AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0269360


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0269360 MtrunA17_Chr4g0076721 83.918 342 25 7 3 329 8 334 0.0 512
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0269360 AT2G02410.3 71.318 258 66 4 72 329 10 259 1.92e-131 375
Msa0269360 AT2G02410.1 71.318 258 66 4 72 329 58 307 7.10e-131 375
Msa0269360 AT2G02410.6 61.639 305 81 5 53 329 39 335 6.37e-125 362
Msa0269360 AT2G02410.2 71.008 238 61 4 92 329 13 242 1.44e-118 342
Msa0269360 AT2G02410.5 73.128 227 53 4 103 329 3 221 5.74e-116 334
Msa0269360 AT2G02410.13 73.128 227 53 4 103 329 3 221 5.74e-116 334
Msa0269360 AT2G02410.12 69.231 195 52 4 72 266 10 196 5.16e-92 273
Msa0269360 AT2G02410.11 64.953 214 67 4 53 266 39 244 9.35e-92 275
Msa0269360 AT2G02410.8 64.953 214 67 4 53 266 39 244 9.35e-92 275
Msa0269360 AT2G02410.9 65.868 167 49 4 72 238 10 168 9.55e-71 218
Msa0269360 AT2G02410.7 65.476 168 50 4 72 239 58 217 1.54e-70 219
Msa0269360 AT2G02410.10 65.476 168 50 4 72 239 58 217 1.54e-70 219
Msa0269360 AT2G02410.4 56.410 195 49 5 72 238 58 244 1.75e-64 205

Find 79 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTAGGTTTCAGCTTTAA+AGG 0.156682 2_3:+94019 Msa0269360:intron
CTTCTTATTGTAATTGTAAT+TGG 0.157438 2_3:-93199 None:intergenic
ATTCTTCTTGCTGCTGCTTT+TGG 0.158995 2_3:-93262 None:intergenic
ATTGTAATTGTAATTGGAAT+TGG 0.301174 2_3:-93193 None:intergenic
AGGATGGTTGCCCCAAAGTC+TGG 0.335763 2_3:+94042 Msa0269360:CDS
TTGGCGTTAGAAGTGATTCT+AGG 0.343874 2_3:-93342 None:intergenic
GGAAGAATATTCCTTGTGAT+TGG 0.354869 2_3:-93839 None:intergenic
AGTTATCAGCCATGATGTTA+AGG 0.355990 2_3:-98869 None:intergenic
ACACAAATCAGCTGGGTCTT+GGG 0.361413 2_3:+93611 Msa0269360:CDS
TAACCATCAACAAGCAAAAC+AGG 0.364806 2_3:-93661 None:intergenic
GTTACAATGTCTGTGGATAT+TGG 0.373030 2_3:+93680 Msa0269360:CDS
TTTACGTGTTTACAATATCT+TGG 0.376596 2_3:-98954 None:intergenic
GAAGAATATTCCTTGTGATT+GGG 0.378710 2_3:-93838 None:intergenic
AACGAACAAGATGATGATAA+TGG 0.382465 2_3:-93144 None:intergenic
GTTATCAGCCATGATGTTAA+GGG 0.389151 2_3:-98868 None:intergenic
TAAGTTCGTCAATAAGCTTC+TGG 0.389972 2_3:-93750 None:intergenic
TGATTTGAATGAATTTAGTT+AGG 0.391080 2_3:+93060 Msa0269360:five_prime_UTR
GAAGTGATTCTAGGAGGAGT+TGG 0.391837 2_3:-93333 None:intergenic
GTATTTGATGCCATGATGTC+TGG 0.393030 2_3:+93811 Msa0269360:CDS
TAGATGAGGAAGAGGGATGA+TGG 0.396830 2_3:+93083 Msa0269360:five_prime_UTR
ATTCTAGGAGGAGTTGGAGT+TGG 0.400020 2_3:-93327 None:intergenic
CGGTAACTAGTTGAAGGTCT+TGG 0.402341 2_3:-93508 None:intergenic
GGAGGAGTTGGAGTTGGAGT+TGG 0.403011 2_3:-93321 None:intergenic
ACCTTCGCTTCCTCAAGATA+TGG 0.413759 2_3:+93370 Msa0269360:CDS
AGAAGTGACGACCCAGACTT+TGG 0.415939 2_3:-94054 None:intergenic
GAAGTGACGACCCAGACTTT+GGG 0.421042 2_3:-94053 None:intergenic
TACACAAATCAGCTGGGTCT+TGG 0.424310 2_3:+93610 Msa0269360:CDS
AACTTTCGAGTTAATAATGA+AGG 0.436263 2_3:-98841 None:intergenic
GTGTAGTAGAGGGAGGTTGT+TGG 0.441657 2_3:-93592 None:intergenic
GAGGAAGCGAAGGTTCTGTT+TGG 0.441688 2_3:-93361 None:intergenic
TAGTTAGGTAGATGAGGAAG+AGG 0.450690 2_3:+93075 Msa0269360:five_prime_UTR
AGTTGAAGGTCTTGGAGTGC+TGG 0.452523 2_3:-93500 None:intergenic
CTGATGCATCTGCTGATACA+TGG 0.474850 2_3:+93884 Msa0269360:CDS
AAAGAAGAAGGCCGAGAAAG+AGG 0.474951 2_3:+93534 Msa0269360:CDS
AAGAATATTCCTTGTGATTG+GGG 0.489548 2_3:-93837 None:intergenic
CCTCTACTACACAAATCAGC+TGG 0.492718 2_3:+93603 Msa0269360:CDS
CACAAATCAGCTGGGTCTTG+GGG 0.493462 2_3:+93612 Msa0269360:CDS
ATCCGCAAGATCCTCTTTCT+CGG 0.497073 2_3:-93545 None:intergenic
TGTTTGGAGCAGCAAGGCAT+TGG 0.500774 2_3:+94348 Msa0269360:CDS
GATCACGATAGAGGTCAGTT+TGG 0.509125 2_3:-93570 None:intergenic
GTAGATCAAGGCATCACAAA+AGG 0.512172 2_3:+94621 Msa0269360:intron
AGTTAGGTAGATGAGGAAGA+GGG 0.514357 2_3:+93076 Msa0269360:five_prime_UTR
TGAATTTAGTTAGGTAGATG+AGG 0.514465 2_3:+93069 Msa0269360:five_prime_UTR
CAATCTACCTTGAAAAGAAG+TGG 0.518431 2_3:-98635 None:intergenic
AATCACAAGGAATATTCTTC+CGG 0.528595 2_3:+93841 Msa0269360:CDS
CCAGCTGATTTGTGTAGTAG+AGG 0.530779 2_3:-93603 None:intergenic
TGAGAAAACAATGTCGATGC+CGG 0.535047 2_3:-93860 None:intergenic
GTTTCAGCTTTAAAGGAGGA+TGG 0.538423 2_3:+94026 Msa0269360:CDS
CACCTTTAGTATGCTTAGAG+AGG 0.540405 2_3:+93774 Msa0269360:CDS
CAATCTTGATGCAGAAGTAG+TGG 0.544356 2_3:+98666 Msa0269360:CDS
AGGTTGTTGGATCACGATAG+AGG 0.546658 2_3:-93579 None:intergenic
GGATGGTTGCCCCAAAGTCT+GGG 0.556380 2_3:+94043 Msa0269360:CDS
TGCCTTGCTGCTCCAAACAA+AGG 0.558029 2_3:-94344 None:intergenic
GACCTCTCTAAGCATACTAA+AGG 0.559341 2_3:-93776 None:intergenic
ATGAGGAAGAGGGATGATGG+AGG 0.562071 2_3:+93086 Msa0269360:five_prime_UTR
ATTGGGGAATCCAGACATCA+TGG 0.573403 2_3:-93821 None:intergenic
CTCTACTACACAAATCAGCT+GGG 0.575051 2_3:+93604 Msa0269360:CDS
AGTTGAAACCCTTAACATCA+TGG 0.578393 2_3:+98860 Msa0269360:three_prime_UTR
GGCCGAGAAAGAGGATCTTG+CGG 0.579972 2_3:+93543 Msa0269360:CDS
GGCCTTTGTTTGGAGCAGCA+AGG 0.582037 2_3:+94342 Msa0269360:CDS
CAGCTGATTTGTGTAGTAGA+GGG 0.582819 2_3:-93602 None:intergenic
TCCATATCTTGAGGAAGCGA+AGG 0.583867 2_3:-93371 None:intergenic
AAGAGATGCTTCAAGAGCAA+AGG 0.590832 2_3:+94650 Msa0269360:CDS
AAGTGACGACCCAGACTTTG+GGG 0.593977 2_3:-94052 None:intergenic
TACCTACCTTCCATATCTTG+AGG 0.597905 2_3:-93380 None:intergenic
GAACTAATTGAATATGACAC+TGG 0.598924 2_3:+98916 Msa0269360:three_prime_UTR
ACAAATCAGCTGGGTCTTGG+GGG 0.604764 2_3:+93613 Msa0269360:CDS
AATGAAAGTACTAGTTCCGA+AGG 0.610735 2_3:+92989 None:intergenic
TGTCAACAACAAGCAGCACA+TGG 0.612468 2_3:+94083 Msa0269360:CDS
GTCTGGATTCCCCAATCACA+AGG 0.613410 2_3:+93828 Msa0269360:CDS
CTGATTTGTGTAGTAGAGGG+AGG 0.619033 2_3:-93599 None:intergenic
GTTGATGGTTACAATGTCTG+TGG 0.627615 2_3:+93673 Msa0269360:CDS
GCGTTAGAAGTGATTCTAGG+AGG 0.630133 2_3:-93339 None:intergenic
TCGCTTCCTCAAGATATGGA+AGG 0.635284 2_3:+93374 Msa0269360:CDS
TTAGGTTTCAGCTTTAAAGG+AGG 0.636930 2_3:+94022 Msa0269360:intron
GATCAAGGCATCACAAAAGG+AGG 0.644648 2_3:+94624 Msa0269360:intron
AACCATCAACAAGCAAAACA+GGG 0.648456 2_3:-93660 None:intergenic
TGGATGCTCTGAAGAACCTG+AGG 0.667302 2_3:+98686 Msa0269360:CDS
CAGCAAGGCATTGGTAACCG+AGG 0.676741 2_3:+94357 Msa0269360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATATTATTATTTATTT+AGG + chr2_3:93459-93478 Msa0269360:intron 0.0%
!!! TATTTTATTTTATTTTTGTG+TGG - chr2_3:93021-93040 None:intergenic 10.0%
!! TATGTTATATACAAATAGTT+GGG - chr2_3:95259-95278 None:intergenic 15.0%
!! ATATGTTATATACAAATAGT+TGG - chr2_3:95260-95279 None:intergenic 15.0%
!! ACTATTTGTATATAACATAT+TGG + chr2_3:95260-95279 Msa0269360:intron 15.0%
!! AACAAAGAAGTTAATAAATT+AGG - chr2_3:95698-95717 None:intergenic 15.0%
!! ATATAAAGAATGACAAAAAT+AGG - chr2_3:96553-96572 None:intergenic 15.0%
!!! TTTTTTTATCACTGTAATTA+AGG - chr2_3:97099-97118 None:intergenic 15.0%
!! AATTAGAAGATAAATGTATT+AGG + chr2_3:97428-97447 Msa0269360:intron 15.0%
!!! TTTCACAAAAAAAAATGTTT+TGG + chr2_3:97605-97624 Msa0269360:intron 15.0%
!!! AAAAAATGTTTTGGATATAT+TGG + chr2_3:97614-97633 Msa0269360:intron 15.0%
!!! AAACAACTTTTTTTATTACA+GGG + chr2_3:98496-98515 Msa0269360:intron 15.0%
!!! TTTTATTTTATTTTGCATGT+CGG + chr2_3:98814-98833 Msa0269360:three_prime_UTR 15.0%
!! TGATTTGAATGAATTTAGTT+AGG + chr2_3:93060-93079 Msa0269360:five_prime_UTR 20.0%
!! ATTGTAATTGTAATTGGAAT+TGG - chr2_3:93196-93215 None:intergenic 20.0%
!! CTTCTTATTGTAATTGTAAT+TGG - chr2_3:93202-93221 None:intergenic 20.0%
!! CATTTGAAAAAAAGAAGAAA+AGG - chr2_3:94254-94273 None:intergenic 20.0%
!!! TTGAATCTCAAATTTTTGAA+TGG + chr2_3:94432-94451 Msa0269360:intron 20.0%
!! AACAAAACGAATATATCTAA+TGG - chr2_3:94712-94731 None:intergenic 20.0%
!! AAAATCACAATAGATAAAAC+TGG - chr2_3:94837-94856 None:intergenic 20.0%
!!! TTCTATTTTCCTTTTCATTA+TGG - chr2_3:94958-94977 None:intergenic 20.0%
!!! TATTGGTAATAATCTAACTT+TGG + chr2_3:95277-95296 Msa0269360:intron 20.0%
!! TTTAATGACATATATGTTGT+TGG - chr2_3:95447-95466 None:intergenic 20.0%
!! CTCAAGAAAATCAAATTATA+AGG - chr2_3:95494-95513 None:intergenic 20.0%
!! GACTAAATTTGAATTTGTAA+AGG + chr2_3:95971-95990 Msa0269360:intron 20.0%
!! TAAATTTGAATTTGTAAAGG+TGG + chr2_3:95974-95993 Msa0269360:intron 20.0%
!!! TATTTTAGCTCTTTAATCTA+AGG + chr2_3:96492-96511 Msa0269360:intron 20.0%
!! TTAATGTATTTATGGTATGA+AGG + chr2_3:97004-97023 Msa0269360:intron 20.0%
!! GTGAATGTTATAGTTATTAT+AGG + chr2_3:97459-97478 Msa0269360:intron 20.0%
!! TTATTATAGGTAATGATATG+AGG + chr2_3:97472-97491 Msa0269360:intron 20.0%
!! TATTATAGGTAATGATATGA+GGG + chr2_3:97473-97492 Msa0269360:intron 20.0%
!!! TCATTTTTAAACCATAAACT+TGG + chr2_3:97526-97545 Msa0269360:intron 20.0%
!!! CATTTTTAAACCATAAACTT+GGG + chr2_3:97527-97546 Msa0269360:intron 20.0%
!!! ATTTTTAAACCATAAACTTG+GGG + chr2_3:97528-97547 Msa0269360:intron 20.0%
!! TGAATATTATGTTATAGCTA+TGG + chr2_3:98030-98049 Msa0269360:intron 20.0%
!! AAACAAAACTTAGAAGAATT+AGG - chr2_3:98168-98187 None:intergenic 20.0%
!!! AATTCTTCTAAGTTTTGTTT+TGG + chr2_3:98168-98187 Msa0269360:intron 20.0%
!!! TTTTATAGATGTCTTATAGT+TGG + chr2_3:98333-98352 Msa0269360:intron 20.0%
!! TTTATAGATGTCTTATAGTT+GGG + chr2_3:98334-98353 Msa0269360:intron 20.0%
!! CAAGATTTACAACTTAATAT+TGG - chr2_3:98379-98398 None:intergenic 20.0%
!!! CAAACAACTTTTTTTATTAC+AGG + chr2_3:98495-98514 Msa0269360:intron 20.0%
!!! ACATGTGAATATGTTTTAAT+AGG + chr2_3:98777-98796 Msa0269360:three_prime_UTR 20.0%
!!! ATTTTATTTTTGTGTGGTTC+TGG - chr2_3:93015-93034 None:intergenic 25.0%
!! CTCAAAAAACATTTTCTCAA+TGG + chr2_3:93709-93728 Msa0269360:CDS 25.0%
! TATTCTTTACTCCTCAATTT+AGG + chr2_3:94004-94023 Msa0269360:intron 25.0%
!! AATTTAGGTTTCAGCTTTAA+AGG + chr2_3:94019-94038 Msa0269360:intron 25.0%
!!! TTCTTCTTTTTTTCAAATGC+TGG + chr2_3:94255-94274 Msa0269360:intron 25.0%
! TGTAATTGAGATTTATACTC+TGG + chr2_3:94307-94326 Msa0269360:intron 25.0%
!! GTCATATTAATGTTTTACCT+CGG - chr2_3:94377-94396 None:intergenic 25.0%
!! TCCTTCAATGATATTTTACA+TGG + chr2_3:94574-94593 Msa0269360:intron 25.0%
! ACCATGTAAAATATCATTGA+AGG - chr2_3:94578-94597 None:intergenic 25.0%
!! TTTTATGATTTTTCGCTGTA+TGG + chr2_3:94739-94758 Msa0269360:intron 25.0%
! CTTAATGAGTATCTAACTAT+GGG + chr2_3:94876-94895 Msa0269360:intron 25.0%
! TTAATGAGTATCTAACTATG+GGG + chr2_3:94877-94896 Msa0269360:intron 25.0%
! TTAGAAACTTTCTCCTATTA+AGG + chr2_3:94984-95003 Msa0269360:intron 25.0%
! TAGAAACTTTCTCCTATTAA+GGG + chr2_3:94985-95004 Msa0269360:intron 25.0%
! CTACATAAATACAGAAACTA+AGG - chr2_3:95056-95075 None:intergenic 25.0%
!! TAAATTTTCCCATCTCAAAA+TGG + chr2_3:95130-95149 Msa0269360:intron 25.0%
! AATCAAATTATAAGGACACA+TGG - chr2_3:95486-95505 None:intergenic 25.0%
!! TAAAAATCTGGAACAGTTAA+AGG - chr2_3:95527-95546 None:intergenic 25.0%
! GGAAATCAAAAGTAAAAATC+TGG - chr2_3:95539-95558 None:intergenic 25.0%
! TTAATAAATTAGGATGACCA+AGG - chr2_3:95688-95707 None:intergenic 25.0%
! TATCGTTCATTCTGATATAT+AGG + chr2_3:95824-95843 Msa0269360:intron 25.0%
! ATCGTTCATTCTGATATATA+GGG + chr2_3:95825-95844 Msa0269360:intron 25.0%
!! CTATTTTGTAGTTCTTATTC+AGG - chr2_3:96296-96315 None:intergenic 25.0%
!! TAAAAAGTATATTGCTGGAT+TGG - chr2_3:96445-96464 None:intergenic 25.0%
!! ACATCTAAAAAGTATATTGC+TGG - chr2_3:96450-96469 None:intergenic 25.0%
! AGGTTTCTATTAATTGAAGA+AGG + chr2_3:96671-96690 Msa0269360:intron 25.0%
!!! TCCAAAAACTATTTTTCTTG+GGG - chr2_3:96931-96950 None:intergenic 25.0%
!!! CTCCAAAAACTATTTTTCTT+GGG - chr2_3:96932-96951 None:intergenic 25.0%
! GTTGGATGTTAATGTATTTA+TGG + chr2_3:96996-97015 Msa0269360:intron 25.0%
!!! GAGCTTTGAAATGATTTATT+TGG - chr2_3:97043-97062 None:intergenic 25.0%
! AATTTCACAAACAAAACTCA+AGG - chr2_3:97334-97353 None:intergenic 25.0%
! ATCTCTATGTATTCAACATT+GGG + chr2_3:97797-97816 Msa0269360:intron 25.0%
! GAAATAGATCACACATTAAT+AGG - chr2_3:97926-97945 None:intergenic 25.0%
! TTAATGTGTGATCTATTTCA+AGG + chr2_3:97927-97946 Msa0269360:intron 25.0%
!!! TCAAGGTATTGTACATTAAT+TGG + chr2_3:97944-97963 Msa0269360:intron 25.0%
!!! AGAAGCATAATGTAGTTTTT+TGG + chr2_3:97993-98012 Msa0269360:intron 25.0%
! AGTAACAGTTTCATTCATAT+AGG - chr2_3:98067-98086 None:intergenic 25.0%
! TATCACAAAAAATGTTCTCA+TGG + chr2_3:98248-98267 Msa0269360:intron 25.0%
! ATCACAAAAAATGTTCTCAT+GGG + chr2_3:98249-98268 Msa0269360:intron 25.0%
! TTATAGATGTCTTATAGTTG+GGG + chr2_3:98335-98354 Msa0269360:intron 25.0%
!! ATTAAGTTGTAAATCTTGTG+TGG + chr2_3:98381-98400 Msa0269360:intron 25.0%
!! TTAAGTTGTAAATCTTGTGT+GGG + chr2_3:98382-98401 Msa0269360:intron 25.0%
! TCATTTCATGTTATTGAGTT+AGG - chr2_3:98455-98474 None:intergenic 25.0%
! AACTCAATAACATGAAATGA+TGG + chr2_3:98455-98474 Msa0269360:intron 25.0%
! ACTCAATAACATGAAATGAT+GGG + chr2_3:98456-98475 Msa0269360:intron 25.0%
!!! AACTTTCGAGTTAATAATGA+AGG - chr2_3:98844-98863 None:intergenic 25.0%
! TTTACGTGTTTACAATATCT+TGG - chr2_3:98957-98976 None:intergenic 25.0%
TGAATTTAGTTAGGTAGATG+AGG + chr2_3:93069-93088 Msa0269360:five_prime_UTR 30.0%
AACGAACAAGATGATGATAA+TGG - chr2_3:93147-93166 None:intergenic 30.0%
! TTTTTACGGTAACTAGTTGA+AGG - chr2_3:93517-93536 None:intergenic 30.0%
TAGTTACCGTAAAAAGAAGA+AGG + chr2_3:93522-93541 Msa0269360:CDS 30.0%
AAGAATATTCCTTGTGATTG+GGG - chr2_3:93840-93859 None:intergenic 30.0%
GAAGAATATTCCTTGTGATT+GGG - chr2_3:93841-93860 None:intergenic 30.0%
AATCACAAGGAATATTCTTC+CGG + chr2_3:93841-93860 Msa0269360:CDS 30.0%
! TGATACATGGATTGAAAAAG+AGG + chr2_3:93897-93916 Msa0269360:CDS 30.0%
TAAAGCTGAAACCTAAATTG+AGG - chr2_3:94018-94037 None:intergenic 30.0%
GAGAGAACAATAGTTATGAT+TGG - chr2_3:94174-94193 None:intergenic 30.0%
! TTTATACTCTGGATGTTTTC+AGG + chr2_3:94318-94337 Msa0269360:intron 30.0%
! TTATACTCTGGATGTTTTCA+GGG + chr2_3:94319-94338 Msa0269360:intron 30.0%
TGTCACACTAATCAAAGATT+TGG - chr2_3:94525-94544 None:intergenic 30.0%
GTGACAAATTGACAATCATT+TGG + chr2_3:94539-94558 Msa0269360:intron 30.0%
!! GGTCTTGTTTATTACTTGTT+TGG + chr2_3:94595-94614 Msa0269360:intron 30.0%
CCATAGTTAGATACTCATTA+AGG - chr2_3:94878-94897 None:intergenic 30.0%
CCTTAATGAGTATCTAACTA+TGG + chr2_3:94875-94894 Msa0269360:intron 30.0%
CTTGCATTGTAATTCTTGAT+GGG + chr2_3:94913-94932 Msa0269360:intron 30.0%
AAAGTTCTGCCATAATGAAA+AGG + chr2_3:94946-94965 Msa0269360:intron 30.0%
AGATTATATCCTCCCTTAAT+AGG - chr2_3:95000-95019 None:intergenic 30.0%
ATACAAATAGTTGGGATTGT+CGG - chr2_3:95251-95270 None:intergenic 30.0%
AGAGAAAAAAGACAAGTGAT+TGG - chr2_3:95341-95360 None:intergenic 30.0%
TACTTTGTGATACTTTCTGA+TGG + chr2_3:95384-95403 Msa0269360:intron 30.0%
!!! TTTTGATTTCCTTACTATCC+TGG + chr2_3:95548-95567 Msa0269360:intron 30.0%
TAGTGAATGTTAAAGACCAT+TGG + chr2_3:95572-95591 Msa0269360:intron 30.0%
TGAATTTGGCTAGAAAATGA+AGG - chr2_3:95780-95799 None:intergenic 30.0%
TCAGTCATTAAGACGAATAA+GGG - chr2_3:95892-95911 None:intergenic 30.0%
ATCAGTCATTAAGACGAATA+AGG - chr2_3:95893-95912 None:intergenic 30.0%
! TTGTGATTTTCCATTGTTGT+TGG - chr2_3:96033-96052 None:intergenic 30.0%
!! CTCGTAGCTTGTTTAATATT+GGG - chr2_3:96056-96075 None:intergenic 30.0%
!! TCTCGTAGCTTGTTTAATAT+TGG - chr2_3:96057-96076 None:intergenic 30.0%
AATGAGTAATGTGTAAAAGC+AGG - chr2_3:96379-96398 None:intergenic 30.0%
!! TGAACCTAGTATACTTTTTG+AGG + chr2_3:96516-96535 Msa0269360:intron 30.0%
! AAAGCCTCAAAAAGTATACT+AGG - chr2_3:96523-96542 None:intergenic 30.0%
AGAATGACAAAAATAGGAGT+AGG - chr2_3:96547-96566 None:intergenic 30.0%
ATCAACAGTATGAAAATCGT+TGG - chr2_3:96728-96747 None:intergenic 30.0%
! TCCCCAAGAAAAATAGTTTT+TGG + chr2_3:96927-96946 Msa0269360:intron 30.0%
!! CCTCCAAAAACTATTTTTCT+TGG - chr2_3:96933-96952 None:intergenic 30.0%
!! CCAAGAAAAATAGTTTTTGG+AGG + chr2_3:96930-96949 Msa0269360:intron 30.0%
! GGTATGAAGGTTGATTTATA+AGG + chr2_3:97017-97036 Msa0269360:intron 30.0%
!! AAAAGGCACTCTCAAATATA+TGG + chr2_3:97073-97092 Msa0269360:intron 30.0%
AGTCAAATTGAAGACATCTA+GGG - chr2_3:97130-97149 None:intergenic 30.0%
AAGTCAAATTGAAGACATCT+AGG - chr2_3:97131-97150 None:intergenic 30.0%
! ATGTCTTCAATTTGACTTCT+TGG + chr2_3:97133-97152 Msa0269360:intron 30.0%
! TTCAATTTGACTTCTTGGTA+TGG + chr2_3:97138-97157 Msa0269360:intron 30.0%
GTGAAGAAGAGACATATATA+TGG + chr2_3:97224-97243 Msa0269360:intron 30.0%
ATATATGGAGAAACCACTAA+AGG + chr2_3:97239-97258 Msa0269360:intron 30.0%
!!! AGTTTTGTTGTGCAATCATT+TGG + chr2_3:97355-97374 Msa0269360:intron 30.0%
AGCATAATCAATTGAAATCC+TGG + chr2_3:97645-97664 Msa0269360:intron 30.0%
TGTTAACAGAAAAGGGAAAT+TGG + chr2_3:97679-97698 Msa0269360:intron 30.0%
! CTTGTGTAATTATTCTGAGA+TGG - chr2_3:97737-97756 None:intergenic 30.0%
CAATGTTGAATACATAGAGA+TGG - chr2_3:97798-97817 None:intergenic 30.0%
CATCTCTATGTATTCAACAT+TGG + chr2_3:97796-97815 Msa0269360:intron 30.0%
TCTCTATGTATTCAACATTG+GGG + chr2_3:97798-97817 Msa0269360:intron 30.0%
!! TATGATGCATAAGAGTACTT+TGG + chr2_3:97830-97849 Msa0269360:intron 30.0%
!! ATAAGAGTACTTTGGATCAA+GGG + chr2_3:97838-97857 Msa0269360:intron 30.0%
!!! GCATAATGTAGTTTTTTGGT+CGG + chr2_3:97997-98016 Msa0269360:intron 30.0%
!!! CATAATGTAGTTTTTTGGTC+GGG + chr2_3:97998-98017 Msa0269360:intron 30.0%
! AGTTCTAACTTAGAAGACTT+AGG - chr2_3:98203-98222 None:intergenic 30.0%
ACATTAGTAAGCAAACCAAT+CGG - chr2_3:98601-98620 None:intergenic 30.0%
GAACTAATTGAATATGACAC+TGG + chr2_3:98916-98935 Msa0269360:three_prime_UTR 30.0%
! TTTCTATAGATTTTTGCCTG+TGG + chr2_3:99021-99040 Msa0269360:three_prime_UTR 30.0%
! TTCTATAGATTTTTGCCTGT+GGG + chr2_3:99022-99041 Msa0269360:three_prime_UTR 30.0%
AACCATCAACAAGCAAAACA+GGG - chr2_3:93663-93682 None:intergenic 35.0%
TAACCATCAACAAGCAAAAC+AGG - chr2_3:93664-93683 None:intergenic 35.0%
GTTACAATGTCTGTGGATAT+TGG + chr2_3:93680-93699 Msa0269360:CDS 35.0%
TAAGTTCGTCAATAAGCTTC+TGG - chr2_3:93753-93772 None:intergenic 35.0%
GGAAGAATATTCCTTGTGAT+TGG - chr2_3:93842-93861 None:intergenic 35.0%
!! TTAGGTTTCAGCTTTAAAGG+AGG + chr2_3:94022-94041 Msa0269360:intron 35.0%
!! TTAGTTTGCACAGATCAACA+AGG - chr2_3:94196-94215 None:intergenic 35.0%
TTGTTGATCTGTGCAAACTA+AGG + chr2_3:94195-94214 Msa0269360:intron 35.0%
! TATACTCTGGATGTTTTCAG+GGG + chr2_3:94320-94339 Msa0269360:intron 35.0%
CTTGTTTGGATAGTAGATCA+AGG + chr2_3:94609-94628 Msa0269360:intron 35.0%
GCTTGCATTGTAATTCTTGA+TGG + chr2_3:94912-94931 Msa0269360:intron 35.0%
AAACTTTCTCCTATTAAGGG+AGG + chr2_3:94988-95007 Msa0269360:intron 35.0%
!!! CTCTAGTACCATTTTGAGAT+GGG - chr2_3:95141-95160 None:intergenic 35.0%
!! TCTCTAGTACCATTTTGAGA+TGG - chr2_3:95142-95161 None:intergenic 35.0%
GAGAAGTAAAAACAATGCCT+TGG - chr2_3:95425-95444 None:intergenic 35.0%
ATTCACTAACCAGGATAGTA+AGG - chr2_3:95560-95579 None:intergenic 35.0%
GTCTTTAACATTCACTAACC+AGG - chr2_3:95569-95588 None:intergenic 35.0%
ATGTTAAAGACCATTGGCAT+AGG + chr2_3:95578-95597 Msa0269360:intron 35.0%
TGTTAAAGACCATTGGCATA+GGG + chr2_3:95579-95598 Msa0269360:intron 35.0%
AGTATTGCTTATCATTGCCT+TGG + chr2_3:95668-95687 Msa0269360:intron 35.0%
AAGGACTGACATACTTCTTA+AGG - chr2_3:95761-95780 None:intergenic 35.0%
AGCCAAATTCAGAGTCAAAT+AGG + chr2_3:95789-95808 Msa0269360:intron 35.0%
GCCAAATTCAGAGTCAAATA+GGG + chr2_3:95790-95809 Msa0269360:intron 35.0%
ACCCTATTTGACTCTGAATT+TGG - chr2_3:95794-95813 None:intergenic 35.0%
TCAGAATGAACGATAGCAAA+AGG - chr2_3:95819-95838 None:intergenic 35.0%
!!! AAGGTGGAAATTTTGATTCG+AGG + chr2_3:95990-96009 Msa0269360:intron 35.0%
! TTGTTGTTGGTACATGTCAT+TGG - chr2_3:96020-96039 None:intergenic 35.0%
ATGACATGTACCAACAACAA+TGG + chr2_3:96020-96039 Msa0269360:intron 35.0%
!! CGTTGATAATAGTTTGTCTG+TGG - chr2_3:96237-96256 None:intergenic 35.0%
CCACTTAAACATCCAAATGA+GGG - chr2_3:96354-96373 None:intergenic 35.0%
CCTCATTTGGATGTTTAAGT+GGG + chr2_3:96352-96371 Msa0269360:intron 35.0%
! AAAGTATATTGCTGGATTGG+AGG - chr2_3:96442-96461 None:intergenic 35.0%
! AGATGTTACCTTCTTTGAAG+AGG + chr2_3:96464-96483 Msa0269360:intron 35.0%
ATATGATGCCTCTTCAAAGA+AGG - chr2_3:96475-96494 None:intergenic 35.0%
TTTATATCCCTTGAACCCAT+CGG + chr2_3:96566-96585 Msa0269360:intron 35.0%
GAAACCTCTCATTATGCAAA+TGG + chr2_3:96637-96656 Msa0269360:intron 35.0%
CATTCCATTTGCATAATGAG+AGG - chr2_3:96644-96663 None:intergenic 35.0%
AGTATGAAAATCGTTGGAGT+CGG - chr2_3:96722-96741 None:intergenic 35.0%
! CGATTTTCATACTGTTGATC+TGG + chr2_3:96729-96748 Msa0269360:intron 35.0%
! TGTCTTTTGTCTTTCTTCCT+AGG + chr2_3:96811-96830 Msa0269360:intron 35.0%
!! TCTTCCTAGGAATTTTAGTG+AGG + chr2_3:96824-96843 Msa0269360:intron 35.0%
!! ACTATTTTTCTTGGGGAAAG+AGG - chr2_3:96924-96943 None:intergenic 35.0%
! AATTGAAGACATCTAGGGTA+CGG - chr2_3:97125-97144 None:intergenic 35.0%
TTCTTGGTATGGCAACTATT+TGG + chr2_3:97149-97168 Msa0269360:intron 35.0%
! ACTAAAGGTTTGTCGCTTAA+GGG + chr2_3:97254-97273 Msa0269360:intron 35.0%
AAGTTGTAGCGATCTCTTTA+TGG + chr2_3:97295-97314 Msa0269360:intron 35.0%
TTTAACTCTCCCCAAGTTTA+TGG - chr2_3:97540-97559 None:intergenic 35.0%
GAGATAGCTTATTCAGAGAA+TGG + chr2_3:97575-97594 Msa0269360:intron 35.0%
! TTTTCTGTTAACATCCACGA+GGG - chr2_3:97672-97691 None:intergenic 35.0%
TCGTGGATGTTAACAGAAAA+GGG + chr2_3:97672-97691 Msa0269360:intron 35.0%
AACAGAAAAGGGAAATTGGT+TGG + chr2_3:97683-97702 Msa0269360:intron 35.0%
!! CATAAGAGTACTTTGGATCA+AGG + chr2_3:97837-97856 Msa0269360:intron 35.0%
AAGACAATGGAAATGCATTG+TGG + chr2_3:97871-97890 Msa0269360:intron 35.0%
AGACAATGGAAATGCATTGT+GGG + chr2_3:97872-97891 Msa0269360:intron 35.0%
TGGGATATTCTGATGTAGAT+TGG + chr2_3:97891-97910 Msa0269360:intron 35.0%
GGGATATTCTGATGTAGATT+GGG + chr2_3:97892-97911 Msa0269360:intron 35.0%
ATTAGGTTTGATGCAATGTG+AGG - chr2_3:98151-98170 None:intergenic 35.0%
! TGAAATGATGGGATCATGTA+AGG + chr2_3:98467-98486 Msa0269360:intron 35.0%
TACTAACTACAACAGAGAAG+TGG - chr2_3:98548-98567 None:intergenic 35.0%
! TACAGATCCACTTCTTTTCA+AGG + chr2_3:98628-98647 Msa0269360:intron 35.0%
CAATCTACCTTGAAAAGAAG+TGG - chr2_3:98638-98657 None:intergenic 35.0%
! TATCAGATAACTTTTGCCTC+AGG - chr2_3:98705-98724 None:intergenic 35.0%
AGTTGAAACCCTTAACATCA+TGG + chr2_3:98860-98879 Msa0269360:three_prime_UTR 35.0%
GTTATCAGCCATGATGTTAA+GGG - chr2_3:98871-98890 None:intergenic 35.0%
AGTTATCAGCCATGATGTTA+AGG - chr2_3:98872-98891 None:intergenic 35.0%
TAGTTAGGTAGATGAGGAAG+AGG + chr2_3:93075-93094 Msa0269360:five_prime_UTR 40.0%
AGTTAGGTAGATGAGGAAGA+GGG + chr2_3:93076-93095 Msa0269360:five_prime_UTR 40.0%
!!! ATTCTTCTTGCTGCTGCTTT+TGG - chr2_3:93265-93284 None:intergenic 40.0%
TTGGCGTTAGAAGTGATTCT+AGG - chr2_3:93345-93364 None:intergenic 40.0%
TTCCTCAAGATATGGAAGGT+AGG + chr2_3:93378-93397 Msa0269360:intron 40.0%
TACCTACCTTCCATATCTTG+AGG - chr2_3:93383-93402 None:intergenic 40.0%
! TCTCGGCCTTCTTCTTTTTA+CGG - chr2_3:93531-93550 None:intergenic 40.0%
!! CAGCTGATTTGTGTAGTAGA+GGG - chr2_3:93605-93624 None:intergenic 40.0%
CTCTACTACACAAATCAGCT+GGG + chr2_3:93604-93623 Msa0269360:CDS 40.0%
!! GTTGATGGTTACAATGTCTG+TGG + chr2_3:93673-93692 Msa0269360:CDS 40.0%
CACCTTTAGTATGCTTAGAG+AGG + chr2_3:93774-93793 Msa0269360:CDS 40.0%
GACCTCTCTAAGCATACTAA+AGG - chr2_3:93779-93798 None:intergenic 40.0%
GTATTTGATGCCATGATGTC+TGG + chr2_3:93811-93830 Msa0269360:CDS 40.0%
TGAGAAAACAATGTCGATGC+CGG - chr2_3:93863-93882 None:intergenic 40.0%
!! GTTTCAGCTTTAAAGGAGGA+TGG + chr2_3:94026-94045 Msa0269360:CDS 40.0%
!! ATACTCTGGATGTTTTCAGG+GGG + chr2_3:94321-94340 Msa0269360:intron 40.0%
ACATGACCATACAGTTAACG+AGG + chr2_3:94490-94509 Msa0269360:intron 40.0%
TCTGAACCTCGTTAACTGTA+TGG - chr2_3:94499-94518 None:intergenic 40.0%
! GTAGATCAAGGCATCACAAA+AGG + chr2_3:94621-94640 Msa0269360:intron 40.0%
AAGAGATGCTTCAAGAGCAA+AGG + chr2_3:94650-94669 Msa0269360:CDS 40.0%
TGCACAGGCAATTAATACAC+AGG - chr2_3:94772-94791 None:intergenic 40.0%
! TTATGGCAGAACTTTTCTGC+AGG - chr2_3:94941-94960 None:intergenic 40.0%
TTCACCTATTGCTTGAACCA+GGG - chr2_3:95176-95195 None:intergenic 40.0%
TTTCACCTATTGCTTGAACC+AGG - chr2_3:95177-95196 None:intergenic 40.0%
ACTGCCTTCAACCATTAATC+TGG + chr2_3:95312-95331 Msa0269360:intron 40.0%
GTCACCAGATTAATGGTTGA+AGG - chr2_3:95319-95338 None:intergenic 40.0%
! GTGATTGGTCACCAGATTAA+TGG - chr2_3:95326-95345 None:intergenic 40.0%
!! GGCTCTAAATTACTTGTCCA+AGG + chr2_3:95405-95424 Msa0269360:intron 40.0%
GAGGAAAGTCTTGATGCAAT+GGG - chr2_3:95864-95883 None:intergenic 40.0%
AGAGGAAAGTCTTGATGCAA+TGG - chr2_3:95865-95884 None:intergenic 40.0%
AAGACGAATAAGGGACAAAG+AGG - chr2_3:95883-95902 None:intergenic 40.0%
TGTTGGTACATGTCATTGGT+AGG - chr2_3:96016-96035 None:intergenic 40.0%
GTGAAGTCAGTTACATCTGT+TGG - chr2_3:96081-96100 None:intergenic 40.0%
CGACACTTGATTCACTTGTT+GGG - chr2_3:96164-96183 None:intergenic 40.0%
CCAACAAGTGAATCAAGTGT+CGG + chr2_3:96162-96181 Msa0269360:intron 40.0%
CTAACATCCATGACAGATTG+TGG - chr2_3:96202-96221 None:intergenic 40.0%
CCCTCATTTGGATGTTTAAG+TGG + chr2_3:96351-96370 Msa0269360:intron 40.0%
CCCACTTAAACATCCAAATG+AGG - chr2_3:96355-96374 None:intergenic 40.0%
! ATTGCTGGATTGGAGGAATT+AGG - chr2_3:96435-96454 None:intergenic 40.0%
ATAATGAGAGGTTTCTGCTG+AGG - chr2_3:96632-96651 None:intergenic 40.0%
TGCAAATGGAATGTCATTCG+AGG + chr2_3:96651-96670 Msa0269360:intron 40.0%
GTATGAAAATCGTTGGAGTC+GGG - chr2_3:96721-96740 None:intergenic 40.0%
AGAGCCTCACTAAAATTCCT+AGG - chr2_3:96831-96850 None:intergenic 40.0%
GGCTCTCTCAATTGAGTTAA+AGG + chr2_3:96845-96864 Msa0269360:intron 40.0%
! CCAACAACAGTTTTTCGTCA+GGG - chr2_3:96981-97000 None:intergenic 40.0%
! TCCAACAACAGTTTTTCGTC+AGG - chr2_3:96982-97001 None:intergenic 40.0%
AAAGCTCGTGAACTGCAAAA+AGG + chr2_3:97056-97075 Msa0269360:intron 40.0%
GTATGGCAACTATTTGGCAT+TGG + chr2_3:97155-97174 Msa0269360:intron 40.0%
CTTAAGCGACAAACCTTTAG+TGG - chr2_3:97255-97274 None:intergenic 40.0%
! CACTAAAGGTTTGTCGCTTA+AGG + chr2_3:97253-97272 Msa0269360:intron 40.0%
! CTAAAGGTTTGTCGCTTAAG+GGG + chr2_3:97255-97274 Msa0269360:intron 40.0%
! TTTGTCGCTTAAGGGGATTA+AGG + chr2_3:97262-97281 Msa0269360:intron 40.0%
!! TGCAATCATTTGGTGTGACT+TGG + chr2_3:97365-97384 Msa0269360:intron 40.0%
! CTTTTCTGTTAACATCCACG+AGG - chr2_3:97673-97692 None:intergenic 40.0%
CTCGTGGATGTTAACAGAAA+AGG + chr2_3:97671-97690 Msa0269360:intron 40.0%
! ATTGGTTGGTTCAAGAGACT+AGG + chr2_3:97697-97716 Msa0269360:intron 40.0%
AGAGACTAGGTGGTAAATGT+AGG + chr2_3:97710-97729 Msa0269360:intron 40.0%
ACTCATCATGTTAACTGCGA+AGG - chr2_3:97766-97785 None:intergenic 40.0%
! TTGGAGCAAACCTTGTTTAC+TGG + chr2_3:97963-97982 Msa0269360:intron 40.0%
! TGAAACTGTTACTTCACGAG+TGG + chr2_3:98074-98093 Msa0269360:intron 40.0%
CTTTAACAGATCCTACCGAT+TGG + chr2_3:98583-98602 Msa0269360:intron 40.0%
TAGTAAGCAAACCAATCGGT+AGG - chr2_3:98597-98616 None:intergenic 40.0%
CAATCTTGATGCAGAAGTAG+TGG + chr2_3:98666-98685 Msa0269360:CDS 40.0%
!!! TTTTGTGTGGTTCTGGCCTT+CGG - chr2_3:93008-93027 None:intergenic 45.0%
TAGATGAGGAAGAGGGATGA+TGG + chr2_3:93083-93102 Msa0269360:five_prime_UTR 45.0%
! ATTCTAGGAGGAGTTGGAGT+TGG - chr2_3:93330-93349 None:intergenic 45.0%
! GAAGTGATTCTAGGAGGAGT+TGG - chr2_3:93336-93355 None:intergenic 45.0%
GCGTTAGAAGTGATTCTAGG+AGG - chr2_3:93342-93361 None:intergenic 45.0%
ACCTTCGCTTCCTCAAGATA+TGG + chr2_3:93370-93389 Msa0269360:CDS 45.0%
TCCATATCTTGAGGAAGCGA+AGG - chr2_3:93374-93393 None:intergenic 45.0%
TCGCTTCCTCAAGATATGGA+AGG + chr2_3:93374-93393 Msa0269360:CDS 45.0%
!!! GAGTGCTGGATTTTCGCTTT+TGG - chr2_3:93489-93508 None:intergenic 45.0%
CGGTAACTAGTTGAAGGTCT+TGG - chr2_3:93511-93530 None:intergenic 45.0%
AAAGAAGAAGGCCGAGAAAG+AGG + chr2_3:93534-93553 Msa0269360:CDS 45.0%
ATCCGCAAGATCCTCTTTCT+CGG - chr2_3:93548-93567 None:intergenic 45.0%
GATCACGATAGAGGTCAGTT+TGG - chr2_3:93573-93592 None:intergenic 45.0%
AGGTTGTTGGATCACGATAG+AGG - chr2_3:93582-93601 None:intergenic 45.0%
! CTGATTTGTGTAGTAGAGGG+AGG - chr2_3:93602-93621 None:intergenic 45.0%
!! CCAGCTGATTTGTGTAGTAG+AGG - chr2_3:93606-93625 None:intergenic 45.0%
CCTCTACTACACAAATCAGC+TGG + chr2_3:93603-93622 Msa0269360:CDS 45.0%
TACACAAATCAGCTGGGTCT+TGG + chr2_3:93610-93629 Msa0269360:CDS 45.0%
ACACAAATCAGCTGGGTCTT+GGG + chr2_3:93611-93630 Msa0269360:CDS 45.0%
!! GTCCCTGTTTTGCTTGTTGA+TGG + chr2_3:93658-93677 Msa0269360:CDS 45.0%
ATTGGGGAATCCAGACATCA+TGG - chr2_3:93824-93843 None:intergenic 45.0%
CTGATGCATCTGCTGATACA+TGG + chr2_3:93884-93903 Msa0269360:CDS 45.0%
TGTCAACAACAAGCAGCACA+TGG + chr2_3:94083-94102 Msa0269360:CDS 45.0%
! GATCAAGGCATCACAAAAGG+AGG + chr2_3:94624-94643 Msa0269360:intron 45.0%
! TATTGCGTCTCAAGTTGCAC+AGG - chr2_3:94787-94806 None:intergenic 45.0%
ATGAGCAATTGTAGTGGTGG+AGG - chr2_3:95227-95246 None:intergenic 45.0%
GGTATGAGCAATTGTAGTGG+TGG - chr2_3:95230-95249 None:intergenic 45.0%
GTCGGTATGAGCAATTGTAG+TGG - chr2_3:95233-95252 None:intergenic 45.0%
! TCTGGAACAGTTAAAGGCGT+GGG - chr2_3:95521-95540 None:intergenic 45.0%
! ATCTGGAACAGTTAAAGGCG+TGG - chr2_3:95522-95541 None:intergenic 45.0%
CTATCTGTAGAGATCTCCCA+TGG + chr2_3:95622-95641 Msa0269360:intron 45.0%
TACTGAGAGACTCAGTAGCA+GGG - chr2_3:95652-95671 None:intergenic 45.0%
ATACTGAGAGACTCAGTAGC+AGG - chr2_3:95653-95672 None:intergenic 45.0%
! GATTCACTTGTTGGGTGTGA+GGG - chr2_3:96156-96175 None:intergenic 45.0%
! TGATTCACTTGTTGGGTGTG+AGG - chr2_3:96157-96176 None:intergenic 45.0%
CCGACACTTGATTCACTTGT+TGG - chr2_3:96165-96184 None:intergenic 45.0%
!! ACAAGTGAATCAAGTGTCGG+TGG + chr2_3:96165-96184 Msa0269360:intron 45.0%
GAAAACGCCACAATCTGTCA+TGG + chr2_3:96192-96211 Msa0269360:intron 45.0%
AGATCTTCCAGCATCCACAA+TGG + chr2_3:96324-96343 Msa0269360:intron 45.0%
CGGGAACAATCATCTCATCA+TGG - chr2_3:96875-96894 None:intergenic 45.0%
TTCCACATGTCGTTATACGC+GGG - chr2_3:96894-96913 None:intergenic 45.0%
GTTCCACATGTCGTTATACG+CGG - chr2_3:96895-96914 None:intergenic 45.0%
CCCTGACGAAAAACTGTTGT+TGG + chr2_3:96978-96997 Msa0269360:intron 45.0%
TTCACGATGACAAGGAAGGA+AGG - chr2_3:97209-97228 None:intergenic 45.0%
CTTCTTCACGATGACAAGGA+AGG - chr2_3:97213-97232 None:intergenic 45.0%
GTCTCTTCTTCACGATGACA+AGG - chr2_3:97217-97236 None:intergenic 45.0%
CTTATTCAGAGAATGGCACG+CGG + chr2_3:97582-97601 Msa0269360:intron 45.0%
GGGTTGTTGTGTGAAGACAA+TGG + chr2_3:97858-97877 Msa0269360:intron 45.0%
GTGGGTGATTGATTGTGCTT+AGG + chr2_3:98400-98419 Msa0269360:intron 45.0%
!! ATAAATTAAATAAATAAGTA+AGG - chr2_3:93406-93425 None:intergenic 5.0%
! ATGAGGAAGAGGGATGATGG+AGG + chr2_3:93086-93105 Msa0269360:five_prime_UTR 50.0%
!!! CTTCTTGCTGCTGCTTTTGG+AGG - chr2_3:93262-93281 None:intergenic 50.0%
GAGGAAGCGAAGGTTCTGTT+TGG - chr2_3:93364-93383 None:intergenic 50.0%
AGTTGAAGGTCTTGGAGTGC+TGG - chr2_3:93503-93522 None:intergenic 50.0%
GTGTAGTAGAGGGAGGTTGT+TGG - chr2_3:93595-93614 None:intergenic 50.0%
CACAAATCAGCTGGGTCTTG+GGG + chr2_3:93612-93631 Msa0269360:CDS 50.0%
ACAAATCAGCTGGGTCTTGG+GGG + chr2_3:93613-93632 Msa0269360:CDS 50.0%
GTCTGGATTCCCCAATCACA+AGG + chr2_3:93828-93847 Msa0269360:CDS 50.0%
AAGTGACGACCCAGACTTTG+GGG - chr2_3:94055-94074 None:intergenic 50.0%
GAAGTGACGACCCAGACTTT+GGG - chr2_3:94056-94075 None:intergenic 50.0%
AGAAGTGACGACCCAGACTT+TGG - chr2_3:94057-94076 None:intergenic 50.0%
!! GTTTTCAGGGGGCCTTTGTT+TGG + chr2_3:94332-94351 Msa0269360:intron 50.0%
TGCCTTGCTGCTCCAAACAA+AGG - chr2_3:94347-94366 None:intergenic 50.0%
! TGTTTGGAGCAGCAAGGCAT+TGG + chr2_3:94348-94367 Msa0269360:CDS 50.0%
CTATTGCTTGAACCAGGGCT+AGG - chr2_3:95171-95190 None:intergenic 50.0%
CTAGCCCTGGTTCAAGCAAT+AGG + chr2_3:95169-95188 Msa0269360:intron 50.0%
TGCTTCATGCCCTATGCCAA+TGG - chr2_3:95591-95610 None:intergenic 50.0%
TCAGTAGCAGGGCATACCAT+GGG - chr2_3:95641-95660 None:intergenic 50.0%
GATGCAATGGGTACGTAGCT+TGG - chr2_3:95852-95871 None:intergenic 50.0%
!! TGAATCAAGTGTCGGTGGTG+AGG + chr2_3:96170-96189 Msa0269360:intron 50.0%
CAAATGAGGGAGCTCCATTG+TGG - chr2_3:96341-96360 None:intergenic 50.0%
CACAATGGAGCTCCCTCATT+TGG + chr2_3:96339-96358 Msa0269360:intron 50.0%
ATATCCCTTGAACCCATCGG+CGG + chr2_3:96569-96588 Msa0269360:intron 50.0%
!! GTCTTCTAGAATCCGCCGAT+GGG - chr2_3:96584-96603 None:intergenic 50.0%
!! AGTCTTCTAGAATCCGCCGA+TGG - chr2_3:96585-96604 None:intergenic 50.0%
TTCCCGCGTATAACGACATG+TGG + chr2_3:96889-96908 Msa0269360:intron 50.0%
ATTGAAATCCTGGACCCTCG+TGG + chr2_3:97655-97674 Msa0269360:intron 50.0%
! GGTTGGTTCAAGAGACTAGG+TGG + chr2_3:97700-97719 Msa0269360:intron 50.0%
!!! AGTTTTTTGGTCGGGTGTGC+AGG + chr2_3:98006-98025 Msa0269360:intron 50.0%
!! TGGATGCTCTGAAGAACCTG+AGG + chr2_3:98686-98705 Msa0269360:CDS 50.0%
! CAGCGATTTTGCATTCCCAC+AGG - chr2_3:99040-99059 None:intergenic 50.0%
!!! CTTGCTGCTGCTTTTGGAGG+AGG - chr2_3:93259-93278 None:intergenic 55.0%
GGAGGAGTTGGAGTTGGAGT+TGG - chr2_3:93324-93343 None:intergenic 55.0%
GGCCGAGAAAGAGGATCTTG+CGG + chr2_3:93543-93562 Msa0269360:CDS 55.0%
AGGATGGTTGCCCCAAAGTC+TGG + chr2_3:94042-94061 Msa0269360:CDS 55.0%
GGATGGTTGCCCCAAAGTCT+GGG + chr2_3:94043-94062 Msa0269360:CDS 55.0%
! GGCCTTTGTTTGGAGCAGCA+AGG + chr2_3:94342-94361 Msa0269360:CDS 55.0%
!! CAGCAAGGCATTGGTAACCG+AGG + chr2_3:94357-94376 Msa0269360:CDS 55.0%
TAGAGAAACCCACCTAGCCC+TGG + chr2_3:95156-95175 Msa0269360:intron 55.0%
TGCTTGAACCAGGGCTAGGT+GGG - chr2_3:95167-95186 None:intergenic 55.0%
TTGCTTGAACCAGGGCTAGG+TGG - chr2_3:95168-95187 None:intergenic 55.0%
CTCAGTAGCAGGGCATACCA+TGG - chr2_3:95642-95661 None:intergenic 55.0%
CTTGTTGGGTGTGAGGGTCA+AGG - chr2_3:96150-96169 None:intergenic 55.0%
! GAATCCGCCGATGGGTTCAA+GGG - chr2_3:96576-96595 None:intergenic 55.0%
! AGAATCCGCCGATGGGTTCA+AGG - chr2_3:96577-96596 None:intergenic 55.0%
GTTAACATCCACGAGGGTCC+AGG - chr2_3:97666-97685 None:intergenic 55.0%
TGGGTGTGAGGGTCAAGGTG+TGG - chr2_3:96145-96164 None:intergenic 60.0%
GGGAGCTCCATTGTGGATGC+TGG - chr2_3:96334-96353 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 92991 99098 92991 ID=Msa0269360;Name=Msa0269360
chr2_3 mRNA 92991 99098 92991 ID=Msa0269360-mRNA-1;Parent=Msa0269360;Name=Msa0269360-mRNA-1;_AED=0.04;_eAED=0.04;_QI=129|1|1|1|1|1|6|360|329
chr2_3 exon 92991 93395 92991 ID=Msa0269360-mRNA-1:exon:75;Parent=Msa0269360-mRNA-1
chr2_3 exon 93481 93918 93481 ID=Msa0269360-mRNA-1:exon:76;Parent=Msa0269360-mRNA-1
chr2_3 exon 94026 94109 94026 ID=Msa0269360-mRNA-1:exon:77;Parent=Msa0269360-mRNA-1
chr2_3 exon 94340 94378 94340 ID=Msa0269360-mRNA-1:exon:78;Parent=Msa0269360-mRNA-1
chr2_3 exon 94625 94671 94625 ID=Msa0269360-mRNA-1:exon:79;Parent=Msa0269360-mRNA-1
chr2_3 exon 98633 99098 98633 ID=Msa0269360-mRNA-1:exon:80;Parent=Msa0269360-mRNA-1
chr2_3 five_prime_UTR 92991 93119 92991 ID=Msa0269360-mRNA-1:five_prime_utr;Parent=Msa0269360-mRNA-1
chr2_3 CDS 93120 93395 93120 ID=Msa0269360-mRNA-1:cds;Parent=Msa0269360-mRNA-1
chr2_3 CDS 93481 93918 93481 ID=Msa0269360-mRNA-1:cds;Parent=Msa0269360-mRNA-1
chr2_3 CDS 94026 94109 94026 ID=Msa0269360-mRNA-1:cds;Parent=Msa0269360-mRNA-1
chr2_3 CDS 94340 94378 94340 ID=Msa0269360-mRNA-1:cds;Parent=Msa0269360-mRNA-1
chr2_3 CDS 94625 94671 94625 ID=Msa0269360-mRNA-1:cds;Parent=Msa0269360-mRNA-1
chr2_3 CDS 98633 98738 98633 ID=Msa0269360-mRNA-1:cds;Parent=Msa0269360-mRNA-1
chr2_3 three_prime_UTR 98739 99098 98739 ID=Msa0269360-mRNA-1:three_prime_utr;Parent=Msa0269360-mRNA-1
Gene Sequence

>Msa0269360

ATGAAGATGAAACTGAAATTAGTTCCATTATCATCATCTTGTTCGTTAGCAGCTGCTGCAGTACTGTGTGATTCCAATTCCAATTACAATTACAATAAGAAGAAGAGACACAGCAGTATGAATATGATAGTATACTCCTCCTCCAAAAGCAGCAGCAAGAAGAATGATTCTTCTAATTCTAATTCTAATTCTAATTCTCAACCAACTCCAACTCCAACTCCTCCTAGAATCACTTCTAACGCCAAACAGAACCTTCGCTTCCTCAAGATATGGAAGGAGTACCAAAAGCGAAAATCCAGCACTCCAAGACCTTCAACTAGTTACCGTAAAAAGAAGAAGGCCGAGAAAGAGGATCTTGCGGATGACCAAACTGACCTCTATCGTGATCCAACAACCTCCCTCTACTACACAAATCAGCTGGGTCTTGGGGGTTTAATTGACAATGCTGCTGCTGTCCCTGTTTTGCTTGTTGATGGTTACAATGTCTGTGGATATTGGATGAAACTCAAAAAACATTTTCTCAATGGCAAACTTGAACTTGCTCGCCAGAAGCTTATTGACGAACTTATCACCTTTAGTATGCTTAGAGAGGTCAAAGTCGTTGTTGTATTTGATGCCATGATGTCTGGATTCCCCAATCACAAGGAATATTCTTCCGGCATCGACATTGTTTTCTCAACTGATGCATCTGCTGATACATGGATTGAAAAAGAGGTTTCAGCTTTAAAGGAGGATGGTTGCCCCAAAGTCTGGGTCGTCACTTCTGATCACTGTCAACAACAAGCAGCACATGGAGCAGGGGCCTTTGTTTGGAGCAGCAAGGCATTGGTAACCGAGATCAAGGCATCACAAAAGGAGGTTGAAGAGATGCTTCAAGAGCAAAGATCCACTTCTTTTCAAGGTAGATTGTTGAAGCACAATCTTGATGCAGAAGTAGTGGATGCTCTGAAGAACCTGAGGCAAAAGTTATCTGATAATGAGTTGAAGTAA

Protein sequence

>Msa0269360

MKMKLKLVPLSSSCSLAAAAVLCDSNSNYNYNKKKRHSSMNMIVYSSSKSSSKKNDSSNSNSNSNSQPTPTPTPPRITSNAKQNLRFLKIWKEYQKRKSSTPRPSTSYRKKKKAEKEDLADDQTDLYRDPTTSLYYTNQLGLGGLIDNAAAVPVLLVDGYNVCGYWMKLKKHFLNGKLELARQKLIDELITFSMLREVKVVVVFDAMMSGFPNHKEYSSGIDIVFSTDASADTWIEKEVSALKEDGCPKVWVVTSDHCQQQAAHGAGAFVWSSKALVTEIKASQKEVEEMLQEQRSTSFQGRLLKHNLDAEVVDALKNLRQKLSDNELK*