AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0094100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0094100 MtrunA17_Chr2g0330811 94.895 764 22 4 1 763 1 748 0.0 1479
Msa0094100 MtrunA17_Chr6g0484411 39.780 636 324 7 130 749 168 760 1.26e-133 416
Msa0094100 MtrunA17_Chr1g0187011 39.650 628 340 10 139 757 180 777 2.73e-126 397
Msa0094100 MtrunA17_Chr4g0071101 39.661 590 319 7 171 756 180 736 1.44e-119 377
Msa0094100 MtrunA17_Chr8g0391141 39.192 569 265 9 166 727 106 600 2.62e-117 367
Msa0094100 MtrunA17_Chr6g0451621 38.354 644 322 12 121 749 113 696 5.28e-117 377
Msa0094100 MtrunA17_Chr8g0366041 34.978 223 133 2 187 409 11 221 8.24e-33 126
Msa0094100 MtrunA17_Chr4g0067911 33.544 158 102 1 603 760 193 347 2.93e-17 84.0
Msa0094100 MtrunA17_Chr4g0033621 36.986 146 85 2 599 742 162 302 8.12e-16 80.5
Msa0094100 MtrunA17_Chr1g0171521 39.806 103 59 1 606 708 154 253 1.27e-15 77.8
Msa0094100 MtrunA17_Chr8g0391361 32.468 154 93 3 565 718 9 151 4.04e-15 73.9
Msa0094100 MtrunA17_Chr6g0449261 37.500 128 72 2 606 728 148 272 4.97e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0094100 AT5G16180.1 50.390 770 270 13 2 754 43 717 0.0 678
Msa0094100 AT5G16180.2 44.631 596 219 12 2 581 43 543 3.13e-142 429
Msa0094100 AT3G18390.1 39.715 632 319 11 140 751 205 794 1.63e-137 427
Msa0094100 AT3G01370.1 39.075 627 289 12 154 749 154 718 3.59e-120 385
Msa0094100 AT4G14510.1 37.910 641 300 14 139 727 188 782 3.92e-118 378
Msa0094100 AT3G23070.1 37.165 635 323 9 122 727 168 755 4.33e-115 369
Msa0094100 AT4G29750.2 39.864 587 290 10 171 746 249 783 5.42e-112 359
Msa0094100 AT4G29750.1 39.864 587 290 10 171 746 249 783 6.54e-112 359
Msa0094100 AT3G25440.4 33.784 148 93 2 606 751 18 162 1.57e-16 81.3
Msa0094100 AT3G25440.3 33.784 148 93 2 606 751 18 162 1.57e-16 81.3
Msa0094100 AT3G25440.5 33.784 148 93 2 606 751 18 162 1.57e-16 81.3
Msa0094100 AT3G25440.2 33.784 148 93 2 606 751 109 253 7.82e-16 80.5
Msa0094100 AT3G25440.1 33.784 148 93 2 606 751 173 317 1.44e-15 80.5
Msa0094100 AT2G28480.1 31.667 180 108 4 565 742 127 293 5.91e-15 77.8
Msa0094100 AT4G13070.1 38.710 124 72 2 599 721 171 291 1.06e-14 76.6
Msa0094100 AT3G27550.2 32.414 145 95 1 606 750 144 285 4.55e-11 66.6
Msa0094100 AT3G27550.3 35.156 128 80 1 606 733 88 212 5.36e-11 66.2
Msa0094100 AT3G27550.1 35.156 128 80 1 606 733 88 212 5.36e-11 66.2

Find 182 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAGCAAGCAACATATTT+TGG 0.181157 1_2:-77184414 Msa0094100:three_prime_UTR
TCATTTCGTCAAGCTTATTT+TGG 0.203418 1_2:+77186646 None:intergenic
GTGGAACTTTAACAGAATTT+AGG 0.210037 1_2:-77186674 Msa0094100:CDS
AATTGGGTTTGTTGTGATTA+AGG 0.229565 1_2:+77189755 None:intergenic
ACCAAATCTGCAACTCTTCT+TGG 0.232455 1_2:+77186816 None:intergenic
TATCCCTTTATGTCAAAATA+TGG 0.250921 1_2:-77189188 Msa0094100:CDS
ACCTTTAGAGGTCAACTTAT+AGG 0.277223 1_2:+77188202 None:intergenic
AGGCTGCAATAATGAGGATT+TGG 0.297552 1_2:-77189303 Msa0094100:CDS
TGAAAACTTTGGGTCTAGTT+TGG 0.299875 1_2:-77189479 Msa0094100:CDS
CCACCAAAGGTGATCTTTAC+CGG 0.300203 1_2:-77188106 Msa0094100:CDS
CCCAACACCTCCATGGATTA+AGG 0.301456 1_2:-77189680 Msa0094100:CDS
TCAAATCCAGGAACCACTTC+TGG 0.302692 1_2:+77187876 None:intergenic
GTTAGGAATTGAAAGGGAAT+TGG 0.311332 1_2:+77189738 None:intergenic
TTACTTCCAGAAGTGGTTCC+TGG 0.315334 1_2:-77187882 Msa0094100:CDS
ATGAGAAGTTGTCTAGTTCT+TGG 0.317321 1_2:-77186312 Msa0094100:intron
TGTGAAGGCTTTCAAGTTTG+TGG 0.322530 1_2:+77189533 None:intergenic
TTTGCCTCTGAGTTCTTTAC+CGG 0.328116 1_2:+77189576 None:intergenic
TCAGAATGGTCACGTTGTTT+AGG 0.337112 1_2:+77189610 None:intergenic
AATCTTCGTAGAACCTTTAG+AGG 0.341041 1_2:+77188190 None:intergenic
TAGGACCTCGCTTCATTGAT+TGG 0.342223 1_2:-77187938 Msa0094100:CDS
CAGCTTCCTTTCTGTTCTGA+AGG 0.347240 1_2:+77184557 None:intergenic
ATGTTGTGAATCAAATTAAA+AGG 0.352074 1_2:-77189249 Msa0094100:CDS
GTCTAGTTTGGAAAATTTGA+TGG 0.361228 1_2:-77189467 Msa0094100:CDS
TCCAAGAAGAGTTGCAGATT+TGG 0.361761 1_2:-77186817 Msa0094100:CDS
GATAGATTATTGGATGGTTT+AGG 0.362889 1_2:-77187957 Msa0094100:CDS
CTCTGATTTGAAGCTGAAAC+TGG 0.367254 1_2:-77184997 Msa0094100:intron
TCATCTTCAATCCCATCTTT+CGG 0.370150 1_2:+77186331 None:intergenic
ACATTATCATCATCGTTGTT+AGG 0.376633 1_2:+77189721 None:intergenic
GTGAAGGCTTTCAAGTTTGT+GGG 0.376798 1_2:+77189534 None:intergenic
GAGGGAATGTGATAGATTAT+TGG 0.377377 1_2:-77187967 Msa0094100:CDS
GCCTTAATCCATGGAGGTGT+TGG 0.377803 1_2:+77189679 None:intergenic
TTAGGAATTGAAAGGGAATT+GGG 0.383453 1_2:+77189739 None:intergenic
TCACAAGACTCAAACTCAAA+TGG 0.385883 1_2:-77189515 Msa0094100:CDS
CATTCTGATAAAGCTTTAAC+CGG 0.393571 1_2:-77189595 Msa0094100:CDS
GAGACTTGCCTTCAGTTCAT+TGG 0.394056 1_2:+77187257 None:intergenic
ATACTCTTTGTCTCATGATA+AGG 0.394727 1_2:-77183856 Msa0094100:three_prime_UTR
GGAAGCAGAAATACATAGAT+TGG 0.397533 1_2:-77186592 Msa0094100:CDS
CCTTAATCCATGGAGGTGTT+GGG 0.398394 1_2:+77189680 None:intergenic
CAAATTCTTATGAAATGAAT+GGG 0.399467 1_2:-77188139 Msa0094100:CDS
GAGGGAATGTTTCCGAAAGA+TGG 0.402296 1_2:-77186343 Msa0094100:CDS
GTGGATGCACAAACCGCTTC+CGG 0.404075 1_2:-77187916 Msa0094100:CDS
TCTACCTTTAGTAAACTTGC+AGG 0.405913 1_2:+77184114 None:intergenic
AGACTGGAGGCTTGGTTGTA+TGG 0.407943 1_2:-77188262 Msa0094100:CDS
AATTGAGAAGTTGGTGGGGT+TGG 0.409442 1_2:+77189644 None:intergenic
TCTCTTGAAATGCAGCGAAT+TGG 0.421198 1_2:-77185197 Msa0094100:CDS
TTGATAAGATGTTGCTTCAA+AGG 0.424384 1_2:-77189336 Msa0094100:CDS
ACAAATTCTTATGAAATGAA+TGG 0.425425 1_2:-77188140 Msa0094100:CDS
CACAAGACTCAAACTCAAAT+GGG 0.432739 1_2:-77189514 Msa0094100:CDS
CGGTTAAAGCTTTATCAGAA+TGG 0.434311 1_2:+77189596 None:intergenic
TTCAGTTGATCAACTAAAAG+AGG 0.439124 1_2:-77185315 Msa0094100:CDS
AGCCCGGTAAAGATCACCTT+TGG 0.445068 1_2:+77188103 None:intergenic
TGACAGAACATGAATAGTTA+AGG 0.445167 1_2:+77189824 None:intergenic
GGAAGAAACAGAGGACTTCA+AGG 0.448661 1_2:-77187375 Msa0094100:CDS
AGCTTCCTTTCTGTTCTGAA+GGG 0.450978 1_2:+77184558 None:intergenic
ACCTATAAGTTGACCTCTAA+AGG 0.453583 1_2:-77188203 Msa0094100:CDS
GAACACTGCAGTTGGGTTTG+AGG 0.454406 1_2:-77189883 None:intergenic
ATGGTGAACTAACATACTTC+AGG 0.455560 1_2:-77187806 Msa0094100:CDS
GGCTGCAATAATGAGGATTT+GGG 0.455647 1_2:-77189302 Msa0094100:CDS
TGAATCAAATTAAAAGGACT+TGG 0.457350 1_2:-77189243 Msa0094100:CDS
CAACGTTGGAATTGAGAAGT+TGG 0.460578 1_2:+77189635 None:intergenic
GATGCTCTTGTGGTTTATAG+AGG 0.463981 1_2:-77188230 Msa0094100:CDS
TTAAGGAAGAGCATGATGAT+AGG 0.469067 1_2:+77189841 None:intergenic
AGAAATACATAGATTGGAAA+AGG 0.471066 1_2:-77186586 Msa0094100:CDS
AAGAGTGGAGCAATTGAAGT+GGG 0.476149 1_2:-77184050 Msa0094100:three_prime_UTR
GGACAAAATGAGTTGGTAAA+GGG 0.481242 1_2:+77187772 None:intergenic
TGGTGGGGTTGGAGAAGAAG+AGG 0.482517 1_2:+77189655 None:intergenic
AGATGTTGCTTCAAAGGTTG+AGG 0.483659 1_2:-77189330 Msa0094100:CDS
CTAAGTGGTGGCTCAAATCC+AGG 0.484554 1_2:+77187864 None:intergenic
CCGGTTGGTAGTTCATATCA+TGG 0.485424 1_2:+77188009 None:intergenic
CATCGTTGTTAGGAATTGAA+AGG 0.489962 1_2:+77189731 None:intergenic
TGGGTCAAGGTTAAGAAAGC+TGG 0.496953 1_2:-77189283 Msa0094100:CDS
ATGTGTGAATAGACGAAGAC+TGG 0.497375 1_2:-77188278 Msa0094100:intron
ATCGTTGTTAGGAATTGAAA+GGG 0.505389 1_2:+77189732 None:intergenic
ATGCTGCATGGAAACCTTGT+GGG 0.509671 1_2:-77186401 Msa0094100:CDS
AGGACAAAATGAGTTGGTAA+AGG 0.510409 1_2:+77187771 None:intergenic
TCGGTAGCTCACTTGTCCTT+CGG 0.511024 1_2:+77188072 None:intergenic
TGCTGACTTACTTCCAGAAG+TGG 0.511939 1_2:-77187889 Msa0094100:CDS
ATCAAATTAAAAGGACTTGG+AGG 0.513431 1_2:-77189240 Msa0094100:CDS
GTACTAGTGCCTTGTGGCAG+TGG 0.514883 1_2:+77186699 None:intergenic
AGGGAATGTTTCCGAAAGAT+GGG 0.515126 1_2:-77186342 Msa0094100:CDS
GACCTCGCTTCATTGATTGG+TGG 0.516515 1_2:-77187935 Msa0094100:CDS
TTTGGTAGAGAGGAGAGAGT+TGG 0.517591 1_2:-77186799 Msa0094100:CDS
TGTAGATTTAAGCATTCCAC+TGG 0.519150 1_2:-77186613 Msa0094100:CDS
GAGTTGCAGATTTGGTAGAG+AGG 0.521081 1_2:-77186809 Msa0094100:CDS
CCGGAGGTGTTCTATTGTTG+CGG 0.523890 1_2:-77186881 Msa0094100:CDS
TTTGAGTTTGAGTCTTGTGA+AGG 0.523941 1_2:+77189518 None:intergenic
TGAGACAAAGAGTATAATGA+AGG 0.532852 1_2:+77183864 None:intergenic
CCATGATATGAACTACCAAC+CGG 0.535035 1_2:-77188009 Msa0094100:CDS
TCATACAATGATCCGTTGGC+CGG 0.535765 1_2:+77187990 None:intergenic
TGGGTTTGTTGTGATTAAGG+TGG 0.537155 1_2:+77189758 None:intergenic
AATAATGAGGATTTGGGTCA+AGG 0.537678 1_2:-77189296 Msa0094100:CDS
TGGAAGGACTACATCAGCAT+TGG 0.537908 1_2:-77185439 Msa0094100:CDS
TCCTTCGGTCGGATTCAGCC+CGG 0.541690 1_2:+77188087 None:intergenic
AATAATGACAGATGAGGAGA+GGG 0.543945 1_2:-77186361 Msa0094100:CDS
GAGTAAGAAGGATGCTCTTG+TGG 0.546986 1_2:-77188240 Msa0094100:CDS
CCGGTAAAGATCACCTTTGG+TGG 0.548349 1_2:+77188106 None:intergenic
TACATCAGCATTGGAAACAC+AGG 0.550297 1_2:-77185430 Msa0094100:CDS
CTGGATTTGAGCCACCACTT+AGG 0.551182 1_2:-77187863 Msa0094100:CDS
GGAAGTAAGTCAGCATCTAC+CGG 0.551218 1_2:+77187897 None:intergenic
TGAAATGAATGGGGTGAAGT+TGG 0.553356 1_2:-77188129 Msa0094100:CDS
ATATCCTGCAAGTTTACTAA+AGG 0.553688 1_2:-77184118 Msa0094100:three_prime_UTR
ACAATGATCCGTTGGCCGGT+TGG 0.555202 1_2:+77187994 None:intergenic
CACCAAAGGTGATCTTTACC+GGG 0.561416 1_2:-77188105 Msa0094100:CDS
CGTTGGAATTGAGAAGTTGG+TGG 0.561714 1_2:+77189638 None:intergenic
AAGTCAGCATCTACCGGAAG+CGG 0.561775 1_2:+77187903 None:intergenic
GGAAACCCTTCAGAACAGAA+AGG 0.562622 1_2:-77184563 Msa0094100:CDS
ATAGACGAAGACTGGAGGCT+TGG 0.562869 1_2:-77188270 Msa0094100:intron
TCAAATCCCCAACACCTCCA+TGG 0.565297 1_2:-77189687 Msa0094100:CDS
CTTAATCCATGGAGGTGTTG+GGG 0.565363 1_2:+77189681 None:intergenic
TAGCTCACTTGTCCTTCGGT+CGG 0.566433 1_2:+77188076 None:intergenic
CTATGTATTTCTGCTTCCAG+TGG 0.569716 1_2:+77186597 None:intergenic
GGACAAGTGAGCTACCGAGC+TGG 0.570538 1_2:-77188067 Msa0094100:CDS
AATCTGCAACTCTTCTTGGA+AGG 0.570803 1_2:+77186820 None:intergenic
AGAAGAGGAGCCTTAATCCA+TGG 0.571644 1_2:+77189670 None:intergenic
GGTTCTACGAAGATTGATAC+CGG 0.571897 1_2:-77188182 Msa0094100:CDS
GTTGGAATTGAGAAGTTGGT+GGG 0.573563 1_2:+77189639 None:intergenic
CCAAAAGAAAAGCACTGCGC+AGG 0.574059 1_2:-77185220 Msa0094100:CDS
ATGTCTTATCTCGTCAAACA+TGG 0.574729 1_2:+77184454 None:intergenic
ACCTTCTCATCTCTCTCCCA+TGG 0.576203 1_2:+77189412 None:intergenic
TTACAACATATTTAACCACT+AGG 0.580124 1_2:+77183892 None:intergenic
CCACTTGTACTAGTGCCTTG+TGG 0.580623 1_2:+77186693 None:intergenic
CTTGGTTGTATGGAGTAAGA+AGG 0.580712 1_2:-77188252 Msa0094100:CDS
TATCAAAGTTAAATGCTGCA+TGG 0.581587 1_2:-77186413 Msa0094100:CDS
AACAATGGCCAATGAACTGA+AGG 0.583461 1_2:-77187265 Msa0094100:CDS
CCACAAGGCACTAGTACAAG+TGG 0.584885 1_2:-77186693 Msa0094100:CDS
GAATGTGATAGATTATTGGA+TGG 0.585774 1_2:-77187963 Msa0094100:CDS
CGATGCAGAGACTAATCAGT+CGG 0.586060 1_2:-77185388 Msa0094100:CDS
GGGGTGAAGTTGGCCACCAA+AGG 0.586877 1_2:-77188119 Msa0094100:CDS
TCAGTTGATCAACTAAAAGA+GGG 0.588894 1_2:-77185314 Msa0094100:CDS
CCGCAACAATAGAACACCTC+CGG 0.589976 1_2:+77186881 None:intergenic
AAATACTGACAATGAAACAA+TGG 0.590018 1_2:-77187280 Msa0094100:CDS
CCAACGGATCATTGTATGAG+AGG 0.593283 1_2:-77187986 Msa0094100:CDS
GAAAATAGAGAGATCAACAA+TGG 0.596405 1_2:-77186439 Msa0094100:CDS
ATGAACTACCAACCGGCCAA+CGG 0.597987 1_2:-77188002 Msa0094100:CDS
TTGTGGGGAGGATGTAGACT+TGG 0.598453 1_2:-77186385 Msa0094100:CDS
TCATGCTAGTGCAAAACTAA+CGG 0.599022 1_2:-77187829 Msa0094100:CDS
GAGGACTAATGAGCTTGCCA+TGG 0.601370 1_2:-77189221 Msa0094100:CDS
GCCATGGGAGAGAGATGAGA+AGG 0.603189 1_2:-77189413 Msa0094100:CDS
TTTACAATACAGCGTCTCAC+CGG 0.606010 1_2:-77186900 Msa0094100:intron
AGAGTGGAGCAATTGAAGTG+GGG 0.606742 1_2:-77184049 Msa0094100:three_prime_UTR
GATGCAGAGACTAATCAGTC+GGG 0.607705 1_2:-77185387 Msa0094100:CDS
GAGAAAAGAAAGAATGCCAT+GGG 0.608902 1_2:-77189428 Msa0094100:CDS
GAAACACAGGGAAGTAGCAA+AGG 0.609709 1_2:-77185417 Msa0094100:CDS
TAAGAGTGGAGCAATTGAAG+TGG 0.609964 1_2:-77184051 Msa0094100:three_prime_UTR
TGAAAAGCTATTCTGCAATG+AGG 0.610254 1_2:-77184159 Msa0094100:three_prime_UTR
CAGCTGCTATCTTAAAGCTG+TGG 0.612102 1_2:-77187347 Msa0094100:CDS
AAGTCTACATCCTCCCCACA+AGG 0.613319 1_2:+77186387 None:intergenic
TGAGAAAAGAAAGAATGCCA+TGG 0.614089 1_2:-77189429 Msa0094100:CDS
ACAACGAGTGCAGGAAGGCG+AGG 0.620373 1_2:-77185479 Msa0094100:intron
GGAGTGAGGCTGCAATAATG+AGG 0.620980 1_2:-77189309 Msa0094100:CDS
AAATAATGACAGATGAGGAG+AGG 0.621976 1_2:-77186362 Msa0094100:CDS
CCTCTCATACAATGATCCGT+TGG 0.622332 1_2:+77187986 None:intergenic
CTTGGAAATAATGACAGATG+AGG 0.623535 1_2:-77186367 Msa0094100:CDS
ACCGGGCTGAATCCGACCGA+AGG 0.623725 1_2:-77188088 Msa0094100:CDS
GCTTCAAAGGTTGAGGAGTG+AGG 0.624670 1_2:-77189323 Msa0094100:CDS
CAACGGATCATTGTATGAGA+GGG 0.624749 1_2:-77187985 Msa0094100:CDS
AGGGATATCAAATTTAACCA+TGG 0.630866 1_2:+77189204 None:intergenic
TATGCTATTATTATTTACCG+CGG 0.638178 1_2:-77185290 Msa0094100:CDS
TAGAGCAAGAGAAATTGTTG+AGG 0.641903 1_2:-77189164 Msa0094100:intron
CTACCAAGGACAAAATGAGT+TGG 0.642184 1_2:+77187765 None:intergenic
TGAGGTGGACAAATCCTAAG+TGG 0.647015 1_2:+77187849 None:intergenic
GCTAGTGCAAAACTAACGGA+TGG 0.650095 1_2:-77187825 Msa0094100:CDS
GATGAATTTCCACTGCCACA+AGG 0.650989 1_2:-77186708 Msa0094100:CDS
ACAATACAGCGTCTCACCGG+AGG 0.657945 1_2:-77186897 Msa0094100:intron
TAATATGAAGGAAGAAACAG+AGG 0.658565 1_2:-77187384 Msa0094100:intron
AAATTTGATGGAGAATGAGA+AGG 0.659976 1_2:-77189455 Msa0094100:CDS
TTATGATCAGCATTCCAGCT+CGG 0.662414 1_2:+77188053 None:intergenic
ACGTTGTTTAGGTTCAACGT+TGG 0.664634 1_2:+77189621 None:intergenic
GTGGGGTTTCACTTTCAGAG+TGG 0.670111 1_2:-77184032 Msa0094100:three_prime_UTR
GGTGGACAAATCCTAAGTGG+TGG 0.675074 1_2:+77187852 None:intergenic
AATGCTGCATGGAAACCTTG+TGG 0.675790 1_2:-77186402 Msa0094100:CDS
GTGAACTAACATACTTCAGG+AGG 0.677696 1_2:-77187803 Msa0094100:CDS
TTGGAATTGAGAAGTTGGTG+GGG 0.677831 1_2:+77189640 None:intergenic
TGTGAATAGACGAAGACTGG+AGG 0.684763 1_2:-77188275 Msa0094100:intron
AAATTCTTATGAAATGAATG+GGG 0.694235 1_2:-77188138 Msa0094100:CDS
ATCCACCAATCAATGAAGCG+AGG 0.697082 1_2:+77187933 None:intergenic
AACTTGACGAAGAAGTTGCG+CGG 0.705282 1_2:-77186761 Msa0094100:CDS
TGCATGGAAACCTTGTGGGG+AGG 0.708298 1_2:-77186397 Msa0094100:CDS
ACATCAGCATTGGAAACACA+GGG 0.713546 1_2:-77185429 Msa0094100:CDS
TGCTGCATGGAAACCTTGTG+GGG 0.716899 1_2:-77186400 Msa0094100:CDS
AGAGGAGCCTTAATCCATGG+AGG 0.743209 1_2:+77189673 None:intergenic
TTAACCGGTAAAGAACTCAG+AGG 0.763387 1_2:-77189580 Msa0094100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTCTTAAATTAAATAATATA+TGG - chr1_2:77187224-77187243 Msa0094100:intron 10.0%
!!! ATTAAAAGTTTGTAATTTTA+GGG - chr1_2:77187869-77187888 Msa0094100:CDS 10.0%
!! ATTCAATTAATCATAATTGT+TGG + chr1_2:77184926-77184945 None:intergenic 15.0%
!! CGTAAAAAATGTTATATTAT+CGG - chr1_2:77184952-77184971 Msa0094100:intron 15.0%
!! AATATACATCATCTTAAAAA+GGG - chr1_2:77186072-77186091 Msa0094100:intron 15.0%
!! TTGTAAATTAATAAATGCTT+TGG - chr1_2:77186208-77186227 Msa0094100:intron 15.0%
!!! ATTTTCTATCTTTAATATGA+AGG - chr1_2:77186306-77186325 Msa0094100:intron 15.0%
!! TTGTATTAATTTCAAATGAT+TGG - chr1_2:77186581-77186600 Msa0094100:CDS 15.0%
!!! GTAAAATTTTCTCAATAATT+AGG + chr1_2:77187578-77187597 None:intergenic 15.0%
!!! ATTATTGAGAAAATTTTACA+AGG - chr1_2:77187579-77187598 Msa0094100:intron 15.0%
!!! AAATATTTTTTACAGATTCA+GGG + chr1_2:77187745-77187764 None:intergenic 15.0%
!!! TAAATATTTTTTACAGATTC+AGG + chr1_2:77187746-77187765 None:intergenic 15.0%
!!! AAAATTACAAACTTTTAATC+AGG + chr1_2:77187868-77187887 None:intergenic 15.0%
!!! GATTAAAAGTTTGTAATTTT+AGG - chr1_2:77187868-77187887 Msa0094100:CDS 15.0%
!!! AATATTTTCTTTTGATTCAA+TGG + chr1_2:77188013-77188032 None:intergenic 15.0%
!! TTAATGAAAAATACGTATAA+AGG + chr1_2:77188599-77188618 None:intergenic 15.0%
!!! TTGGATTAACATTTTAATAT+AGG + chr1_2:77189387-77189406 None:intergenic 15.0%
!! ATGTTGTGAATCAAATTAAA+AGG - chr1_2:77184453-77184472 Msa0094100:three_prime_UTR 20.0%
!!! TATCCATATTTTGACATAAA+GGG + chr1_2:77184520-77184539 None:intergenic 20.0%
!! CTGGAAATTTGTATATAAAT+GGG - chr1_2:77185165-77185184 Msa0094100:intron 20.0%
!! ACAAATTCTTATGAAATGAA+TGG - chr1_2:77185562-77185581 Msa0094100:intron 20.0%
!! CAAATTCTTATGAAATGAAT+GGG - chr1_2:77185563-77185582 Msa0094100:intron 20.0%
!! AAATTCTTATGAAATGAATG+GGG - chr1_2:77185564-77185583 Msa0094100:intron 20.0%
!!! CTTTTTAAGATGATGTATAT+TGG + chr1_2:77186073-77186092 None:intergenic 20.0%
!! CAATATACATCATCTTAAAA+AGG - chr1_2:77186071-77186090 Msa0094100:intron 20.0%
!! ATAAGGAAATCATAATTAGT+TGG - chr1_2:77186185-77186204 Msa0094100:intron 20.0%
!!! TGAAAATTTACTTTTCATTG+TGG - chr1_2:77186470-77186489 Msa0094100:intron 20.0%
!!! GAAAATTTACTTTTCATTGT+GGG - chr1_2:77186471-77186490 Msa0094100:intron 20.0%
!! AACATCAAAGTTATTCTTAT+TGG + chr1_2:77186783-77186802 None:intergenic 20.0%
!!! AGTTTTACATACTACTATAT+AGG - chr1_2:77186848-77186867 Msa0094100:CDS 20.0%
!!! GTTTTACATACTACTATATA+GGG - chr1_2:77186849-77186868 Msa0094100:CDS 20.0%
!!! TTTTACATACTACTATATAG+GGG - chr1_2:77186850-77186869 Msa0094100:CDS 20.0%
!! AAAAAAAAACGCAACAAAAA+AGG + chr1_2:77187478-77187497 None:intergenic 20.0%
!!! TTTTTGTTGCGTTTTTTTTT+TGG - chr1_2:77187478-77187497 Msa0094100:intron 20.0%
!!! TATTGATAATGTAGAGAAAT+AGG + chr1_2:77187710-77187729 None:intergenic 20.0%
!! TTTGGAAAGATAAGTATTAA+TGG + chr1_2:77188142-77188161 None:intergenic 20.0%
!!! TAAATATAATAGCAGCATTT+TGG + chr1_2:77188160-77188179 None:intergenic 20.0%
!! AAAATACGTATAAAGGAAAT+AGG + chr1_2:77188592-77188611 None:intergenic 20.0%
!! TACAGACAATATTCATTTAA+AGG - chr1_2:77188938-77188957 Msa0094100:intron 20.0%
!!! GAGATTCTTTTTACAATTTT+AGG - chr1_2:77189118-77189137 Msa0094100:intron 20.0%
!!! GCATTAATTTTAATATTGTC+TGG + chr1_2:77189174-77189193 None:intergenic 20.0%
!!! AATGTTTTTGTTTATAAGAG+TGG - chr1_2:77189637-77189656 Msa0094100:CDS 20.0%
!!! CATAAATATTTTTTACCTAG+TGG - chr1_2:77189795-77189814 Msa0094100:CDS 20.0%
! TCTCAAAAAGTTGAAAACTT+TGG - chr1_2:77184212-77184231 Msa0094100:intron 25.0%
! CTCAAAAAGTTGAAAACTTT+GGG - chr1_2:77184213-77184232 Msa0094100:intron 25.0%
!!! TAATCTTTTGAAGGTGAAAA+AGG - chr1_2:77184313-77184332 Msa0094100:intron 25.0%
! TGAATCAAATTAAAAGGACT+TGG - chr1_2:77184459-77184478 Msa0094100:three_prime_UTR 25.0%
! TATCCCTTTATGTCAAAATA+TGG - chr1_2:77184514-77184533 Msa0094100:three_prime_UTR 25.0%
!!! CTATCCATATTTTGACATAA+AGG + chr1_2:77184521-77184540 None:intergenic 25.0%
! TAACAATGTGTTTATAAGTG+AGG + chr1_2:77184792-77184811 None:intergenic 25.0%
! GCTGGAAATTTGTATATAAA+TGG - chr1_2:77185164-77185183 Msa0094100:intron 25.0%
!!! CATCTTAAAATTTTGGTTGA+GGG + chr1_2:77185197-77185216 None:intergenic 25.0%
!! GTGATACCATCTTAAAATTT+TGG + chr1_2:77185204-77185223 None:intergenic 25.0%
!!! TTGACTTGTAGATAGTTATT+CGG - chr1_2:77185342-77185361 Msa0094100:CDS 25.0%
! AATATATCCATCGCATAATA+TGG + chr1_2:77185392-77185411 None:intergenic 25.0%
!!! TAAGAATTTGTTTTTCGACT+AGG + chr1_2:77185553-77185572 None:intergenic 25.0%
!! CAAGAATAGTTGATTTAAGA+AGG - chr1_2:77186141-77186160 Msa0094100:intron 25.0%
!! AATAGTTGATTTAAGAAGGA+TGG - chr1_2:77186145-77186164 Msa0094100:intron 25.0%
! CTCAATCAGTAACTTTAATA+AGG - chr1_2:77186168-77186187 Msa0094100:intron 25.0%
!!! TTAATAAATGCTTTGGAGTA+TGG - chr1_2:77186215-77186234 Msa0094100:intron 25.0%
! AAATACTGACAATGAAACAA+TGG - chr1_2:77186422-77186441 Msa0094100:CDS 25.0%
! AGTCAATGATATCATGTATA+CGG - chr1_2:77186528-77186547 Msa0094100:intron 25.0%
! CTAATCTAAACAAACATTGT+TGG + chr1_2:77186652-77186671 None:intergenic 25.0%
! AGAAATACATAGATTGGAAA+AGG - chr1_2:77187116-77187135 Msa0094100:intron 25.0%
! CAGAATATAACAAATGCAAA+GGG + chr1_2:77187199-77187218 None:intergenic 25.0%
! ACAGAATATAACAAATGCAA+AGG + chr1_2:77187200-77187219 None:intergenic 25.0%
!! TGGTAGTTTGTAATTATCAA+AGG + chr1_2:77187610-77187629 None:intergenic 25.0%
!!! ATAATTTTAGGGACCAAAAT+GGG + chr1_2:77187676-77187695 None:intergenic 25.0%
!!! TATAATTTTAGGGACCAAAA+TGG + chr1_2:77187677-77187696 None:intergenic 25.0%
!!! TTGATGGTCGTATAATTTTA+GGG + chr1_2:77187687-77187706 None:intergenic 25.0%
!!! TATTGATAATGCAGAGTATT+AGG - chr1_2:77187905-77187924 Msa0094100:CDS 25.0%
! AATTTCGTCCTTATTATTGT+AGG + chr1_2:77187941-77187960 None:intergenic 25.0%
! TACAATAATAAGGACGAAAT+TGG - chr1_2:77187940-77187959 Msa0094100:CDS 25.0%
!!! TTTCTTTTGATTCAATGGTT+AGG + chr1_2:77188008-77188027 None:intergenic 25.0%
! TATGCTATTATTATTTACCG+CGG - chr1_2:77188412-77188431 Msa0094100:intron 25.0%
!! GCAAATTTTCAATCAAAACT+AGG + chr1_2:77188567-77188586 None:intergenic 25.0%
!!! TCATTTTCAAGCATAGATAT+TGG + chr1_2:77188737-77188756 None:intergenic 25.0%
! CACTATATATTTATGACGAT+GGG + chr1_2:77188896-77188915 None:intergenic 25.0%
! TCACTATATATTTATGACGA+TGG + chr1_2:77188897-77188916 None:intergenic 25.0%
!! GAACTAATATTTCTATCCAA+AGG + chr1_2:77189423-77189442 None:intergenic 25.0%
!! TAAATTTTGCTGGCATTTAA+AGG + chr1_2:77189724-77189743 None:intergenic 25.0%
!! TCATCTTTCATAAATTTTGC+TGG + chr1_2:77189734-77189753 None:intergenic 25.0%
! TTACAACATATTTAACCACT+AGG + chr1_2:77189813-77189832 None:intergenic 25.0%
TGACAGAACATGAATAGTTA+AGG + chr1_2:77183881-77183900 None:intergenic 30.0%
!! AATTGGGTTTGTTGTGATTA+AGG + chr1_2:77183950-77183969 None:intergenic 30.0%
TTAGGAATTGAAAGGGAATT+GGG + chr1_2:77183966-77183985 None:intergenic 30.0%
ATCGTTGTTAGGAATTGAAA+GGG + chr1_2:77183973-77183992 None:intergenic 30.0%
ACATTATCATCATCGTTGTT+AGG + chr1_2:77183984-77184003 None:intergenic 30.0%
! CATTCTGATAAAGCTTTAAC+CGG - chr1_2:77184107-77184126 Msa0094100:three_prime_UTR 30.0%
!! TTTGTGGGCTATTTTCTTTA+AGG + chr1_2:77184156-77184175 None:intergenic 30.0%
! GTCTAGTTTGGAAAATTTGA+TGG - chr1_2:77184235-77184254 Msa0094100:intron 30.0%
AAATTTGATGGAGAATGAGA+AGG - chr1_2:77184247-77184266 Msa0094100:intron 30.0%
! TGAGAAGGTTAATCTTTTGA+AGG - chr1_2:77184304-77184323 Msa0094100:intron 30.0%
! TTGATAAGATGTTGCTTCAA+AGG - chr1_2:77184366-77184385 Msa0094100:intron 30.0%
ATCAAATTAAAAGGACTTGG+AGG - chr1_2:77184462-77184481 Msa0094100:three_prime_UTR 30.0%
AGGGATATCAAATTTAACCA+TGG + chr1_2:77184501-77184520 None:intergenic 30.0%
TCTGATACCATGTTAAACTT+TGG - chr1_2:77184718-77184737 Msa0094100:intron 30.0%
CTGATACCATGTTAAACTTT+GGG - chr1_2:77184719-77184738 Msa0094100:intron 30.0%
ACATACTAGCAAAACTAGTT+TGG + chr1_2:77185016-77185035 None:intergenic 30.0%
ATTCAACGAGTTAGTTATAG+AGG + chr1_2:77185072-77185091 None:intergenic 30.0%
!!! CCATCTTAAAATTTTGGTTG+AGG + chr1_2:77185198-77185217 None:intergenic 30.0%
!! CCTCAACCAAAATTTTAAGA+TGG - chr1_2:77185195-77185214 Msa0094100:intron 30.0%
CATACAGCTAATTATGCATA+AGG + chr1_2:77185286-77185305 None:intergenic 30.0%
! TTTTCGACTAGGAATATAAC+CGG + chr1_2:77185542-77185561 None:intergenic 30.0%
GAATGTGATAGATTATTGGA+TGG - chr1_2:77185739-77185758 Msa0094100:intron 30.0%
GATAGATTATTGGATGGTTT+AGG - chr1_2:77185745-77185764 Msa0094100:intron 30.0%
TTATGCTTGATGCTGAAAAA+AGG - chr1_2:77186035-77186054 Msa0094100:intron 30.0%
TATGCTTGATGCTGAAAAAA+GGG - chr1_2:77186036-77186055 Msa0094100:intron 30.0%
TTCTTGATACCAATACTTCT+AGG + chr1_2:77186127-77186146 None:intergenic 30.0%
TAATTAGCCATATGCATACA+AGG + chr1_2:77186282-77186301 None:intergenic 30.0%
TAATATGAAGGAAGAAACAG+AGG - chr1_2:77186318-77186337 Msa0094100:CDS 30.0%
GCAAAAATTGCAATCAAGTA+TGG - chr1_2:77186393-77186412 Msa0094100:CDS 30.0%
GTCAATGATATCATGTATAC+GGG - chr1_2:77186529-77186548 Msa0094100:intron 30.0%
! TGTTTTATGTTCAATAGTCG+CGG - chr1_2:77186682-77186701 Msa0094100:CDS 30.0%
TTGTGTATTAGTTCATGTAC+TGG - chr1_2:77186735-77186754 Msa0094100:CDS 30.0%
GTGGAACTTTAACAGAATTT+AGG - chr1_2:77187028-77187047 Msa0094100:intron 30.0%
! TCATTTCGTCAAGCTTATTT+TGG + chr1_2:77187059-77187078 None:intergenic 30.0%
AAAGCTTTCATTGTGAGATT+TGG - chr1_2:77187159-77187178 Msa0094100:intron 30.0%
GAAAATAGAGAGATCAACAA+TGG - chr1_2:77187263-77187282 Msa0094100:CDS 30.0%
TATCAAAGTTAAATGCTGCA+TGG - chr1_2:77187289-77187308 Msa0094100:CDS 30.0%
TTCTTAGCAATTCAATGTCA+TGG - chr1_2:77187526-77187545 Msa0094100:intron 30.0%
AAATGGGTATTTAATCTACC+CGG + chr1_2:77187660-77187679 None:intergenic 30.0%
! GGTAGATTAAATACCCATTT+TGG - chr1_2:77187660-77187679 Msa0094100:intron 30.0%
!!! GTTGATGGTCGTATAATTTT+AGG + chr1_2:77187688-77187707 None:intergenic 30.0%
! AATGTAGAGAAATAGGTTGA+TGG + chr1_2:77187703-77187722 None:intergenic 30.0%
TCTCTCTGTTGATATTTGTA+GGG - chr1_2:77187779-77187798 Msa0094100:CDS 30.0%
TACCAATTTAGTTGTCAACA+CGG + chr1_2:77188084-77188103 None:intergenic 30.0%
! CATCTACACTTCACAATTTT+TGG - chr1_2:77188339-77188358 Msa0094100:intron 30.0%
TTCAGTTGATCAACTAAAAG+AGG - chr1_2:77188387-77188406 Msa0094100:intron 30.0%
TCAGTTGATCAACTAAAAGA+GGG - chr1_2:77188388-77188407 Msa0094100:intron 30.0%
! TTTTTCGCTATCTTTTCTGA+CGG + chr1_2:77188454-77188473 None:intergenic 30.0%
TTTAACCTGTGAAAAAACCT+AGG + chr1_2:77188813-77188832 None:intergenic 30.0%
! GAAACACGACACTTATATTT+TGG - chr1_2:77188997-77189016 Msa0094100:intron 30.0%
!! ACGACACTTATATTTTGGAA+CGG - chr1_2:77189002-77189021 Msa0094100:intron 30.0%
!! GTTTTCTGGTCAAATGAAAA+GGG + chr1_2:77189058-77189077 None:intergenic 30.0%
AAGAATCTCAGTTATACAGT+AGG + chr1_2:77189107-77189126 None:intergenic 30.0%
CAAAGGTAGAAGATTGATAT+TGG + chr1_2:77189406-77189425 None:intergenic 30.0%
CAATATCAATCTTCTACCTT+TGG - chr1_2:77189404-77189423 Msa0094100:CDS 30.0%
! GTTTTCTTAGAGAAATGAAG+AGG - chr1_2:77189494-77189513 Msa0094100:CDS 30.0%
ATATCCTGCAAGTTTACTAA+AGG - chr1_2:77189584-77189603 Msa0094100:CDS 30.0%
! TGAGACAAAGAGTATAATGA+AGG + chr1_2:77189841-77189860 None:intergenic 30.0%
ATACTCTTTGTCTCATGATA+AGG - chr1_2:77189846-77189865 Msa0094100:exon 30.0%
! TTAAGGAAGAGCATGATGAT+AGG + chr1_2:77183864-77183883 None:intergenic 35.0%
GTTAGGAATTGAAAGGGAAT+TGG + chr1_2:77183967-77183986 None:intergenic 35.0%
CATCGTTGTTAGGAATTGAA+AGG + chr1_2:77183974-77183993 None:intergenic 35.0%
! CGGTTAAAGCTTTATCAGAA+TGG + chr1_2:77184109-77184128 None:intergenic 35.0%
! TTTGAGTTTGAGTCTTGTGA+AGG + chr1_2:77184187-77184206 None:intergenic 35.0%
TCACAAGACTCAAACTCAAA+TGG - chr1_2:77184187-77184206 Msa0094100:three_prime_UTR 35.0%
CACAAGACTCAAACTCAAAT+GGG - chr1_2:77184188-77184207 Msa0094100:three_prime_UTR 35.0%
TGAAAACTTTGGGTCTAGTT+TGG - chr1_2:77184223-77184242 Msa0094100:intron 35.0%
TGAGAAAAGAAAGAATGCCA+TGG - chr1_2:77184273-77184292 Msa0094100:intron 35.0%
GAGAAAAGAAAGAATGCCAT+GGG - chr1_2:77184274-77184293 Msa0094100:intron 35.0%
AATAATGAGGATTTGGGTCA+AGG - chr1_2:77184406-77184425 Msa0094100:intron 35.0%
TAGAGCAAGAGAAATTGTTG+AGG - chr1_2:77184538-77184557 Msa0094100:exon 35.0%
GATAAGAGTAGAGAGAAAGA+AGG + chr1_2:77184568-77184587 None:intergenic 35.0%
! GCAGTTTTTACCTTACAAGT+CGG + chr1_2:77184609-77184628 None:intergenic 35.0%
TGCTCCAAATGTATATGTGA+GGG + chr1_2:77184631-77184650 None:intergenic 35.0%
ATGCTCCAAATGTATATGTG+AGG + chr1_2:77184632-77184651 None:intergenic 35.0%
! TCAAAGTGACTTGATAGCAT+AGG - chr1_2:77184654-77184673 Msa0094100:intron 35.0%
! CAAAGTGACTTGATAGCATA+GGG - chr1_2:77184655-77184674 Msa0094100:intron 35.0%
! AAAGTGACTTGATAGCATAG+GGG - chr1_2:77184656-77184675 Msa0094100:intron 35.0%
GTCTAACCCAAAGTTTAACA+TGG + chr1_2:77184728-77184747 None:intergenic 35.0%
!! TTAGATGAGTGATGGACTAA+TGG + chr1_2:77184817-77184836 None:intergenic 35.0%
CTTAAAAGTCATACAGATGC+TGG + chr1_2:77184869-77184888 None:intergenic 35.0%
! CAGCATCTGTATGACTTTTA+AGG - chr1_2:77184867-77184886 Msa0094100:intron 35.0%
TTGTCAAGTTCCGCATTAAA+TGG - chr1_2:77185134-77185153 Msa0094100:intron 35.0%
TGTCAAGTTCCGCATTAAAT+GGG - chr1_2:77185135-77185154 Msa0094100:intron 35.0%
TTCCGCATTAAATGGGATAT+GGG - chr1_2:77185142-77185161 Msa0094100:intron 35.0%
TATCCATCGCATAATATGGA+AGG + chr1_2:77185388-77185407 None:intergenic 35.0%
! ACCTATAAGTTGACCTCTAA+AGG - chr1_2:77185499-77185518 Msa0094100:intron 35.0%
! ACCTTTAGAGGTCAACTTAT+AGG + chr1_2:77185503-77185522 None:intergenic 35.0%
AATCTTCGTAGAACCTTTAG+AGG + chr1_2:77185515-77185534 None:intergenic 35.0%
GAGGGAATGTGATAGATTAT+TGG - chr1_2:77185735-77185754 Msa0094100:intron 35.0%
TCATGCTAGTGCAAAACTAA+CGG - chr1_2:77185873-77185892 Msa0094100:intron 35.0%
ATGGTGAACTAACATACTTC+AGG - chr1_2:77185896-77185915 Msa0094100:intron 35.0%
!! GGACAAAATGAGTTGGTAAA+GGG + chr1_2:77185933-77185952 None:intergenic 35.0%
!! AGGACAAAATGAGTTGGTAA+AGG + chr1_2:77185934-77185953 None:intergenic 35.0%
! TTACCAACTCATTTTGTCCT+TGG - chr1_2:77185934-77185953 Msa0094100:intron 35.0%
ATTGAAGAACTGCATCAAGA+AGG + chr1_2:77185969-77185988 None:intergenic 35.0%
ATCAATCTACAACGCATACA+TGG - chr1_2:77186101-77186120 Msa0094100:intron 35.0%
TATCCTTCCTTGTATGCATA+TGG - chr1_2:77186272-77186291 Msa0094100:intron 35.0%
!! TTTACTTTTCATTGTGGGTG+AGG - chr1_2:77186476-77186495 Msa0094100:intron 35.0%
TGCAAGATATCCTAGACTTA+GGG - chr1_2:77186499-77186518 Msa0094100:intron 35.0%
TAATACACAAGCCAAAAGAG+CGG + chr1_2:77186725-77186744 None:intergenic 35.0%
TGTAGATTTAAGCATTCCAC+TGG - chr1_2:77187089-77187108 Msa0094100:intron 35.0%
GGAAGCAGAAATACATAGAT+TGG - chr1_2:77187110-77187129 Msa0094100:intron 35.0%
CTTGGAAATAATGACAGATG+AGG - chr1_2:77187335-77187354 Msa0094100:CDS 35.0%
AAATAATGACAGATGAGGAG+AGG - chr1_2:77187340-77187359 Msa0094100:CDS 35.0%
AATAATGACAGATGAGGAGA+GGG - chr1_2:77187341-77187360 Msa0094100:CDS 35.0%
TCATCTTCAATCCCATCTTT+CGG + chr1_2:77187374-77187393 None:intergenic 35.0%
!! ATGAGAAGTTGTCTAGTTCT+TGG - chr1_2:77187390-77187409 Msa0094100:intron 35.0%
!! AAGTTGTCTAGTTCTTGGTA+AGG - chr1_2:77187395-77187414 Msa0094100:intron 35.0%
TTCACTTCTTGAGTTTCGAT+TGG - chr1_2:77187429-77187448 Msa0094100:intron 35.0%
ACTACCACTTAGTTACAATG+TGG - chr1_2:77187623-77187642 Msa0094100:intron 35.0%
CTCTCTCTGTTGATATTTGT+AGG - chr1_2:77187778-77187797 Msa0094100:CDS 35.0%
TTTAATAACGACACAACCAG+AGG - chr1_2:77187836-77187855 Msa0094100:CDS 35.0%
TTAATAACGACACAACCAGA+GGG - chr1_2:77187837-77187856 Msa0094100:CDS 35.0%
! TAATGCAGAGTATTAGGTTG+AGG - chr1_2:77187911-77187930 Msa0094100:CDS 35.0%
TTGATTCAATGGTTAGGCAA+AGG + chr1_2:77188002-77188021 None:intergenic 35.0%
GTATCTGTACTTAACCACAA+CGG - chr1_2:77188036-77188055 Msa0094100:CDS 35.0%
! AACCGTGTTGACAACTAAAT+TGG - chr1_2:77188079-77188098 Msa0094100:CDS 35.0%
CTTAGAGTGGGAAATATTAC+AGG + chr1_2:77188191-77188210 None:intergenic 35.0%
TGAATGTAGCTTCTTAGAGT+GGG + chr1_2:77188203-77188222 None:intergenic 35.0%
TTGAATGTAGCTTCTTAGAG+TGG + chr1_2:77188204-77188223 None:intergenic 35.0%
!! GTGCTTTTCTTTTGGTTAGA+AGG + chr1_2:77188477-77188496 None:intergenic 35.0%
!!! CAGGCAAATCAGTTTTGAAT+GGG + chr1_2:77188635-77188654 None:intergenic 35.0%
!!! CACTTATATTTTGGAACGGA+AGG - chr1_2:77189006-77189025 Msa0094100:intron 35.0%
GTCAAATGAAAAGGGCAAAA+TGG + chr1_2:77189050-77189069 None:intergenic 35.0%
!! CGTTTTCTGGTCAAATGAAA+AGG + chr1_2:77189059-77189078 None:intergenic 35.0%
TTTCATTTGACCAGAAAACG+TGG - chr1_2:77189059-77189078 Msa0094100:intron 35.0%
TTCATTTGACCAGAAAACGT+GGG - chr1_2:77189060-77189079 Msa0094100:intron 35.0%
ATGTCTTATCTCGTCAAACA+TGG + chr1_2:77189251-77189270 None:intergenic 35.0%
! CTTCAGCAAGCAACATATTT+TGG - chr1_2:77189288-77189307 Msa0094100:CDS 35.0%
TGAAAAGCTATTCTGCAATG+AGG - chr1_2:77189543-77189562 Msa0094100:CDS 35.0%
TCTACCTTTAGTAAACTTGC+AGG + chr1_2:77189591-77189610 None:intergenic 35.0%
!! TGGGTTTGTTGTGATTAAGG+TGG + chr1_2:77183947-77183966 None:intergenic 40.0%
!! TTGGAATTGAGAAGTTGGTG+GGG + chr1_2:77184065-77184084 None:intergenic 40.0%
! GTTGGAATTGAGAAGTTGGT+GGG + chr1_2:77184066-77184085 None:intergenic 40.0%
CAACGTTGGAATTGAGAAGT+TGG + chr1_2:77184070-77184089 None:intergenic 40.0%
! ACGTTGTTTAGGTTCAACGT+TGG + chr1_2:77184084-77184103 None:intergenic 40.0%
TCAGAATGGTCACGTTGTTT+AGG + chr1_2:77184095-77184114 None:intergenic 40.0%
TTAACCGGTAAAGAACTCAG+AGG - chr1_2:77184122-77184141 Msa0094100:three_prime_UTR 40.0%
TTTGCCTCTGAGTTCTTTAC+CGG + chr1_2:77184129-77184148 None:intergenic 40.0%
!! GTGAAGGCTTTCAAGTTTGT+GGG + chr1_2:77184171-77184190 None:intergenic 40.0%
!! TGTGAAGGCTTTCAAGTTTG+TGG + chr1_2:77184172-77184191 None:intergenic 40.0%
GGAAAAAATTGTCACTGCTG+CGG - chr1_2:77184334-77184353 Msa0094100:intron 40.0%
! AGATGTTGCTTCAAAGGTTG+AGG - chr1_2:77184372-77184391 Msa0094100:intron 40.0%
AGGCTGCAATAATGAGGATT+TGG - chr1_2:77184399-77184418 Msa0094100:intron 40.0%
GGCTGCAATAATGAGGATTT+GGG - chr1_2:77184400-77184419 Msa0094100:intron 40.0%
!! AGTGTCAAAACCGACTTGTA+AGG - chr1_2:77184596-77184615 Msa0094100:intron 40.0%
ACTGCCCTCACATATACATT+TGG - chr1_2:77184624-77184643 Msa0094100:intron 40.0%
GAGCCTATCCGAAATATGTT+GGG + chr1_2:77184700-77184719 None:intergenic 40.0%
AGAGCCTATCCGAAATATGT+TGG + chr1_2:77184701-77184720 None:intergenic 40.0%
!! CGACTTTCTAAGGTTCAGTT+AGG + chr1_2:77184750-77184769 None:intergenic 40.0%
! CCTTACAAGTCGACTTTCTA+AGG + chr1_2:77184760-77184779 None:intergenic 40.0%
!! CCTTAGAAAGTCGACTTGTA+AGG - chr1_2:77184757-77184776 Msa0094100:intron 40.0%
AGTCCATCACTCATCTAATG+TGG - chr1_2:77184819-77184838 Msa0094100:intron 40.0%
GTCCATCACTCATCTAATGT+GGG - chr1_2:77184820-77184839 Msa0094100:intron 40.0%
TCCATCACTCATCTAATGTG+GGG - chr1_2:77184821-77184840 Msa0094100:intron 40.0%
!! TACAGATGCTGGTTTGCAAT+TGG + chr1_2:77184858-77184877 None:intergenic 40.0%
GTTCCGCATTAAATGGGATA+TGG - chr1_2:77185141-77185160 Msa0094100:intron 40.0%
AGCCCATATCCCATTTAATG+CGG + chr1_2:77185147-77185166 None:intergenic 40.0%
AGAATCCATCCAAGATTCGT+TGG - chr1_2:77185228-77185247 Msa0094100:CDS 40.0%
ATAGTCCAACGAATCTTGGA+TGG + chr1_2:77185236-77185255 None:intergenic 40.0%
CATCCTTCCATATTATGCGA+TGG - chr1_2:77185382-77185401 Msa0094100:CDS 40.0%
ATGTGTGAATAGACGAAGAC+TGG - chr1_2:77185424-77185443 Msa0094100:CDS 40.0%
CTTGGTTGTATGGAGTAAGA+AGG - chr1_2:77185450-77185469 Msa0094100:CDS 40.0%
GATGCTCTTGTGGTTTATAG+AGG - chr1_2:77185472-77185491 Msa0094100:intron 40.0%
GGTTCTACGAAGATTGATAC+CGG - chr1_2:77185520-77185539 Msa0094100:intron 40.0%
TGAAATGAATGGGGTGAAGT+TGG - chr1_2:77185573-77185592 Msa0094100:intron 40.0%
TTATGATCAGCATTCCAGCT+CGG + chr1_2:77185652-77185671 None:intergenic 40.0%
CCATGATATGAACTACCAAC+CGG - chr1_2:77185693-77185712 Msa0094100:intron 40.0%
CAACGGATCATTGTATGAGA+GGG - chr1_2:77185717-77185736 Msa0094100:intron 40.0%
!!! GTTAGTTTTGCACTAGCATG+AGG + chr1_2:77185874-77185893 None:intergenic 40.0%
GTGAACTAACATACTTCAGG+AGG - chr1_2:77185899-77185918 Msa0094100:intron 40.0%
CTACCAAGGACAAAATGAGT+TGG + chr1_2:77185940-77185959 None:intergenic 40.0%
AAGAACTGCATCAAGAAGGA+GGG + chr1_2:77185965-77185984 None:intergenic 40.0%
! CATACATGGCCTAGAAGTAT+TGG - chr1_2:77186115-77186134 Msa0094100:intron 40.0%
CATACAAGGAAGGATAAGCA+TGG + chr1_2:77186268-77186287 None:intergenic 40.0%
TAGCCATATGCATACAAGGA+AGG + chr1_2:77186278-77186297 None:intergenic 40.0%
AACAATGGCCAATGAACTGA+AGG - chr1_2:77186437-77186456 Msa0094100:CDS 40.0%
GTGCAAGATATCCTAGACTT+AGG - chr1_2:77186498-77186517 Msa0094100:intron 40.0%
! GTTTTCATGTTGCGTTGAGT+TGG - chr1_2:77186557-77186576 Msa0094100:CDS 40.0%
TTTACAATACAGCGTCTCAC+CGG - chr1_2:77186802-77186821 Msa0094100:CDS 40.0%
AATCTGCAACTCTTCTTGGA+AGG + chr1_2:77186885-77186904 None:intergenic 40.0%
TCCAAGAAGAGTTGCAGATT+TGG - chr1_2:77186885-77186904 Msa0094100:CDS 40.0%
ACCAAATCTGCAACTCTTCT+TGG + chr1_2:77186889-77186908 None:intergenic 40.0%
! CTATGTATTTCTGCTTCCAG+TGG + chr1_2:77187108-77187127 None:intergenic 40.0%
AGGGAATGTTTCCGAAAGAT+GGG - chr1_2:77187360-77187379 Msa0094100:CDS 40.0%
ACCACTTAGTTACAATGTGG+AGG - chr1_2:77187626-77187645 Msa0094100:intron 40.0%
CCACTTAGTTACAATGTGGA+GGG - chr1_2:77187627-77187646 Msa0094100:intron 40.0%
GAGGCGATCCTACAATAATA+AGG - chr1_2:77187930-77187949 Msa0094100:CDS 40.0%
AAGTTATACTTGCTCCGTTG+TGG + chr1_2:77188053-77188072 None:intergenic 40.0%
! TACATCAGCATTGGAAACAC+AGG - chr1_2:77188272-77188291 Msa0094100:intron 40.0%
! ACATCAGCATTGGAAACACA+GGG - chr1_2:77188273-77188292 Msa0094100:intron 40.0%
!! CAATTTTTGGAGAGAGAGAG+CGG - chr1_2:77188352-77188371 Msa0094100:intron 40.0%
ACCGCGGAAAAAACTATAGT+CGG - chr1_2:77188428-77188447 Msa0094100:intron 40.0%
TCTCTTGAAATGCAGCGAAT+TGG - chr1_2:77188505-77188524 Msa0094100:intron 40.0%
!!! GCAGGCAAATCAGTTTTGAA+TGG + chr1_2:77188636-77188655 None:intergenic 40.0%
! CTCTGATTTGAAGCTGAAAC+TGG - chr1_2:77188705-77188724 Msa0094100:intron 40.0%
ACCTGTGAAAAAACCTAGGA+CGG + chr1_2:77188809-77188828 None:intergenic 40.0%
GACGATGGGTGATAACTATA+AGG + chr1_2:77188882-77188901 None:intergenic 40.0%
! AGCTTCCTTTCTGTTCTGAA+GGG + chr1_2:77189147-77189166 None:intergenic 40.0%
TAAGAGTGGAGCAATTGAAG+TGG - chr1_2:77189651-77189670 Msa0094100:CDS 40.0%
AAGAGTGGAGCAATTGAAGT+GGG - chr1_2:77189652-77189671 Msa0094100:CDS 40.0%
!! CTTAATCCATGGAGGTGTTG+GGG + chr1_2:77184024-77184043 None:intergenic 45.0%
!! CCTTAATCCATGGAGGTGTT+GGG + chr1_2:77184025-77184044 None:intergenic 45.0%
AGAAGAGGAGCCTTAATCCA+TGG + chr1_2:77184035-77184054 None:intergenic 45.0%
!! AATTGAGAAGTTGGTGGGGT+TGG + chr1_2:77184061-77184080 None:intergenic 45.0%
CGTTGGAATTGAGAAGTTGG+TGG + chr1_2:77184067-77184086 None:intergenic 45.0%
TGGGTCAAGGTTAAGAAAGC+TGG - chr1_2:77184419-77184438 Msa0094100:three_prime_UTR 45.0%
GCAGATGGCCCAACATATTT+CGG - chr1_2:77184689-77184708 Msa0094100:intron 45.0%
TGGCCCAACATATTTCGGAT+AGG - chr1_2:77184694-77184713 Msa0094100:intron 45.0%
TCCCCACATTAGATGAGTGA+TGG + chr1_2:77184825-77184844 None:intergenic 45.0%
GCATTAAATGGGATATGGGC+TGG - chr1_2:77185146-77185165 Msa0094100:intron 45.0%
TTCGTTGGACTATCCGCTAT+CGG - chr1_2:77185243-77185262 Msa0094100:CDS 45.0%
! CATAAGGAGCATGACCAAAG+TGG + chr1_2:77185270-77185289 None:intergenic 45.0%
TGTGAATAGACGAAGACTGG+AGG - chr1_2:77185427-77185446 Msa0094100:CDS 45.0%
GAGTAAGAAGGATGCTCTTG+TGG - chr1_2:77185462-77185481 Msa0094100:CDS 45.0%
CCACCAAAGGTGATCTTTAC+CGG - chr1_2:77185596-77185615 Msa0094100:intron 45.0%
CACCAAAGGTGATCTTTACC+GGG - chr1_2:77185597-77185616 Msa0094100:intron 45.0%
!! CCGGTTGGTAGTTCATATCA+TGG + chr1_2:77185696-77185715 None:intergenic 45.0%
TCATACAATGATCCGTTGGC+CGG + chr1_2:77185715-77185734 None:intergenic 45.0%
CCTCTCATACAATGATCCGT+TGG + chr1_2:77185719-77185738 None:intergenic 45.0%
CCAACGGATCATTGTATGAG+AGG - chr1_2:77185716-77185735 Msa0094100:intron 45.0%
TAGGACCTCGCTTCATTGAT+TGG - chr1_2:77185764-77185783 Msa0094100:intron 45.0%
ATCCACCAATCAATGAAGCG+AGG + chr1_2:77185772-77185791 None:intergenic 45.0%
GGAAGTAAGTCAGCATCTAC+CGG + chr1_2:77185808-77185827 None:intergenic 45.0%
!! TGCTGACTTACTTCCAGAAG+TGG - chr1_2:77185813-77185832 Msa0094100:intron 45.0%
TTACTTCCAGAAGTGGTTCC+TGG - chr1_2:77185820-77185839 Msa0094100:intron 45.0%
TCAAATCCAGGAACCACTTC+TGG + chr1_2:77185829-77185848 None:intergenic 45.0%
TGAGGTGGACAAATCCTAAG+TGG + chr1_2:77185856-77185875 None:intergenic 45.0%
! AGTTTTGCACTAGCATGAGG+TGG + chr1_2:77185871-77185890 None:intergenic 45.0%
GCTAGTGCAAAACTAACGGA+TGG - chr1_2:77185877-77185896 Msa0094100:intron 45.0%
GAAGAACTGCATCAAGAAGG+AGG + chr1_2:77185966-77185985 None:intergenic 45.0%
GGAAGAAACAGAGGACTTCA+AGG - chr1_2:77186327-77186346 Msa0094100:CDS 45.0%
CAGCTGCTATCTTAAAGCTG+TGG - chr1_2:77186355-77186374 Msa0094100:CDS 45.0%
GAGACTTGCCTTCAGTTCAT+TGG + chr1_2:77186448-77186467 None:intergenic 45.0%
GACTACTACACCCTAAGTCT+AGG + chr1_2:77186512-77186531 None:intergenic 45.0%
! GAGTTGCAGATTTGGTAGAG+AGG - chr1_2:77186893-77186912 Msa0094100:intron 45.0%
TTTGGTAGAGAGGAGAGAGT+TGG - chr1_2:77186903-77186922 Msa0094100:intron 45.0%
AACTTGACGAAGAAGTTGCG+CGG - chr1_2:77186941-77186960 Msa0094100:intron 45.0%
GATGAATTTCCACTGCCACA+AGG - chr1_2:77186994-77187013 Msa0094100:intron 45.0%
AATGCTGCATGGAAACCTTG+TGG - chr1_2:77187300-77187319 Msa0094100:CDS 45.0%
ATGCTGCATGGAAACCTTGT+GGG - chr1_2:77187301-77187320 Msa0094100:CDS 45.0%
GAGGGAATGTTTCCGAAAGA+TGG - chr1_2:77187359-77187378 Msa0094100:CDS 45.0%
CCCTCCACATTGTAACTAAG+TGG + chr1_2:77187630-77187649 None:intergenic 45.0%
! CAATGTGGAGGGTGTAAATC+CGG - chr1_2:77187638-77187657 Msa0094100:intron 45.0%
! AATGTGGAGGGTGTAAATCC+GGG - chr1_2:77187639-77187658 Msa0094100:intron 45.0%
TTTAATCAGGCATGTCCCTC+TGG + chr1_2:77187855-77187874 None:intergenic 45.0%
AGGCAAAGGTTTCTCGAAAG+CGG + chr1_2:77187988-77188007 None:intergenic 45.0%
CTACATTCAACAACGAGTGC+AGG - chr1_2:77188214-77188233 Msa0094100:CDS 45.0%
ATTCAACAACGAGTGCAGGA+AGG - chr1_2:77188218-77188237 Msa0094100:CDS 45.0%
! AGGAGTTTTCGACGGTGTAT+TGG - chr1_2:77188243-77188262 Msa0094100:CDS 45.0%
! GTTTTCGACGGTGTATTGGA+AGG - chr1_2:77188247-77188266 Msa0094100:CDS 45.0%
TGGAAGGACTACATCAGCAT+TGG - chr1_2:77188263-77188282 Msa0094100:CDS 45.0%
GAAACACAGGGAAGTAGCAA+AGG - chr1_2:77188285-77188304 Msa0094100:intron 45.0%
CGATGCAGAGACTAATCAGT+CGG - chr1_2:77188314-77188333 Msa0094100:intron 45.0%
GATGCAGAGACTAATCAGTC+GGG - chr1_2:77188315-77188334 Msa0094100:intron 45.0%
!!! GCCGACTATAGTTTTTTCCG+CGG + chr1_2:77188432-77188451 None:intergenic 45.0%
TCAATGACTGCAACAACAGC+AGG + chr1_2:77188654-77188673 None:intergenic 45.0%
! ATCTTGAAGCCCACGTTTTC+TGG + chr1_2:77189072-77189091 None:intergenic 45.0%
GGAAACCCTTCAGAACAGAA+AGG - chr1_2:77189139-77189158 Msa0094100:intron 45.0%
CAGCTTCCTTTCTGTTCTGA+AGG + chr1_2:77189148-77189167 None:intergenic 45.0%
! AGGCATTTTCTGCTGCTGTT+TGG - chr1_2:77189514-77189533 Msa0094100:CDS 45.0%
AGAGTGGAGCAATTGAAGTG+GGG - chr1_2:77189653-77189672 Msa0094100:CDS 45.0%
TCAAATCCCCAACACCTCCA+TGG - chr1_2:77184015-77184034 Msa0094100:three_prime_UTR 50.0%
! CCCAACACCTCCATGGATTA+AGG - chr1_2:77184022-77184041 Msa0094100:three_prime_UTR 50.0%
! GCCTTAATCCATGGAGGTGT+TGG + chr1_2:77184026-77184045 None:intergenic 50.0%
AGAGGAGCCTTAATCCATGG+AGG + chr1_2:77184032-77184051 None:intergenic 50.0%
ACCTTCTCATCTCTCTCCCA+TGG + chr1_2:77184293-77184312 None:intergenic 50.0%
GCTTCAAAGGTTGAGGAGTG+AGG - chr1_2:77184379-77184398 Msa0094100:intron 50.0%
GGAGTGAGGCTGCAATAATG+AGG - chr1_2:77184393-77184412 Msa0094100:intron 50.0%
GAGGACTAATGAGCTTGCCA+TGG - chr1_2:77184481-77184500 Msa0094100:three_prime_UTR 50.0%
AGGGGAAAGCTGATAGCAGA+TGG - chr1_2:77184674-77184693 Msa0094100:intron 50.0%
GCGGATAGTCCAACGAATCT+TGG + chr1_2:77185240-77185259 None:intergenic 50.0%
TCGTTGGACTATCCGCTATC+GGG - chr1_2:77185244-77185263 Msa0094100:CDS 50.0%
ATAGACGAAGACTGGAGGCT+TGG - chr1_2:77185432-77185451 Msa0094100:CDS 50.0%
! AGACTGGAGGCTTGGTTGTA+TGG - chr1_2:77185440-77185459 Msa0094100:CDS 50.0%
CCGGTAAAGATCACCTTTGG+TGG + chr1_2:77185599-77185618 None:intergenic 50.0%
AGCCCGGTAAAGATCACCTT+TGG + chr1_2:77185602-77185621 None:intergenic 50.0%
TAGCTCACTTGTCCTTCGGT+CGG + chr1_2:77185629-77185648 None:intergenic 50.0%
TCGGTAGCTCACTTGTCCTT+CGG + chr1_2:77185633-77185652 None:intergenic 50.0%
ATGAACTACCAACCGGCCAA+CGG - chr1_2:77185700-77185719 Msa0094100:intron 50.0%
! GACCTCGCTTCATTGATTGG+TGG - chr1_2:77185767-77185786 Msa0094100:intron 50.0%
AAGTCAGCATCTACCGGAAG+CGG + chr1_2:77185802-77185821 None:intergenic 50.0%
CTAAGTGGTGGCTCAAATCC+AGG + chr1_2:77185841-77185860 None:intergenic 50.0%
CTGGATTTGAGCCACCACTT+AGG - chr1_2:77185839-77185858 Msa0094100:intron 50.0%
GGTGGACAAATCCTAAGTGG+TGG + chr1_2:77185853-77185872 None:intergenic 50.0%
!! CAAGAAGGAGGGTACTACCA+AGG + chr1_2:77185954-77185973 None:intergenic 50.0%
CCGCAACAATAGAACACCTC+CGG + chr1_2:77186824-77186843 None:intergenic 50.0%
!! CCGGAGGTGTTCTATTGTTG+CGG - chr1_2:77186821-77186840 Msa0094100:CDS 50.0%
CCACTTGTACTAGTGCCTTG+TGG + chr1_2:77187012-77187031 None:intergenic 50.0%
! CCACAAGGCACTAGTACAAG+TGG - chr1_2:77187009-77187028 Msa0094100:intron 50.0%
TGCTGCATGGAAACCTTGTG+GGG - chr1_2:77187302-77187321 Msa0094100:CDS 50.0%
AAGTCTACATCCTCCCCACA+AGG + chr1_2:77187318-77187337 None:intergenic 50.0%
TTGTGGGGAGGATGTAGACT+TGG - chr1_2:77187317-77187336 Msa0094100:CDS 50.0%
!! TTTTTGGAGAGAGAGAGCGG+AGG - chr1_2:77188355-77188374 Msa0094100:intron 50.0%
! CCTGCGCAGTGCTTTTCTTT+TGG + chr1_2:77188485-77188504 None:intergenic 50.0%
!! CCAAAAGAAAAGCACTGCGC+AGG - chr1_2:77188482-77188501 Msa0094100:intron 50.0%
TCCAAAATAGCTGCCGTCCT+AGG - chr1_2:77188793-77188812 Msa0094100:intron 50.0%
! ACCTAGGACGGCAGCTATTT+TGG + chr1_2:77188797-77188816 None:intergenic 50.0%
!!! GCCGTCCTAGGTTTTTTCAC+AGG - chr1_2:77188805-77188824 Msa0094100:intron 50.0%
GTGGGGTTTCACTTTCAGAG+TGG - chr1_2:77189670-77189689 Msa0094100:CDS 50.0%
TGGTGGGGTTGGAGAAGAAG+AGG + chr1_2:77184050-77184069 None:intergenic 55.0%
GCCATGGGAGAGAGATGAGA+AGG - chr1_2:77184289-77184308 Msa0094100:intron 55.0%
TATCCGCTATCGGGCCACTT+TGG - chr1_2:77185253-77185272 Msa0094100:CDS 55.0%
TGACCAAAGTGGCCCGATAG+CGG + chr1_2:77185259-77185278 None:intergenic 55.0%
ACAATGATCCGTTGGCCGGT+TGG + chr1_2:77185711-77185730 None:intergenic 55.0%
GTGGATGCACAAACCGCTTC+CGG - chr1_2:77185786-77185805 Msa0094100:intron 55.0%
! CATAGACTGCGCCGCTCTTT+TGG - chr1_2:77186711-77186730 Msa0094100:CDS 55.0%
ACAATACAGCGTCTCACCGG+AGG - chr1_2:77186805-77186824 Msa0094100:CDS 55.0%
GTACTAGTGCCTTGTGGCAG+TGG + chr1_2:77187006-77187025 None:intergenic 55.0%
TGCATGGAAACCTTGTGGGG+AGG - chr1_2:77187305-77187324 Msa0094100:CDS 55.0%
TTTCTCGAAAGCGGCACTGC+GGG + chr1_2:77187979-77187998 None:intergenic 55.0%
GTTTCTCGAAAGCGGCACTG+CGG + chr1_2:77187980-77187999 None:intergenic 55.0%
! GGAAGGCGAGGAGTTTTCGA+CGG - chr1_2:77188235-77188254 Msa0094100:CDS 55.0%
GGGGTGAAGTTGGCCACCAA+AGG - chr1_2:77185583-77185602 Msa0094100:intron 60.0%
TCCTTCGGTCGGATTCAGCC+CGG + chr1_2:77185618-77185637 None:intergenic 60.0%
GGACAAGTGAGCTACCGAGC+TGG - chr1_2:77185635-77185654 Msa0094100:intron 60.0%
ACAACGAGTGCAGGAAGGCG+AGG - chr1_2:77188223-77188242 Msa0094100:CDS 60.0%
ACCGGGCTGAATCCGACCGA+AGG - chr1_2:77185614-77185633 Msa0094100:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 77183834 77189890 77183834 ID=Msa0094100;Name=Msa0094100
chr1_2 mRNA 77183834 77189890 77183834 ID=Msa0094100-mRNA-1;Parent=Msa0094100;Name=Msa0094100-mRNA-1;_AED=0.08;_eAED=0.08;_QI=36|0.87|0.88|1|0.87|0.77|9|515|763
chr1_2 exon 77183834 77184220 77183834 ID=Msa0094100-mRNA-1:exon:27366;Parent=Msa0094100-mRNA-1
chr1_2 exon 77184412 77184584 77184412 ID=Msa0094100-mRNA-1:exon:27365;Parent=Msa0094100-mRNA-1
chr1_2 exon 77184998 77185057 77184998 ID=Msa0094100-mRNA-1:exon:27364;Parent=Msa0094100-mRNA-1
chr1_2 exon 77185196 77185488 77185196 ID=Msa0094100-mRNA-1:exon:27363;Parent=Msa0094100-mRNA-1
chr1_2 exon 77186313 77186469 77186313 ID=Msa0094100-mRNA-1:exon:27362;Parent=Msa0094100-mRNA-1
chr1_2 exon 77186554 77186910 77186554 ID=Msa0094100-mRNA-1:exon:27361;Parent=Msa0094100-mRNA-1
chr1_2 exon 77187227 77187396 77187227 ID=Msa0094100-mRNA-1:exon:27360;Parent=Msa0094100-mRNA-1
chr1_2 exon 77187769 77188288 77187769 ID=Msa0094100-mRNA-1:exon:27359;Parent=Msa0094100-mRNA-1
chr1_2 exon 77189165 77189890 77189165 ID=Msa0094100-mRNA-1:exon:27358;Parent=Msa0094100-mRNA-1
chr1_2 five_prime_UTR 77189855 77189890 77189855 ID=Msa0094100-mRNA-1:five_prime_utr;Parent=Msa0094100-mRNA-1
chr1_2 CDS 77189165 77189854 77189165 ID=Msa0094100-mRNA-1:cds;Parent=Msa0094100-mRNA-1
chr1_2 CDS 77187769 77188288 77187769 ID=Msa0094100-mRNA-1:cds;Parent=Msa0094100-mRNA-1
chr1_2 CDS 77187227 77187396 77187227 ID=Msa0094100-mRNA-1:cds;Parent=Msa0094100-mRNA-1
chr1_2 CDS 77186554 77186910 77186554 ID=Msa0094100-mRNA-1:cds;Parent=Msa0094100-mRNA-1
chr1_2 CDS 77186313 77186469 77186313 ID=Msa0094100-mRNA-1:cds;Parent=Msa0094100-mRNA-1
chr1_2 CDS 77185196 77185488 77185196 ID=Msa0094100-mRNA-1:cds;Parent=Msa0094100-mRNA-1
chr1_2 CDS 77184998 77185057 77184998 ID=Msa0094100-mRNA-1:cds;Parent=Msa0094100-mRNA-1
chr1_2 CDS 77184540 77184584 77184540 ID=Msa0094100-mRNA-1:cds;Parent=Msa0094100-mRNA-1
chr1_2 three_prime_UTR 77184412 77184539 77184412 ID=Msa0094100-mRNA-1:three_prime_utr;Parent=Msa0094100-mRNA-1
chr1_2 three_prime_UTR 77183834 77184220 77183834 ID=Msa0094100-mRNA-1:three_prime_utr;Parent=Msa0094100-mRNA-1
Gene Sequence

>Msa0094100

ATGCTCTTCCTTAACTATTCATGTTCTGTCATTCACATTTCTTCTTCTTCTTCTTCTTCAAACAACAACAACAACCACCTTAATCACAACAAACCCAATTCCCTTTCAATTCCTAACAACGATGATGATAATGTTTCTGTCAAATTCAAATCCCCAACACCTCCATGGATTAAGGCTCCTCTTCTTCTCCAACCCCACCAACTTCTCAATTCCAACGTTGAACCTAAACAACGTGACCATTCTGATAAAGCTTTAACCGGTAAAGAACTCAGAGGCAAAAAAGCCTTAAAGAAAATAGCCCACAAACTTGAAAGCCTTCACAAGACTCAAACTCAAATGGGTTCTCAAAAAGTTGAAAACTTTGGGTCTAGTTTGGAAAATTTGATGGAGAATGAGAAGGTTGTGAGAAAAGAAAGAATGCCATGGGAGAGAGATGAGAAGGTTAATCTTTTGAAGGTGAAAAAGGAAAAAATTGTCACTGCTGCGGATTTGACTCTTGATAAGATGTTGCTTCAAAGGTTGAGGAGTGAGGCTGCAATAATGAGGATTTGGGTCAAGGTTAAGAAAGCTGGTGTTACACAAGATGTTGTGAATCAAATTAAAAGGACTTGGAGGACTAATGAGCTTGCCATGGTTAAATTTGATATCCCTTTATGTCAAAATATGGATAGAGCAAGAGAAATTGTTGAGACGAAGACTGGAGGCTTGGTTGTATGGAGTAAGAAGGATGCTCTTGTGGTTTATAGAGGATGCACCTATAAGTTGACCTCTAAAGGTTCTACGAAGATTGATACCGGTTATATTCCTAGTCGAAAAACAAATTCTTATGAAATGAATGGGGTGAAGTTGGCCACCAAAGGTGATCTTTACCGGGCTGAATCCGACCGAAGGACAAGTGAGCTACCGAGCTGGAATGCTGATCATAAGCATTCTCTATCAACTGACATCCATGATATGAACTACCAACCGGCCAACGGATCATTGTATGAGAGGGAATGTGATAGATTATTGGATGGTTTAGGACCTCGCTTCATTGATTGGTGGATGCACAAACCGCTTCCGGTAGATGCTGACTTACTTCCAGAAGTGGTTCCTGGATTTGAGCCACCACTTAGGATTTGTCCACCTCATGCTAGTGCAAAACTAACGGATGGTGAACTAACATACTTCAGGAGGATTTCTCACCCTTTACCAACTCATTTTGTCCTTGGAAGAAACAGAGGACTTCAAGGCTTAGCAGCTGCTATCTTAAAGCTGTGGCACAAGAGTCATATAGCAAAAATTGCAATCAAGTATGGAGTTCAAAATACTGACAATGAAACAATGGCCAATGAACTGAAGGCAAGTCTCATTGAAAATTTACTTTTCATTGTGGGTGAGCGTCTCACCGGAGGTGTTCTATTGTTGCGGAACAAGTTTTACATACTACTATATAGGGGAAATGATTTCCTTCCAAGAAGAGTTGCAGATTTGGTAGAGAGGAGAGAGTTGGAGCTTAAAAGTTGTCAACTTGACGAAGAAGTTGCGCGGATGAAAGCAATTCATGCATTTTCTTCTATTGATGAATTTCCACTGCCACAAGGCACTAGTACAAGTGGAACTTTAACAGAATTTAGGAACATCCAAAATAAGCTTGACGAAATGAAAGAAGTCAATGTAGATTTAAGCATTCCACTGGAAGCAGAAATACATAGATTGGAAAAGGAATTGAAAGAGCAACAGCGTAAAGCTTTCATTCTTAACAAGAAAATAGAGAGATCAACAATGGAATTATCAAAGTTAAATGCTGCATGGAAACCTTGTGGGGAGGATGTAGACTTGGAAATAATGACAGATGAGGAGAGGGAATGTTTCCGAAAGATGGGATTGAAGATGAGAAGTTGTCTAGTTCTTGGAAGGCGAGGAGTTTTCGACGGTGTATTGGAAGGACTACATCAGCATTGGAAACACAGGGAAGTAGCAAAGGTCATTACGATGCAGAGACTAATCAGTCGGGTCATCTACACTTCACAATTTTTGGAGAGAGAGAGCGGAGGAATTTTAGTTTCAGTTGATCAACTAAAAGAGGGATATGCTATTATTATTTACCGCGGAAAAAACTATAGTCGGCCGTCAGAAAAGATAGCGAAAAACCTTCTAACCAAAAGAAAAGCACTGCGCAGGTCTCTTGAAATGCAGCGAATTGGATCATTGAAGTTTTTTGCTCATCAGAGAGAGAAGACAATCTCTGATTTGAAGCTGAAACTGGAAACCCTTCAGAACAGAAAGGAAGCTGAGACCAGACAATATTAA

Protein sequence

>Msa0094100

MLFLNYSCSVIHISSSSSSSNNNNNHLNHNKPNSLSIPNNDDDNVSVKFKSPTPPWIKAPLLLQPHQLLNSNVEPKQRDHSDKALTGKELRGKKALKKIAHKLESLHKTQTQMGSQKVENFGSSLENLMENEKVVRKERMPWERDEKVNLLKVKKEKIVTAADLTLDKMLLQRLRSEAAIMRIWVKVKKAGVTQDVVNQIKRTWRTNELAMVKFDIPLCQNMDRAREIVETKTGGLVVWSKKDALVVYRGCTYKLTSKGSTKIDTGYIPSRKTNSYEMNGVKLATKGDLYRAESDRRTSELPSWNADHKHSLSTDIHDMNYQPANGSLYERECDRLLDGLGPRFIDWWMHKPLPVDADLLPEVVPGFEPPLRICPPHASAKLTDGELTYFRRISHPLPTHFVLGRNRGLQGLAAAILKLWHKSHIAKIAIKYGVQNTDNETMANELKASLIENLLFIVGERLTGGVLLLRNKFYILLYRGNDFLPRRVADLVERRELELKSCQLDEEVARMKAIHAFSSIDEFPLPQGTSTSGTLTEFRNIQNKLDEMKEVNVDLSIPLEAEIHRLEKELKEQQRKAFILNKKIERSTMELSKLNAAWKPCGEDVDLEIMTDEERECFRKMGLKMRSCLVLGRRGVFDGVLEGLHQHWKHREVAKVITMQRLISRVIYTSQFLERESGGILVSVDQLKEGYAIIIYRGKNYSRPSEKIAKNLLTKRKALRRSLEMQRIGSLKFFAHQREKTISDLKLKLETLQNRKEAETRQY*