCAAATAAAGGGTGTTGATG+CGG | 0.593221 | 3_2:-52485009 | Msa0410750:CDS |
| AGTTACCTGTTACTGGTGAA+GGG | 0.611786 | 3_2:-52483810 | Msa0410750:CDS |
| TATACCTGTTCACTGGTATG+TGG | 0.621536 | 3_2:+52487758 | None:intergenic |
| TCGCGTCCCTGAATTCTAGA+CGG | 0.622826 | 3_2:-52487964 | Msa0410750:CDS |
| TGATGGAAATAAGTATTGCA+AGG | 0.623519 | 3_2:-52488179 | Msa0410750:intron |
| ACAAATCTTCCTTATAAGGG+TGG | 0.624360 | 3_2:-52483700 | Msa0410750:three_prime_UTR |
| GAAGGTTCAAGGAAGATCAA+CGG | 0.645940 | 3_2:-52485267 | Msa0410750:CDS |
| AAACGGCCTTCTTCGATACA+CGG | 0.653002 | 3_2:+52487901 | None:intergenic |
| AATATACAGGTTCATACACA+AGG | 0.697559 | 3_2:-52484002 | Msa0410750:CDS |
| TGATGCGGCACAATCAAAGG+AGG | 0.714646 | 3_2:-52484994 | Msa0410750:CDS |
| GGTGTCATCTAGAAGCTCAG+GGG | 0.741151 | 3_2:-52488051 | Msa0410750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTATCAACTAATATA+GGG | - | chr3_2:52483769-52483788 | Msa0410750:exon | 10.0% |
| !!! | AAAAAAAAAAACATTTTTGA+GGG | + | chr3_2:52489734-52489753 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAACATTTTTG+AGG | + | chr3_2:52489735-52489754 | None:intergenic | 10.0% |
| !!! | TTCATTATTAAACTTTTCTA+TGG | - | chr3_2:52483723-52483742 | Msa0410750:three_prime_UTR | 15.0% |
| !! | CTTTAATTATCAACTAATAT+AGG | - | chr3_2:52483768-52483787 | Msa0410750:exon | 15.0% |
| !!! | GTATATTTTTAAACTTGATA+CGG | - | chr3_2:52484559-52484578 | Msa0410750:intron | 15.0% |
| !!! | CTTTTTTTAAACCTTTTAAA+AGG | + | chr3_2:52484782-52484801 | None:intergenic | 15.0% |
| !! | TTAAAAGGTTTAAAAAAAGA+AGG | - | chr3_2:52484783-52484802 | Msa0410750:intron | 15.0% |
| !! | CAAATATCTTATAAGATAAT+GGG | + | chr3_2:52485953-52485972 | None:intergenic | 15.0% |
| !! | ACAAATATCTTATAAGATAA+TGG | + | chr3_2:52485954-52485973 | None:intergenic | 15.0% |
| !! | TATTACATATATTCTAAACA+AGG | + | chr3_2:52486101-52486120 | None:intergenic | 15.0% |
| !!! | TTGAAAGTTTGAATTTTTTT+TGG | - | chr3_2:52486331-52486350 | Msa0410750:intron | 15.0% |
| !!! | TGAAAGTTTGAATTTTTTTT+GGG | - | chr3_2:52486332-52486351 | Msa0410750:intron | 15.0% |
| !! | GATTCTTCAATAATTTAAAT+AGG | - | chr3_2:52486370-52486389 | Msa0410750:intron | 15.0% |
| !!! | ATTCTAAAATTTCAAAACAA+TGG | + | chr3_2:52486772-52486791 | None:intergenic | 15.0% |
| !!! | TTTTTTTATGTTGTTTTACT+TGG | + | chr3_2:52487202-52487221 | None:intergenic | 15.0% |
| !!! | AAATAATTATCCCATTTTAT+CGG | + | chr3_2:52488225-52488244 | None:intergenic | 15.0% |
| !!! | ATAAAATGGGATAATTATTT+TGG | - | chr3_2:52488225-52488244 | Msa0410750:intron | 15.0% |
| !!! | TAAAATGGGATAATTATTTT+GGG | - | chr3_2:52488226-52488245 | Msa0410750:intron | 15.0% |
| !! | CTAAATTTAAATTGATTAAC+AGG | - | chr3_2:52488314-52488333 | Msa0410750:intron | 15.0% |
| !!! | AAAAAAAAAACATTTTTGAG+GGG | + | chr3_2:52489733-52489752 | None:intergenic | 15.0% |
| !! | AACACTAAAAATTATTATGT+AGG | - | chr3_2:52490563-52490582 | Msa0410750:intron | 15.0% |
| !! | CGAATGAAATTAAAGAAAAA+AGG | + | chr3_2:52483678-52483697 | None:intergenic | 20.0% |
| !!! | TATTAAACTTTTCTATGGTA+TGG | - | chr3_2:52483728-52483747 | Msa0410750:three_prime_UTR | 20.0% |
| !!! | ATTAAACTTTTCTATGGTAT+GGG | - | chr3_2:52483729-52483748 | Msa0410750:three_prime_UTR | 20.0% |
| !! | TATTTATATCGTAGATAAGA+TGG | - | chr3_2:52484374-52484393 | Msa0410750:intron | 20.0% |
| !!! | TTTCATATCTCTCTTTTAAT+TGG | - | chr3_2:52484993-52485012 | Msa0410750:CDS | 20.0% |
| !!! | ACCTAGTTAATGTAAATTTT+AGG | - | chr3_2:52485816-52485835 | Msa0410750:intron | 20.0% |
| !! | ACCTAAAATTTACATTAACT+AGG | + | chr3_2:52485820-52485839 | None:intergenic | 20.0% |
| !! | TCATTCTTTATTCTAACTTT+CGG | - | chr3_2:52486032-52486051 | Msa0410750:intron | 20.0% |
| !!! | ATTTTTTTTGGGTAAATTCT+TGG | - | chr3_2:52486343-52486362 | Msa0410750:intron | 20.0% |
| !! | GTATAATCAAGTAAATGTAA+AGG | + | chr3_2:52486710-52486729 | None:intergenic | 20.0% |
| !! | AAATTGTATATAGCAGATAA+AGG | - | chr3_2:52487873-52487892 | Msa0410750:CDS | 20.0% |
| !!! | TTAGCATTAATTTGAAATCT+AGG | - | chr3_2:52488010-52488029 | Msa0410750:CDS | 20.0% |
| !!! | AGTTTTATTTTTCATAGCAA+TGG | - | chr3_2:52488036-52488055 | Msa0410750:CDS | 20.0% |
| !!! | GTTTTATTTTTCATAGCAAT+GGG | - | chr3_2:52488037-52488056 | Msa0410750:CDS | 20.0% |
| !!! | AATAATTATCCCATTTTATC+GGG | + | chr3_2:52488224-52488243 | None:intergenic | 20.0% |
| !!! | CTAAATTTAAATGGATTAAC+AGG | - | chr3_2:52488259-52488278 | Msa0410750:intron | 20.0% |
| !!! | GAAAATGGGATAATTATTTT+GGG | - | chr3_2:52488281-52488300 | Msa0410750:intron | 20.0% |
| !! | ATATGCTGAAACATTTAATA+AGG | - | chr3_2:52488852-52488871 | Msa0410750:intron | 20.0% |
| !! | TATGCTGAAACATTTAATAA+GGG | - | chr3_2:52488853-52488872 | Msa0410750:intron | 20.0% |
| !! | CATATACATAAACACTTATA+TGG | + | chr3_2:52489996-52490015 | None:intergenic | 20.0% |
| !!! | TTTGACTTTACTTTATCTTT+TGG | + | chr3_2:52490030-52490049 | None:intergenic | 20.0% |
| !! | AAGATAAAGTAAAGTCAAAT+TGG | - | chr3_2:52490031-52490050 | Msa0410750:intron | 20.0% |
| !! | AAAGTACTACTAATGCTTAA+TGG | - | chr3_2:52484180-52484199 | Msa0410750:intron | 25.0% |
| ! | ATATGAGTAAGATTAGGAAT+TGG | - | chr3_2:52484348-52484367 | Msa0410750:intron | 25.0% |
| ! | TATGAGTAAGATTAGGAATT+GGG | - | chr3_2:52484349-52484368 | Msa0410750:intron | 25.0% |
| ! | CTAAATCTCTCTTTACAATT+TGG | + | chr3_2:52484530-52484549 | None:intergenic | 25.0% |
| ! | AAGAGAGATTTAGAAGTAAA+TGG | - | chr3_2:52484537-52484556 | Msa0410750:intron | 25.0% |
| !! | GAATTAGTTGTTGTTATTGT+TGG | - | chr3_2:52484634-52484653 | Msa0410750:intron | 25.0% |
| !!! | TTGTCTATATAGCTTTATGA+TGG | - | chr3_2:52484731-52484750 | Msa0410750:intron | 25.0% |
| !!! | ACCTTTTAAAAGGCAATATT+GGG | + | chr3_2:52484772-52484791 | None:intergenic | 25.0% |
| !!! | AACCTTTTAAAAGGCAATAT+TGG | + | chr3_2:52484773-52484792 | None:intergenic | 25.0% |
| !! | TTCTTTTATCTCACTCATAT+TGG | + | chr3_2:52484834-52484853 | None:intergenic | 25.0% |
| !! | TTTCTTCTTTTCATTATGTC+CGG | - | chr3_2:52485025-52485044 | Msa0410750:CDS | 25.0% |
| ! | AATAAATTGGTCATCTTTGT+TGG | + | chr3_2:52485115-52485134 | None:intergenic | 25.0% |
| ! | ATGGCTTACTCTAAATAAAT+TGG | + | chr3_2:52485128-52485147 | None:intergenic | 25.0% |
| ! | AGAATTGGAAGGAAATTTAA+TGG | - | chr3_2:52485199-52485218 | Msa0410750:intron | 25.0% |
| ! | CTAATCATTTCTAATCATGA+GGG | - | chr3_2:52485589-52485608 | Msa0410750:intron | 25.0% |
| ! | TACACAATTTCCAAAATTCT+AGG | - | chr3_2:52485713-52485732 | Msa0410750:intron | 25.0% |
| ! | ACTACACAAGATATAACTTT+AGG | - | chr3_2:52485917-52485936 | Msa0410750:intron | 25.0% |
| !! | AAGATATAACTTTAGGAACA+TGG | - | chr3_2:52485924-52485943 | Msa0410750:intron | 25.0% |
| ! | TTGTTGTAACTATCAATATC+TGG | - | chr3_2:52486058-52486077 | Msa0410750:intron | 25.0% |
| ! | TACATATATTCTAAACAAGG+TGG | + | chr3_2:52486098-52486117 | None:intergenic | 25.0% |
| !! | TATCCTAAGTTCTTACATTT+TGG | - | chr3_2:52486139-52486158 | Msa0410750:intron | 25.0% |
| !! | TTGAACATATTTGCTTGTTT+TGG | - | chr3_2:52486189-52486208 | Msa0410750:intron | 25.0% |
| !! | CTTTTCTATTCTCTTTAACA+GGG | - | chr3_2:52486223-52486242 | Msa0410750:intron | 25.0% |
| !! | TTTTCTATTCTCTTTAACAG+GGG | - | chr3_2:52486224-52486243 | Msa0410750:intron | 25.0% |
| !! | TCATACTATTTCTCTCTATT+TGG | - | chr3_2:52486733-52486752 | Msa0410750:intron | 25.0% |
| ! | AACTAATTGGCATGATTAAT+GGG | + | chr3_2:52487000-52487019 | None:intergenic | 25.0% |
| ! | TAACTAATTGGCATGATTAA+TGG | + | chr3_2:52487001-52487020 | None:intergenic | 25.0% |
| ! | GATATAAACAGAGAATATAG+AGG | - | chr3_2:52487163-52487182 | Msa0410750:intron | 25.0% |
| !!! | TTCTGGTTGATTTTTCTTAT+TGG | + | chr3_2:52487449-52487468 | None:intergenic | 25.0% |
| ! | AATAAGAAAAATCAACCAGA+AGG | - | chr3_2:52487448-52487467 | Msa0410750:intron | 25.0% |
| ! | ATAAGAAAAATCAACCAGAA+GGG | - | chr3_2:52487449-52487468 | Msa0410750:intron | 25.0% |
| ! | TTGTAAGTTATGAGAACTAA+GGG | + | chr3_2:52487573-52487592 | None:intergenic | 25.0% |
| ! | AAAAAAGGTAAGTTTGTATG+CGG | + | chr3_2:52487604-52487623 | None:intergenic | 25.0% |
| ! | TACGTTGAGATTACTTTATT+AGG | - | chr3_2:52487742-52487761 | Msa0410750:intron | 25.0% |
| ! | ATATCCTAAATAATCACAGT+TGG | - | chr3_2:52488082-52488101 | Msa0410750:intron | 25.0% |
| ! | TTGTAAAAAAATCCAACCAA+GGG | + | chr3_2:52488167-52488186 | None:intergenic | 25.0% |
| ! | ATTGTAAAAAAATCCAACCA+AGG | + | chr3_2:52488168-52488187 | None:intergenic | 25.0% |
| !!! | GATTTTTTTACAATGCAATC+TGG | - | chr3_2:52488174-52488193 | Msa0410750:intron | 25.0% |
| !! | ATAGTGCTGCTAAATTTAAA+TGG | - | chr3_2:52488250-52488269 | Msa0410750:intron | 25.0% |
| !!! | TAAATGGATTAACAGGAAAA+TGG | - | chr3_2:52488266-52488285 | Msa0410750:intron | 25.0% |
| !!! | AAATGGATTAACAGGAAAAT+GGG | - | chr3_2:52488267-52488286 | Msa0410750:intron | 25.0% |
| !! | GGAAAATGGGATAATTATTT+TGG | - | chr3_2:52488280-52488299 | Msa0410750:intron | 25.0% |
| ! | AACTCACATTTCATTCAAAT+TGG | + | chr3_2:52488383-52488402 | None:intergenic | 25.0% |
| ! | AATTTGAATGAAATGTGAGT+TGG | - | chr3_2:52488382-52488401 | Msa0410750:intron | 25.0% |
| ! | AGATATATAGCTAAAGTAGT+TGG | - | chr3_2:52488551-52488570 | Msa0410750:intron | 25.0% |
| ! | TATGAAGTTCGTTTATATAC+AGG | - | chr3_2:52488662-52488681 | Msa0410750:intron | 25.0% |
| !! | GTTTTCTTATCTCCATTATA+TGG | + | chr3_2:52488752-52488771 | None:intergenic | 25.0% |
| !! | TACCTTTTAATCTAGTAACA+AGG | + | chr3_2:52489219-52489238 | None:intergenic | 25.0% |
| ! | ACAATTGAATGAGCAAATAA+AGG | - | chr3_2:52489421-52489440 | Msa0410750:intron | 25.0% |
| ! | CAATTGAATGAGCAAATAAA+GGG | - | chr3_2:52489422-52489441 | Msa0410750:intron | 25.0% |
| ! | TATATACTCATAGCTTTCTA+AGG | - | chr3_2:52489620-52489639 | Msa0410750:intron | 25.0% |
| !! | TTTGATGGGATGAATATTTT+TGG | + | chr3_2:52489826-52489845 | None:intergenic | 25.0% |
| ! | AACATGTACTTATTTCGTAT+CGG | + | chr3_2:52489875-52489894 | None:intergenic | 25.0% |
| ! | AATATGCTGAAAACAACTTA+TGG | - | chr3_2:52490106-52490125 | Msa0410750:intron | 25.0% |
| ! | AAACTTTGCAAGAGAATTTA+GGG | + | chr3_2:52490219-52490238 | None:intergenic | 25.0% |
| ! | AAAACTTTGCAAGAGAATTT+AGG | + | chr3_2:52490220-52490239 | None:intergenic | 25.0% |
| ! | GAAATCAAATTCTTAGTAGA+TGG | - | chr3_2:52490589-52490608 | Msa0410750:intron | 25.0% |
| ! | AATCACAAATCTTCCTTATA+AGG | - | chr3_2:52490738-52490757 | Msa0410750:intron | 25.0% |
| ! | ATCACAAATCTTCCTTATAA+GGG | - | chr3_2:52490739-52490758 | Msa0410750:intron | 25.0% |
| !!! | ATAACATTAGCTTTTGTGAG+TGG | + | chr3_2:52483598-52483617 | None:intergenic | 30.0% |
| GGGTCAATTAATATAGAGTT+TGG | + | chr3_2:52483796-52483815 | None:intergenic | 30.0% | |
| GCTGAAAAATCATGTATGTT+GGG | + | chr3_2:52483816-52483835 | None:intergenic | 30.0% | |
| TGCTGAAAAATCATGTATGT+TGG | + | chr3_2:52483817-52483836 | None:intergenic | 30.0% | |
| ATACATATCTCAAACCTCAA+GGG | + | chr3_2:52483910-52483929 | None:intergenic | 30.0% | |
| ! | TTTGAGATATGTATGGCATT+GGG | - | chr3_2:52483916-52483935 | Msa0410750:intron | 30.0% |
| CAAAAAAAACATTGCTATGC+TGG | - | chr3_2:52484093-52484112 | Msa0410750:intron | 30.0% | |
| ! | GCTGGATAATTTTACTGAAT+TGG | - | chr3_2:52484111-52484130 | Msa0410750:intron | 30.0% |
| ATGACATGGATGAATGTATT+TGG | - | chr3_2:52484141-52484160 | Msa0410750:intron | 30.0% | |
| ! | ACTTTTATTACCTAACCATG+AGG | - | chr3_2:52484205-52484224 | Msa0410750:intron | 30.0% |
| ! | CTTTTATTACCTAACCATGA+GGG | - | chr3_2:52484206-52484225 | Msa0410750:intron | 30.0% |
| TACTCATATCGTAGATAAGT+AGG | + | chr3_2:52484337-52484356 | None:intergenic | 30.0% | |
| TCTACGATATGAGTAAGATT+AGG | - | chr3_2:52484342-52484361 | Msa0410750:intron | 30.0% | |
| ! | TTAAGTGGTTTGTCAATTTG+TGG | - | chr3_2:52484409-52484428 | Msa0410750:intron | 30.0% |
| ! | GATTCATATAAGTACTGTGA+AGG | - | chr3_2:52484436-52484455 | Msa0410750:intron | 30.0% |
| CACATTCTACCTTTAAGTAT+CGG | + | chr3_2:52484489-52484508 | None:intergenic | 30.0% | |
| CAACTAATTCTTATCTCACT+AGG | + | chr3_2:52484624-52484643 | None:intergenic | 30.0% | |
| ! | TTAGTTGTTGTTATTGTTGG+TGG | - | chr3_2:52484637-52484656 | Msa0410750:intron | 30.0% |
| AAAGCATAACTCAGTTAGTA+GGG | - | chr3_2:52484852-52484871 | Msa0410750:intron | 30.0% | |
| ! | TGGAAGGAAATTTAATGGAT+AGG | - | chr3_2:52485204-52485223 | Msa0410750:intron | 30.0% |
| TAAATCCTGTCACAATTGTA+CGG | - | chr3_2:52485278-52485297 | Msa0410750:CDS | 30.0% | |
| TGTCCAGTTTAATGGTTATA+GGG | + | chr3_2:52485420-52485439 | None:intergenic | 30.0% | |
| ATGTCCAGTTTAATGGTTAT+AGG | + | chr3_2:52485421-52485440 | None:intergenic | 30.0% | |
| TAATAGATTATCTTCACGCA+TGG | - | chr3_2:52485536-52485555 | Msa0410750:intron | 30.0% | |
| CCTCATGATTAGAAATGATT+AGG | + | chr3_2:52485591-52485610 | None:intergenic | 30.0% | |
| CCTAATCATTTCTAATCATG+AGG | - | chr3_2:52485588-52485607 | Msa0410750:intron | 30.0% | |
| GACGCTTATAAAAGGATAAA+TGG | - | chr3_2:52485669-52485688 | Msa0410750:intron | 30.0% | |
| TAAAAGGATAAATGGCATAG+AGG | - | chr3_2:52485677-52485696 | Msa0410750:intron | 30.0% | |
| AAAAGGATAAATGGCATAGA+GGG | - | chr3_2:52485678-52485697 | Msa0410750:intron | 30.0% | |
| !! | AAATTTTAGGTCAGTTTCCT+TGG | - | chr3_2:52485829-52485848 | Msa0410750:intron | 30.0% |
| TAAACGTTATCCTTACGATA+TGG | - | chr3_2:52485985-52486004 | Msa0410750:intron | 30.0% | |
| TTCTTTATTCTAACTTTCGG+AGG | - | chr3_2:52486035-52486054 | Msa0410750:intron | 30.0% | |
| !!! | GTAATATTTTTTCCGTGAGT+CGG | - | chr3_2:52486115-52486134 | Msa0410750:intron | 30.0% |
| CAACCAAAATGTAAGAACTT+AGG | + | chr3_2:52486145-52486164 | None:intergenic | 30.0% | |
| CCTGTTAAAGAGAATAGAAA+AGG | + | chr3_2:52486225-52486244 | None:intergenic | 30.0% | |
| ! | CCTTTTCTATTCTCTTTAAC+AGG | - | chr3_2:52486222-52486241 | Msa0410750:intron | 30.0% |
| TACTTATTTCCATCATGAAG+AGG | + | chr3_2:52486258-52486277 | None:intergenic | 30.0% | |
| ! | TGATGGAAATAAGTATTGCA+AGG | - | chr3_2:52486263-52486282 | Msa0410750:intron | 30.0% |
| !! | TCTACCATTTTGAGAACAAT+AGG | - | chr3_2:52486423-52486442 | Msa0410750:intron | 30.0% |
| !! | CATTTTGAGAACAATAGGAA+GGG | - | chr3_2:52486428-52486447 | Msa0410750:intron | 30.0% |
| AGTAGAGTAAGAAGAAAAGT+GGG | + | chr3_2:52486839-52486858 | None:intergenic | 30.0% | |
| AAGTAGAGTAAGAAGAAAAG+TGG | + | chr3_2:52486840-52486859 | None:intergenic | 30.0% | |
| !! | TTCTTACTCTACTTTTGTCT+AGG | - | chr3_2:52486846-52486865 | Msa0410750:intron | 30.0% |
| AAACAATTCCCATCTTACAA+AGG | + | chr3_2:52486900-52486919 | None:intergenic | 30.0% | |
| CTAGACAAACTCTAACTAAT+TGG | + | chr3_2:52487013-52487032 | None:intergenic | 30.0% | |
| AGAATATAGAGGAAAAACAG+AGG | - | chr3_2:52487174-52487193 | Msa0410750:intron | 30.0% | |
| !!! | AAAAAAGGGTGTTCAGTTTT+TGG | + | chr3_2:52487491-52487510 | None:intergenic | 30.0% |
| CTTGTAAGTTATGAGAACTA+AGG | + | chr3_2:52487574-52487593 | None:intergenic | 30.0% | |
| !!! | GCATACAAACTTACCTTTTT+TGG | - | chr3_2:52487603-52487622 | Msa0410750:intron | 30.0% |
| !!! | AACTTACCTTTTTTGGCAAA+TGG | - | chr3_2:52487610-52487629 | Msa0410750:intron | 30.0% |
| !!! | ACTTACCTTTTTTGGCAAAT+GGG | - | chr3_2:52487611-52487630 | Msa0410750:intron | 30.0% |
| TCAATATCCTGTAAGTTATG+AGG | - | chr3_2:52487693-52487712 | Msa0410750:intron | 30.0% | |
| ! | TTTAGAACCTCATAACTTAC+AGG | + | chr3_2:52487703-52487722 | None:intergenic | 30.0% |
| !!! | CTCGCGTTTTGATTTTTTTT+TGG | - | chr3_2:52487775-52487794 | Msa0410750:CDS | 30.0% |
| AAGTTGCATACACTCAAAAA+AGG | + | chr3_2:52487820-52487839 | None:intergenic | 30.0% | |
| TGATCCAACTGTGATTATTT+AGG | + | chr3_2:52488089-52488108 | None:intergenic | 30.0% | |
| AATTAAAGATACTAGACCCT+TGG | - | chr3_2:52488148-52488167 | Msa0410750:intron | 30.0% | |
| TAAGTATGATCCCGATAAAA+TGG | - | chr3_2:52488211-52488230 | Msa0410750:intron | 30.0% | |
| AAGTATGATCCCGATAAAAT+GGG | - | chr3_2:52488212-52488231 | Msa0410750:intron | 30.0% | |
| TTAACCATCCACAAATTTCT+AGG | - | chr3_2:52488455-52488474 | Msa0410750:intron | 30.0% | |
| AGTTCGTTTATATACAGGTT+AGG | - | chr3_2:52488667-52488686 | Msa0410750:intron | 30.0% | |
| ATAGAGTAGCTTCCATATAA+TGG | - | chr3_2:52488737-52488756 | Msa0410750:intron | 30.0% | |
| TGAAGAATATCAAACCACTA+AGG | + | chr3_2:52488796-52488815 | None:intergenic | 30.0% | |
| ! | AAAGAGGCAAGTTTAAGATA+TGG | + | chr3_2:52488903-52488922 | None:intergenic | 30.0% |
| TACTCTGCAGTTGTATATAA+AGG | - | chr3_2:52488923-52488942 | Msa0410750:intron | 30.0% | |
| AAATAGCCTCAAAATTGAGA+AGG | + | chr3_2:52489022-52489041 | None:intergenic | 30.0% | |
| TAGTATCAAACGAAGAAATG+CGG | + | chr3_2:52489055-52489074 | None:intergenic | 30.0% | |
| GTGCTATAATGTTATCTCTT+TGG | - | chr3_2:52489101-52489120 | Msa0410750:intron | 30.0% | |
| CTATAATGTTATCTCTTTGG+AGG | - | chr3_2:52489104-52489123 | Msa0410750:intron | 30.0% | |
| CACCTTGTTACTAGATTAAA+AGG | - | chr3_2:52489214-52489233 | Msa0410750:intron | 30.0% | |
| !! | TAGAAGTGGTGGATTTATTT+GGG | + | chr3_2:52489261-52489280 | None:intergenic | 30.0% |
| !! | ATAGAAGTGGTGGATTTATT+TGG | + | chr3_2:52489262-52489281 | None:intergenic | 30.0% |
| ATAAATCCACCACTTCTATA+TGG | - | chr3_2:52489263-52489282 | Msa0410750:intron | 30.0% | |
| CATCAATAAGGATACAAAAG+AGG | + | chr3_2:52489365-52489384 | None:intergenic | 30.0% | |
| ACTTCCAAATATCGAGAATA+TGG | - | chr3_2:52489522-52489541 | Msa0410750:intron | 30.0% | |
| CTTCCAAATATCGAGAATAT+GGG | - | chr3_2:52489523-52489542 | Msa0410750:intron | 30.0% | |
| TGAAAAAAGTTAGTTGCATC+AGG | + | chr3_2:52489670-52489689 | None:intergenic | 30.0% | |
| TGCTGAAATCAAATTTGTAC+AGG | + | chr3_2:52489900-52489919 | None:intergenic | 30.0% | |
| AGCATTTGCTTCAAATGTTT+AGG | - | chr3_2:52489923-52489942 | Msa0410750:intron | 30.0% | |
| CATATTTCCATAAGTTTCTC+AGG | + | chr3_2:52490092-52490111 | None:intergenic | 30.0% | |
| AATATACAGGTTCATACACA+AGG | - | chr3_2:52490440-52490459 | Msa0410750:intron | 30.0% | |
| TGATAAAAATTGTACCTTCC+TGG | + | chr3_2:52490490-52490509 | None:intergenic | 30.0% | |
| TTGAGTTAGAAGAAAACTTC+AGG | + | chr3_2:52490544-52490563 | None:intergenic | 30.0% | |
| AATTCTTAGTAGATGGTGAA+TGG | - | chr3_2:52490596-52490615 | Msa0410750:intron | 30.0% | |
| ! | ACTTTTCTATGGTATGGGTA+TGG | - | chr3_2:52483734-52483753 | Msa0410750:three_prime_UTR | 35.0% |
| CATACATATCTCAAACCTCA+AGG | + | chr3_2:52483911-52483930 | None:intergenic | 35.0% | |
| ! | CTTGAGGTTTGAGATATGTA+TGG | - | chr3_2:52483909-52483928 | Msa0410750:intron | 35.0% |
| ! | GTTTGAGATATGTATGGCAT+TGG | - | chr3_2:52483915-52483934 | Msa0410750:intron | 35.0% |
| ! | ATTTTGTGTGTTAACCCACT+TGG | - | chr3_2:52483942-52483961 | Msa0410750:intron | 35.0% |
| ACCTAGGTTTACTTTCTTGT+TGG | + | chr3_2:52484255-52484274 | None:intergenic | 35.0% | |
| ACAAGAAAGTAAACCTAGGT+TGG | - | chr3_2:52484255-52484274 | Msa0410750:intron | 35.0% | |
| CAAGAAAGTAAACCTAGGTT+GGG | - | chr3_2:52484256-52484275 | Msa0410750:intron | 35.0% | |
| ! | CTGTTTTGTATGGTTGAGTT+AGG | + | chr3_2:52484287-52484306 | None:intergenic | 35.0% |
| CTAACTCAACCATACAAAAC+AGG | - | chr3_2:52484285-52484304 | Msa0410750:intron | 35.0% | |
| ! | CATATAAGTACTGTGAAGGT+TGG | - | chr3_2:52484440-52484459 | Msa0410750:intron | 35.0% |
| TACTGTGAAGGTTGGAAAAT+TGG | - | chr3_2:52484448-52484467 | Msa0410750:intron | 35.0% | |
| CATGATAGTCCGATACTTAA+AGG | - | chr3_2:52484477-52484496 | Msa0410750:intron | 35.0% | |
| TGAGATTATCTATAACGCAG+AGG | - | chr3_2:52484689-52484708 | Msa0410750:intron | 35.0% | |
| AGACAAATTTCCACCATTGA+AGG | + | chr3_2:52484717-52484736 | None:intergenic | 35.0% | |
| ! | GCCCAATATTGCCTTTTAAA+AGG | - | chr3_2:52484768-52484787 | Msa0410750:intron | 35.0% |
| ! | GAAAGCATAACTCAGTTAGT+AGG | - | chr3_2:52484851-52484870 | Msa0410750:intron | 35.0% |
| TTCCCTACTTATTCACCTTA+AGG | - | chr3_2:52484912-52484931 | Msa0410750:intron | 35.0% | |
| TCCCTACTTATTCACCTTAA+GGG | - | chr3_2:52484913-52484932 | Msa0410750:intron | 35.0% | |
| ACCCTTAAGGTGAATAAGTA+GGG | + | chr3_2:52484917-52484936 | None:intergenic | 35.0% | |
| AACCCTTAAGGTGAATAAGT+AGG | + | chr3_2:52484918-52484937 | None:intergenic | 35.0% | |
| GATTCACACATAAACTGACA+TGG | + | chr3_2:52485147-52485166 | None:intergenic | 35.0% | |
| TCAGTTTATGTGTGAATCAC+TGG | - | chr3_2:52485149-52485168 | Msa0410750:intron | 35.0% | |
| GAATTGGCGTATACTAGAAT+TGG | - | chr3_2:52485184-52485203 | Msa0410750:intron | 35.0% | |
| GATTTATCCTCATCATCAAG+TGG | + | chr3_2:52485264-52485283 | None:intergenic | 35.0% | |
| AAAAACACCCTGACATAGAA+TGG | - | chr3_2:52485361-52485380 | Msa0410750:intron | 35.0% | |
| AAAACACCCTGACATAGAAT+GGG | - | chr3_2:52485362-52485381 | Msa0410750:intron | 35.0% | |
| AGTTTAATGGTTATAGGGAG+TGG | + | chr3_2:52485415-52485434 | None:intergenic | 35.0% | |
| ACTCCCTATAACCATTAAAC+TGG | - | chr3_2:52485414-52485433 | Msa0410750:intron | 35.0% | |
| AACCATTAAACTGGACATGA+AGG | - | chr3_2:52485423-52485442 | Msa0410750:intron | 35.0% | |
| ACCATTAAACTGGACATGAA+GGG | - | chr3_2:52485424-52485443 | Msa0410750:intron | 35.0% | |
| ATGATTAGGTGCAGTAAGAA+TGG | + | chr3_2:52485577-52485596 | None:intergenic | 35.0% | |
| ! | TTTTGGCCTAACCCTAATTT+GGG | + | chr3_2:52485637-52485656 | None:intergenic | 35.0% |
| ! | TGGAAGATCACCTAGAATTT+TGG | + | chr3_2:52485726-52485745 | None:intergenic | 35.0% |
| ! | TCCTTGGTAATATTCAACAC+TGG | - | chr3_2:52485845-52485864 | Msa0410750:intron | 35.0% |
| ! | ACCAGTGTTGAATATTACCA+AGG | + | chr3_2:52485849-52485868 | None:intergenic | 35.0% |
| TTCAACACTGGTACTCTTTA+AGG | - | chr3_2:52485857-52485876 | Msa0410750:intron | 35.0% | |
| TCAACACTGGTACTCTTTAA+GGG | - | chr3_2:52485858-52485877 | Msa0410750:intron | 35.0% | |
| !!! | GTTTTAGCTTCCATATCGTA+AGG | + | chr3_2:52485998-52486017 | None:intergenic | 35.0% |
| ACAAGGTGGTTGAAATTTAC+TGG | + | chr3_2:52486084-52486103 | None:intergenic | 35.0% | |
| !!! | ATTTGCTTGTTTTGGAGCTA+AGG | - | chr3_2:52486197-52486216 | Msa0410750:intron | 35.0% |
| GAAGTAAAACCTCTTCATGA+TGG | - | chr3_2:52486246-52486265 | Msa0410750:intron | 35.0% | |
| CCTTCCTATTGTTCTCAAAA+TGG | + | chr3_2:52486430-52486449 | None:intergenic | 35.0% | |
| !! | CCATTTTGAGAACAATAGGA+AGG | - | chr3_2:52486427-52486446 | Msa0410750:intron | 35.0% |
| AGTAAGAGTTTGATAGGAAG+AGG | + | chr3_2:52486520-52486539 | None:intergenic | 35.0% | |
| GATTGCGTTCTACAGAAAAA+CGG | + | chr3_2:52486561-52486580 | None:intergenic | 35.0% | |
| ATCGTTGTTAGGATTATCTC+TGG | + | chr3_2:52486622-52486641 | None:intergenic | 35.0% | |
| GATGGATCAATATCGTTGTT+AGG | + | chr3_2:52486633-52486652 | None:intergenic | 35.0% | |
| CTCTCTATTTGGTAAACAGA+TGG | - | chr3_2:52486744-52486763 | Msa0410750:intron | 35.0% | |
| GTAGAGTAAGAAGAAAAGTG+GGG | + | chr3_2:52486838-52486857 | None:intergenic | 35.0% | |
| ATTCAGTCTCCTTTGTAAGA+TGG | - | chr3_2:52486888-52486907 | Msa0410750:intron | 35.0% | |
| TTCAGTCTCCTTTGTAAGAT+GGG | - | chr3_2:52486889-52486908 | Msa0410750:intron | 35.0% | |
| CAAAGACAACAAAAATGTGG+AGG | + | chr3_2:52486927-52486946 | None:intergenic | 35.0% | |
| CCTCAAAGACAACAAAAATG+TGG | + | chr3_2:52486930-52486949 | None:intergenic | 35.0% | |
| !! | CCACATTTTTGTTGTCTTTG+AGG | - | chr3_2:52486927-52486946 | Msa0410750:intron | 35.0% |
| TACTCTTTACCAATGTAGTC+AGG | - | chr3_2:52487052-52487071 | Msa0410750:intron | 35.0% | |
| ATCTAGATCCTACATAGGAT+TGG | - | chr3_2:52487075-52487094 | Msa0410750:intron | 35.0% | |
| GCAAACAAGCAAAAAAACAG+AGG | - | chr3_2:52487227-52487246 | Msa0410750:intron | 35.0% | |
| CAAAAAAACAGAGGAAACAG+AGG | - | chr3_2:52487236-52487255 | Msa0410750:intron | 35.0% | |
| AAAACAGAGCAAAAACGAAC+CGG | - | chr3_2:52487289-52487308 | Msa0410750:intron | 35.0% | |
| CAAAGTAACGGCACAAAAAA+GGG | + | chr3_2:52487505-52487524 | None:intergenic | 35.0% | |
| TCAAAGTAACGGCACAAAAA+AGG | + | chr3_2:52487506-52487525 | None:intergenic | 35.0% | |
| TAGCAGTCAGTTCAAAGTAA+CGG | + | chr3_2:52487517-52487536 | None:intergenic | 35.0% | |
| GAGAACTAAGGGAAGTAAAA+AGG | + | chr3_2:52487562-52487581 | None:intergenic | 35.0% | |
| !!! | CTTACCTTTTTTGGCAAATG+GGG | - | chr3_2:52487612-52487631 | Msa0410750:intron | 35.0% |
| ! | ATCAAAACGCGAGATACTTT+TGG | + | chr3_2:52487768-52487787 | None:intergenic | 35.0% |
| ATGCTAATGCAAAAGATCTC+AGG | + | chr3_2:52487997-52488016 | None:intergenic | 35.0% | |
| !!! | CATAGCAATGGGTTTTGTTT+TGG | - | chr3_2:52488048-52488067 | Msa0410750:CDS | 35.0% |
| ! | TGAGTTGGATCAAGTTCTAT+TGG | - | chr3_2:52488397-52488416 | Msa0410750:intron | 35.0% |
| GATGGTTAAACATCAGTTGT+AGG | + | chr3_2:52488444-52488463 | None:intergenic | 35.0% | |
| TTTGCAGACCTAGAAATTTG+TGG | + | chr3_2:52488466-52488485 | None:intergenic | 35.0% | |
| AATGGAGATAAGAAAACTGC+TGG | - | chr3_2:52488755-52488774 | Msa0410750:intron | 35.0% | |
| ATACAACTGCAGAGTAAAAG+AGG | + | chr3_2:52488919-52488938 | None:intergenic | 35.0% | |
| GTATATAAAGGAAGATGCGT+TGG | - | chr3_2:52488935-52488954 | Msa0410750:intron | 35.0% | |
| ! | TTGCTACCTTCTCAATTTTG+AGG | - | chr3_2:52489013-52489032 | Msa0410750:intron | 35.0% |
| AGTATCAAACGAAGAAATGC+GGG | + | chr3_2:52489054-52489073 | None:intergenic | 35.0% | |
| GCAGAAGAAATAGCTAAATC+TGG | - | chr3_2:52489145-52489164 | Msa0410750:intron | 35.0% | |
| ACATGCAAACCATATAGAAG+TGG | + | chr3_2:52489275-52489294 | None:intergenic | 35.0% | |
| ! | ATGGTTTGCATGTGTACTTA+TGG | - | chr3_2:52489282-52489301 | Msa0410750:intron | 35.0% |
| TTGTTTGTGTACAGCTATGA+AGG | + | chr3_2:52489405-52489424 | None:intergenic | 35.0% | |
| CAACCCATATTCTCGATATT+TGG | + | chr3_2:52489529-52489548 | None:intergenic | 35.0% | |
| TTCAACTGTTCATCAGAACA+GGG | + | chr3_2:52489962-52489981 | None:intergenic | 35.0% | |
| ATTCAACTGTTCATCAGAAC+AGG | + | chr3_2:52489963-52489982 | None:intergenic | 35.0% | |
| AAGCTATCCTGAGAAACTTA+TGG | - | chr3_2:52490082-52490101 | Msa0410750:intron | 35.0% | |
| ! | TTTGCAAGAGAATTTAGGGT+AGG | + | chr3_2:52490215-52490234 | None:intergenic | 35.0% |
| !! | ACAGTTGATGAGAAAGTCAA+CGG | - | chr3_2:52490276-52490295 | Msa0410750:intron | 35.0% |
| CATCTTTCACCAGAATATAC+AGG | - | chr3_2:52490427-52490446 | Msa0410750:intron | 35.0% | |
| GTGTATGAACCTGTATATTC+TGG | + | chr3_2:52490439-52490458 | None:intergenic | 35.0% | |
| TCTCAACAACATTGATGCTT+AGG | - | chr3_2:52490464-52490483 | Msa0410750:intron | 35.0% | |
| TAACAGGTAACTCTGTTGAT+AGG | + | chr3_2:52490624-52490643 | None:intergenic | 35.0% | |
| ACAAATCTTCCTTATAAGGG+TGG | - | chr3_2:52490742-52490761 | Msa0410750:intron | 35.0% | |
| !! | TTTTTAGCACCACCCTTATA+AGG | + | chr3_2:52490754-52490773 | None:intergenic | 35.0% |
| ! | ATAAGGGTGGTGCTAAAAAA+TGG | - | chr3_2:52490755-52490774 | Msa0410750:intron | 35.0% |
| GTGCGATGCAAAAACTTACT+AGG | + | chr3_2:52483656-52483675 | None:intergenic | 40.0% | |
| !!! | CTCTCGGTGTCAATTTTGAT+AGG | - | chr3_2:52484031-52484050 | Msa0410750:CDS | 40.0% |
| GAATTGGAGTGTAGATGACA+TGG | - | chr3_2:52484127-52484146 | Msa0410750:intron | 40.0% | |
| GCCAACAAGAAAGTAAACCT+AGG | - | chr3_2:52484251-52484270 | Msa0410750:intron | 40.0% | |
| ! | AAAGTAAACCTAGGTTGGGT+TGG | - | chr3_2:52484260-52484279 | Msa0410750:intron | 40.0% |
| ! | AAGTAAACCTAGGTTGGGTT+GGG | - | chr3_2:52484261-52484280 | Msa0410750:intron | 40.0% |
| ! | CCTTACAAGCCTGTTTTGTA+TGG | + | chr3_2:52484297-52484316 | None:intergenic | 40.0% |
| CCATACAAAACAGGCTTGTA+AGG | - | chr3_2:52484294-52484313 | Msa0410750:intron | 40.0% | |
| CAAAACAGGCTTGTAAGGTA+AGG | - | chr3_2:52484299-52484318 | Msa0410750:intron | 40.0% | |
| TGTGAAGGTTGGAAAATTGG+AGG | - | chr3_2:52484451-52484470 | Msa0410750:intron | 40.0% | |
| CTTAAAGGTAGAATGTGAGC+AGG | - | chr3_2:52484492-52484511 | Msa0410750:intron | 40.0% | |
| AATTCTTATCTCACTAGGCG+AGG | + | chr3_2:52484619-52484638 | None:intergenic | 40.0% | |
| ! | GTTGTTGTTATTGTTGGTGG+TGG | - | chr3_2:52484640-52484659 | Msa0410750:intron | 40.0% |
| TAGGGACATTGCAATATGCA+GGG | - | chr3_2:52484870-52484889 | Msa0410750:intron | 40.0% | |
| GGCTAGAATTTCAACCCTTA+AGG | + | chr3_2:52484930-52484949 | None:intergenic | 40.0% | |
| GGGTTGAAATTCTAGCCATT+AGG | - | chr3_2:52484933-52484952 | Msa0410750:intron | 40.0% | |
| ATACCACTCGAACTATCAAC+CGG | + | chr3_2:52485047-52485066 | None:intergenic | 40.0% | |
| TGGCGTATACTAGAATTGGA+AGG | - | chr3_2:52485188-52485207 | Msa0410750:intron | 40.0% | |
| !! | AATTGAGCCACTTGATGATG+AGG | - | chr3_2:52485254-52485273 | Msa0410750:CDS | 40.0% |
| GGTACCAAGTATTTGATCTG+CGG | - | chr3_2:52485299-52485318 | Msa0410750:CDS | 40.0% | |
| GTACCAAGTATTTGATCTGC+GGG | - | chr3_2:52485300-52485319 | Msa0410750:CDS | 40.0% | |
| ATTCCCGCAGATCAAATACT+TGG | + | chr3_2:52485306-52485325 | None:intergenic | 40.0% | |
| AATGAGCTCAAATCTGTAGG+AGG | - | chr3_2:52485323-52485342 | Msa0410750:intron | 40.0% | |
| TACTTGCCCATTCTATGTCA+GGG | + | chr3_2:52485371-52485390 | None:intergenic | 40.0% | |
| TTACTTGCCCATTCTATGTC+AGG | + | chr3_2:52485372-52485391 | None:intergenic | 40.0% | |
| TGGGCAAGTAAGCATATACT+TGG | - | chr3_2:52485381-52485400 | Msa0410750:intron | 40.0% | |
| GGGCAAGTAAGCATATACTT+GGG | - | chr3_2:52485382-52485401 | Msa0410750:intron | 40.0% | |
| GGCAAGTAAGCATATACTTG+GGG | - | chr3_2:52485383-52485402 | Msa0410750:intron | 40.0% | |
| CCATTAAACTGGACATGAAG+GGG | - | chr3_2:52485425-52485444 | Msa0410750:intron | 40.0% | |
| CATTAAACTGGACATGAAGG+GGG | - | chr3_2:52485426-52485445 | Msa0410750:intron | 40.0% | |
| TACAAGCAATCCCAGAATTG+TGG | + | chr3_2:52485475-52485494 | None:intergenic | 40.0% | |
| CTTGTAGACAAGTCACTACT+CGG | - | chr3_2:52485489-52485508 | Msa0410750:CDS | 40.0% | |
| TCTAATCATGAGGGAATACC+CGG | - | chr3_2:52485598-52485617 | Msa0410750:intron | 40.0% | |
| !! | GTTTTGGCCTAACCCTAATT+TGG | + | chr3_2:52485638-52485657 | None:intergenic | 40.0% |
| ! | GGGTGAGTGACGTTTTTAAT+TGG | + | chr3_2:52485746-52485765 | None:intergenic | 40.0% |
| CAACACTGGTACTCTTTAAG+GGG | - | chr3_2:52485859-52485878 | Msa0410750:intron | 40.0% | |
| ! | AACACTGGTACTCTTTAAGG+GGG | - | chr3_2:52485860-52485879 | Msa0410750:intron | 40.0% |
| ! | AACTTAGGATAACCGACTCA+CGG | + | chr3_2:52486130-52486149 | None:intergenic | 40.0% |
| ACAGTGCACGTAAACATTGA+AGG | - | chr3_2:52486307-52486326 | Msa0410750:intron | 40.0% | |
| GATAGGAAGAGGCTAATCTT+TGG | + | chr3_2:52486509-52486528 | None:intergenic | 40.0% | |
| AGAACGCAATCTATGCAAAC+TGG | - | chr3_2:52486570-52486589 | Msa0410750:intron | 40.0% | |
| TCGTCTTCTGAGTCTATAGA+TGG | + | chr3_2:52486651-52486670 | None:intergenic | 40.0% | |
| TATACCTGTTCACTGGTATG+TGG | + | chr3_2:52486687-52486706 | None:intergenic | 40.0% | |
| ! | GTAAAGGTATACCTGTTCAC+TGG | + | chr3_2:52486694-52486713 | None:intergenic | 40.0% |
| AGAAGAAAAGTGGGGAAGAA+CGG | + | chr3_2:52486830-52486849 | None:intergenic | 40.0% | |
| GATCTAGATCCTGACTACAT+TGG | + | chr3_2:52487064-52487083 | None:intergenic | 40.0% | |
| TCAGGATCTAGATCCTACAT+AGG | - | chr3_2:52487070-52487089 | Msa0410750:intron | 40.0% | |
| ! | AGATCCTACATAGGATTGGT+TGG | - | chr3_2:52487079-52487098 | Msa0410750:intron | 40.0% |
| ACGTAACACGGTTTGTAAGT+AGG | - | chr3_2:52487113-52487132 | Msa0410750:intron | 40.0% | |
| ACACGGTTTGTAAGTAGGAT+CGG | - | chr3_2:52487118-52487137 | Msa0410750:intron | 40.0% | |
| GGAAAAACAGCGAAAAACAG+TGG | - | chr3_2:52487257-52487276 | Msa0410750:intron | 40.0% | |
| GCGAAAAACAGTGGAAACAA+TGG | - | chr3_2:52487266-52487285 | Msa0410750:intron | 40.0% | |
| GAAAAATCAACCAGAAGGGA+TGG | - | chr3_2:52487453-52487472 | Msa0410750:intron | 40.0% | |
| !!! | GGTGTTCAGTTTTTGGAACT+TGG | + | chr3_2:52487484-52487503 | None:intergenic | 40.0% |
| TCTTCCCCATTTGCCAAAAA+AGG | + | chr3_2:52487619-52487638 | None:intergenic | 40.0% | |
| AAGAGAGCTTCTTGAATCTG+TGG | - | chr3_2:52487635-52487654 | Msa0410750:intron | 40.0% | |
| TGGCTCAGAGTTCATAACAA+AGG | - | chr3_2:52487655-52487674 | Msa0410750:intron | 40.0% | |
| !! | TTTTGAGGAACCGATTTTGC+TGG | + | chr3_2:52487954-52487973 | None:intergenic | 40.0% |
| ! | AAATCGGTTCCTCAAAAGAC+AGG | - | chr3_2:52487957-52487976 | Msa0410750:CDS | 40.0% |
| AAAGATACTAGACCCTTGGT+TGG | - | chr3_2:52488152-52488171 | Msa0410750:intron | 40.0% | |
| ACAGGAAAACGTCATATGAG+TGG | - | chr3_2:52488332-52488351 | Msa0410750:intron | 40.0% | |
| GGATCAGCAATCAACAACTA+TGG | + | chr3_2:52488423-52488442 | None:intergenic | 40.0% | |
| CAGACCTAGAAATTTGTGGA+TGG | + | chr3_2:52488462-52488481 | None:intergenic | 40.0% | |
| AAGGCAAAAGCTAGCTCAAA+GGG | + | chr3_2:52488592-52488611 | None:intergenic | 40.0% | |
| AAAGGCAAAAGCTAGCTCAA+AGG | + | chr3_2:52488593-52488612 | None:intergenic | 40.0% | |
| !!! | TTGAGCTAGCTTTTGCCTTT+TGG | - | chr3_2:52488593-52488612 | Msa0410750:intron | 40.0% |
| ! | TCTGTCACGGTGATAGTTTT+AGG | + | chr3_2:52488718-52488737 | None:intergenic | 40.0% |
| GAGATAAGAAAACTGCTGGA+CGG | - | chr3_2:52488759-52488778 | Msa0410750:intron | 40.0% | |
| CTCTACGTCATGCTGATATA+TGG | - | chr3_2:52488827-52488846 | Msa0410750:intron | 40.0% | |
| ! | AATGTTATCTCTTTGGAGGC+AGG | - | chr3_2:52489108-52489127 | Msa0410750:intron | 40.0% |
| !! | AGCTATTTCTTCTGCTAGTC+TGG | + | chr3_2:52489140-52489159 | None:intergenic | 40.0% |
| GCTAAATCTGGTATTCCAGA+AGG | - | chr3_2:52489157-52489176 | Msa0410750:intron | 40.0% | |
| TTGATCTTCCTTGAACCTTC+TGG | + | chr3_2:52489175-52489194 | None:intergenic | 40.0% | |
| GAAGGTTCAAGGAAGATCAA+CGG | - | chr3_2:52489175-52489194 | Msa0410750:intron | 40.0% | |
| TGCAAACCATATAGAAGTGG+TGG | + | chr3_2:52489272-52489291 | None:intergenic | 40.0% | |
| ACAACGGAGTTGCATCAATA+AGG | + | chr3_2:52489377-52489396 | None:intergenic | 40.0% | |
| !! | GCAAATAAAGGGTGTTGATG+CGG | - | chr3_2:52489433-52489452 | Msa0410750:intron | 40.0% |
| ! | AAAGGAGGTAGCCGTATTTT+GGG | - | chr3_2:52489463-52489482 | Msa0410750:intron | 40.0% |
| !! | CATTTTTGAGGGGTGAATGT+GGG | + | chr3_2:52489723-52489742 | None:intergenic | 40.0% |
| !! | ACATTTTTGAGGGGTGAATG+TGG | + | chr3_2:52489724-52489743 | None:intergenic | 40.0% |
| ! | AGGACGTCATGTTGTTTGAT+GGG | + | chr3_2:52489840-52489859 | None:intergenic | 40.0% |
| ! | AAGGACGTCATGTTGTTTGA+TGG | + | chr3_2:52489841-52489860 | None:intergenic | 40.0% |
| CATCAGAGTGTGCAAGTTAT+GGG | - | chr3_2:52490376-52490395 | Msa0410750:intron | 40.0% | |
| TCAACAGAGTTACCTGTTAC+TGG | - | chr3_2:52490625-52490644 | Msa0410750:intron | 40.0% | |
| AGTTACCTGTTACTGGTGAA+GGG | - | chr3_2:52490632-52490651 | Msa0410750:intron | 40.0% | |
| ! | GGTCTCGGATTCGAATTTTC+AGG | + | chr3_2:52483840-52483859 | None:intergenic | 45.0% |
| GTGTGCTCATCTATAGGTCT+CGG | + | chr3_2:52483855-52483874 | None:intergenic | 45.0% | |
| ACCTATAGATGAGCACACTC+CGG | - | chr3_2:52483857-52483876 | Msa0410750:CDS | 45.0% | |
| GTGTGTTAACCCACTTGGAT+TGG | - | chr3_2:52483947-52483966 | Msa0410750:intron | 45.0% | |
| GCATTCAATCCCTCATGGTT+AGG | + | chr3_2:52484218-52484237 | None:intergenic | 45.0% | |
| AACCATGAGGGATTGAATGC+TGG | - | chr3_2:52484218-52484237 | Msa0410750:intron | 45.0% | |
| ACCATGAGGGATTGAATGCT+GGG | - | chr3_2:52484219-52484238 | Msa0410750:intron | 45.0% | |
| GGCTTGTAAGGTAAGGTGAA+TGG | - | chr3_2:52484306-52484325 | Msa0410750:intron | 45.0% | |
| TGGTAGAGTCGTGTCTTAAG+TGG | - | chr3_2:52484394-52484413 | Msa0410750:intron | 45.0% | |
| !! | GTTATTGTTGGTGGTGGTTC+TGG | - | chr3_2:52484646-52484665 | Msa0410750:intron | 45.0% |
| TAACGCAGAGGTTCCTTCAA+TGG | - | chr3_2:52484701-52484720 | Msa0410750:intron | 45.0% | |
| GTAGGGACATTGCAATATGC+AGG | - | chr3_2:52484869-52484888 | Msa0410750:intron | 45.0% | |
| TCTCTGATCACGTAGCCTAA+TGG | + | chr3_2:52484951-52484970 | None:intergenic | 45.0% | |
| GTGAATCACTGGATCTTGTC+TGG | - | chr3_2:52485160-52485179 | Msa0410750:intron | 45.0% | |
| CTGGATCTTGTCTGGAGAAT+TGG | - | chr3_2:52485168-52485187 | Msa0410750:intron | 45.0% | |
| TGGTACCGTACAATTGTGAC+AGG | + | chr3_2:52485286-52485305 | None:intergenic | 45.0% | |
| GGGAATGAGCTCAAATCTGT+AGG | - | chr3_2:52485320-52485339 | Msa0410750:intron | 45.0% | |
| CCCCTTCATGTCCAGTTTAA+TGG | + | chr3_2:52485428-52485447 | None:intergenic | 45.0% | |
| AGCAATCCCAGAATTGTGGA+TGG | + | chr3_2:52485471-52485490 | None:intergenic | 45.0% | |
| CTAACCCTAATTTGGGTGCA+AGG | + | chr3_2:52485630-52485649 | None:intergenic | 45.0% | |
| CTTGCACCCAAATTAGGGTT+AGG | - | chr3_2:52485628-52485647 | Msa0410750:intron | 45.0% | |
| TTATAAGCGTCCCTTCCCTA+GGG | + | chr3_2:52485660-52485679 | None:intergenic | 45.0% | |
| TTTATAAGCGTCCCTTCCCT+AGG | + | chr3_2:52485661-52485680 | None:intergenic | 45.0% | |
| AGGGAAGGGACGCTTATAAA+AGG | - | chr3_2:52485661-52485680 | Msa0410750:intron | 45.0% | |
| TAGGTCACTGTCTCTGTTCA+GGG | + | chr3_2:52485766-52485785 | None:intergenic | 45.0% | |
| TCGTCTGAAAACACGAGTCT+AGG | + | chr3_2:52485785-52485804 | None:intergenic | 45.0% | |
| ! | TAGACTCGTGTTTTCAGACG+AGG | - | chr3_2:52485784-52485803 | Msa0410750:intron | 45.0% |
| ! | ACTCTTTAAGGGGGCACAAA+TGG | - | chr3_2:52485869-52485888 | Msa0410750:intron | 45.0% |
| ! | TAGGTGTCATCTAGAAGCTC+AGG | - | chr3_2:52486389-52486408 | Msa0410750:intron | 45.0% |
| ! | AGGTGTCATCTAGAAGCTCA+GGG | - | chr3_2:52486390-52486409 | Msa0410750:intron | 45.0% |
| AGGAAGAGGCTAATCTTTGG+AGG | + | chr3_2:52486506-52486525 | None:intergenic | 45.0% | |
| CACGGCAGTAAGAGTTTGAT+AGG | + | chr3_2:52486526-52486545 | None:intergenic | 45.0% | |
| TTACTGCCGTGTATCGAAGA+AGG | - | chr3_2:52486535-52486554 | Msa0410750:CDS | 45.0% | |
| AAACGGCCTTCTTCGATACA+CGG | + | chr3_2:52486544-52486563 | None:intergenic | 45.0% | |
| ACAACCACATACCAGTGAAC+AGG | - | chr3_2:52486680-52486699 | Msa0410750:intron | 45.0% | |
| GGTTTGTAAGTAGGATCGGT+AGG | - | chr3_2:52487122-52487141 | Msa0410750:intron | 45.0% | |
| TCTTACGACTCTACATCCCA+CGG | + | chr3_2:52487341-52487360 | None:intergenic | 45.0% | |
| GTGTAAAGAGCAATGTAGCC+AGG | + | chr3_2:52487392-52487411 | None:intergenic | 45.0% | |
| GTGAAGCCAACCAGCAAAAT+CGG | - | chr3_2:52487941-52487960 | Msa0410750:CDS | 45.0% | |
| ! | ACACACACACCTGTCTTTTG+AGG | + | chr3_2:52487969-52487988 | None:intergenic | 45.0% |
| CGTCATATGAGTGGATAGCT+TGG | - | chr3_2:52488341-52488360 | Msa0410750:intron | 45.0% | |
| CTTAAGGCTTGACATCTGCA+GGG | + | chr3_2:52488494-52488513 | None:intergenic | 45.0% | |
| GCCTGTTAGAACTCTCACTT+TGG | - | chr3_2:52488526-52488545 | Msa0410750:intron | 45.0% | |
| ! | GCCAAAGTGAGAGTTCTAAC+AGG | + | chr3_2:52488530-52488549 | None:intergenic | 45.0% |
| !!! | TTGCCTTTTGGTGTTGAGAG+CGG | - | chr3_2:52488605-52488624 | Msa0410750:intron | 45.0% |
| GGAAGCTACTCTATCTGTCA+CGG | + | chr3_2:52488731-52488750 | None:intergenic | 45.0% | |
| AAGAAAACTGCTGGACGGAT+TGG | - | chr3_2:52488764-52488783 | Msa0410750:intron | 45.0% | |
| ! | AGAAAACTGCTGGACGGATT+GGG | - | chr3_2:52488765-52488784 | Msa0410750:intron | 45.0% |
| TGTCTTAGAGCTCGAAGTTC+AGG | - | chr3_2:52488980-52488999 | Msa0410750:intron | 45.0% | |
| CTGGTATTCCAGAAGGTTCA+AGG | - | chr3_2:52489164-52489183 | Msa0410750:intron | 45.0% | |
| AGCTATGAAGGCGACAACAA+CGG | + | chr3_2:52489393-52489412 | None:intergenic | 45.0% | |
| TGTTGATGCGGCACAATCAA+AGG | - | chr3_2:52489445-52489464 | Msa0410750:intron | 45.0% | |
| ! | CAAAGGAGGTAGCCGTATTT+TGG | - | chr3_2:52489462-52489481 | Msa0410750:intron | 45.0% |
| ! | TGGGTTGAAACTTTGTGCCA+TGG | - | chr3_2:52489542-52489561 | Msa0410750:intron | 45.0% |
| GGGTTGAAACTTTGTGCCAT+GGG | - | chr3_2:52489543-52489562 | Msa0410750:intron | 45.0% | |
| GGTTGAAACTTTGTGCCATG+GGG | - | chr3_2:52489544-52489563 | Msa0410750:intron | 45.0% | |
| CAAGCAAAACATAGTCCCCA+TGG | + | chr3_2:52489562-52489581 | None:intergenic | 45.0% | |
| GCACACTCTGATGGAAACAA+AGG | + | chr3_2:52490369-52490388 | None:intergenic | 45.0% | |
| ! | CCATAACTTGCACACTCTGA+TGG | + | chr3_2:52490378-52490397 | None:intergenic | 45.0% |
| CCATCAGAGTGTGCAAGTTA+TGG | - | chr3_2:52490375-52490394 | Msa0410750:intron | 45.0% | |
| ! | CAAGTTATGGGCAGCTTTGA+TGG | - | chr3_2:52490388-52490407 | Msa0410750:intron | 45.0% |
| ! | TTATGGGCAGCTTTGATGGT+TGG | - | chr3_2:52490392-52490411 | Msa0410750:intron | 45.0% |
| ! | AGCTTTGATGGTTGGAGTCA+AGG | - | chr3_2:52490400-52490419 | Msa0410750:intron | 45.0% |
| ACAACATTGATGCTTAGGCC+AGG | - | chr3_2:52490469-52490488 | Msa0410750:intron | 45.0% | |
| GAGTTACCTGTTACTGGTGA+AGG | - | chr3_2:52490631-52490650 | Msa0410750:intron | 45.0% | |
| GTTAACCCTTCACCAGTAAC+AGG | + | chr3_2:52490640-52490659 | None:intergenic | 45.0% | |
| !! | TAATTATGAATATTATATTT+GGG | + | chr3_2:52488636-52488655 | None:intergenic | 5.0% |
| !! | ATAATTATGAATATTATATT+TGG | + | chr3_2:52488637-52488656 | None:intergenic | 5.0% |
| !!! | AATGTTTTTTTTTTTTTTTA+AGG | - | chr3_2:52489739-52489758 | Msa0410750:intron | 5.0% |
| !!! | ATGTTTTTTTTTTTTTTTAA+GGG | - | chr3_2:52489740-52489759 | Msa0410750:intron | 5.0% |
| TCCGGAGTGTGCTCATCTAT+AGG | + | chr3_2:52483861-52483880 | None:intergenic | 50.0% | |
| TTCGCGTAGGCTTTCAACTC+CGG | + | chr3_2:52483879-52483898 | None:intergenic | 50.0% | |
| ! | AAGGGTTTGCTTGTTCGCGT+AGG | + | chr3_2:52483892-52483911 | None:intergenic | 50.0% |
| GGTCTCAGGTTCGATTCTCT+CGG | - | chr3_2:52484015-52484034 | Msa0410750:CDS | 50.0% | |
| ACCCAGCATTCAATCCCTCA+TGG | + | chr3_2:52484223-52484242 | None:intergenic | 50.0% | |
| ATGAGGGATTGAATGCTGGG+TGG | - | chr3_2:52484222-52484241 | Msa0410750:intron | 50.0% | |
| ! | CTGGTGAAGTGGTCGATTTC+TGG | - | chr3_2:52484665-52484684 | Msa0410750:intron | 50.0% |
| GACATTGCAATATGCAGGGC+CGG | - | chr3_2:52484874-52484893 | Msa0410750:intron | 50.0% | |
| ACATTGCAATATGCAGGGCC+GGG | - | chr3_2:52484875-52484894 | Msa0410750:intron | 50.0% | |
| GGAATCCCAAGTTTGAACCC+CGG | + | chr3_2:52484896-52484915 | None:intergenic | 50.0% | |
| !! | TGTCCGGTTGATAGTTCGAG+TGG | - | chr3_2:52485041-52485060 | Msa0410750:intron | 50.0% |
| GAGCTCAAATCTGTAGGAGG+AGG | - | chr3_2:52485326-52485345 | Msa0410750:intron | 50.0% | |
| AGAGCGACCATCCACAATTC+TGG | - | chr3_2:52485461-52485480 | Msa0410750:intron | 50.0% | |
| GAGCGACCATCCACAATTCT+GGG | - | chr3_2:52485462-52485481 | Msa0410750:intron | 50.0% | |
| ACTACTCGGTCATGCGAGAT+AGG | - | chr3_2:52485503-52485522 | Msa0410750:CDS | 50.0% | |
| CTACTCGGTCATGCGAGATA+GGG | - | chr3_2:52485504-52485523 | Msa0410750:CDS | 50.0% | |
| CATGCGAGATAGGGAGCTAT+CGG | - | chr3_2:52485513-52485532 | Msa0410750:intron | 50.0% | |
| AATCATGAGGGAATACCCGG+TGG | - | chr3_2:52485601-52485620 | Msa0410750:intron | 50.0% | |
| ATCATGAGGGAATACCCGGT+GGG | - | chr3_2:52485602-52485621 | Msa0410750:intron | 50.0% | |
| GGGACCTTGCACCCAAATTA+GGG | - | chr3_2:52485623-52485642 | Msa0410750:intron | 50.0% | |
| TAGGGTTAGGCCAAAACCCT+AGG | - | chr3_2:52485641-52485660 | Msa0410750:intron | 50.0% | |
| AGGGTTAGGCCAAAACCCTA+GGG | - | chr3_2:52485642-52485661 | Msa0410750:intron | 50.0% | |
| TTAGGCCAAAACCCTAGGGA+AGG | - | chr3_2:52485646-52485665 | Msa0410750:intron | 50.0% | |
| TAGGCCAAAACCCTAGGGAA+GGG | - | chr3_2:52485647-52485666 | Msa0410750:intron | 50.0% | |
| CTAGGTCACTGTCTCTGTTC+AGG | + | chr3_2:52485767-52485786 | None:intergenic | 50.0% | |
| ! | GGTGTCATCTAGAAGCTCAG+GGG | - | chr3_2:52486391-52486410 | Msa0410750:intron | 50.0% |
| TTCAGGGACGCGACATTACA+TGG | + | chr3_2:52486471-52486490 | None:intergenic | 50.0% | |
| TCGCGTCCCTGAATTCTAGA+CGG | - | chr3_2:52486478-52486497 | Msa0410750:intron | 50.0% | |
| ! | GAGGTCCCGTCTAGAATTCA+GGG | + | chr3_2:52486487-52486506 | None:intergenic | 50.0% |
| !! | CCTACATAGGATTGGTTGGC+CGG | - | chr3_2:52487083-52487102 | Msa0410750:intron | 50.0% |
| ACCGTGTTACGTTCCTTCAC+CGG | + | chr3_2:52487105-52487124 | None:intergenic | 50.0% | |
| AGCAAAAACGAACCGGAGTG+AGG | - | chr3_2:52487296-52487315 | Msa0410750:intron | 50.0% | |
| CAGGATCAAGGATCTAGTGC+TGG | + | chr3_2:52487373-52487392 | None:intergenic | 50.0% | |
| CAGCACTAGATCCTTGATCC+TGG | - | chr3_2:52487371-52487390 | Msa0410750:intron | 50.0% | |
| GAGCAATGTAGCCAGGATCA+AGG | + | chr3_2:52487385-52487404 | None:intergenic | 50.0% | |
| CTTGGCTAAACCATCCCTTC+TGG | + | chr3_2:52487466-52487485 | None:intergenic | 50.0% | |
| !! | GAGGAACCGATTTTGCTGGT+TGG | + | chr3_2:52487950-52487969 | None:intergenic | 50.0% |
| GCTTAAGGCTTGACATCTGC+AGG | + | chr3_2:52488495-52488514 | None:intergenic | 50.0% | |
| TCAAGCCTTAAGCACGAGAG+AGG | - | chr3_2:52488502-52488521 | Msa0410750:intron | 50.0% | |
| AGTCCGCTCTCAACACCAAA+AGG | + | chr3_2:52488611-52488630 | None:intergenic | 50.0% | |
| ! | ATCTCTTTGGAGGCAGGCTT+TGG | - | chr3_2:52489114-52489133 | Msa0410750:intron | 50.0% |
| TGATGCGGCACAATCAAAGG+AGG | - | chr3_2:52489448-52489467 | Msa0410750:intron | 50.0% | |
| !! | GAGGTAGCCGTATTTTGGGT+CGG | - | chr3_2:52489467-52489486 | Msa0410750:intron | 50.0% |
| AGCCATGCCGACCCAAAATA+CGG | + | chr3_2:52489477-52489496 | None:intergenic | 50.0% | |
| !! | CGTATCGGCTAACACAAGCA+AGG | + | chr3_2:52489860-52489879 | None:intergenic | 50.0% |
| CATTGATGCTTAGGCCAGGA+AGG | - | chr3_2:52490473-52490492 | Msa0410750:intron | 50.0% | |
| CGCGAACAAGCAAACCCTTG+AGG | - | chr3_2:52483893-52483912 | Msa0410750:intron | 55.0% | |
| !! | GCGTAACTGGCGTTGGCTTT+GGG | - | chr3_2:52483977-52483996 | Msa0410750:CDS | 55.0% |
| ! | TTTGGGACCTTGGAGTGTGC+TGG | - | chr3_2:52483994-52484013 | Msa0410750:CDS | 55.0% |
| AGTTAGGCCCAACCCAACCT+AGG | + | chr3_2:52484271-52484290 | None:intergenic | 55.0% | |
| !! | TGGTGGTGGTTCTGGTGAAG+TGG | - | chr3_2:52484654-52484673 | Msa0410750:intron | 55.0% |
| CGCAGAGGTTCCTTCAATGG+TGG | - | chr3_2:52484704-52484723 | Msa0410750:intron | 55.0% | |
| CATTGCAATATGCAGGGCCG+GGG | - | chr3_2:52484876-52484895 | Msa0410750:intron | 55.0% | |
| TCATGAGGGAATACCCGGTG+GGG | - | chr3_2:52485603-52485622 | Msa0410750:intron | 55.0% | |
| GGGGACCTTGCACCCAAATT+AGG | - | chr3_2:52485622-52485641 | Msa0410750:intron | 55.0% | |
| CGCGTCCCTGAATTCTAGAC+GGG | - | chr3_2:52486479-52486498 | Msa0410750:intron | 55.0% | |
| ! | GGAGGTCCCGTCTAGAATTC+AGG | + | chr3_2:52486488-52486507 | None:intergenic | 55.0% |
| CCGGCCAACCAATCCTATGT+AGG | + | chr3_2:52487086-52487105 | None:intergenic | 55.0% | |
| !! | TAGGATTGGTTGGCCGGTGA+AGG | - | chr3_2:52487089-52487108 | Msa0410750:intron | 55.0% |
| GCCGGTGAAGGAACGTAACA+CGG | - | chr3_2:52487101-52487120 | Msa0410750:intron | 55.0% | |
| !! | AGGATCTAGTGCTGGCTCGT+AGG | + | chr3_2:52487365-52487384 | None:intergenic | 55.0% |
| AGGCACCTCTCTCGTGCTTA+AGG | + | chr3_2:52488510-52488529 | None:intergenic | 55.0% | |
| ! | CGGATTGGGAACAGCCTTAG+TGG | - | chr3_2:52488779-52488798 | Msa0410750:intron | 55.0% |
| !! | AGCCGTATTTTGGGTCGGCA+TGG | - | chr3_2:52489472-52489491 | Msa0410750:intron | 55.0% |
| !! | ATTTTGGGTCGGCATGGCTG+AGG | - | chr3_2:52489478-52489497 | Msa0410750:intron | 55.0% |
| TGAGGGGTGAATGTGGGAGA+AGG | + | chr3_2:52489717-52489736 | None:intergenic | 55.0% | |
| !! | ACCCACTTGGATTGGCCCGA+TGG | - | chr3_2:52483955-52483974 | Msa0410750:intron | 60.0% |
| GCCATCGGGCCAATCCAAGT+GGG | + | chr3_2:52483959-52483978 | None:intergenic | 60.0% | |
| ! | GATTGGCCCGATGGCGTAAC+TGG | - | chr3_2:52483964-52483983 | Msa0410750:intron | 60.0% |
| CCAACGCCAGTTACGCCATC+GGG | + | chr3_2:52483973-52483992 | None:intergenic | 60.0% | |
| GCCAACGCCAGTTACGCCAT+CGG | + | chr3_2:52483974-52483993 | None:intergenic | 60.0% | |
| !! | GGCGTAACTGGCGTTGGCTT+TGG | - | chr3_2:52483976-52483995 | Msa0410750:CDS | 60.0% |
| !! | TGGCGTTGGCTTTGGGACCT+TGG | - | chr3_2:52483984-52484003 | Msa0410750:CDS | 60.0% |
| CCTGAGACCAGCACACTCCA+AGG | + | chr3_2:52484004-52484023 | None:intergenic | 60.0% | |
| ! | CCTTGGAGTGTGCTGGTCTC+AGG | - | chr3_2:52484001-52484020 | Msa0410750:CDS | 60.0% |
| CAGGGCCGGGGTTCAAACTT+GGG | - | chr3_2:52484888-52484907 | Msa0410750:intron | 60.0% | |
| TTTGGGTGCAAGGTCCCCAC+CGG | + | chr3_2:52485620-52485639 | None:intergenic | 60.0% | |
| ! | GCGTCCCTTCCCTAGGGTTT+TGG | + | chr3_2:52485654-52485673 | None:intergenic | 60.0% |
| ACCGGAGTGAGGTCGAAGCA+CGG | - | chr3_2:52487307-52487326 | Msa0410750:intron | 60.0% | |
| ACCGTGCTTCGACCTCACTC+CGG | + | chr3_2:52487311-52487330 | None:intergenic | 60.0% | |
| GTGAGGTCGAAGCACGGTTG+AGG | - | chr3_2:52487313-52487332 | Msa0410750:intron | 60.0% | |
| !! | AAGCACGGTTGAGGTGCCGT+GGG | - | chr3_2:52487322-52487341 | Msa0410750:intron | 60.0% |
| CGCCATCGGGCCAATCCAAG+TGG | + | chr3_2:52483960-52483979 | None:intergenic | 65.0% | |
| CCCGATGGCGTAACTGGCGT+TGG | - | chr3_2:52483970-52483989 | Msa0410750:CDS | 65.0% | |
| GCAGGGCCGGGGTTCAAACT+TGG | - | chr3_2:52484887-52484906 | Msa0410750:intron | 65.0% | |
| TTGGGTGCAAGGTCCCCACC+GGG | + | chr3_2:52485619-52485638 | None:intergenic | 65.0% | |
| !! | GAAGCACGGTTGAGGTGCCG+TGG | - | chr3_2:52487321-52487340 | Msa0410750:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 52483588 | 52490876 | 52483588 | ID=Msa0410750;Name=Msa0410750 |
| chr3_2 | mRNA | 52483588 | 52490876 | 52483588 | ID=Msa0410750-mRNA-1;Parent=Msa0410750;Name=Msa0410750-mRNA-1;_AED=0.12;_eAED=0.12;_QI=85|1|1|1|0.87|0.77|9|189|300 |
| chr3_2 | exon | 52483588 | 52483879 | 52483588 | ID=Msa0410750-mRNA-1:exon:10434;Parent=Msa0410750-mRNA-1 |
| chr3_2 | exon | 52483970 | 52484082 | 52483970 | ID=Msa0410750-mRNA-1:exon:10433;Parent=Msa0410750-mRNA-1 |
| chr3_2 | exon | 52484965 | 52485053 | 52484965 | ID=Msa0410750-mRNA-1:exon:10432;Parent=Msa0410750-mRNA-1 |
| chr3_2 | exon | 52485229 | 52485334 | 52485229 | ID=Msa0410750-mRNA-1:exon:10431;Parent=Msa0410750-mRNA-1 |
| chr3_2 | exon | 52485463 | 52485531 | 52485463 | ID=Msa0410750-mRNA-1:exon:10430;Parent=Msa0410750-mRNA-1 |
| chr3_2 | exon | 52486486 | 52486575 | 52486486 | ID=Msa0410750-mRNA-1:exon:10429;Parent=Msa0410750-mRNA-1 |
| chr3_2 | exon | 52487763 | 52488072 | 52487763 | ID=Msa0410750-mRNA-1:exon:10428;Parent=Msa0410750-mRNA-1 |
| chr3_2 | exon | 52488180 | 52488218 | 52488180 | ID=Msa0410750-mRNA-1:exon:10427;Parent=Msa0410750-mRNA-1 |
| chr3_2 | exon | 52490808 | 52490876 | 52490808 | ID=Msa0410750-mRNA-1:exon:10426;Parent=Msa0410750-mRNA-1 |
| chr3_2 | five_prime_UTR | 52490808 | 52490876 | 52490808 | ID=Msa0410750-mRNA-1:five_prime_utr;Parent=Msa0410750-mRNA-1 |
| chr3_2 | five_prime_UTR | 52488203 | 52488218 | 52488203 | ID=Msa0410750-mRNA-1:five_prime_utr;Parent=Msa0410750-mRNA-1 |
| chr3_2 | CDS | 52488180 | 52488202 | 52488180 | ID=Msa0410750-mRNA-1:cds;Parent=Msa0410750-mRNA-1 |
| chr3_2 | CDS | 52487763 | 52488072 | 52487763 | ID=Msa0410750-mRNA-1:cds;Parent=Msa0410750-mRNA-1 |
| chr3_2 | CDS | 52486486 | 52486575 | 52486486 | ID=Msa0410750-mRNA-1:cds;Parent=Msa0410750-mRNA-1 |
| chr3_2 | CDS | 52485463 | 52485531 | 52485463 | ID=Msa0410750-mRNA-1:cds;Parent=Msa0410750-mRNA-1 |
| chr3_2 | CDS | 52485229 | 52485334 | 52485229 | ID=Msa0410750-mRNA-1:cds;Parent=Msa0410750-mRNA-1 |
| chr3_2 | CDS | 52484965 | 52485053 | 52484965 | ID=Msa0410750-mRNA-1:cds;Parent=Msa0410750-mRNA-1 |
| chr3_2 | CDS | 52483970 | 52484082 | 52483970 | ID=Msa0410750-mRNA-1:cds;Parent=Msa0410750-mRNA-1 |
| chr3_2 | CDS | 52483777 | 52483879 | 52483777 | ID=Msa0410750-mRNA-1:cds;Parent=Msa0410750-mRNA-1 |
| chr3_2 | three_prime_UTR | 52483588 | 52483776 | 52483588 | ID=Msa0410750-mRNA-1:three_prime_utr;Parent=Msa0410750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
