AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358870 MtrunA17_Chr4g0072501 99.644 281 1 0 1 281 1 281 0.0 546
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358870 AT2G18840.1 80.070 286 47 4 1 281 1 281 2.84e-133 379
Msa1358870 AT4G30260.3 78.596 285 52 3 1 281 1 280 2.68e-126 361
Msa1358870 AT4G30260.1 78.596 285 52 3 1 281 1 280 2.68e-126 361
Msa1358870 AT4G30260.2 78.947 285 51 3 1 281 76 355 2.78e-125 361

Find 94 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGAAGAGAGGAAAGAAAA+AGG 0.200703 tig0016544:+14656 Msa1358870:five_prime_UTR
CTTGGAATTCCCTTCTAAAT+AGG 0.205486 tig0016544:+18539 Msa1358870:three_prime_UTR
CTTTGCGTGATTGGGATCTT+TGG 0.212274 tig0016544:+15206 Msa1358870:CDS
TCTTAGGTCTCACTCTTTCT+TGG 0.230737 tig0016544:+15251 Msa1358870:CDS
GAGGGGTGAGAAGAGGATTT+GGG 0.249482 tig0016544:-14974 None:intergenic
AGAGGGGTGAGAAGAGGATT+TGG 0.272320 tig0016544:-14975 None:intergenic
TTTGCGTGATTGGGATCTTT+GGG 0.284611 tig0016544:+15207 Msa1358870:CDS
GACATTGAATGTCCTGCTTC+TGG 0.295731 tig0016544:+17863 Msa1358870:CDS
CTGGTAAGGCTTTGCGTGAT+TGG 0.311351 tig0016544:+15197 Msa1358870:CDS
CGAGATGGTTGCAGCAAGTT+TGG 0.311945 tig0016544:-18707 None:intergenic
TTACCAGGATCTTCACGATT+AGG 0.314504 tig0016544:-15181 None:intergenic
TACCTTGACTGAACCTGTTT+GGG 0.319249 tig0016544:+15096 Msa1358870:CDS
GAAGAAGGAGGAGGAGGAAG+AGG 0.324483 tig0016544:-15028 None:intergenic
TGACATTGGCGTGGAGCTCT+TGG 0.332939 tig0016544:+18364 Msa1358870:CDS
TACCAGGATCTTCACGATTA+GGG 0.334276 tig0016544:-15180 None:intergenic
TTGGTCTGCTTCTGTCAAAA+AGG 0.353322 tig0016544:+15270 Msa1358870:CDS
ATACCTTGACTGAACCTGTT+TGG 0.358956 tig0016544:+15095 Msa1358870:CDS
GCATTTGCCTTACTTGCTGC+TGG 0.365044 tig0016544:+17828 Msa1358870:CDS
GAAGGAGGAGGAGGAAGAGG+AGG 0.377972 tig0016544:-15025 None:intergenic
AGGGGTGAGAAGAGGATTTG+GGG 0.387373 tig0016544:-14973 None:intergenic
TGGTAAGGCTTTGCGTGATT+GGG 0.399572 tig0016544:+15198 Msa1358870:CDS
CGGGTAGAAGAAGGAGGAGG+AGG 0.413219 tig0016544:-15034 None:intergenic
TGCTTATTCCCTCTTGATGT+TGG 0.413824 tig0016544:+18285 Msa1358870:CDS
CGATCTCGTCGATGTCAGAT+TGG 0.423884 tig0016544:-14820 None:intergenic
ACAGGTTCAGTCAAGGTATT+GGG 0.426001 tig0016544:-15091 None:intergenic
AACCGAGCAGACTCAGACTC+TGG 0.433237 tig0016544:-18260 None:intergenic
GATCTCGTCGATGTCAGATT+GGG 0.440020 tig0016544:-14819 None:intergenic
GACATTGGCGTGGAGCTCTT+GGG 0.445245 tig0016544:+18365 Msa1358870:CDS
AGAGGAGGGAGAGAAGAAGA+AGG 0.446255 tig0016544:-15010 None:intergenic
GGATCTTCACGATTAGGGTT+AGG 0.446271 tig0016544:-15175 None:intergenic
AACAGGTTCAGTCAAGGTAT+TGG 0.450830 tig0016544:-15092 None:intergenic
GAACAATGTTATAGTAAAAG+TGG 0.451640 tig0016544:+18329 Msa1358870:CDS
TTTCAAATTACTAACAATCC+TGG 0.451701 tig0016544:-15140 None:intergenic
GAAGAAGTGGAAGAAGTGAC+GGG 0.456726 tig0016544:-14914 None:intergenic
AAGGAGGAGGAGGAAGAGGA+GGG 0.458852 tig0016544:-15024 None:intergenic
GATATCTCTACCTCCGGATT+CGG 0.458948 tig0016544:+15061 Msa1358870:CDS
GGATGATGCGTGAAGGGGTA+TGG 0.460845 tig0016544:-14798 None:intergenic
GAGGAGGGAGAGAAGAAGAA+GGG 0.465284 tig0016544:-15009 None:intergenic
AGAAGAAGTGGAAGAAGTGA+CGG 0.467329 tig0016544:-14915 None:intergenic
AATCCGGAGGTAGAGATATC+AGG 0.471699 tig0016544:-15058 None:intergenic
CTAAAATTTGGCATTTACAT+TGG 0.472904 tig0016544:+14584 None:intergenic
TACAGCACCAGCAGCAAGTA+AGG 0.473133 tig0016544:-17835 None:intergenic
ATTGAAGCGCGTGGAGGAGA+TGG 0.474354 tig0016544:-14890 None:intergenic
TTTCTCATGTATGTATCTGT+TGG 0.477366 tig0016544:+18453 Msa1358870:CDS
TGGGAGAGAGGGGTGAGAAG+AGG 0.477680 tig0016544:-14981 None:intergenic
ACATTGATGCATTTAGTCAA+TGG 0.480573 tig0016544:-18490 None:intergenic
GGAGGAGATGGTGGACGAGC+AGG 0.480676 tig0016544:-14878 None:intergenic
ATTGGGAGCAGGTCCGAATC+CGG 0.481172 tig0016544:-15074 None:intergenic
AAATCTCATTTACGCTTCTC+CGG 0.482794 tig0016544:+14844 Msa1358870:CDS
CTGTCAAAAGAGATCTCTCC+AGG 0.485149 tig0016544:+15122 Msa1358870:CDS
ATTAATGCACCAACATCAAG+AGG 0.490162 tig0016544:-18294 None:intergenic
CAATCACGCAAAGCCTTACC+AGG 0.493751 tig0016544:-15196 None:intergenic
TTCCAGAGTCTGAGTCTGCT+CGG 0.495796 tig0016544:+18258 Msa1358870:CDS
ACTTTATTCAGATAACTACT+TGG 0.497219 tig0016544:+18521 Msa1358870:three_prime_UTR
GGGTGCAGGATTAGGAAGAT+TGG 0.498637 tig0016544:-14951 None:intergenic
ATTGATGAAAGGAGAAGAAG+TGG 0.504994 tig0016544:-14927 None:intergenic
CGAGCAGGAAGAACGGTGGC+CGG 0.505096 tig0016544:-14863 None:intergenic
AACCCTAATCGTGAAGATCC+TGG 0.505934 tig0016544:+15178 Msa1358870:CDS
CGACCTGATATCTCTACCTC+CGG 0.515376 tig0016544:+15055 Msa1358870:CDS
TGTTATAGTAAAAGTGGTAG+TGG 0.523207 tig0016544:+18335 Msa1358870:CDS
AAGAAAACAATGAAGAAGAA+AGG 0.524288 tig0016544:-15232 None:intergenic
AGGAGGGAGAGAAGAAGAAG+GGG 0.529098 tig0016544:-15008 None:intergenic
TCAGTCAAGGTATTGGGAGC+AGG 0.534017 tig0016544:-15085 None:intergenic
GGAAGATTGGAATTGATGAA+AGG 0.538609 tig0016544:-14938 None:intergenic
ATATCAGGTCGGGTAGAAGA+AGG 0.544326 tig0016544:-15043 None:intergenic
GGGGTGAGAAGAGGATTTGG+GGG 0.544891 tig0016544:-14972 None:intergenic
AAGAGGCTATTACCAGAAGC+AGG 0.553367 tig0016544:-17875 None:intergenic
AATGATTGTATAATATTACA+TGG 0.560624 tig0016544:+18670 Msa1358870:three_prime_UTR
GGAGGTAGAGATATCAGGTC+GGG 0.560800 tig0016544:-15053 None:intergenic
TAATCGTGAAGATCCTGGTA+AGG 0.562164 tig0016544:+15183 Msa1358870:CDS
TTGCGTGATTGGGATCTTTG+GGG 0.563543 tig0016544:+15208 Msa1358870:CDS
GGGTGAGAAGAGGATTTGGG+GGG 0.585558 tig0016544:-14971 None:intergenic
AGGGTAACAAAGAATACGAT+AGG 0.592932 tig0016544:-18582 None:intergenic
TGGTGGACGAGCAGGAAGAA+CGG 0.593661 tig0016544:-14870 None:intergenic
AGATTGGGATGATGCGTGAA+GGG 0.609226 tig0016544:-14804 None:intergenic
GAAGCGCGTGGAGGAGATGG+TGG 0.610651 tig0016544:-14887 None:intergenic
ATAAGCTAAATTAAGAAGAG+AGG 0.621304 tig0016544:+14645 Msa1358870:five_prime_UTR
GGAGGGAGAGAAGAAGAAGG+GGG 0.622958 tig0016544:-15007 None:intergenic
ATCCCAAACAGGTTCAGTCA+AGG 0.623683 tig0016544:-15098 None:intergenic
CAGATTGGGATGATGCGTGA+AGG 0.631170 tig0016544:-14805 None:intergenic
GGTCGGGTAGAAGAAGGAGG+AGG 0.632753 tig0016544:-15037 None:intergenic
GTGACGGGGATTGAAGCGCG+TGG 0.640207 tig0016544:-14899 None:intergenic
TTGACTGCAGAACTCATGAA+AGG 0.643060 tig0016544:-18396 None:intergenic
TGGTATGTGTGACATTGGCG+TGG 0.645314 tig0016544:+18355 Msa1358870:CDS
AAGAAGTGGAAGAAGTGACG+GGG 0.646121 tig0016544:-14913 None:intergenic
GGTAGTGGTATGTGTGACAT+TGG 0.650583 tig0016544:+18350 Msa1358870:CDS
TCAGGTCGGGTAGAAGAAGG+AGG 0.656155 tig0016544:-15040 None:intergenic
GGGAGCAGGTCCGAATCCGG+AGG 0.661116 tig0016544:-15071 None:intergenic
GATTGGGATGATGCGTGAAG+GGG 0.661855 tig0016544:-14803 None:intergenic
GGGGCGCGAGTACAAAAGAA+GGG 0.663933 tig0016544:-18601 None:intergenic
ACGGGGATTGAAGCGCGTGG+AGG 0.669835 tig0016544:-14896 None:intergenic
CGGAGGTAGAGATATCAGGT+CGG 0.680944 tig0016544:-15054 None:intergenic
TTAATGCACCAACATCAAGA+GGG 0.688001 tig0016544:-18293 None:intergenic
TGGACGAGCAGGAAGAACGG+TGG 0.746906 tig0016544:-14867 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAAATCAAATCAAAT+TGG - tig0016544:14610-14629 None:intergenic 10.0%
!! AATTATGTAGTTTATATTAT+TGG - tig0016544:16855-16874 None:intergenic 10.0%
!! AATAATATAAACTACATAAT+TGG + tig0016544:16854-16873 Msa1358870:intron 10.0%
!! ATAATATAAACTACATAATT+GGG + tig0016544:16855-16874 Msa1358870:intron 10.0%
!! TTGAAATTGAAAGAAAAAAA+AGG + tig0016544:14711-14730 Msa1358870:five_prime_UTR 15.0%
!! CTAGATACATTTATTATATA+TGG + tig0016544:15662-15681 Msa1358870:intron 15.0%
!!! ATTTTGATAGAAATATAACT+TGG + tig0016544:16217-16236 Msa1358870:intron 15.0%
!!! TATGAATTTTCATTTTTGTT+GGG + tig0016544:17625-17644 Msa1358870:intron 15.0%
!! ATATATAGTATAAAAGACAA+AGG - tig0016544:17673-17692 None:intergenic 15.0%
!! AATGATTGTATAATATTACA+TGG + tig0016544:18670-18689 Msa1358870:three_prime_UTR 15.0%
!! AATTCAATTTATTATGAGTC+CGG - tig0016544:15860-15879 None:intergenic 20.0%
!!! ATAAAGTTTTTACTTCTCTA+GGG - tig0016544:16015-16034 None:intergenic 20.0%
!!! AATAAAGTTTTTACTTCTCT+AGG - tig0016544:16016-16035 None:intergenic 20.0%
!! CAGACAATTAAAAAAAAACA+GGG - tig0016544:16067-16086 None:intergenic 20.0%
!! ACAGACAATTAAAAAAAAAC+AGG - tig0016544:16068-16087 None:intergenic 20.0%
!! TGTCTGTATATATGTTTATA+AGG + tig0016544:16081-16100 Msa1358870:intron 20.0%
!! TGTATATATGTTTATAAGGA+TGG + tig0016544:16085-16104 Msa1358870:intron 20.0%
!! AATAAATTGTTAGATGTTAG+CGG - tig0016544:16164-16183 None:intergenic 20.0%
!!! AGTTCAAAAAACAGTTTTAT+AGG - tig0016544:16263-16282 None:intergenic 20.0%
!! AAAACAAATTATGCATTTCT+AGG - tig0016544:16405-16424 None:intergenic 20.0%
!!! ATTATTTGATGGCAAAATAT+TGG - tig0016544:16975-16994 None:intergenic 20.0%
!! CTAATACTCAAATTATTTGA+TGG - tig0016544:16986-17005 None:intergenic 20.0%
!! CATCAAATAATTTGAGTATT+AGG + tig0016544:16984-17003 Msa1358870:intron 20.0%
!! AATTCAAAGAAAAACATGTT+GGG - tig0016544:17050-17069 None:intergenic 20.0%
!! AAATTCAAAGAAAAACATGT+TGG - tig0016544:17051-17070 None:intergenic 20.0%
!!! TTTTGAAGTTTTCATTTGAT+GGG + tig0016544:17096-17115 Msa1358870:intron 20.0%
!! TACTAACCATTTATAGAAAA+TGG + tig0016544:17600-17619 Msa1358870:intron 20.0%
!!! CTATGAATTTTCATTTTTGT+TGG + tig0016544:17624-17643 Msa1358870:intron 20.0%
!!! ATGAATTTTCATTTTTGTTG+GGG + tig0016544:17626-17645 Msa1358870:intron 20.0%
!! AAAGTTAAAAGCTCATAAAA+TGG - tig0016544:17917-17936 None:intergenic 20.0%
!!! ATCTGTTTTGATGTATAAAA+AGG + tig0016544:18125-18144 Msa1358870:intron 20.0%
!! GAAGATTTAATTGTATCATA+AGG + tig0016544:18147-18166 Msa1358870:intron 20.0%
!! ACAAAAATTCCTATTTAGAA+GGG - tig0016544:18551-18570 None:intergenic 20.0%
!! AACAAAAATTCCTATTTAGA+AGG - tig0016544:18552-18571 None:intergenic 20.0%
!! TATCAAACAGAAAAAGAAAA+GGG - tig0016544:18625-18644 None:intergenic 20.0%
!! ATATCAAACAGAAAAAGAAA+AGG - tig0016544:18626-18645 None:intergenic 20.0%
! ATAAGCTAAATTAAGAAGAG+AGG + tig0016544:14645-14664 Msa1358870:five_prime_UTR 25.0%
! TTTCAAATTACTAACAATCC+TGG - tig0016544:15143-15162 None:intergenic 25.0%
! AAGAAAACAATGAAGAAGAA+AGG - tig0016544:15235-15254 None:intergenic 25.0%
!! TTCTTCTTCATTGTTTTCTT+AGG + tig0016544:15235-15254 Msa1358870:CDS 25.0%
! AATCTGATATTATGTTGATG+TGG + tig0016544:15364-15383 Msa1358870:intron 25.0%
! AGGAAATTGGATATAGTAAA+TGG + tig0016544:15513-15532 Msa1358870:intron 25.0%
! GATTCAAGTATAATTCTAAC+AGG - tig0016544:15643-15662 None:intergenic 25.0%
! TTGTTAATTATGCTCTTATC+CGG + tig0016544:15838-15857 Msa1358870:intron 25.0%
!!! AACCTAAATGTTTTTTGGAA+AGG - tig0016544:16195-16214 None:intergenic 25.0%
!!! AATGCAACCTAAATGTTTTT+TGG - tig0016544:16200-16219 None:intergenic 25.0%
! ATATGTTCATGTTACGATTT+AGG - tig0016544:16536-16555 None:intergenic 25.0%
!! ACCATATAATGGAAAGAAAT+AGG + tig0016544:16716-16735 Msa1358870:intron 25.0%
!! CCATATAATGGAAAGAAATA+GGG + tig0016544:16717-16736 Msa1358870:intron 25.0%
!! CATATAATGGAAAGAAATAG+GGG + tig0016544:16718-16737 Msa1358870:intron 25.0%
!! TAATTATTGTGAAGCACTTT+CGG - tig0016544:16820-16839 None:intergenic 25.0%
! TATTGTCATTACTAGTATTC+CGG - tig0016544:16948-16967 None:intergenic 25.0%
!!! TGTTGGGTTATTTTAAAACT+TGG - tig0016544:17034-17053 None:intergenic 25.0%
!!! GTTTTGAAGTTTTCATTTGA+TGG + tig0016544:17095-17114 Msa1358870:intron 25.0%
!!! TTTTTAGTAAACAAGAACTG+TGG + tig0016544:17120-17139 Msa1358870:intron 25.0%
! ATATGCTTTATAGAACTGAA+TGG - tig0016544:17196-17215 None:intergenic 25.0%
! CTATAAAGCATATAACTCAT+TGG + tig0016544:17203-17222 Msa1358870:intron 25.0%
! GAAATAATCATCCTAATAGT+TGG - tig0016544:17308-17327 None:intergenic 25.0%
! ACTATTAGGATGATTATTTC+AGG + tig0016544:17308-17327 Msa1358870:intron 25.0%
!! CATAGTCCATTTTCTATAAA+TGG - tig0016544:17609-17628 None:intergenic 25.0%
!!! TGAATTTTCATTTTTGTTGG+GGG + tig0016544:17627-17646 Msa1358870:intron 25.0%
! GAACAATGTTATAGTAAAAG+TGG + tig0016544:18329-18348 Msa1358870:CDS 25.0%
! ATACATACATGAGAAAAACA+GGG - tig0016544:18449-18468 None:intergenic 25.0%
! ACTTTATTCAGATAACTACT+TGG + tig0016544:18521-18540 Msa1358870:three_prime_UTR 25.0%
! ATCAAACAGAAAAAGAAAAG+GGG - tig0016544:18624-18643 None:intergenic 25.0%
TAAGAAGAGAGGAAAGAAAA+AGG + tig0016544:14656-14675 Msa1358870:five_prime_UTR 30.0%
AAGAAGAGAGGAAAGAAAAA+GGG + tig0016544:14657-14676 Msa1358870:five_prime_UTR 30.0%
TGATATTATGTTGATGTGGA+AGG + tig0016544:15368-15387 Msa1358870:intron 30.0%
CATTCTAATCTGAACTGAAT+AGG - tig0016544:15437-15456 None:intergenic 30.0%
TACGAAATTTCCATGTAACT+AGG + tig0016544:15493-15512 Msa1358870:intron 30.0%
TTTCCATGTAACTAGGAAAT+TGG + tig0016544:15500-15519 Msa1358870:intron 30.0%
TATCCAATTTCCTAGTTACA+TGG - tig0016544:15506-15525 None:intergenic 30.0%
GTCAACTTCTACAAGAAAAA+TGG - tig0016544:15570-15589 None:intergenic 30.0%
TTAATGCGCATGATATTAGT+AGG + tig0016544:15597-15616 Msa1358870:intron 30.0%
TTTATATGTTCCAATCCCTT+TGG - tig0016544:15986-16005 None:intergenic 30.0%
ATATGTTTATAAGGATGGCT+TGG + tig0016544:16090-16109 Msa1358870:intron 30.0%
TGCCTTTCCAAAAAACATTT+AGG + tig0016544:16190-16209 Msa1358870:intron 30.0%
GCATGCATTACTAATCTATA+GGG - tig0016544:16335-16354 None:intergenic 30.0%
! TATGCATTTCTAGGTAATGA+GGG - tig0016544:16396-16415 None:intergenic 30.0%
! TTATGCATTTCTAGGTAATG+AGG - tig0016544:16397-16416 None:intergenic 30.0%
!!! TGCATAATTTGTTTTCTGCA+TGG + tig0016544:16410-16429 Msa1358870:intron 30.0%
!!! GCATAATTTGTTTTCTGCAT+GGG + tig0016544:16411-16430 Msa1358870:intron 30.0%
! AACGATAAAGTTTTCTGCAT+TGG + tig0016544:16438-16457 Msa1358870:intron 30.0%
! TCATGTTACGATTTAGGATT+AGG - tig0016544:16530-16549 None:intergenic 30.0%
TTCTGAACGTATTTGTAGTT+AGG - tig0016544:16565-16584 None:intergenic 30.0%
ATGAAATATGTGTGCCTAAA+TGG + tig0016544:16684-16703 Msa1358870:intron 30.0%
TGAAATATGTGTGCCTAAAT+GGG + tig0016544:16685-16704 Msa1358870:intron 30.0%
! CCCTATTTCTTTCCATTATA+TGG - tig0016544:16720-16739 None:intergenic 30.0%
TAGGTACAATTAATCTGACT+AGG + tig0016544:17003-17022 Msa1358870:intron 30.0%
! TGAATTTTTCCTTAGATAGC+TGG + tig0016544:17064-17083 Msa1358870:intron 30.0%
TAATCATCCTAATAGTTGGA+TGG - tig0016544:17304-17323 None:intergenic 30.0%
! ACTATGACATCAGCTTATTT+TGG - tig0016544:17353-17372 None:intergenic 30.0%
GGTAAAATTATACACGCTAT+TGG - tig0016544:17555-17574 None:intergenic 30.0%
!! GAATTTTCATTTTTGTTGGG+GGG + tig0016544:17628-17647 Msa1358870:intron 30.0%
! CTTTTGCTTATATTAGTGAC+CGG - tig0016544:18095-18114 None:intergenic 30.0%
! CTTTTGCTTATATTAGTGAC+CGG + tig0016544:18095-18114 Msa1358870:intron 30.0%
TGTTATAGTAAAAGTGGTAG+TGG + tig0016544:18335-18354 Msa1358870:CDS 30.0%
GATACATACATGAGAAAAAC+AGG - tig0016544:18450-18469 None:intergenic 30.0%
TTTCTCATGTATGTATCTGT+TGG + tig0016544:18453-18472 Msa1358870:CDS 30.0%
ACATTGATGCATTTAGTCAA+TGG - tig0016544:18493-18512 None:intergenic 30.0%
TCAAACAGAAAAAGAAAAGG+GGG - tig0016544:18623-18642 None:intergenic 30.0%
AAATCTCATTTACGCTTCTC+CGG + tig0016544:14844-14863 Msa1358870:CDS 35.0%
ATTGATGAAAGGAGAAGAAG+TGG - tig0016544:14930-14949 None:intergenic 35.0%
GGAAGATTGGAATTGATGAA+AGG - tig0016544:14941-14960 None:intergenic 35.0%
TATAGTAAATGGTTCCTGTG+CGG + tig0016544:15524-15543 Msa1358870:intron 35.0%
GCCAATGATCTTATGCATTT+CGG + tig0016544:15715-15734 Msa1358870:intron 35.0%
CCAATGATCTTATGCATTTC+GGG + tig0016544:15716-15735 Msa1358870:intron 35.0%
! TTTCGGGTACATTGATTGTT+TGG + tig0016544:15732-15751 Msa1358870:intron 35.0%
CTCAGATTCTCTTCAATTTG+TGG + tig0016544:15885-15904 Msa1358870:intron 35.0%
CGAATTTATACCAAAGGGAT+TGG + tig0016544:15973-15992 Msa1358870:intron 35.0%
AGGAAGTCAGAGAAAGAATA+CGG - tig0016544:16243-16262 None:intergenic 35.0%
CGCATGCATTACTAATCTAT+AGG - tig0016544:16336-16355 None:intergenic 35.0%
TCATTCAAATCTGCACATTC+AGG - tig0016544:16591-16610 None:intergenic 35.0%
AAAAGGTTGCAAACAGATCA+GGG - tig0016544:16616-16635 None:intergenic 35.0%
CACACATATTTCATCACTAG+TGG - tig0016544:16678-16697 None:intergenic 35.0%
! TCTTTTTCTTCTCCATGAGT+CGG + tig0016544:17404-17423 Msa1358870:intron 35.0%
AACTGAAAGCTAACTTTGCA+TGG - tig0016544:17472-17491 None:intergenic 35.0%
!! TGCAAAGTTAGCTTTCAGTT+TGG + tig0016544:17472-17491 Msa1358870:intron 35.0%
! CTTTCAGTTTGGAATCTGTA+GGG + tig0016544:17483-17502 Msa1358870:intron 35.0%
ACTGACCAAATTCATTTGAC+AGG - tig0016544:17748-17767 None:intergenic 35.0%
! CTTTTTATTGTCTCAGTCTG+AGG + tig0016544:17794-17813 Msa1358870:intron 35.0%
AGTGTCATATTTACTTGTCG+AGG + tig0016544:17942-17961 Msa1358870:intron 35.0%
AGCCTAATTGAGAGTCAAAA+AGG + tig0016544:18171-18190 Msa1358870:intron 35.0%
GCCTAATTGAGAGTCAAAAA+GGG + tig0016544:18172-18191 Msa1358870:intron 35.0%
! TTCGTCTCTTCAACTTTTCA+GGG + tig0016544:18219-18238 Msa1358870:intron 35.0%
TTAATGCACCAACATCAAGA+GGG - tig0016544:18296-18315 None:intergenic 35.0%
ATTAATGCACCAACATCAAG+AGG - tig0016544:18297-18316 None:intergenic 35.0%
CTTGGAATTCCCTTCTAAAT+AGG + tig0016544:18539-18558 Msa1358870:three_prime_UTR 35.0%
AGGGTAACAAAGAATACGAT+AGG - tig0016544:18585-18604 None:intergenic 35.0%
AGAAGAAGTGGAAGAAGTGA+CGG - tig0016544:14918-14937 None:intergenic 40.0%
! ACAGGTTCAGTCAAGGTATT+GGG - tig0016544:15094-15113 None:intergenic 40.0%
AACAGGTTCAGTCAAGGTAT+TGG - tig0016544:15095-15114 None:intergenic 40.0%
ATACCTTGACTGAACCTGTT+TGG + tig0016544:15095-15114 Msa1358870:CDS 40.0%
TACCTTGACTGAACCTGTTT+GGG + tig0016544:15096-15115 Msa1358870:CDS 40.0%
! CTTTTGACAGTATCCCAAAC+AGG - tig0016544:15112-15131 None:intergenic 40.0%
TACCAGGATCTTCACGATTA+GGG - tig0016544:15183-15202 None:intergenic 40.0%
TTACCAGGATCTTCACGATT+AGG - tig0016544:15184-15203 None:intergenic 40.0%
TAATCGTGAAGATCCTGGTA+AGG + tig0016544:15183-15202 Msa1358870:CDS 40.0%
TTTGCGTGATTGGGATCTTT+GGG + tig0016544:15207-15226 Msa1358870:CDS 40.0%
TCTTAGGTCTCACTCTTTCT+TGG + tig0016544:15251-15270 Msa1358870:CDS 40.0%
TTGGTCTGCTTCTGTCAAAA+AGG + tig0016544:15270-15289 Msa1358870:CDS 40.0%
CCCGAAATGCATAAGATCAT+TGG - tig0016544:15719-15738 None:intergenic 40.0%
TCTGCGCGAATTTATACCAA+AGG + tig0016544:15967-15986 Msa1358870:intron 40.0%
CTGCGCGAATTTATACCAAA+GGG + tig0016544:15968-15987 Msa1358870:intron 40.0%
! TGTTTATAAGGATGGCTTGG+TGG + tig0016544:16093-16112 Msa1358870:intron 40.0%
! TTGGGAGTTTGGAGTCATAA+GGG + tig0016544:16116-16135 Msa1358870:intron 40.0%
GAAAAGGTTGCAAACAGATC+AGG - tig0016544:16617-16636 None:intergenic 40.0%
TCACTCACACACAACAGAAA+AGG - tig0016544:16633-16652 None:intergenic 40.0%
! TTTTCTGTTGTGTGTGAGTG+AGG + tig0016544:16632-16651 Msa1358870:intron 40.0%
ATGGTATAGCTGTCCCATTT+AGG - tig0016544:16701-16720 None:intergenic 40.0%
GGGACAGCTATACCATATAA+TGG + tig0016544:16705-16724 Msa1358870:intron 40.0%
!! CTTATGTGGACTAGCTATGA+TGG - tig0016544:16776-16795 None:intergenic 40.0%
! TGTGAAGCACTTTCGGTAAT+GGG - tig0016544:16813-16832 None:intergenic 40.0%
! TTGTGAAGCACTTTCGGTAA+TGG - tig0016544:16814-16833 None:intergenic 40.0%
CTAAGTACTCCAGCTATCTA+AGG - tig0016544:17076-17095 None:intergenic 40.0%
! GCAGCAATTCTGAAAACTGT+TGG - tig0016544:17149-17168 None:intergenic 40.0%
TGATAGATGCAAGTAAGAGC+TGG + tig0016544:17229-17248 Msa1358870:intron 40.0%
CCTAATAGTTGGATGGTCTT+GGG - tig0016544:17297-17316 None:intergenic 40.0%
TCCTAATAGTTGGATGGTCT+TGG - tig0016544:17298-17317 None:intergenic 40.0%
TTTCCCTTTATCCTTTCTGC+TGG + tig0016544:17444-17463 Msa1358870:intron 40.0%
TTCCCTTTATCCTTTCTGCT+GGG + tig0016544:17445-17464 Msa1358870:intron 40.0%
! GCTTTCAGTTTGGAATCTGT+AGG + tig0016544:17482-17501 Msa1358870:intron 40.0%
AGCAATACAGGAGTGAAACT+TGG - tig0016544:17576-17595 None:intergenic 40.0%
GGTTAGTACAAGAGCAATAC+AGG - tig0016544:17588-17607 None:intergenic 40.0%
CACGACCTGTCAAATGAATT+TGG + tig0016544:17740-17759 Msa1358870:intron 40.0%
GTGAGATGAAAGAGAGAAAG+AGG - tig0016544:17895-17914 None:intergenic 40.0%
GTGTTGTAAAATACTCCCTC+CGG + tig0016544:17964-17983 Msa1358870:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG - tig0016544:18099-18118 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG - tig0016544:18098-18117 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG + tig0016544:18098-18117 Msa1358870:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG + tig0016544:18099-18118 Msa1358870:intron 40.0%
ATCAAAACAGATACTCCCTC+CGG - tig0016544:18117-18136 None:intergenic 40.0%
!! GCCCTTTTTGACTCTCAATT+AGG - tig0016544:18176-18195 None:intergenic 40.0%
AATTGAGAGTCAAAAAGGGC+AGG + tig0016544:18176-18195 Msa1358870:intron 40.0%
! CTTCGTCTCTTCAACTTTTC+AGG + tig0016544:18218-18237 Msa1358870:intron 40.0%
TGCTTATTCCCTCTTGATGT+TGG + tig0016544:18285-18304 Msa1358870:CDS 40.0%
TTGACTGCAGAACTCATGAA+AGG - tig0016544:18399-18418 None:intergenic 40.0%
! AGAGCAAGAGCTTTTCTTCT+GGG - tig0016544:18423-18442 None:intergenic 40.0%
AGATTGGGATGATGCGTGAA+GGG - tig0016544:14807-14826 None:intergenic 45.0%
GATCTCGTCGATGTCAGATT+GGG - tig0016544:14822-14841 None:intergenic 45.0%
AAGAAGTGGAAGAAGTGACG+GGG - tig0016544:14916-14935 None:intergenic 45.0%
GAAGAAGTGGAAGAAGTGAC+GGG - tig0016544:14917-14936 None:intergenic 45.0%
! GAGAAGAAGAAGGGGGTTTT+GGG - tig0016544:15003-15022 None:intergenic 45.0%
! AGAGAAGAAGAAGGGGGTTT+TGG - tig0016544:15004-15023 None:intergenic 45.0%
ATATCAGGTCGGGTAGAAGA+AGG - tig0016544:15046-15065 None:intergenic 45.0%
AATCCGGAGGTAGAGATATC+AGG - tig0016544:15061-15080 None:intergenic 45.0%
GATATCTCTACCTCCGGATT+CGG + tig0016544:15061-15080 Msa1358870:CDS 45.0%
ATCCCAAACAGGTTCAGTCA+AGG - tig0016544:15101-15120 None:intergenic 45.0%
CTGTCAAAAGAGATCTCTCC+AGG + tig0016544:15122-15141 Msa1358870:CDS 45.0%
GGATCTTCACGATTAGGGTT+AGG - tig0016544:15178-15197 None:intergenic 45.0%
AACCCTAATCGTGAAGATCC+TGG + tig0016544:15178-15197 Msa1358870:CDS 45.0%
TGGTAAGGCTTTGCGTGATT+GGG + tig0016544:15198-15217 Msa1358870:CDS 45.0%
CTTTGCGTGATTGGGATCTT+TGG + tig0016544:15206-15225 Msa1358870:CDS 45.0%
TTGCGTGATTGGGATCTTTG+GGG + tig0016544:15208-15227 Msa1358870:CDS 45.0%
ATTGTTTGGTACCCAGCCAA+AGG + tig0016544:15746-15765 Msa1358870:intron 45.0%
!! TATAAGGATGGCTTGGTGGT+TGG + tig0016544:16097-16116 Msa1358870:intron 45.0%
!! ATAAGGATGGCTTGGTGGTT+GGG + tig0016544:16098-16117 Msa1358870:intron 45.0%
! GTTGGGAGTTTGGAGTCATA+AGG + tig0016544:16115-16134 Msa1358870:intron 45.0%
GTTAGATGTTAGCGGAGAGT+GGG - tig0016544:16156-16175 None:intergenic 45.0%
TGTTAGATGTTAGCGGAGAG+TGG - tig0016544:16157-16176 None:intergenic 45.0%
CTCGTCATCTCTTGCAAAGA+TGG + tig0016544:16357-16376 Msa1358870:intron 45.0%
ATGACCAACTGCAACTACTC+AGG + tig0016544:16466-16485 Msa1358870:intron 45.0%
TGACCAACTGCAACTACTCA+GGG + tig0016544:16467-16486 Msa1358870:intron 45.0%
AACTGCAACTACTCAGGGAA+GGG + tig0016544:16472-16491 Msa1358870:intron 45.0%
GCTTCTCTGTGTTAGATGAG+TGG + tig0016544:16740-16759 Msa1358870:intron 45.0%
! TGAATGCGGAAGGTCTTATG+TGG - tig0016544:16790-16809 None:intergenic 45.0%
!! CTTTCGGTAATGGGTGAATG+CGG - tig0016544:16804-16823 None:intergenic 45.0%
GAACTGAATGGCACGTTAGA+GGG - tig0016544:17184-17203 None:intergenic 45.0%
AGAACTGAATGGCACGTTAG+AGG - tig0016544:17185-17204 None:intergenic 45.0%
ATGCAAGTAAGAGCTGGTGA+TGG + tig0016544:17235-17254 Msa1358870:intron 45.0%
CCCAAGACCATCCAACTATT+AGG + tig0016544:17294-17313 Msa1358870:intron 45.0%
TTATTTCAGGCGTTCAGCAC+AGG + tig0016544:17321-17340 Msa1358870:intron 45.0%
TATTTCAGGCGTTCAGCACA+GGG + tig0016544:17322-17341 Msa1358870:intron 45.0%
TCAACAAGCAATCCGACTCA+TGG - tig0016544:17419-17438 None:intergenic 45.0%
GTCCCAGCAGAAAGGATAAA+GGG - tig0016544:17450-17469 None:intergenic 45.0%
TGGAATCTGTAGGGTTGTTG+AGG + tig0016544:17492-17511 Msa1358870:intron 45.0%
GGGGGGTTCAAATTCTAAGT+TGG + tig0016544:17645-17664 Msa1358870:intron 45.0%
!! GTCTCAGTCTGAGGTTTTTG+CGG + tig0016544:17803-17822 Msa1358870:intron 45.0%
GACATTGAATGTCCTGCTTC+TGG + tig0016544:17863-17882 Msa1358870:CDS 45.0%
AAGAGGCTATTACCAGAAGC+AGG - tig0016544:17878-17897 None:intergenic 45.0%
!! GTCTCTTCAACTTTTCAGGG+TGG + tig0016544:18222-18241 Msa1358870:intron 45.0%
! GGTAGTGGTATGTGTGACAT+TGG + tig0016544:18350-18369 Msa1358870:CDS 45.0%
! GAGCAAGAGCTTTTCTTCTG+GGG - tig0016544:18422-18441 None:intergenic 45.0%
! GAGAGCAAGAGCTTTTCTTC+TGG - tig0016544:18424-18443 None:intergenic 45.0%
GATTGGGATGATGCGTGAAG+GGG - tig0016544:14806-14825 None:intergenic 50.0%
CAGATTGGGATGATGCGTGA+AGG - tig0016544:14808-14827 None:intergenic 50.0%
CGATCTCGTCGATGTCAGAT+TGG - tig0016544:14823-14842 None:intergenic 50.0%
GGGTGCAGGATTAGGAAGAT+TGG - tig0016544:14954-14973 None:intergenic 50.0%
AGGGGTGAGAAGAGGATTTG+GGG - tig0016544:14976-14995 None:intergenic 50.0%
GAGGGGTGAGAAGAGGATTT+GGG - tig0016544:14977-14996 None:intergenic 50.0%
AGAGGGGTGAGAAGAGGATT+TGG - tig0016544:14978-14997 None:intergenic 50.0%
AGGAGGGAGAGAAGAAGAAG+GGG - tig0016544:15011-15030 None:intergenic 50.0%
GAGGAGGGAGAGAAGAAGAA+GGG - tig0016544:15012-15031 None:intergenic 50.0%
AGAGGAGGGAGAGAAGAAGA+AGG - tig0016544:15013-15032 None:intergenic 50.0%
GGAGGTAGAGATATCAGGTC+GGG - tig0016544:15056-15075 None:intergenic 50.0%
CGGAGGTAGAGATATCAGGT+CGG - tig0016544:15057-15076 None:intergenic 50.0%
CGACCTGATATCTCTACCTC+CGG + tig0016544:15055-15074 Msa1358870:CDS 50.0%
!! TCAGTCAAGGTATTGGGAGC+AGG - tig0016544:15088-15107 None:intergenic 50.0%
CAATCACGCAAAGCCTTACC+AGG - tig0016544:15199-15218 None:intergenic 50.0%
CTGGTAAGGCTTTGCGTGAT+TGG + tig0016544:15197-15216 Msa1358870:CDS 50.0%
TCCTGTGCGGTATTTCGATG+CGG + tig0016544:15537-15556 Msa1358870:intron 50.0%
CTACATATCCGAGCTGCCTT+TGG - tig0016544:15765-15784 None:intergenic 50.0%
ATTCGCGCAGAGAAAGAGAG+CGG - tig0016544:15958-15977 None:intergenic 50.0%
CTTCCCTGAGTAGTTGCAGT+TGG - tig0016544:16473-16492 None:intergenic 50.0%
CAACTGCAACTACTCAGGGA+AGG + tig0016544:16471-16490 Msa1358870:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - tig0016544:16923-16942 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + tig0016544:16920-16939 Msa1358870:intron 50.0%
CTTATCCCACTAAGTGGAGC+CGG + tig0016544:16926-16945 Msa1358870:intron 50.0%
GTATTCCGGCTCCACTTAGT+GGG - tig0016544:16934-16953 None:intergenic 50.0%
AGTATTCCGGCTCCACTTAG+TGG - tig0016544:16935-16954 None:intergenic 50.0%
AATGGCACGTTAGAGGGAGA+GGG - tig0016544:17178-17197 None:intergenic 50.0%
ATTTCAGGCGTTCAGCACAG+GGG + tig0016544:17323-17342 Msa1358870:intron 50.0%
GGTCCCAGCAGAAAGGATAA+AGG - tig0016544:17451-17470 None:intergenic 50.0%
TTTGCATGGTCCCAGCAGAA+AGG - tig0016544:17458-17477 None:intergenic 50.0%
TAGGGTTGTTGAGGCCTTGA+GGG + tig0016544:17501-17520 Msa1358870:intron 50.0%
GCACTATATCATCCCCCTCA+AGG - tig0016544:17518-17537 None:intergenic 50.0%
GAGGGGGATGATATAGTGCT+TGG + tig0016544:17519-17538 Msa1358870:intron 50.0%
! GCATTTGCCTTACTTGCTGC+TGG + tig0016544:17828-17847 Msa1358870:CDS 50.0%
TACAGCACCAGCAGCAAGTA+AGG - tig0016544:17838-17857 None:intergenic 50.0%
TTCCAGAGTCTGAGTCTGCT+CGG + tig0016544:18258-18277 Msa1358870:CDS 50.0%
TGGTATGTGTGACATTGGCG+TGG + tig0016544:18355-18374 Msa1358870:CDS 50.0%
GGATGATGCGTGAAGGGGTA+TGG - tig0016544:14801-14820 None:intergenic 55.0%
! TGGTGGACGAGCAGGAAGAA+CGG - tig0016544:14873-14892 None:intergenic 55.0%
ATTGAAGCGCGTGGAGGAGA+TGG - tig0016544:14893-14912 None:intergenic 55.0%
! GATTTGGGGGGTGCAGGATT+AGG - tig0016544:14962-14981 None:intergenic 55.0%
GGGTGAGAAGAGGATTTGGG+GGG - tig0016544:14974-14993 None:intergenic 55.0%
GGGGTGAGAAGAGGATTTGG+GGG - tig0016544:14975-14994 None:intergenic 55.0%
!!! AAGGGGGTTTTGGGAGAGAG+GGG - tig0016544:14994-15013 None:intergenic 55.0%
!!! GAAGGGGGTTTTGGGAGAGA+GGG - tig0016544:14995-15014 None:intergenic 55.0%
!!! AGAAGGGGGTTTTGGGAGAG+AGG - tig0016544:14996-15015 None:intergenic 55.0%
GGAGGGAGAGAAGAAGAAGG+GGG - tig0016544:15010-15029 None:intergenic 55.0%
AAGGAGGAGGAGGAAGAGGA+GGG - tig0016544:15027-15046 None:intergenic 55.0%
GAAGAAGGAGGAGGAGGAAG+AGG - tig0016544:15031-15050 None:intergenic 55.0%
TCAGGTCGGGTAGAAGAAGG+AGG - tig0016544:15043-15062 None:intergenic 55.0%
ATTGGGAGCAGGTCCGAATC+CGG - tig0016544:15077-15096 None:intergenic 55.0%
TCCGCATCGAAATACCGCAC+AGG - tig0016544:15541-15560 None:intergenic 55.0%
TATCCGAGCTGCCTTTGGCT+GGG - tig0016544:15760-15779 None:intergenic 55.0%
ATATCCGAGCTGCCTTTGGC+TGG - tig0016544:15761-15780 None:intergenic 55.0%
!! TGGCTTGGTGGTTGGGAGTT+TGG + tig0016544:16105-16124 Msa1358870:intron 55.0%
!! CGGTAATGGGTGAATGCGGA+AGG - tig0016544:16800-16819 None:intergenic 55.0%
CGGCTCCACTTAGTGGGATA+AGG - tig0016544:16928-16947 None:intergenic 55.0%
GAATGGCACGTTAGAGGGAG+AGG - tig0016544:17179-17198 None:intergenic 55.0%
GTAGGGTTGTTGAGGCCTTG+AGG + tig0016544:17500-17519 Msa1358870:intron 55.0%
AGGGTTGTTGAGGCCTTGAG+GGG + tig0016544:17502-17521 Msa1358870:intron 55.0%
AACCGAGCAGACTCAGACTC+TGG - tig0016544:18263-18282 None:intergenic 55.0%
TGACATTGGCGTGGAGCTCT+TGG + tig0016544:18364-18383 Msa1358870:CDS 55.0%
GACATTGGCGTGGAGCTCTT+GGG + tig0016544:18365-18384 Msa1358870:CDS 55.0%
GGGGCGCGAGTACAAAAGAA+GGG - tig0016544:18604-18623 None:intergenic 55.0%
TGGACGAGCAGGAAGAACGG+TGG - tig0016544:14870-14889 None:intergenic 60.0%
! GAAGAGGATTTGGGGGGTGC+AGG - tig0016544:14968-14987 None:intergenic 60.0%
TGGGAGAGAGGGGTGAGAAG+AGG - tig0016544:14984-15003 None:intergenic 60.0%
GAAGGAGGAGGAGGAAGAGG+AGG - tig0016544:15028-15047 None:intergenic 60.0%
CGGGTAGAAGAAGGAGGAGG+AGG - tig0016544:15037-15056 None:intergenic 60.0%
GGTCGGGTAGAAGAAGGAGG+AGG - tig0016544:15040-15059 None:intergenic 60.0%
GTACCCAGCCAAAGGCAGCT+CGG + tig0016544:15754-15773 Msa1358870:intron 60.0%
CGTTAGAGGGAGAGGGAAGC+AGG - tig0016544:17171-17190 None:intergenic 60.0%
GGGTTGTTGAGGCCTTGAGG+GGG + tig0016544:17503-17522 Msa1358870:intron 60.0%
! GGGGGCGCGAGTACAAAAGA+AGG - tig0016544:18605-18624 None:intergenic 60.0%
CGAGCAGGAAGAACGGTGGC+CGG - tig0016544:14866-14885 None:intergenic 65.0%
!! GGAGGAGATGGTGGACGAGC+AGG - tig0016544:14881-14900 None:intergenic 65.0%
GAAGCGCGTGGAGGAGATGG+TGG - tig0016544:14890-14909 None:intergenic 65.0%
ACGGGGATTGAAGCGCGTGG+AGG - tig0016544:14899-14918 None:intergenic 65.0%
! GTGACGGGGATTGAAGCGCG+TGG - tig0016544:14902-14921 None:intergenic 65.0%
GGGAGCAGGTCCGAATCCGG+AGG - tig0016544:15074-15093 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0016544 gene 14590 18721 14590 ID=Msa1358870;Name=Msa1358870
tig0016544 mRNA 14590 18721 14590 ID=Msa1358870-mRNA-1;Parent=Msa1358870;Name=Msa1358870-mRNA-1;_AED=0.00;_eAED=0.00;_QI=192|1|1|1|1|1|3|221|281
tig0016544 exon 14590 15291 14590 ID=Msa1358870-mRNA-1:exon:11081;Parent=Msa1358870-mRNA-1
tig0016544 exon 17810 17884 17810 ID=Msa1358870-mRNA-1:exon:11082;Parent=Msa1358870-mRNA-1
tig0016544 exon 18240 18721 18240 ID=Msa1358870-mRNA-1:exon:11083;Parent=Msa1358870-mRNA-1
tig0016544 five_prime_UTR 14590 14781 14590 ID=Msa1358870-mRNA-1:five_prime_utr;Parent=Msa1358870-mRNA-1
tig0016544 CDS 14782 15291 14782 ID=Msa1358870-mRNA-1:cds;Parent=Msa1358870-mRNA-1
tig0016544 CDS 17810 17884 17810 ID=Msa1358870-mRNA-1:cds;Parent=Msa1358870-mRNA-1
tig0016544 CDS 18240 18500 18240 ID=Msa1358870-mRNA-1:cds;Parent=Msa1358870-mRNA-1
tig0016544 three_prime_UTR 18501 18721 18501 ID=Msa1358870-mRNA-1:three_prime_utr;Parent=Msa1358870-mRNA-1
Gene Sequence

>Msa1358870

ATGTCACACAGCGACACCATACCCCTTCACGCATCATCCCAATCTGACATCGACGAGATCGAAAATCTCATTTACGCTTCTCCGGCCACCGTTCTTCCTGCTCGTCCACCATCTCCTCCACGCGCTTCAATCCCCGTCACTTCTTCCACTTCTTCTCCTTTCATCAATTCCAATCTTCCTAATCCTGCACCCCCCAAATCCTCTTCTCACCCCTCTCTCCCAAAACCCCCTTCTTCTTCTCTCCCTCCTCTTCCTCCTCCTCCTTCTTCTACCCGACCTGATATCTCTACCTCCGGATTCGGACCTGCTCCCAATACCTTGACTGAACCTGTTTGGGATACTGTCAAAAGAGATCTCTCCAGGATTGTTAGTAATTTGAAACTCGTTGTTTTTCCTAACCCTAATCGTGAAGATCCTGGTAAGGCTTTGCGTGATTGGGATCTTTGGGGACCTTTCTTCTTCATTGTTTTCTTAGGTCTCACTCTTTCTTGGTCTGCTTCTGTCAAAAAGTCTGAGGTTTTTGCGGTTGCATTTGCCTTACTTGCTGCTGGTGCTGTAATTTTGACATTGAATGTCCTGCTTCTGGGTGGACACATTATTTTCTTCCAGAGTCTGAGTCTGCTCGGTTATTGCTTATTCCCTCTTGATGTTGGTGCATTAATTTGTATGTTGAAGAACAATGTTATAGTAAAAGTGGTAGTGGTATGTGTGACATTGGCGTGGAGCTCTTGGGCTGCGTATCCTTTCATGAGTTCTGCAGTCAACCCCAGAAGAAAAGCTCTTGCTCTCTACCCTGTTTTTCTCATGTATGTATCTGTTGGTTTTCTCATCATTGCCATTGACTAA

Protein sequence

>Msa1358870

MSHSDTIPLHASSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTSSTSSPFINSNLPNPAPPKSSSHPSLPKPPSSSLPPLPPPPSSTRPDISTSGFGPAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPNREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKNNVIVKVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID*