AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1246740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1246740 MtrunA17_Chr8g0367611 92.050 239 4 2 1 224 1 239 6.57e-160 441
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1246740 AT4G38090.1 67.157 204 52 1 36 224 30 233 6.70e-95 277
Msa1246740 AT4G38090.2 68.182 154 34 1 36 174 30 183 5.16e-68 207
Msa1246740 AT4G38090.3 66.667 135 30 1 36 155 30 164 6.41e-56 177

Find 69 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTGAATTTCAGGTATTT+TGG 0.175352 8_2:-38609205 Msa1246740:intron
TACAGATCTTTATTTATATA+AGG 0.195714 8_2:-38607383 Msa1246740:three_prime_UTR
GCTCAGTACATATTAAAATT+TGG 0.231321 8_2:-38607526 Msa1246740:three_prime_UTR
TGGCCTTGGGTGCTGCTAAT+AGG 0.282907 8_2:-38607506 Msa1246740:three_prime_UTR
TATTCTGCCATTTCTACTTC+AGG 0.310585 8_2:-38609482 Msa1246740:CDS
GGAGGATTAGTCAGGGCTTA+TGG 0.319341 8_2:-38609163 Msa1246740:CDS
CGCCATGTCTTTCCTTTCTC+AGG 0.319482 8_2:-38611691 Msa1246740:intron
TACATATTAAAATTTGGCCT+TGG 0.337999 8_2:-38607520 Msa1246740:three_prime_UTR
ACAGATCTTTATTTATATAA+GGG 0.345317 8_2:-38607382 Msa1246740:three_prime_UTR
GTAGAAATGGCAGAATATAT+TGG 0.357352 8_2:+38609488 None:intergenic
AGCAAGTTCATCGCCATTGC+TGG 0.358510 8_2:-38611735 Msa1246740:CDS
CTTCAATTCTCTGCTACAAT+TGG 0.371279 8_2:+38607694 None:intergenic
ACATATTAAAATTTGGCCTT+GGG 0.389239 8_2:-38607519 Msa1246740:three_prime_UTR
ATCTATTCCTGAAGTAGAAA+TGG 0.405084 8_2:+38609475 None:intergenic
GAAGTTCCCTTTGACTTACT+TGG 0.414507 8_2:-38608935 Msa1246740:CDS
GTTACTACTGCTGCTGGTGC+TGG 0.428535 8_2:+38611818 None:intergenic
ACTGCTGCTGGTGCTGGCCA+TGG 0.446969 8_2:+38611824 None:intergenic
GCTGGCCATGGTGGTGAACT+TGG 0.448631 8_2:+38611836 None:intergenic
TGAAGGTTCACCATCATCAT+TGG 0.449328 8_2:+38609526 None:intergenic
AATGATGATGGTGAACCTTC+AGG 0.453113 8_2:-38609524 Msa1246740:CDS
GAGTAATGGTGGTTGTGATC+AGG 0.457877 8_2:-38609451 Msa1246740:intron
TAGGCACTGGAGGATTAGTC+AGG 0.464593 8_2:-38609171 Msa1246740:CDS
TGAAAGCCATGGTGTGGACC+AGG 0.477157 8_2:+38607463 None:intergenic
AGCAGCAGTAGTAACAATTC+AGG 0.485864 8_2:-38611810 Msa1246740:CDS
GATACATGGTAGATGCAACT+TGG 0.488208 8_2:-38607583 Msa1246740:intron
GTGGTGATGGTGATGATGAA+TGG 0.504424 8_2:+38611890 None:intergenic
TGAATTGTTACTACTGCTGC+TGG 0.507532 8_2:+38611812 None:intergenic
GGTGAACCTTCAGGTACGGC+TGG 0.510327 8_2:-38609515 Msa1246740:CDS
AACAGGTAGGGGATCAATAT+CGG 0.518719 8_2:-38609550 Msa1246740:intron
GAGTACTCCAAGTAAGTCAA+AGG 0.524758 8_2:+38608928 None:intergenic
GGTGGAATCAAATTAGGCAC+TGG 0.526846 8_2:-38609184 Msa1246740:CDS
ACTTGGAGTACTCTACCATC+AGG 0.530701 8_2:-38608918 Msa1246740:intron
TGGTGATGGTGATGATGAAT+GGG 0.534532 8_2:+38611891 None:intergenic
TGACCGAGCTGAGAAATTGG+AGG 0.535069 8_2:-38607729 Msa1246740:CDS
CAATATCGGTCCAATGATGA+TGG 0.537565 8_2:-38609536 Msa1246740:CDS
TGCAAAATGTAGGTGCCAAT+GGG 0.540519 8_2:-38608962 Msa1246740:intron
ATGAAGCAAGATTATGATAC+GGG 0.544351 8_2:-38607791 Msa1246740:CDS
AATGTAGGTGCCAATGGGTG+TGG 0.545761 8_2:-38608957 Msa1246740:intron
GGAGGTAAGTAACCTGAGAA+AGG 0.548274 8_2:+38611679 None:intergenic
CATGAAGCAAGATTATGATA+CGG 0.552558 8_2:-38607792 Msa1246740:CDS
ATCGGAGACGGAGCCAGCAA+TGG 0.555274 8_2:+38611722 None:intergenic
AAGGGAACTTCCACACCCAT+TGG 0.558066 8_2:+38608947 None:intergenic
GGCGGATTTGTCATCGGAGA+CGG 0.561818 8_2:+38611710 None:intergenic
GTGCAAAATGTAGGTGCCAA+TGG 0.562081 8_2:-38608963 Msa1246740:intron
GCTGCTGGTGCTGGCCATGG+TGG 0.572077 8_2:+38611827 None:intergenic
CGTAGATTCGATGGTGGTGA+TGG 0.574650 8_2:+38611877 None:intergenic
ATCAACTTTAAAAGTAACCA+TGG 0.577405 8_2:+38607754 None:intergenic
TATCCTCCAATTTCTCAGCT+CGG 0.580898 8_2:+38607726 None:intergenic
AGTACTCCAAGTAAGTCAAA+GGG 0.581416 8_2:+38608929 None:intergenic
AGACATGGCGGATTTGTCAT+CGG 0.590273 8_2:+38611704 None:intergenic
AGAGTGAAGCGTAGATTCGA+TGG 0.594090 8_2:+38611868 None:intergenic
CATGGTGGTGAACTTGGCTA+TGG 0.594434 8_2:+38611842 None:intergenic
AGTCCTATTAGCAGCACCCA+AGG 0.603654 8_2:+38607503 None:intergenic
TTCAGGAATAGATAGAGTAA+TGG 0.614320 8_2:-38609465 Msa1246740:CDS
GGAATCAAATTAGGCACTGG+AGG 0.620300 8_2:-38609181 Msa1246740:CDS
AGGAATAGATAGAGTAATGG+TGG 0.624510 8_2:-38609462 Msa1246740:CDS
GGGTAAAGATGACATATCCA+TGG 0.627852 8_2:-38607771 Msa1246740:CDS
AGGCACTGGAGGATTAGTCA+GGG 0.639494 8_2:-38609170 Msa1246740:CDS
ATGAGACCTGGTCCACACCA+TGG 0.642651 8_2:-38607469 Msa1246740:three_prime_UTR
CATAGCCAAGTTCACCACCA+TGG 0.669889 8_2:-38611841 Msa1246740:CDS
GGATTAGTCAGGGCTTATGG+AGG 0.675051 8_2:-38609160 Msa1246740:CDS
TGATGGTGAACCTTCAGGTA+CGG 0.683336 8_2:-38609519 Msa1246740:CDS
ATGATGAATGTGGCACACGC+AGG 0.700097 8_2:-38607548 Msa1246740:three_prime_UTR
GTGAAGCGTAGATTCGATGG+TGG 0.707993 8_2:+38611871 None:intergenic
AACTTGCCTTGTGAAAACAA+AGG 0.713384 8_2:-38609107 Msa1246740:intron
TGAAGATGTGATGATGAATG+TGG 0.714206 8_2:-38607558 Msa1246740:three_prime_UTR
AACCTGAGAAAGGAAAGACA+TGG 0.732993 8_2:+38611689 None:intergenic
CTGAGAAAGGAAAGACATGG+CGG 0.737065 8_2:+38611692 None:intergenic
GAGATGTTGAGAGATGCTTG+TGG 0.756493 8_2:-38611925 Msa1246740:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAAAAAAAACATTGA+TGG + chr8_2:38607771-38607790 None:intergenic 10.0%
!! TGAAAAATATAATTTAAATC+GGG + chr8_2:38611664-38611683 None:intergenic 10.0%
!!! TTTTTACTTTGTTTATTGTT+AGG - chr8_2:38607701-38607720 Msa1246740:CDS 15.0%
!!! TGTTTTAAAATTTTGTGAAT+CGG + chr8_2:38609430-38609449 None:intergenic 15.0%
!! CTATTAAAAATAGAATGAAT+AGG + chr8_2:38609489-38609508 None:intergenic 15.0%
!!! CTATTCATTCTATTTTTAAT+AGG - chr8_2:38609487-38609506 Msa1246740:CDS 15.0%
!!! TGAATAAGCAATTTTTATTT+TGG - chr8_2:38609519-38609538 Msa1246740:CDS 15.0%
!! ATATGTGAAATGTTAAAATT+AGG + chr8_2:38609898-38609917 None:intergenic 15.0%
!! TTTCTATTATAAAAACATGT+TGG + chr8_2:38611184-38611203 None:intergenic 15.0%
!!! TACAGATCTTTATTTATATA+AGG - chr8_2:38611925-38611944 Msa1246740:exon 15.0%
!!! ACAGATCTTTATTTATATAA+GGG - chr8_2:38611926-38611945 Msa1246740:exon 15.0%
!! TAATAATAATAGAAAATGGG+AGG + chr8_2:38607650-38607669 None:intergenic 20.0%
!! TAACGTGTTTGAATAAAAAA+TGG - chr8_2:38608089-38608108 Msa1246740:intron 20.0%
!!! ATAAATTGGATTCTTGTTTT+TGG - chr8_2:38608239-38608258 Msa1246740:intron 20.0%
!!! AAAAAGTATTGTGAATGTTA+AGG - chr8_2:38608352-38608371 Msa1246740:intron 20.0%
!!! AAAAGTATTGTGAATGTTAA+GGG - chr8_2:38608353-38608372 Msa1246740:intron 20.0%
!! TTATAATGTGTCAGTAAAAA+TGG + chr8_2:38609390-38609409 None:intergenic 20.0%
!!! TTGGTTTTAATTTCTTTGAT+TGG - chr8_2:38609623-38609642 Msa1246740:intron 20.0%
!!! TTTAATTTCTTTGATTGGAT+TGG - chr8_2:38609628-38609647 Msa1246740:intron 20.0%
!!! ATATTGAATTTCAGGTATTT+TGG - chr8_2:38610103-38610122 Msa1246740:intron 20.0%
!! AATAAAATTGTGCAAAATGT+AGG - chr8_2:38610336-38610355 Msa1246740:intron 20.0%
!! AAGAAGGATATTCATAATAA+GGG + chr8_2:38610445-38610464 None:intergenic 20.0%
!! TAAGAAGGATATTCATAATA+AGG + chr8_2:38610446-38610465 None:intergenic 20.0%
!!! GATTTTCTCAAAATTATGTT+TGG - chr8_2:38610513-38610532 Msa1246740:intron 20.0%
!!! TGGAAACATTTTAAAACAAT+TGG - chr8_2:38610733-38610752 Msa1246740:intron 20.0%
!! ATGTAAAGAATCAAACAATT+TGG + chr8_2:38610809-38610828 None:intergenic 20.0%
!! TGATTCTTTACATTTAAAGA+AGG - chr8_2:38610816-38610835 Msa1246740:intron 20.0%
!!! ACTTTAATTCAGTCATTTTT+AGG - chr8_2:38610938-38610957 Msa1246740:intron 20.0%
!! CATATAGTTTACATATTTGA+AGG + chr8_2:38611251-38611270 None:intergenic 20.0%
!!! ACACTATCTGTTATTATTTT+TGG - chr8_2:38611340-38611359 Msa1246740:intron 20.0%
!!! GTTTTAGAAAAAAATGATTG+TGG + chr8_2:38611370-38611389 None:intergenic 20.0%
!! ACTTTGTTTATTGTTAGGTT+CGG - chr8_2:38607706-38607725 Msa1246740:CDS 25.0%
!! TCATTTTCTCAGATTATTAC+CGG + chr8_2:38607869-38607888 None:intergenic 25.0%
! ACTAAATTGCATGTAGAATT+AGG - chr8_2:38608051-38608070 Msa1246740:intron 25.0%
! CTAAATTGCATGTAGAATTA+GGG - chr8_2:38608052-38608071 Msa1246740:intron 25.0%
! AATGGGTAATTTGATGTTAT+AGG - chr8_2:38608382-38608401 Msa1246740:intron 25.0%
! ATTAGACTATTCATTAGTGT+TGG - chr8_2:38608515-38608534 Msa1246740:intron 25.0%
!! ATTAGTGTTGGATGAATTTA+TGG - chr8_2:38608527-38608546 Msa1246740:intron 25.0%
!! TTAGTGTTGGATGAATTTAT+GGG - chr8_2:38608528-38608547 Msa1246740:intron 25.0%
!! TTTGTATGTTTAATTTCCTG+TGG - chr8_2:38608604-38608623 Msa1246740:intron 25.0%
!! TTGTATGTTTAATTTCCTGT+GGG - chr8_2:38608605-38608624 Msa1246740:intron 25.0%
! TTTAGAGAATATAAACAGCA+CGG + chr8_2:38608713-38608732 None:intergenic 25.0%
! ATTAACACCAAGACAATAAA+GGG + chr8_2:38608871-38608890 None:intergenic 25.0%
! TATTAACACCAAGACAATAA+AGG + chr8_2:38608872-38608891 None:intergenic 25.0%
!! TTTCATTTTCTGTTGAATTG+CGG - chr8_2:38609080-38609099 Msa1246740:intron 25.0%
! TTTAGTTATAGCACATGATT+AGG - chr8_2:38609230-38609249 Msa1246740:intron 25.0%
!!! ACTAAAAGAATTTCTGGTAA+AGG + chr8_2:38609575-38609594 None:intergenic 25.0%
! TCAAAGAAATTAAAACCAAC+TGG + chr8_2:38609622-38609641 None:intergenic 25.0%
! GTTTAAGTAATTACTTCTGT+TGG - chr8_2:38609936-38609955 Msa1246740:intron 25.0%
! TTTAACCATTGACAAAATAG+CGG - chr8_2:38609986-38610005 Msa1246740:intron 25.0%
!!! GATTTTTTCGTACATTTCAA+GGG - chr8_2:38610026-38610045 Msa1246740:intron 25.0%
! TGTGATCTATATTGAATTTC+AGG - chr8_2:38610095-38610114 Msa1246740:intron 25.0%
!!! TATTTTGGTGGAATCAAATT+AGG - chr8_2:38610118-38610137 Msa1246740:intron 25.0%
!! TTTAAAACAATTGGCAAGAT+AGG - chr8_2:38610742-38610761 Msa1246740:intron 25.0%
! TCTTTACATTTAAAGAAGGT+AGG - chr8_2:38610820-38610839 Msa1246740:intron 25.0%
!! CTGAATTAAAGTTATTTCAC+CGG + chr8_2:38610930-38610949 None:intergenic 25.0%
!! AGTGTACCTGTATAAATTTT+GGG - chr8_2:38610994-38611013 Msa1246740:intron 25.0%
! TACATACCCAAAATTTATAC+AGG + chr8_2:38611003-38611022 None:intergenic 25.0%
!!! AGATTTTAATGAATCCACTA+TGG - chr8_2:38611092-38611111 Msa1246740:intron 25.0%
! GAATGTAAGAGTAATATTCA+TGG + chr8_2:38611218-38611237 None:intergenic 25.0%
!! ATCAACTTTAAAAGTAACCA+TGG + chr8_2:38611557-38611576 None:intergenic 25.0%
! GCTCAGTACATATTAAAATT+TGG - chr8_2:38611782-38611801 Msa1246740:CDS 25.0%
! TACATATTAAAATTTGGCCT+TGG - chr8_2:38611788-38611807 Msa1246740:CDS 25.0%
!! ACATATTAAAATTTGGCCTT+GGG - chr8_2:38611789-38611808 Msa1246740:CDS 25.0%
!!! ACAATAATTTTTGAAAGCCA+TGG + chr8_2:38611859-38611878 None:intergenic 25.0%
! CTTTGTTTATTGTTAGGTTC+GGG - chr8_2:38607707-38607726 Msa1246740:CDS 30.0%
GTGTTAATTTATGTTGTTCG+AGG - chr8_2:38607978-38607997 Msa1246740:intron 30.0%
! ATAGTGATTTGGCATTGAAA+CGG + chr8_2:38608030-38608049 None:intergenic 30.0%
GCAATTTAGTCATAGTGATT+TGG + chr8_2:38608041-38608060 None:intergenic 30.0%
TGTTTGAATAAAAAATGGCG+TGG - chr8_2:38608094-38608113 Msa1246740:intron 30.0%
! ATGTTATCTATGTTGATTGC+TGG - chr8_2:38608295-38608314 Msa1246740:intron 30.0%
! TTTTGGTCCATGTTAATTAG+AGG - chr8_2:38608328-38608347 Msa1246740:intron 30.0%
! CTTTTTGCCTCTAATTAACA+TGG + chr8_2:38608338-38608357 None:intergenic 30.0%
TATTGTGAATGTTAAGGGAA+AGG - chr8_2:38608358-38608377 Msa1246740:intron 30.0%
AATGTTAAGGGAAAGGAAAT+GGG - chr8_2:38608365-38608384 Msa1246740:intron 30.0%
AACTATGCAGATAATGAAGT+TGG - chr8_2:38608405-38608424 Msa1246740:intron 30.0%
TGGTGAAAACTACTGTAAAA+TGG - chr8_2:38608457-38608476 Msa1246740:intron 30.0%
AATGAAGCACAATTACACAT+CGG + chr8_2:38608498-38608517 None:intergenic 30.0%
TATGCAAATAGTTTAGCGTT+TGG - chr8_2:38608636-38608655 Msa1246740:intron 30.0%
TTGTGTTCTTGATAAGGTAT+TGG - chr8_2:38608760-38608779 Msa1246740:intron 30.0%
!! CTTTATTGACTTAGACTCTA+TGG - chr8_2:38608810-38608829 Msa1246740:intron 30.0%
!! TTGTCTTGGTGTTAATATGA+CGG - chr8_2:38608875-38608894 Msa1246740:intron 30.0%
! TTCATTTTCTGTTGAATTGC+GGG - chr8_2:38609081-38609100 Msa1246740:intron 30.0%
AGCTCTATTCTTCTTGAATT+TGG - chr8_2:38609191-38609210 Msa1246740:CDS 30.0%
! TCTGAGACTAAAAGAATTTC+TGG + chr8_2:38609581-38609600 None:intergenic 30.0%
TATCTTATCTTTCGTTCAAC+AGG - chr8_2:38609741-38609760 Msa1246740:intron 30.0%
GTAGAAATGGCAGAATATAT+TGG + chr8_2:38609823-38609842 None:intergenic 30.0%
ATCTATTCCTGAAGTAGAAA+TGG + chr8_2:38609836-38609855 None:intergenic 30.0%
TTCAGGAATAGATAGAGTAA+TGG - chr8_2:38609843-38609862 Msa1246740:intron 30.0%
!!! GGATTTTTTCGTACATTTCA+AGG - chr8_2:38610025-38610044 Msa1246740:intron 30.0%
AGCATTTCATCCTTTGATAT+TGG - chr8_2:38610052-38610071 Msa1246740:intron 30.0%
TCATCCTTTGATATTGGATT+TGG - chr8_2:38610058-38610077 Msa1246740:intron 30.0%
TGTTCCAAATCCAATATCAA+AGG + chr8_2:38610065-38610084 None:intergenic 30.0%
!! TTGAATTTCAGGTATTTTGG+TGG - chr8_2:38610106-38610125 Msa1246740:intron 30.0%
TAAAACCAAAGATGCATTAC+AGG + chr8_2:38610242-38610261 None:intergenic 30.0%
! TCTATTTTATTATCCTACCC+AGG + chr8_2:38610477-38610496 None:intergenic 30.0%
GGTAGGATAATAAAATAGAC+TGG - chr8_2:38610478-38610497 Msa1246740:intron 30.0%
GCAGTCTTCATTAATTACAA+CGG + chr8_2:38610553-38610572 None:intergenic 30.0%
GACAGACAAAAAAGAAGAAA+TGG + chr8_2:38610611-38610630 None:intergenic 30.0%
AAGTTAGGATAGAAAAGGAA+GGG + chr8_2:38610884-38610903 None:intergenic 30.0%
ATTGGAAGTTAGGATAGAAA+AGG + chr8_2:38610889-38610908 None:intergenic 30.0%
!! CTTGTGCTGATAGTATTTTA+AGG - chr8_2:38610963-38610982 Msa1246740:intron 30.0%
! GAGTGTACCTGTATAAATTT+TGG - chr8_2:38610993-38611012 Msa1246740:intron 30.0%
ACTATCCTAGTTTCTCTATT+AGG - chr8_2:38611125-38611144 Msa1246740:intron 30.0%
CTATCCTAGTTTCTCTATTA+GGG - chr8_2:38611126-38611145 Msa1246740:intron 30.0%
ACAAATAAAAAAGGCAATGG+AGG + chr8_2:38611279-38611298 None:intergenic 30.0%
CCTACAAATAAAAAAGGCAA+TGG + chr8_2:38611282-38611301 None:intergenic 30.0%
!!! CCATTGCCTTTTTTATTTGT+AGG - chr8_2:38611279-38611298 Msa1246740:intron 30.0%
ACAGTGCCTACAAATAAAAA+AGG + chr8_2:38611288-38611307 None:intergenic 30.0%
ATAATAACAGATAGTGTTGC+AGG + chr8_2:38611337-38611356 None:intergenic 30.0%
CATGAAGCAAGATTATGATA+CGG - chr8_2:38611516-38611535 Msa1246740:intron 30.0%
ATGAAGCAAGATTATGATAC+GGG - chr8_2:38611517-38611536 Msa1246740:intron 30.0%
!! TGCACTATTTTTCTGATACA+TGG - chr8_2:38611684-38611703 Msa1246740:intron 30.0%
AAAGGCTACTCATAATTGCT+GGG - chr8_2:38607734-38607753 Msa1246740:CDS 35.0%
TCATAATTGCTGGGCTTATA+AGG - chr8_2:38607743-38607762 Msa1246740:CDS 35.0%
CCATGAAAAACACCATAAGT+TGG + chr8_2:38608004-38608023 None:intergenic 35.0%
! CCAACTTATGGTGTTTTTCA+TGG - chr8_2:38608001-38608020 Msa1246740:intron 35.0%
! TAGTGATTTGGCATTGAAAC+GGG + chr8_2:38608029-38608048 None:intergenic 35.0%
AATTGCATGTAGAATTAGGG+AGG - chr8_2:38608055-38608074 Msa1246740:intron 35.0%
ATTGCATGTAGAATTAGGGA+GGG - chr8_2:38608056-38608075 Msa1246740:intron 35.0%
CCACACACTATACTCATATT+TGG + chr8_2:38608174-38608193 None:intergenic 35.0%
CCAAATATGAGTATAGTGTG+TGG - chr8_2:38608171-38608190 Msa1246740:intron 35.0%
GAATGTTAAGGGAAAGGAAA+TGG - chr8_2:38608364-38608383 Msa1246740:intron 35.0%
!! ATGAAGTTGGTAATTCGTAG+TGG - chr8_2:38608418-38608437 Msa1246740:intron 35.0%
GTGGAATGCATCTAAGTAAT+TGG - chr8_2:38608564-38608583 Msa1246740:intron 35.0%
ACAGTGTTGTGTTCTTGATA+AGG - chr8_2:38608754-38608773 Msa1246740:intron 35.0%
!! TGTCTTGGTGTTAATATGAC+GGG - chr8_2:38608876-38608895 Msa1246740:intron 35.0%
! TCATTTTCTGTTGAATTGCG+GGG - chr8_2:38609082-38609101 Msa1246740:intron 35.0%
!!! TATGTTGTCTGTGCTTTTTC+TGG - chr8_2:38609136-38609155 Msa1246740:CDS 35.0%
TTACTTATCGAATCATAGCC+TGG - chr8_2:38609332-38609351 Msa1246740:intron 35.0%
!! ATAGCCTGGCTTTAACTTTA+AGG - chr8_2:38609346-38609365 Msa1246740:intron 35.0%
!! AATTTCTGGTAAAGGACAGT+AGG + chr8_2:38609567-38609586 None:intergenic 35.0%
! TTTTAGTCTCAGACTCACAA+GGG - chr8_2:38609588-38609607 Msa1246740:intron 35.0%
! ATTGGATTGGAACATAGAAG+AGG - chr8_2:38609641-38609660 Msa1246740:intron 35.0%
TTATCTTTCGTTCAACAGGT+AGG - chr8_2:38609745-38609764 Msa1246740:intron 35.0%
TATCTTTCGTTCAACAGGTA+GGG - chr8_2:38609746-38609765 Msa1246740:intron 35.0%
! TATTCTGCCATTTCTACTTC+AGG - chr8_2:38609826-38609845 Msa1246740:intron 35.0%
AGGAATAGATAGAGTAATGG+TGG - chr8_2:38609846-38609865 Msa1246740:intron 35.0%
!! TTTGTTTTCACAAGGCAAGT+TGG + chr8_2:38610202-38610221 None:intergenic 35.0%
AACTTGCCTTGTGAAAACAA+AGG - chr8_2:38610201-38610220 Msa1246740:intron 35.0%
!!! TAACCACCTTTGTTTTCACA+AGG + chr8_2:38610210-38610229 None:intergenic 35.0%
GATCATTCAAGTGAAACTCT+AGG + chr8_2:38610280-38610299 None:intergenic 35.0%
GAGTTTCACTTGAATGATCT+TGG - chr8_2:38610281-38610300 Msa1246740:intron 35.0%
AGTACTCCAAGTAAGTCAAA+GGG + chr8_2:38610382-38610401 None:intergenic 35.0%
ATATGCAAGAACAAACCTGA+TGG + chr8_2:38610408-38610427 None:intergenic 35.0%
ATCCTTCTTATAGTATGACC+TGG - chr8_2:38610456-38610475 Msa1246740:intron 35.0%
TCCTTCTTATAGTATGACCT+GGG - chr8_2:38610457-38610476 Msa1246740:intron 35.0%
!!! TCTTTTTTGTCTGTCTTGTC+TGG - chr8_2:38610616-38610635 Msa1246740:intron 35.0%
! GTTGTTGACTATTGCTCATT+AGG - chr8_2:38610644-38610663 Msa1246740:intron 35.0%
TGCTCATTAGGATTTGAAAG+AGG - chr8_2:38610656-38610675 Msa1246740:intron 35.0%
AGGATTTGAAAGAGGACTTT+AGG - chr8_2:38610664-38610683 Msa1246740:intron 35.0%
TGATGAACTGTTCTCTTGAT+TGG - chr8_2:38610713-38610732 Msa1246740:intron 35.0%
GAAGTTAGGATAGAAAAGGA+AGG + chr8_2:38610885-38610904 None:intergenic 35.0%
!! GTGCTGATAGTATTTTAAGG+CGG - chr8_2:38610966-38610985 Msa1246740:intron 35.0%
!!! GATAGTATTTTAAGGCGGTA+AGG - chr8_2:38610971-38610990 Msa1246740:intron 35.0%
TTACCAGTGTTGTCAAATAG+CGG - chr8_2:38611050-38611069 Msa1246740:intron 35.0%
ATAGTGTTGCAGGATAATTG+TGG + chr8_2:38611327-38611346 None:intergenic 35.0%
CTTCAATTCTCTGCTACAAT+TGG + chr8_2:38611617-38611636 None:intergenic 35.0%
TGCAACTTCTTTCTGATACA+TGG - chr8_2:38611711-38611730 Msa1246740:CDS 35.0%
! TGAAGATGTGATGATGAATG+TGG - chr8_2:38611750-38611769 Msa1246740:CDS 35.0%
! TAGTTTTCTGATATGAGACC+TGG - chr8_2:38611827-38611846 Msa1246740:CDS 35.0%
!! AATTTTTGAAAGCCATGGTG+TGG + chr8_2:38611854-38611873 None:intergenic 35.0%
!! TGGTGATGGTGATGATGAAT+GGG + chr8_2:38607420-38607439 None:intergenic 40.0%
TGAATTGTTACTACTGCTGC+TGG + chr8_2:38607499-38607518 None:intergenic 40.0%
AGCAGCAGTAGTAACAATTC+AGG - chr8_2:38607498-38607517 Msa1246740:three_prime_UTR 40.0%
AACCTGAGAAAGGAAAGACA+TGG + chr8_2:38607622-38607641 None:intergenic 40.0%
CAGCAATTATGAGTAGCCTT+TGG + chr8_2:38607735-38607754 None:intergenic 40.0%
CAAAGGCTACTCATAATTGC+TGG - chr8_2:38607733-38607752 Msa1246740:CDS 40.0%
TCTCAGATTATTACCGGTGT+CGG + chr8_2:38607863-38607882 None:intergenic 40.0%
GTGTTGCACACTAACATATG+TGG - chr8_2:38607914-38607933 Msa1246740:intron 40.0%
AGCTACTGTGTATGTGTTAG+AGG - chr8_2:38608141-38608160 Msa1246740:intron 40.0%
GTATGACTCAAGAAATGCTC+TGG - chr8_2:38608207-38608226 Msa1246740:intron 40.0%
TCTGGCATGGGTGAATAAAT+TGG - chr8_2:38608225-38608244 Msa1246740:intron 40.0%
! TTGCTGGTGCAATTCTCTTT+TGG - chr8_2:38608311-38608330 Msa1246740:intron 40.0%
GTTGGATGAATTTATGGGAG+TGG - chr8_2:38608533-38608552 Msa1246740:intron 40.0%
GCAAATAGTTTAGCGTTTGG+TGG - chr8_2:38608639-38608658 Msa1246740:intron 40.0%
!! TGATAAGGTATTGGTGTGTG+AGG - chr8_2:38608769-38608788 Msa1246740:intron 40.0%
!! GATAAGGTATTGGTGTGTGA+GGG - chr8_2:38608770-38608789 Msa1246740:intron 40.0%
ATAAAGGGAGCAACATCACA+AGG + chr8_2:38608856-38608875 None:intergenic 40.0%
TGTTGCTCCCTTTATTGTCT+TGG - chr8_2:38608861-38608880 Msa1246740:intron 40.0%
!! GTCTTGGTGTTAATATGACG+GGG - chr8_2:38608877-38608896 Msa1246740:intron 40.0%
AACTGCATATGTGCCCTTTA+TGG - chr8_2:38608946-38608965 Msa1246740:CDS 40.0%
GCTCATGAAGACTCCATAAA+GGG + chr8_2:38608962-38608981 None:intergenic 40.0%
TATGCTGGGTGATATCCTAT+GGG - chr8_2:38609004-38609023 Msa1246740:intron 40.0%
CTGTCCTTAAAGTTAAAGCC+AGG + chr8_2:38609353-38609372 None:intergenic 40.0%
! CTTTTAGTCTCAGACTCACA+AGG - chr8_2:38609587-38609606 Msa1246740:intron 40.0%
ATCTTTCGTTCAACAGGTAG+GGG - chr8_2:38609747-38609766 Msa1246740:intron 40.0%
AACAGGTAGGGGATCAATAT+CGG - chr8_2:38609758-38609777 Msa1246740:intron 40.0%
CAATATCGGTCCAATGATGA+TGG - chr8_2:38609772-38609791 Msa1246740:intron 40.0%
TGAAGGTTCACCATCATCAT+TGG + chr8_2:38609785-38609804 None:intergenic 40.0%
!! AATGATGATGGTGAACCTTC+AGG - chr8_2:38609784-38609803 Msa1246740:intron 40.0%
!! TACAGCCGCTATTTTGTCAA+TGG + chr8_2:38609994-38610013 None:intergenic 40.0%
TTGCCTTGTGAAAACAAAGG+TGG - chr8_2:38610204-38610223 Msa1246740:intron 40.0%
CTTAGCCTGTAATGCATCTT+TGG - chr8_2:38610234-38610253 Msa1246740:intron 40.0%
TGCAAAATGTAGGTGCCAAT+GGG - chr8_2:38610346-38610365 Msa1246740:intron 40.0%
! GAAGTTCCCTTTGACTTACT+TGG - chr8_2:38610373-38610392 Msa1246740:intron 40.0%
GAGTACTCCAAGTAAGTCAA+AGG + chr8_2:38610383-38610402 None:intergenic 40.0%
ACCCAGGTCATACTATAAGA+AGG + chr8_2:38610461-38610480 None:intergenic 40.0%
TCTTATAGTATGACCTGGGT+AGG - chr8_2:38610461-38610480 Msa1246740:intron 40.0%
! TTGAAAGAGGACTTTAGGAG+TGG - chr8_2:38610669-38610688 Msa1246740:intron 40.0%
CAAAATCTACAGGCATGCAT+TGG + chr8_2:38610907-38610926 None:intergenic 40.0%
ATTTCACCGGCAAAATCTAC+AGG + chr8_2:38610917-38610936 None:intergenic 40.0%
TTGTCAAATAGCGGTGATAG+TGG - chr8_2:38611059-38611078 Msa1246740:intron 40.0%
TGAATCCACTATGGAAACCA+CGG - chr8_2:38611101-38611120 Msa1246740:intron 40.0%
TACATCAGCTAGAAAAACCC+CGG + chr8_2:38611160-38611179 None:intergenic 40.0%
GTTAAAGCAAGAGATTCGAG+CGG + chr8_2:38611405-38611424 None:intergenic 40.0%
GGGTAAAGATGACATATCCA+TGG - chr8_2:38611537-38611556 Msa1246740:intron 40.0%
! TTTTGACCGAGCTGAGAAAT+TGG - chr8_2:38611576-38611595 Msa1246740:intron 40.0%
TATCCTCCAATTTCTCAGCT+CGG + chr8_2:38611585-38611604 None:intergenic 40.0%
GATACATGGTAGATGCAACT+TGG - chr8_2:38611698-38611717 Msa1246740:CDS 40.0%
GAGATGTTGAGAGATGCTTG+TGG - chr8_2:38607383-38607402 Msa1246740:three_prime_UTR 45.0%
!! GTGGTGATGGTGATGATGAA+TGG + chr8_2:38607421-38607440 None:intergenic 45.0%
AGAGTGAAGCGTAGATTCGA+TGG + chr8_2:38607443-38607462 None:intergenic 45.0%
!! AGACATGGCGGATTTGTCAT+CGG + chr8_2:38607607-38607626 None:intergenic 45.0%
CTGAGAAAGGAAAGACATGG+CGG + chr8_2:38607619-38607638 None:intergenic 45.0%
GGAGGTAAGTAACCTGAGAA+AGG + chr8_2:38607632-38607651 None:intergenic 45.0%
TTGTTAGGTTCGGGATCCAA+AGG - chr8_2:38607716-38607735 Msa1246740:CDS 45.0%
TGTTGTTCGAGGCCAACTTA+TGG - chr8_2:38607989-38608008 Msa1246740:intron 45.0%
ACTCAAGAAATGCTCTGGCA+TGG - chr8_2:38608212-38608231 Msa1246740:intron 45.0%
CTCAAGAAATGCTCTGGCAT+GGG - chr8_2:38608213-38608232 Msa1246740:intron 45.0%
! TTGGTAATTCGTAGTGGCAG+TGG - chr8_2:38608424-38608443 Msa1246740:intron 45.0%
GTGGCAGTGGCATGTATTTA+TGG - chr8_2:38608437-38608456 Msa1246740:intron 45.0%
GGATGAATTTATGGGAGTGG+AGG - chr8_2:38608536-38608555 Msa1246740:intron 45.0%
TTGCATAACACAATGCCCAC+AGG + chr8_2:38608623-38608642 None:intergenic 45.0%
AGGACATTACTACCAGCACA+TGG + chr8_2:38608836-38608855 None:intergenic 45.0%
CGGGGAATGAAGATCTTGTA+CGG - chr8_2:38608895-38608914 Msa1246740:intron 45.0%
CGCTCATGAAGACTCCATAA+AGG + chr8_2:38608963-38608982 None:intergenic 45.0%
TCATGAGCGATTGTTTGCCA+AGG - chr8_2:38608974-38608993 Msa1246740:intron 45.0%
! TGCCAAGGAAAAGTGTATGC+TGG - chr8_2:38608989-38609008 Msa1246740:intron 45.0%
! GCCAAGGAAAAGTGTATGCT+GGG - chr8_2:38608990-38609009 Msa1246740:intron 45.0%
! ACCCAGCATACACTTTTCCT+TGG + chr8_2:38608994-38609013 None:intergenic 45.0%
GTATGCTGGGTGATATCCTA+TGG - chr8_2:38609003-38609022 Msa1246740:intron 45.0%
CCTTCTGTGAAGAGTTTCAC+AGG + chr8_2:38609259-38609278 None:intergenic 45.0%
CCTGTGAAACTCTTCACAGA+AGG - chr8_2:38609256-38609275 Msa1246740:intron 45.0%
!! AGAGAGTGGACTAATGATGC+TGG - chr8_2:38609284-38609303 Msa1246740:intron 45.0%
!! GAGAGTGGACTAATGATGCT+GGG - chr8_2:38609285-38609304 Msa1246740:intron 45.0%
GGACAGTAGGACACTATTAG+AGG + chr8_2:38609554-38609573 None:intergenic 45.0%
!! ACAAGGGTATCTTCACCAGT+TGG - chr8_2:38609604-38609623 Msa1246740:intron 45.0%
! TGATGGTGAACCTTCAGGTA+CGG - chr8_2:38609789-38609808 Msa1246740:intron 45.0%
GAGTAATGGTGGTTGTGATC+AGG - chr8_2:38609857-38609876 Msa1246740:intron 45.0%
GGTGGAATCAAATTAGGCAC+TGG - chr8_2:38610124-38610143 Msa1246740:intron 45.0%
!! GGAATCAAATTAGGCACTGG+AGG - chr8_2:38610127-38610146 Msa1246740:intron 45.0%
GTGCAAAATGTAGGTGCCAA+TGG - chr8_2:38610345-38610364 Msa1246740:intron 45.0%
! ACTTGGAGTACTCTACCATC+AGG - chr8_2:38610390-38610409 Msa1246740:intron 45.0%
! AAGAGGACTTTAGGAGTGGA+AGG - chr8_2:38610673-38610692 Msa1246740:intron 45.0%
! AGAGGACTTTAGGAGTGGAA+GGG - chr8_2:38610674-38610693 Msa1246740:intron 45.0%
AGTGGAAGGGAGAAAAGAGA+GGG - chr8_2:38610687-38610706 Msa1246740:intron 45.0%
GGAAGCAAAGGAAAGAGGAA+GGG + chr8_2:38610858-38610877 None:intergenic 45.0%
TGGAAGCAAAGGAAAGAGGA+AGG + chr8_2:38610859-38610878 None:intergenic 45.0%
AGGATAGAAAAGGAAGGGAG+TGG + chr8_2:38610879-38610898 None:intergenic 45.0%
ACAGGCATGCATTGGAAGTT+AGG + chr8_2:38610899-38610918 None:intergenic 45.0%
! TGCATGCCTGTAGATTTTGC+CGG - chr8_2:38610908-38610927 Msa1246740:intron 45.0%
TCACCGCTATTTGACAACAC+TGG + chr8_2:38611056-38611075 None:intergenic 45.0%
TAGTACCGTGGTTTCCATAG+TGG + chr8_2:38611109-38611128 None:intergenic 45.0%
GAGAAACTAGGATAGTACCG+TGG + chr8_2:38611121-38611140 None:intergenic 45.0%
GTGGCCCTAATAGAGAAACT+AGG + chr8_2:38611133-38611152 None:intergenic 45.0%
!! AAATAATAATAATAGAAAAT+GGG + chr8_2:38607653-38607672 None:intergenic 5.0%
!! AAAATAATAATAATAGAAAA+TGG + chr8_2:38607654-38607673 None:intergenic 5.0%
!! ATGAAAAATATAATTTAAAT+CGG + chr8_2:38611665-38611684 None:intergenic 5.0%
! CGTAGATTCGATGGTGGTGA+TGG + chr8_2:38607434-38607453 None:intergenic 50.0%
GTGAAGCGTAGATTCGATGG+TGG + chr8_2:38607440-38607459 None:intergenic 50.0%
! CATGGTGGTGAACTTGGCTA+TGG + chr8_2:38607469-38607488 None:intergenic 50.0%
CATAGCCAAGTTCACCACCA+TGG - chr8_2:38607467-38607486 Msa1246740:three_prime_UTR 50.0%
AGCAAGTTCATCGCCATTGC+TGG - chr8_2:38607573-38607592 Msa1246740:three_prime_UTR 50.0%
CGCCATGTCTTTCCTTTCTC+AGG - chr8_2:38607617-38607636 Msa1246740:intron 50.0%
!! TGAAGCACTGATGCAGACAC+CGG - chr8_2:38607823-38607842 Msa1246740:intron 50.0%
TAGACTCTATGGCCATGTGC+TGG - chr8_2:38608821-38608840 Msa1246740:intron 50.0%
CTTCCTCCACACTCTGGTTA+TGG + chr8_2:38608921-38608940 None:intergenic 50.0%
ACCAGAGTGTGGAGGAAGTA+AGG - chr8_2:38608923-38608942 Msa1246740:CDS 50.0%
TCCTTACTTCCTCCACACTC+TGG + chr8_2:38608927-38608946 None:intergenic 50.0%
! TCCTATGGGCATGAAGCACT+TGG - chr8_2:38609018-38609037 Msa1246740:intron 50.0%
! CCTATGGGCATGAAGCACTT+GGG - chr8_2:38609019-38609038 Msa1246740:intron 50.0%
! CTATGGGCATGAAGCACTTG+GGG - chr8_2:38609020-38609039 Msa1246740:intron 50.0%
!! TAGGCACTGGAGGATTAGTC+AGG - chr8_2:38610137-38610156 Msa1246740:intron 50.0%
!! AGGCACTGGAGGATTAGTCA+GGG - chr8_2:38610138-38610157 Msa1246740:intron 50.0%
!! GGAGGATTAGTCAGGGCTTA+TGG - chr8_2:38610145-38610164 Msa1246740:intron 50.0%
!! GGATTAGTCAGGGCTTATGG+AGG - chr8_2:38610148-38610167 Msa1246740:intron 50.0%
AATGTAGGTGCCAATGGGTG+TGG - chr8_2:38610351-38610370 Msa1246740:intron 50.0%
AAGGGAACTTCCACACCCAT+TGG + chr8_2:38610364-38610383 None:intergenic 50.0%
GAGTGGAAGGGAGAAAAGAG+AGG - chr8_2:38610686-38610705 Msa1246740:intron 50.0%
GGAGTGGAAGCAAAGGAAAG+AGG + chr8_2:38610863-38610882 None:intergenic 50.0%
AAGGAAGGGAGTGGAAGCAA+AGG + chr8_2:38610870-38610889 None:intergenic 50.0%
! TAGGCACTGTTTGCGCTATG+TGG - chr8_2:38611298-38611317 Msa1246740:intron 50.0%
TGACCGAGCTGAGAAATTGG+AGG - chr8_2:38611579-38611598 Msa1246740:intron 50.0%
ATGATGAATGTGGCACACGC+AGG - chr8_2:38611760-38611779 Msa1246740:CDS 50.0%
AGTCCTATTAGCAGCACCCA+AGG + chr8_2:38611808-38611827 None:intergenic 50.0%
GTTACTACTGCTGCTGGTGC+TGG + chr8_2:38607493-38607512 None:intergenic 55.0%
! GGCGGATTTGTCATCGGAGA+CGG + chr8_2:38607601-38607620 None:intergenic 55.0%
!! ATGGCGTGGCATTGATGACG+AGG - chr8_2:38608108-38608127 Msa1246740:intron 55.0%
TATGGGAGTGGAGGTTGACG+TGG - chr8_2:38608545-38608564 Msa1246740:intron 55.0%
GTACGGCCATAACCAGAGTG+TGG - chr8_2:38608912-38608931 Msa1246740:intron 55.0%
CCCAAGTGCTTCATGCCCAT+AGG + chr8_2:38609022-38609041 None:intergenic 55.0%
!! CACAGAAGGTGCTGAGAGAG+TGG - chr8_2:38609270-38609289 Msa1246740:intron 55.0%
! GGTTTTCCAGCCGTACCTGA+AGG + chr8_2:38609802-38609821 None:intergenic 55.0%
AGCGGCTGTATGTGTGCTTG+TGG - chr8_2:38610004-38610023 Msa1246740:intron 55.0%
CTCTATTAGGGCCACAGTGC+CGG - chr8_2:38611138-38611157 Msa1246740:intron 55.0%
TCTATTAGGGCCACAGTGCC+GGG - chr8_2:38611139-38611158 Msa1246740:intron 55.0%
CTAGAAAAACCCCGGCACTG+TGG + chr8_2:38611152-38611171 None:intergenic 55.0%
!! TGGCCTTGGGTGCTGCTAAT+AGG - chr8_2:38611802-38611821 Msa1246740:CDS 55.0%
ATGAGACCTGGTCCACACCA+TGG - chr8_2:38611839-38611858 Msa1246740:CDS 55.0%
TGAAAGCCATGGTGTGGACC+AGG + chr8_2:38611848-38611867 None:intergenic 55.0%
! GCTGGCCATGGTGGTGAACT+TGG + chr8_2:38607475-38607494 None:intergenic 60.0%
ATCGGAGACGGAGCCAGCAA+TGG + chr8_2:38607589-38607608 None:intergenic 60.0%
GCAGACACCGGACACAAGAG+TGG - chr8_2:38607835-38607854 Msa1246740:intron 60.0%
!! GTCGGTGCCACTCTTGTGTC+CGG + chr8_2:38607845-38607864 None:intergenic 60.0%
!! CACAAGAGTGGCACCGACAC+CGG - chr8_2:38607847-38607866 Msa1246740:intron 60.0%
CGGCCATAACCAGAGTGTGG+AGG - chr8_2:38608915-38608934 Msa1246740:intron 60.0%
! TGGGCATGAAGCACTTGGGG+TGG - chr8_2:38609023-38609042 Msa1246740:intron 60.0%
GGTGAACCTTCAGGTACGGC+TGG - chr8_2:38609793-38609812 Msa1246740:intron 60.0%
CTATTAGGGCCACAGTGCCG+GGG - chr8_2:38611140-38611159 Msa1246740:intron 60.0%
!! ACTGCTGCTGGTGCTGGCCA+TGG + chr8_2:38607487-38607506 None:intergenic 65.0%
!! GCTGCTGGTGCTGGCCATGG+TGG + chr8_2:38607484-38607503 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 38607371 38611959 38607371 ID=Msa1246740;Name=Msa1246740
chr8_2 mRNA 38607371 38611959 38607371 ID=Msa1246740-mRNA-1;Parent=Msa1246740;Name=Msa1246740-mRNA-1;_AED=0.29;_eAED=0.29;_QI=25|0.8|1|1|0.8|0.66|6|281|225
chr8_2 exon 38607371 38607597 38607371 ID=Msa1246740-mRNA-1:exon:12026;Parent=Msa1246740-mRNA-1
chr8_2 exon 38607625 38607837 38607625 ID=Msa1246740-mRNA-1:exon:12025;Parent=Msa1246740-mRNA-1
chr8_2 exon 38608919 38608972 38608919 ID=Msa1246740-mRNA-1:exon:12024;Parent=Msa1246740-mRNA-1
chr8_2 exon 38609108 38609213 38609108 ID=Msa1246740-mRNA-1:exon:12023;Parent=Msa1246740-mRNA-1
chr8_2 exon 38609452 38609567 38609452 ID=Msa1246740-mRNA-1:exon:12022;Parent=Msa1246740-mRNA-1
chr8_2 exon 38611692 38611959 38611692 ID=Msa1246740-mRNA-1:exon:12021;Parent=Msa1246740-mRNA-1
chr8_2 five_prime_UTR 38611935 38611959 38611935 ID=Msa1246740-mRNA-1:five_prime_utr;Parent=Msa1246740-mRNA-1
chr8_2 CDS 38611692 38611934 38611692 ID=Msa1246740-mRNA-1:cds;Parent=Msa1246740-mRNA-1
chr8_2 CDS 38609452 38609567 38609452 ID=Msa1246740-mRNA-1:cds;Parent=Msa1246740-mRNA-1
chr8_2 CDS 38609108 38609213 38609108 ID=Msa1246740-mRNA-1:cds;Parent=Msa1246740-mRNA-1
chr8_2 CDS 38608919 38608972 38608919 ID=Msa1246740-mRNA-1:cds;Parent=Msa1246740-mRNA-1
chr8_2 CDS 38607679 38607837 38607679 ID=Msa1246740-mRNA-1:cds;Parent=Msa1246740-mRNA-1
chr8_2 three_prime_UTR 38607625 38607678 38607625 ID=Msa1246740-mRNA-1:three_prime_utr;Parent=Msa1246740-mRNA-1
chr8_2 three_prime_UTR 38607371 38607597 38607371 ID=Msa1246740-mRNA-1:three_prime_utr;Parent=Msa1246740-mRNA-1
Gene Sequence

>Msa1246740

ATGCTTGTGGCAGCAACGATACCCATTCATCATCACCATCACCACCATCGAATCTACGCTTCACTCTTCGCCATAGCCAAGTTCACCACCATGGCCAGCACCAGCAGCAGTAGTAACAATTCAGGTGCATTCACAACAATCAAAGAAAGAGTCACTTTCGAGAAAGATATAAAGAAAAGCAAGTTCATCGCCATTGCTGGCTCCGTCTCCGATGACAAATCCGCCATGTCTTTCCTTTCTCAGGTAGGGGATCAATATCGGTCCAATGATGATGGTGAACCTTCAGGTACGGCTGGAAAACCAATATATTCTGCCATTTCTACTTCAGGAATAGATAGAGTAATGGTGGTTGTGATCAGGTATTTTGGTGGAATCAAATTAGGCACTGGAGGATTAGTCAGGGCTTATGGAGGAGTTGCATCAGAATGTTTGAAGAATGCTCCAACTTGCCTTGTGAAAACAAAGGTGCCAATGGGTGTGGAAGTTCCCTTTGACTTACTTGGAGTACTCTACCATCAGCTGCAGTCTTTTAATGTCGAAGACATGAAGCAAGATTATGATACGGGTAAAGATGACATATCCATGGTTACTTTTAAAGTTGATTTTGACCGAGCTGAGAAATTGGAGGATACACTGAAAACCAATTGTAGCAGAGAATTGAAGTTTTATAAGCATTGA

Protein sequence

>Msa1246740

MLVAATIPIHHHHHHHRIYASLFAIAKFTTMASTSSSSNNSGAFTTIKERVTFEKDIKKSKFIAIAGSVSDDKSAMSFLSQVGDQYRSNDDGEPSGTAGKPIYSAISTSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKNAPTCLVKTKVPMGVEVPFDLLGVLYHQLQSFNVEDMKQDYDTGKDDISMVTFKVDFDRAEKLEDTLKTNCSRELKFYKH*