Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464590 | XP_013460909.1 | 90.632 | 886 | 56 | 2 | 1 | 860 | 1 | 885 | 0.0 | 1575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464590 | sp|Q9LME6|MBD8_ARATH | 38.012 | 171 | 88 | 4 | 122 | 281 | 226 | 389 | 1.32e-23 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464590 | A0A072V0Q2 | 90.632 | 886 | 56 | 2 | 1 | 860 | 1 | 885 | 0.0 | 1575 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029630 | Msa0464590 | 0.803527 | 3.340620e-49 | -8.615850e-47 |
| Msa0074750 | Msa0464590 | 0.801670 | 8.071708e-49 | -8.615850e-47 |
| Msa0079920 | Msa0464590 | 0.814745 | 1.317580e-51 | -8.615850e-47 |
| Msa0116080 | Msa0464590 | 0.810098 | 1.364798e-50 | -8.615850e-47 |
| Msa0125450 | Msa0464590 | 0.808104 | 3.648567e-50 | -8.615850e-47 |
| Msa0125540 | Msa0464590 | 0.803541 | 3.318596e-49 | -8.615850e-47 |
| Msa0230680 | Msa0464590 | 0.806950 | 6.411462e-50 | -8.615850e-47 |
| Msa0237200 | Msa0464590 | 0.804361 | 2.241473e-49 | -8.615850e-47 |
| Msa0464550 | Msa0464590 | 0.890454 | 9.713273e-74 | -8.615850e-47 |
| Msa0464590 | Msa0480780 | 0.800600 | 1.335541e-48 | -8.615850e-47 |
| Msa0464590 | Msa0483280 | 0.813836 | 2.092199e-51 | -8.615850e-47 |
| Msa0464590 | Msa0486130 | 0.802835 | 4.646974e-49 | -8.615850e-47 |
| Msa0464590 | Msa0491000 | 0.802023 | 6.827924e-49 | -8.615850e-47 |
| Msa0464590 | Msa0623990 | 0.807032 | 6.160812e-50 | -8.615850e-47 |
| Msa0464590 | Msa0624060 | 0.810890 | 9.203984e-51 | -8.615850e-47 |
| Msa0464590 | Msa0652690 | 0.802884 | 4.539674e-49 | -8.615850e-47 |
| Msa0464590 | Msa0676130 | 0.814422 | 1.553587e-51 | -8.615850e-47 |
| Msa0464590 | Msa0676180 | 0.810910 | 9.111990e-51 | -8.615850e-47 |
| Msa0464590 | Msa0708250 | 0.820231 | 7.649435e-53 | -8.615850e-47 |
| Msa0464590 | Msa0752700 | 0.832958 | 7.021750e-56 | -8.615850e-47 |
| Msa0464590 | Msa0766580 | 0.811309 | 7.465699e-51 | -8.615850e-47 |
| Msa0464590 | Msa0794970 | 0.846365 | 2.273630e-59 | -8.615850e-47 |
| Msa0464590 | Msa0831100 | 0.834857 | 2.350953e-56 | -8.615850e-47 |
| Msa0464590 | Msa0834750 | 0.804027 | 2.630289e-49 | -8.615850e-47 |
| Msa0464590 | Msa0945240 | 0.801772 | 7.690936e-49 | -8.615850e-47 |
| Msa0464590 | Msa1170630 | 0.841156 | 5.636810e-58 | -8.615850e-47 |
| Msa0464590 | Msa1206100 | 0.807749 | 4.341839e-50 | -8.615850e-47 |
| Msa0464590 | Msa1329550 | 0.806008 | 1.013131e-49 | -8.615850e-47 |
| Msa0464590 | Msa1356610 | 0.807662 | 4.530392e-50 | -8.615850e-47 |
| Msa0464590 | Msa1378410 | 0.809395 | 1.932757e-50 | -8.615850e-47 |
| Msa0464590 | Msa1437330 | 0.815576 | 8.611281e-52 | -8.615850e-47 |
| Msa0464590 | Msa1450720 | 0.836426 | 9.426371e-57 | -8.615850e-47 |
| Msa0274970 | Msa0464590 | 0.804542 | 2.054602e-49 | -8.615850e-47 |
| Msa0280110 | Msa0464590 | 0.808117 | 3.626104e-50 | -8.615850e-47 |
| Msa0307860 | Msa0464590 | 0.806720 | 7.172535e-50 | -8.615850e-47 |
| Msa0308440 | Msa0464590 | 0.817762 | 2.787659e-52 | -8.615850e-47 |
| Msa0315680 | Msa0464590 | 0.804600 | 1.998216e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464590 | MtrunA17_Chr3g0115871 | 90.519 | 886 | 56 | 3 | 1 | 860 | 1 | 884 | 0.0 | 1568 |
| Msa0464590 | MtrunA17_Chr2g0311311 | 84.507 | 71 | 10 | 1 | 116 | 186 | 30 | 99 | 3.15e-31 | 119 |
| Msa0464590 | MtrunA17_Chr2g0279291 | 38.951 | 267 | 128 | 11 | 56 | 311 | 51 | 293 | 1.72e-22 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464590 | AT1G22310.1 | 38.012 | 171 | 88 | 4 | 122 | 281 | 127 | 290 | 9.86e-25 | 108 |
| Msa0464590 | AT1G22310.2 | 38.012 | 171 | 88 | 4 | 122 | 281 | 226 | 389 | 1.34e-24 | 109 |
Find 249 sgRNAs with CRISPR-Local
Find 524 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGAATTTGCATCATTCT+TGG | 0.217992 | 3_3:-64649238 | None:intergenic |
| TGGAGAGTTTGGGTGGAGTT+TGG | 0.218761 | 3_3:+64645346 | Msa0464590:CDS |
| AACCGTTGCGGTTTCGTTGA+TGG | 0.231681 | 3_3:-64644651 | None:intergenic |
| TCTGGCTGCTACCGAAATTT+AGG | 0.240777 | 3_3:-64650787 | None:intergenic |
| GATTGTCTGCTGTGAAAATT+TGG | 0.243377 | 3_3:-64650405 | None:intergenic |
| CATGTTGGTGGCAATGGGCT+TGG | 0.244526 | 3_3:+64649809 | Msa0464590:CDS |
| TACATTAATAATATTTCTTT+TGG | 0.262374 | 3_3:+64650244 | Msa0464590:CDS |
| AAGAATGTTCTAAACTAAAA+TGG | 0.269999 | 3_3:-64651604 | None:intergenic |
| GACGAGAATACGTCTGTTTC+CGG | 0.285815 | 3_3:-64644853 | None:intergenic |
| AGTTCCCATTGATGATGATA+TGG | 0.291697 | 3_3:-64649085 | None:intergenic |
| CGAGGTTACTGTGCAGGTTC+TGG | 0.301449 | 3_3:+64651507 | Msa0464590:three_prime_UTR |
| AGTAATTTATTTACTGTTGC+CGG | 0.302528 | 3_3:+64650448 | Msa0464590:CDS |
| GGAGAGTTTGGGTGGAGTTT+GGG | 0.309507 | 3_3:+64645347 | Msa0464590:CDS |
| AGATGCCACATTGATATTAC+TGG | 0.322918 | 3_3:-64648894 | None:intergenic |
| AATGCTGTGACATGCATAAA+AGG | 0.325286 | 3_3:+64649710 | Msa0464590:CDS |
| TGATCTTCTCCAGGGTTATT+CGG | 0.325805 | 3_3:+64644979 | Msa0464590:CDS |
| GGAAGCGTGGGCGGCCTAGT+AGG | 0.335828 | 3_3:+64645118 | Msa0464590:CDS |
| GAAAACCACATTCAGAAAAT+AGG | 0.339339 | 3_3:+64649851 | Msa0464590:CDS |
| ATGTATGGTGATGTTCATTC+TGG | 0.342182 | 3_3:-64650102 | None:intergenic |
| ATAGTTCCTTCTTCATTTGA+AGG | 0.344117 | 3_3:-64651669 | None:intergenic |
| GTTTCTGATTTGTTGCCAAC+TGG | 0.344734 | 3_3:+64645411 | Msa0464590:CDS |
| ATTGAAGATATTTCTACTAA+TGG | 0.348604 | 3_3:+64650040 | Msa0464590:CDS |
| ATCATCAGCAATGCGAGAAT+TGG | 0.349373 | 3_3:-64644936 | None:intergenic |
| CAAGGATGTTTCTTCATACT+TGG | 0.351166 | 3_3:+64648802 | Msa0464590:CDS |
| GAAATTGGTGTTAGCTCTTA+AGG | 0.351169 | 3_3:+64649592 | Msa0464590:CDS |
| GTGGAGTTTGGGCGAGTGAT+AGG | 0.358013 | 3_3:+64645358 | Msa0464590:CDS |
| CGTATTCTCGTCTCCGTCTT+CGG | 0.362369 | 3_3:+64644864 | Msa0464590:CDS |
| GAATGATGCAAATTCAGTTC+AGG | 0.366334 | 3_3:+64649242 | Msa0464590:CDS |
| GAGTCAAACTGGCGTCCATC+AGG | 0.369343 | 3_3:-64648776 | None:intergenic |
| AGCAGCAGGGTGCTGATTCC+CGG | 0.369820 | 3_3:-64650467 | None:intergenic |
| GAAACAGGAGCAACGGGAGC+AGG | 0.374428 | 3_3:-64644911 | None:intergenic |
| GGAGCAACGGGAGCAGGAAC+CGG | 0.374779 | 3_3:-64644905 | None:intergenic |
| ATGTTGGTGGCAATGGGCTT+GGG | 0.378511 | 3_3:+64649810 | Msa0464590:CDS |
| ATATTATCAATTTCCAGTTC+AGG | 0.381002 | 3_3:+64650882 | Msa0464590:three_prime_UTR |
| CCATACATCTATACACAGTA+TGG | 0.382013 | 3_3:+64650117 | Msa0464590:CDS |
| GCACTACATCTGAATCTATC+TGG | 0.382650 | 3_3:-64650805 | None:intergenic |
| TGTGAAAATTTGGCCATTCA+TGG | 0.390114 | 3_3:-64650395 | None:intergenic |
| TCATACTTGGTTTCTTTGTC+CGG | 0.394255 | 3_3:+64648815 | Msa0464590:CDS |
| GAAAGCTGAACGCTTCTAAC+AGG | 0.394970 | 3_3:+64649540 | Msa0464590:CDS |
| GGGCATTAAACATTAAATAA+AGG | 0.401341 | 3_3:-64651795 | None:intergenic |
| ATCAATACCAGAGCCACTAT+TGG | 0.401690 | 3_3:-64649669 | None:intergenic |
| GGAAGTATATTAAACCAGTT+TGG | 0.412748 | 3_3:+64650664 | Msa0464590:CDS |
| AAGAGTCACAGTGGTTTGTT+TGG | 0.418379 | 3_3:-64644687 | None:intergenic |
| TCTGAAGAGAAAATGTTTGC+TGG | 0.418529 | 3_3:+64649902 | Msa0464590:CDS |
| ACCACCATGTCGTCATCAAT+TGG | 0.421443 | 3_3:+64649512 | Msa0464590:CDS |
| CATCCTTGTATGAGTCAAAC+TGG | 0.423546 | 3_3:-64648787 | None:intergenic |
| TGGGCCTTCCTCCACATTAG+TGG | 0.425941 | 3_3:+64649829 | Msa0464590:CDS |
| CAACGAAACCGCAACGGTTA+CGG | 0.431329 | 3_3:+64644655 | Msa0464590:CDS |
| ATGCGAGAATTGGAAGAAAC+AGG | 0.432196 | 3_3:-64644926 | None:intergenic |
| GTTGATCCTTCAAATGAAGA+AGG | 0.435063 | 3_3:+64651663 | Msa0464590:three_prime_UTR |
| TCCATTCAGAACGGTTCAAT+TGG | 0.435476 | 3_3:+64645069 | Msa0464590:intron |
| GCTAAAGGTGTCTCCGGGAC+TGG | 0.436187 | 3_3:-64645150 | None:intergenic |
| GAAAACCCATGGAGTCGGTT+TGG | 0.438091 | 3_3:-64650765 | None:intergenic |
| GGAAACCATATCATCATCAA+TGG | 0.439177 | 3_3:+64649080 | Msa0464590:CDS |
| CAGGTACATGTTGGTGGCAA+TGG | 0.440250 | 3_3:+64649803 | Msa0464590:CDS |
| AATATTATTAATGTATCCAT+TGG | 0.440376 | 3_3:-64650236 | None:intergenic |
| GGAACCGGAGCGGAAGAGTT+CGG | 0.445128 | 3_3:-64644890 | None:intergenic |
| AGTCACAGTGGTTTGTTTGG+TGG | 0.445612 | 3_3:-64644684 | None:intergenic |
| GGTGATGTTCATTCTGGGAT+GGG | 0.445675 | 3_3:-64650096 | None:intergenic |
| ATATCATCATCAATGGGAAC+TGG | 0.448165 | 3_3:+64649087 | Msa0464590:CDS |
| TCTAAGCTATCATCCTGAAC+TGG | 0.448317 | 3_3:-64650895 | None:intergenic |
| AACATAGCAGCTGGAACCTT+CGG | 0.448784 | 3_3:+64650508 | Msa0464590:CDS |
| GAATACAGAGGCGGAATTGA+AGG | 0.450108 | 3_3:+64645317 | Msa0464590:CDS |
| TCTTAGCTCTGTGGTGGGCA+TGG | 0.456873 | 3_3:+64649949 | Msa0464590:CDS |
| CCACAAGATGCATCTGTGTC+TGG | 0.458376 | 3_3:+64650274 | Msa0464590:CDS |
| GGAAATTTAAACATTTCTGA+TGG | 0.460436 | 3_3:+64649108 | Msa0464590:CDS |
| ATTTCTGATGGGAATTTGAA+TGG | 0.460885 | 3_3:+64649120 | Msa0464590:CDS |
| CCAACATCAGTTGAATGCTC+AGG | 0.461437 | 3_3:-64649198 | None:intergenic |
| TTGTCCGGTGTTCAAGACAT+AGG | 0.461493 | 3_3:+64648830 | Msa0464590:CDS |
| TGCATCTCCTACAGTCATGC+AGG | 0.462741 | 3_3:+64650615 | Msa0464590:CDS |
| CCTATCTCCAATAGTGGCTC+TGG | 0.465359 | 3_3:+64649662 | Msa0464590:CDS |
| AGTGATATTGCACGGAATCC+AGG | 0.467917 | 3_3:+64649617 | Msa0464590:CDS |
| CATGTACCTGCTCATTTCCA+TGG | 0.469551 | 3_3:-64649790 | None:intergenic |
| GAAGAAGGTGGATGCGGATA+CGG | 0.469588 | 3_3:+64645203 | Msa0464590:CDS |
| CCTGAGCATTCAACTGATGT+TGG | 0.471526 | 3_3:+64649198 | Msa0464590:CDS |
| CCAGAGCCACTATTGGAGAT+AGG | 0.471836 | 3_3:-64649662 | None:intergenic |
| TTGGAAGAAACAGGAGCAAC+GGG | 0.472609 | 3_3:-64644917 | None:intergenic |
| TGGTGATGTTCATTCTGGGA+TGG | 0.475002 | 3_3:-64650097 | None:intergenic |
| ACGGAATCCAGGCATTCCTT+TGG | 0.476495 | 3_3:+64649628 | Msa0464590:CDS |
| TGCTTATAGTGCAGAGGAGA+GGG | 0.478395 | 3_3:+64645445 | Msa0464590:CDS |
| CCAATTTCCGATCAAAAGTC+AGG | 0.478780 | 3_3:-64649577 | None:intergenic |
| GAGGATTATTGATCTTCTCC+AGG | 0.479141 | 3_3:+64644970 | Msa0464590:CDS |
| GTTTCAAAATAAAACATGTA+TGG | 0.482100 | 3_3:+64650838 | Msa0464590:three_prime_UTR |
| ATCCCATGTTCTCTCATCAA+TGG | 0.483210 | 3_3:-64650212 | None:intergenic |
| CAGATGGCTAAAGGTGTCTC+CGG | 0.485181 | 3_3:-64645156 | None:intergenic |
| CTGAGCATTCAACTGATGTT+GGG | 0.485283 | 3_3:+64649199 | Msa0464590:CDS |
| TGGTTTGTCGCCGTTACTCA+AGG | 0.485367 | 3_3:+64645481 | Msa0464590:CDS |
| CTAAGAAGATGTATATCCTC+TGG | 0.485760 | 3_3:-64649932 | None:intergenic |
| AGGTTCTGAAAGCAGCATAC+TGG | 0.486094 | 3_3:+64649871 | Msa0464590:CDS |
| AATGTTGCTCACGTTCCTAC+AGG | 0.486552 | 3_3:+64649012 | Msa0464590:CDS |
| AATTCCCGAGGTTACTGTGC+AGG | 0.486650 | 3_3:+64651501 | Msa0464590:three_prime_UTR |
| CTCGCAACTTCATCTGTTGG+AGG | 0.489345 | 3_3:-64650349 | None:intergenic |
| ATACGTCTGTTTCCGGCTAC+CGG | 0.489980 | 3_3:-64644846 | None:intergenic |
| GGTGGATGCGGATACGGAAA+TGG | 0.492231 | 3_3:+64645209 | Msa0464590:CDS |
| CTAAACTAAAATGGACCTAA+AGG | 0.493187 | 3_3:-64651595 | None:intergenic |
| GTGAAATCCAAAGGAATGCC+TGG | 0.493303 | 3_3:-64649635 | None:intergenic |
| AATGATGCAAATTCAGTTCA+GGG | 0.494049 | 3_3:+64649243 | Msa0464590:CDS |
| TGCCTATGCAAGTTCTCATC+AGG | 0.494776 | 3_3:+64649481 | Msa0464590:CDS |
| CTTCTCGCAACTTCATCTGT+TGG | 0.495019 | 3_3:-64650352 | None:intergenic |
| CAGAAAAGCAGTTCCATGAA+TGG | 0.495500 | 3_3:+64650382 | Msa0464590:CDS |
| GATAGTCAGGATAAAAGTAC+AGG | 0.495780 | 3_3:+64649749 | Msa0464590:CDS |
| AGGTACATGTTGGTGGCAAT+GGG | 0.496288 | 3_3:+64649804 | Msa0464590:CDS |
| CAGCCATTGATGAGAGAACA+TGG | 0.496946 | 3_3:+64650209 | Msa0464590:CDS |
| TGGAGTCAAGTCAGAGGAAG+CGG | 0.499614 | 3_3:+64645097 | Msa0464590:CDS |
| ATTCAGAACGGTTCAATTGG+TGG | 0.500693 | 3_3:+64645072 | Msa0464590:intron |
| GAAGCGTGGGCGGCCTAGTA+GGG | 0.502991 | 3_3:+64645119 | Msa0464590:CDS |
| TCTGAGCTCTGGCAAGAAGC+AGG | 0.503242 | 3_3:-64651542 | None:intergenic |
| ATATCATCATGAAAAGCAGC+AGG | 0.504060 | 3_3:-64650481 | None:intergenic |
| TAGGGACGTGACTCCAGTCC+CGG | 0.504870 | 3_3:+64645137 | Msa0464590:CDS |
| TTGATTCCATCCAGCCCTGA+TGG | 0.506562 | 3_3:+64648761 | Msa0464590:intron |
| GTAATTTATTTACTGTTGCC+GGG | 0.507338 | 3_3:+64650449 | Msa0464590:CDS |
| TTTATCAACTCCTCCACAAA+CGG | 0.507548 | 3_3:-64645279 | None:intergenic |
| TGGTTGCATGAAACCTCAGC+TGG | 0.509244 | 3_3:+64650552 | Msa0464590:CDS |
| TCAATGAGAGTGCCGGTAGC+CGG | 0.509943 | 3_3:+64644834 | Msa0464590:CDS |
| ACCGGCACTCTCATTGAAAA+CGG | 0.510607 | 3_3:-64644828 | None:intergenic |
| ATATTATTAATGTATCCATT+GGG | 0.511743 | 3_3:-64650235 | None:intergenic |
| GATATGAATAACATAGCAGC+TGG | 0.512399 | 3_3:+64650499 | Msa0464590:CDS |
| TCAGGATGATAGCTTAGAAA+AGG | 0.513770 | 3_3:+64650900 | Msa0464590:three_prime_UTR |
| GAACTTCAGTTTAGTTCTGA+AGG | 0.513779 | 3_3:+64650064 | Msa0464590:CDS |
| ACTGGAGTCACGTCCCTACT+AGG | 0.514302 | 3_3:-64645132 | None:intergenic |
| GGTTACTGCTGAGGAGAAGA+AGG | 0.515156 | 3_3:+64645230 | Msa0464590:CDS |
| AAAAGACGGAGATCAAGAAA+CGG | 0.516010 | 3_3:-64644710 | None:intergenic |
| CTGATGATGAAGAGAATTCG+AGG | 0.517371 | 3_3:+64644951 | Msa0464590:CDS |
| GAAATTTAAACATTTCTGAT+GGG | 0.517887 | 3_3:+64649109 | Msa0464590:CDS |
| CCAAACAGACAGATACTTGA+AGG | 0.519598 | 3_3:+64651432 | Msa0464590:intron |
| GTAGGAGATGCATATGCATC+TGG | 0.520920 | 3_3:-64650604 | None:intergenic |
| CAGTATAACAAGATTGTAAG+TGG | 0.525169 | 3_3:-64648853 | None:intergenic |
| AAGAGTTCGGTTTCCGAAGA+CGG | 0.526309 | 3_3:-64644877 | None:intergenic |
| GAAACCATATCATCATCAAT+GGG | 0.526696 | 3_3:+64649081 | Msa0464590:CDS |
| CATAATTTAAAAGTCATACC+TGG | 0.529962 | 3_3:+64651705 | Msa0464590:three_prime_UTR |
| AATGTTGGTCAAATCCCTAC+AGG | 0.530249 | 3_3:+64649443 | Msa0464590:CDS |
| GGGCGAGTGATAGGAAGAAG+AGG | 0.530486 | 3_3:+64645367 | Msa0464590:CDS |
| TTTATGATGCAGCAGAATGT+TGG | 0.530625 | 3_3:+64649428 | Msa0464590:intron |
| ACAGCTCCTATCTCCAATAG+TGG | 0.530760 | 3_3:+64649656 | Msa0464590:CDS |
| CCATACTGTGTATAGATGTA+TGG | 0.533856 | 3_3:-64650117 | None:intergenic |
| ATATCAGAATCTGTTCCTCC+TGG | 0.533864 | 3_3:+64650640 | Msa0464590:CDS |
| TGATGTTGGGCCACCACTGA+AGG | 0.534885 | 3_3:+64649212 | Msa0464590:CDS |
| ACTATTCCAAACCGACTCCA+TGG | 0.535477 | 3_3:+64650759 | Msa0464590:CDS |
| GGAAACGGATATTGAGAAGA+AGG | 0.537226 | 3_3:+64645188 | Msa0464590:CDS |
| CGTTTCCATCGCCTCACAGA+TGG | 0.538527 | 3_3:-64645172 | None:intergenic |
| AAGTTCTCATCATGAGAAGC+AGG | 0.540307 | 3_3:+64649059 | Msa0464590:CDS |
| ATTTCTAGTAGAAATCAGTC+AGG | 0.540543 | 3_3:+64650016 | Msa0464590:CDS |
| TTGTGGAGGAGTTGATAAAG+AGG | 0.540563 | 3_3:+64645283 | Msa0464590:CDS |
| TTACAATCTTGTTATACTGA+TGG | 0.545959 | 3_3:+64648857 | Msa0464590:CDS |
| ATCGCCTCACAGATGGCTAA+AGG | 0.547193 | 3_3:-64645165 | None:intergenic |
| GAAACCGAACTCTTCCGCTC+CGG | 0.547602 | 3_3:+64644886 | Msa0464590:CDS |
| ATGTACCTGCTCATTTCCAT+GGG | 0.549464 | 3_3:-64649789 | None:intergenic |
| CAATCTTCATGCCACCTGTA+GGG | 0.551092 | 3_3:-64649457 | None:intergenic |
| AGTCAGAGGAAGCGGAAGCG+TGG | 0.553918 | 3_3:+64645105 | Msa0464590:CDS |
| CAGAACCTGCACAGTAACCT+CGG | 0.555125 | 3_3:-64651506 | None:intergenic |
| GGCTTCCGCCGTAACCGTTG+CGG | 0.555150 | 3_3:-64644663 | None:intergenic |
| CTATTCCAAACCGACTCCAT+GGG | 0.555287 | 3_3:+64650760 | Msa0464590:CDS |
| GTCAGAGGAAGCGGAAGCGT+GGG | 0.555318 | 3_3:+64645106 | Msa0464590:CDS |
| AACATATTTGAGTGCACCGA+AGG | 0.555492 | 3_3:-64650524 | None:intergenic |
| ACAGGTGGCATTAAGATTGA+CGG | 0.556602 | 3_3:+64649030 | Msa0464590:CDS |
| TCAATCTTCATGCCACCTGT+AGG | 0.557193 | 3_3:-64649458 | None:intergenic |
| TGGGAATTTGAATGGTGACC+TGG | 0.557865 | 3_3:+64649128 | Msa0464590:CDS |
| AATACAGAGGCGGAATTGAA+GGG | 0.558985 | 3_3:+64645318 | Msa0464590:CDS |
| TTAGTTCAGAATACATAGCC+AGG | 0.561218 | 3_3:-64649146 | None:intergenic |
| TCATTCTTGGCGTCCTTCAG+TGG | 0.561757 | 3_3:-64649225 | None:intergenic |
| CATCTTCTTAGCTCTGTGGT+GGG | 0.564434 | 3_3:+64649944 | Msa0464590:CDS |
| CATCTGTGAGGCGATGGAAA+CGG | 0.565278 | 3_3:+64645173 | Msa0464590:CDS |
| CTGATTTGTTGCCAACTGGA+TGG | 0.565514 | 3_3:+64645415 | Msa0464590:CDS |
| TTTAGCCATCTGTGAGGCGA+TGG | 0.566073 | 3_3:+64645167 | Msa0464590:CDS |
| GTGGTGGGCATGGAGCAAAA+TGG | 0.566746 | 3_3:+64649959 | Msa0464590:CDS |
| TGTTCCCCATGGAAATGAGC+AGG | 0.567885 | 3_3:+64649784 | Msa0464590:CDS |
| TGTATGGTGATGTTCATTCT+GGG | 0.567907 | 3_3:-64650101 | None:intergenic |
| TTTAGGAAAACCCATGGAGT+CGG | 0.570125 | 3_3:-64650770 | None:intergenic |
| AACCATCAACGAAACCGCAA+CGG | 0.570789 | 3_3:+64644649 | Msa0464590:CDS |
| GCTTCTTGCCAGAGCTCAGA+CGG | 0.571788 | 3_3:+64651545 | Msa0464590:three_prime_UTR |
| AGGATTATTGATCTTCTCCA+GGG | 0.572709 | 3_3:+64644971 | Msa0464590:CDS |
| TGTGCTGAAGGACTCTGCTG+AGG | 0.574046 | 3_3:+64650156 | Msa0464590:CDS |
| ATAAATTCAGCTGATCGTGC+TGG | 0.574766 | 3_3:+64651469 | Msa0464590:three_prime_UTR |
| ACATCTTCTTAGCTCTGTGG+TGG | 0.575021 | 3_3:+64649943 | Msa0464590:CDS |
| GAACGGTTCAATTGGTGGTG+TGG | 0.576842 | 3_3:+64645077 | Msa0464590:intron |
| AGAGGAAGCGGAAGCGTGGG+CGG | 0.577429 | 3_3:+64645109 | Msa0464590:CDS |
| GTGGCCTATGTCTTGAACAC+CGG | 0.577530 | 3_3:-64648834 | None:intergenic |
| TTCTTGGCGTCCTTCAGTGG+TGG | 0.580276 | 3_3:-64649222 | None:intergenic |
| ATTGTTAGCTGCATAAAGAT+CGG | 0.580679 | 3_3:-64650314 | None:intergenic |
| AGCACAAGCTTCCATCCAGT+TGG | 0.582002 | 3_3:-64645426 | None:intergenic |
| AGCACAAACTTCTGTGCTGA+AGG | 0.583532 | 3_3:+64650144 | Msa0464590:CDS |
| TATTGAGAAGAAGGTGGATG+CGG | 0.585813 | 3_3:+64645197 | Msa0464590:CDS |
| GTGATGTTCATTCTGGGATG+GGG | 0.585978 | 3_3:-64650095 | None:intergenic |
| CAAATCTTGCTTATCAGAGG+TGG | 0.587501 | 3_3:+64650720 | Msa0464590:CDS |
| CGAGTGATAGGAAGAAGAGG+AGG | 0.587745 | 3_3:+64645370 | Msa0464590:CDS |
| AAACAAATCTTGCTTATCAG+AGG | 0.587926 | 3_3:+64650717 | Msa0464590:CDS |
| GTGCTGAAGGACTCTGCTGA+GGG | 0.591480 | 3_3:+64650157 | Msa0464590:CDS |
| AGATGGCTAAAGGTGTCTCC+GGG | 0.591601 | 3_3:-64645155 | None:intergenic |
| GCACTCAAATATGTTGATGC+TGG | 0.591780 | 3_3:+64650532 | Msa0464590:CDS |
| AATGATGATGGTGTCAGCAA+AGG | 0.593918 | 3_3:+64650694 | Msa0464590:CDS |
| GCATCTCCTACAGTCATGCA+GGG | 0.595735 | 3_3:+64650616 | Msa0464590:CDS |
| TACTGTGAAACTGTTCCCCA+TGG | 0.596105 | 3_3:+64649773 | Msa0464590:CDS |
| AACGGATATTGAGAAGAAGG+TGG | 0.596575 | 3_3:+64645191 | Msa0464590:CDS |
| CAACATCAGTTGAATGCTCA+GGG | 0.596858 | 3_3:-64649197 | None:intergenic |
| ATTGGAAGAAACAGGAGCAA+CGG | 0.597395 | 3_3:-64644918 | None:intergenic |
| AGTCAAACTGGCGTCCATCA+GGG | 0.599442 | 3_3:-64648775 | None:intergenic |
| GAAGCGACGGTTACGAGCGG+TGG | 0.601456 | 3_3:-64644771 | None:intergenic |
| GATATCCCCTGCATGACTGT+AGG | 0.602445 | 3_3:-64650622 | None:intergenic |
| TCAGAATCTGTTCCTCCTGG+TGG | 0.603890 | 3_3:+64650643 | Msa0464590:CDS |
| CCGAAATTTAGGAAAACCCA+TGG | 0.605566 | 3_3:-64650776 | None:intergenic |
| AGAGTATAAACCTTGAGTAA+CGG | 0.611091 | 3_3:-64645491 | None:intergenic |
| GTGCTTATAGTGCAGAGGAG+AGG | 0.615713 | 3_3:+64645444 | Msa0464590:CDS |
| AGAACCTGCACAGTAACCTC+GGG | 0.615796 | 3_3:-64651505 | None:intergenic |
| AATTCAGCTGATCGTGCTGG+TGG | 0.618388 | 3_3:+64651472 | Msa0464590:three_prime_UTR |
| TACGGAAATGGTTACTGCTG+AGG | 0.620601 | 3_3:+64645221 | Msa0464590:CDS |
| ATAGGAGCTGTGAAATCCAA+AGG | 0.621366 | 3_3:-64649644 | None:intergenic |
| CGGAATCGTCATCGAAGCGA+CGG | 0.622927 | 3_3:-64644784 | None:intergenic |
| CATGAAACAATTCCCAGCTG+AGG | 0.628682 | 3_3:-64650565 | None:intergenic |
| AGCTTGTGCTTATAGTGCAG+AGG | 0.629929 | 3_3:+64645439 | Msa0464590:CDS |
| AACGGGAGCAGGAACCGGAG+CGG | 0.630123 | 3_3:-64644900 | None:intergenic |
| GAGAGAACATGGGATCCCAA+TGG | 0.632498 | 3_3:+64650220 | Msa0464590:CDS |
| TGAATGCTCAGGGACTCTAA+AGG | 0.632617 | 3_3:-64649187 | None:intergenic |
| AATGAGCAGGTACATGTTGG+TGG | 0.633888 | 3_3:+64649797 | Msa0464590:CDS |
| TTTGGCAAGCAAAATGATGA+TGG | 0.635791 | 3_3:+64650682 | Msa0464590:CDS |
| GTGGGCATGGAGCAAAATGG+TGG | 0.636464 | 3_3:+64649962 | Msa0464590:CDS |
| TCAATCTTAATGCCACCTGT+AGG | 0.639322 | 3_3:-64649027 | None:intergenic |
| TGGTGGCTTCTCAATTCCCG+AGG | 0.639564 | 3_3:+64651489 | Msa0464590:three_prime_UTR |
| CACTCTCATTGAAAACGGAA+CGG | 0.640361 | 3_3:-64644823 | None:intergenic |
| ACGCCAGTTTGACTCATACA+AGG | 0.641521 | 3_3:+64648784 | Msa0464590:CDS |
| GAGAGGGAAGCATAATTCTG+TGG | 0.643274 | 3_3:+64645461 | Msa0464590:CDS |
| GTTGCTCACGTTCCTACAGG+TGG | 0.646311 | 3_3:+64649015 | Msa0464590:CDS |
| TGGTTTAATATACTTCCACC+AGG | 0.649294 | 3_3:-64650658 | None:intergenic |
| TTAAGGCTAGTGATATTGCA+CGG | 0.650209 | 3_3:+64649609 | Msa0464590:CDS |
| GAACTAAGCAATATTACTAG+CGG | 0.651069 | 3_3:+64649162 | Msa0464590:CDS |
| CGAAACCGCAACGGTTACGG+CGG | 0.651773 | 3_3:+64644658 | Msa0464590:CDS |
| GGTTGCATGAAACCTCAGCT+GGG | 0.654100 | 3_3:+64650553 | Msa0464590:CDS |
| CAAATACTAAAATCAACACC+AGG | 0.661085 | 3_3:-64651723 | None:intergenic |
| GAGTTGATAAAGAGGACACA+AGG | 0.661629 | 3_3:+64645291 | Msa0464590:CDS |
| CCAGACACAGATGCATCTTG+TGG | 0.662479 | 3_3:-64650274 | None:intergenic |
| ATCGAAGCGACGGTTACGAG+CGG | 0.666592 | 3_3:-64644774 | None:intergenic |
| AGTTCCAATTGATGACGACA+TGG | 0.667478 | 3_3:-64649516 | None:intergenic |
| CACCTGATGAGAACTTGCAT+AGG | 0.672756 | 3_3:-64649483 | None:intergenic |
| GTTGGTCAAATCCCTACAGG+TGG | 0.673601 | 3_3:+64649446 | Msa0464590:CDS |
| GTGGTGTGGAGTCAAGTCAG+AGG | 0.679001 | 3_3:+64645091 | Msa0464590:CDS |
| TATACATCTTCTTAGCTCTG+TGG | 0.681827 | 3_3:+64649940 | Msa0464590:CDS |
| GTTTGCTGGTAGCAATCCAG+AGG | 0.683568 | 3_3:+64649916 | Msa0464590:CDS |
| GCTTCAACACCGAATAACCC+TGG | 0.685343 | 3_3:-64644988 | None:intergenic |
| TCCAATTGATGACGACATGG+TGG | 0.695052 | 3_3:-64649513 | None:intergenic |
| TATCATCATGAAAAGCAGCA+GGG | 0.695361 | 3_3:-64650480 | None:intergenic |
| GGAAATGAGCAGGTACATGT+TGG | 0.699617 | 3_3:+64649794 | Msa0464590:CDS |
| CATCTCCTACAGTCATGCAG+GGG | 0.703501 | 3_3:+64650617 | Msa0464590:CDS |
| AGCCATTGATGAGAGAACAT+GGG | 0.705106 | 3_3:+64650210 | Msa0464590:CDS |
| ACAAGGAATGAATACAGAGG+CGG | 0.723274 | 3_3:+64645308 | Msa0464590:CDS |
| TTTAATATACTTCCACCAGG+AGG | 0.736716 | 3_3:-64650655 | None:intergenic |
| GACACCTTTAGCCATCTGTG+AGG | 0.739911 | 3_3:+64645161 | Msa0464590:CDS |
| GACACAAGGAATGAATACAG+AGG | 0.745098 | 3_3:+64645305 | Msa0464590:CDS |
| GCTCTCCAGTAATATCAATG+TGG | 0.748735 | 3_3:+64648889 | Msa0464590:CDS |
| TGTACCTGCTCATTTCCATG+GGG | 0.765716 | 3_3:-64649788 | None:intergenic |
| AAGAAACGGAAGAGTCACAG+TGG | 0.769225 | 3_3:-64644696 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTAATAATAATAA+AGG | - | chr3_3:64646241-64646260 | None:intergenic | 0.0% |
| !!! | TACATTAATAATATTTCTTT+TGG | + | chr3_3:64650244-64650263 | Msa0464590:CDS | 10.0% |
| !! | AGTTTATGAACAATATAATA+AGG | + | chr3_3:64647777-64647796 | Msa0464590:intron | 15.0% |
| !! | GTTTATGAACAATATAATAA+GGG | + | chr3_3:64647778-64647797 | Msa0464590:intron | 15.0% |
| !! | TTACAAACTTCATTTAATAA+GGG | - | chr3_3:64648131-64648150 | None:intergenic | 15.0% |
| !! | ATTGTTAATATTAATCCTTA+AGG | + | chr3_3:64648569-64648588 | Msa0464590:intron | 15.0% |
| !! | ATATTATTAATGTATCCATT+GGG | - | chr3_3:64650238-64650257 | None:intergenic | 15.0% |
| !! | AATATTATTAATGTATCCAT+TGG | - | chr3_3:64650239-64650258 | None:intergenic | 15.0% |
| !! | GTAATATTTACAGTATTAAA+AGG | + | chr3_3:64650922-64650941 | Msa0464590:intron | 15.0% |
| !!! | TGTTTGTTAATCTTTATTTA+TGG | + | chr3_3:64650969-64650988 | Msa0464590:intron | 15.0% |
| !!! | TCTTTTAATAATCTGAATTT+TGG | + | chr3_3:64651039-64651058 | Msa0464590:intron | 15.0% |
| !! | ATGAATTATACTTATCTAAT+TGG | - | chr3_3:64651143-64651162 | None:intergenic | 15.0% |
| !!! | ACTTTTAAATTATGAAATTG+GGG | - | chr3_3:64651699-64651718 | None:intergenic | 15.0% |
| !!! | GACTTTTAAATTATGAAATT+GGG | - | chr3_3:64651700-64651719 | None:intergenic | 15.0% |
| !!! | TGACTTTTAAATTATGAAAT+TGG | - | chr3_3:64651701-64651720 | None:intergenic | 15.0% |
| !! | GATAAAAAAAGAGTAATTGA+AGG | - | chr3_3:64645526-64645545 | None:intergenic | 20.0% |
| !! | TCAATTCAAATTCAAATAAG+AGG | - | chr3_3:64645550-64645569 | None:intergenic | 20.0% |
| !! | AAATCAAACCTAACTTTAAA+GGG | - | chr3_3:64645787-64645806 | None:intergenic | 20.0% |
| !! | AGAAATATAAACTTGAAATG+TGG | + | chr3_3:64645875-64645894 | Msa0464590:intron | 20.0% |
| !! | ATCAAATCATTCATAGTAAA+CGG | - | chr3_3:64646142-64646161 | None:intergenic | 20.0% |
| !!! | TAATAATAATGTGTGCTTTT+TGG | + | chr3_3:64646264-64646283 | Msa0464590:intron | 20.0% |
| !! | TGTTTATAAATTATAAGGCT+TGG | - | chr3_3:64646837-64646856 | None:intergenic | 20.0% |
| !! | GGTAGTGTTTATAAATTATA+AGG | - | chr3_3:64646842-64646861 | None:intergenic | 20.0% |
| !!! | TCATTAAGTTTTTCAATACT+TGG | + | chr3_3:64647318-64647337 | Msa0464590:intron | 20.0% |
| !! | TAATAACTACAGAAGTAATA+AGG | + | chr3_3:64647434-64647453 | Msa0464590:intron | 20.0% |
| !!! | GTTGAATTTTTATAAAGGAA+GGG | + | chr3_3:64647950-64647969 | Msa0464590:intron | 20.0% |
| !!! | TTGAATTTTTATAAAGGAAG+GGG | + | chr3_3:64647951-64647970 | Msa0464590:intron | 20.0% |
| !! | TACAAACTTCATTTAATAAG+GGG | - | chr3_3:64648130-64648149 | None:intergenic | 20.0% |
| !! | GTTACAAACTTCATTTAATA+AGG | - | chr3_3:64648132-64648151 | None:intergenic | 20.0% |
| !! | TCTCTGAATTATATAGATTA+TGG | + | chr3_3:64648290-64648309 | Msa0464590:intron | 20.0% |
| !! | GAAATTTAAACATTTCTGAT+GGG | + | chr3_3:64649109-64649128 | Msa0464590:CDS | 20.0% |
| !! | AGTTTATAATGTATGTAATG+AGG | + | chr3_3:64649287-64649306 | Msa0464590:intron | 20.0% |
| !!! | ATTGAAGATATTTCTACTAA+TGG | + | chr3_3:64650040-64650059 | Msa0464590:CDS | 20.0% |
| !! | GTTTCAAAATAAAACATGTA+TGG | + | chr3_3:64650838-64650857 | Msa0464590:three_prime_UTR | 20.0% |
| !! | TAAAAGGATTCGTTTATTTA+TGG | + | chr3_3:64650938-64650957 | Msa0464590:intron | 20.0% |
| !!! | TACAAGTAAAATTTTCCTTT+AGG | + | chr3_3:64651580-64651599 | Msa0464590:three_prime_UTR | 20.0% |
| !!! | AAGAATGTTCTAAACTAAAA+TGG | - | chr3_3:64651607-64651626 | None:intergenic | 20.0% |
| !!! | ATACCAATACATTGAATTTT+TGG | + | chr3_3:64651641-64651660 | Msa0464590:three_prime_UTR | 20.0% |
| !!! | TTTGCTTTTCCTTTTTCATT+AGG | + | chr3_3:64645604-64645623 | Msa0464590:intron | 25.0% |
| ! | CAAAAACAACCTAATGAAAA+AGG | - | chr3_3:64645616-64645635 | None:intergenic | 25.0% |
| ! | GAAAACACTATAAACAATTC+AGG | - | chr3_3:64645762-64645781 | None:intergenic | 25.0% |
| ! | GAAATCAAACCTAACTTTAA+AGG | - | chr3_3:64645788-64645807 | None:intergenic | 25.0% |
| ! | TCAAATCATTCATAGTAAAC+GGG | - | chr3_3:64646141-64646160 | None:intergenic | 25.0% |
| !! | ATTGATTAGTTCGTTCATAT+GGG | + | chr3_3:64646160-64646179 | Msa0464590:intron | 25.0% |
| ! | TGTGTAACCATAGTTATATT+TGG | + | chr3_3:64646298-64646317 | Msa0464590:intron | 25.0% |
| !! | GTTTTCAATTTGATTATGCA+AGG | - | chr3_3:64646383-64646402 | None:intergenic | 25.0% |
| ! | CAACATAATCTTAAAGTCAA+TGG | - | chr3_3:64646574-64646593 | None:intergenic | 25.0% |
| !!! | CTTAGAAGCATATTTTAGTA+TGG | + | chr3_3:64646733-64646752 | Msa0464590:intron | 25.0% |
| ! | TGTTTATAACTTATAACGCT+TGG | - | chr3_3:64646928-64646947 | None:intergenic | 25.0% |
| !!! | TTGAAAAGTTCTAAATCAGT+TGG | - | chr3_3:64646969-64646988 | None:intergenic | 25.0% |
| ! | ATAGGTCTCTTATACTTATT+GGG | - | chr3_3:64647122-64647141 | None:intergenic | 25.0% |
| ! | AATACTTGGATGTGTTAATT+TGG | + | chr3_3:64647332-64647351 | Msa0464590:intron | 25.0% |
| ! | ATCCTATATAATTGGTAAGT+AGG | + | chr3_3:64647376-64647395 | Msa0464590:intron | 25.0% |
| ! | ACTTCTGTAGTTATTAAACT+CGG | - | chr3_3:64647430-64647449 | None:intergenic | 25.0% |
| ! | AGTAATAAGGATACTTGATA+TGG | + | chr3_3:64647447-64647466 | Msa0464590:intron | 25.0% |
| ! | CTAAATTCTGTGATCTAATA+AGG | - | chr3_3:64647499-64647518 | None:intergenic | 25.0% |
| ! | TAAATTAAGCAATCTTGAGT+AGG | + | chr3_3:64647570-64647589 | Msa0464590:intron | 25.0% |
| ! | AGTATAATGTGAATACTAGT+AGG | + | chr3_3:64647872-64647891 | Msa0464590:intron | 25.0% |
| !!! | ATTTGTGTTTGCTATCTTTT+TGG | + | chr3_3:64647913-64647932 | Msa0464590:intron | 25.0% |
| !!! | GATGGGTTGAATTTTTATAA+AGG | + | chr3_3:64647945-64647964 | Msa0464590:intron | 25.0% |
| !! | GGTTGAATTTTTATAAAGGA+AGG | + | chr3_3:64647949-64647968 | Msa0464590:intron | 25.0% |
| ! | GGGATAAAATTAACAAAGAA+TGG | - | chr3_3:64648405-64648424 | None:intergenic | 25.0% |
| ! | TTTCATCCATCTTATTATTG+TGG | - | chr3_3:64648520-64648539 | None:intergenic | 25.0% |
| ! | ATTACAGTAAAACTCATTTC+TGG | - | chr3_3:64648633-64648652 | None:intergenic | 25.0% |
| ! | TTAAGGAAATTACATGAGAA+TGG | - | chr3_3:64648740-64648759 | None:intergenic | 25.0% |
| !! | TTACAATCTTGTTATACTGA+TGG | + | chr3_3:64648857-64648876 | Msa0464590:CDS | 25.0% |
| ! | GGAAATTTAAACATTTCTGA+TGG | + | chr3_3:64649108-64649127 | Msa0464590:CDS | 25.0% |
| ! | TAATGTATGTAATGAGGAAT+TGG | + | chr3_3:64649293-64649312 | Msa0464590:intron | 25.0% |
| !! | TTTTCTGATCCAATAACAAA+AGG | + | chr3_3:64649382-64649401 | Msa0464590:intron | 25.0% |
| !!! | AAACATGTTCCTTTTGTTAT+TGG | - | chr3_3:64649394-64649413 | None:intergenic | 25.0% |
| !!! | TGTTAGTAATTTTGATAGTC+AGG | + | chr3_3:64649736-64649755 | Msa0464590:CDS | 25.0% |
| !! | AACATTTTCTCTTCAGAATT+TGG | - | chr3_3:64649899-64649918 | None:intergenic | 25.0% |
| !!! | ATAATATTTCTTTTGGTGCT+TGG | + | chr3_3:64650251-64650270 | Msa0464590:CDS | 25.0% |
| ! | AGTAATTTATTTACTGTTGC+CGG | + | chr3_3:64650448-64650467 | Msa0464590:CDS | 25.0% |
| ! | ATATTATCAATTTCCAGTTC+AGG | + | chr3_3:64650882-64650901 | Msa0464590:three_prime_UTR | 25.0% |
| ! | TATAAATTTGCCTAATGCAT+AGG | - | chr3_3:64651246-64651265 | None:intergenic | 25.0% |
| ! | TTCTTATAGTACATTTCCTA+GGG | - | chr3_3:64651318-64651337 | None:intergenic | 25.0% |
| ! | ATTCTTATAGTACATTTCCT+AGG | - | chr3_3:64651319-64651338 | None:intergenic | 25.0% |
| ! | AATACAAGCAAAATCAGTAA+AGG | - | chr3_3:64651405-64651424 | None:intergenic | 25.0% |
| !!! | ACTGATTTTGCTTGTATTTT+TGG | + | chr3_3:64651407-64651426 | Msa0464590:intron | 25.0% |
| !! | CTGATTTTGCTTGTATTTTT+GGG | + | chr3_3:64651408-64651427 | Msa0464590:intron | 25.0% |
| ! | CAACCAAAAATTCAATGTAT+TGG | - | chr3_3:64651647-64651666 | None:intergenic | 25.0% |
| ! | CATAATTTAAAAGTCATACC+TGG | + | chr3_3:64651705-64651724 | Msa0464590:three_prime_UTR | 25.0% |
| AGAGTATAAACCTTGAGTAA+CGG | - | chr3_3:64645494-64645513 | None:intergenic | 30.0% | |
| AAACTATGACATATGATAGC+TGG | + | chr3_3:64645715-64645734 | Msa0464590:intron | 30.0% | |
| AACACTATAAACAATTCAGG+CGG | - | chr3_3:64645759-64645778 | None:intergenic | 30.0% | |
| !!! | GTTTTCTTCCCTTTAAAGTT+AGG | + | chr3_3:64645776-64645795 | Msa0464590:intron | 30.0% |
| AGAATCGAACTATGTGTATT+AGG | + | chr3_3:64645916-64645935 | Msa0464590:intron | 30.0% | |
| AATATCAGACATGAACAGTA+TGG | + | chr3_3:64645960-64645979 | Msa0464590:intron | 30.0% | |
| ! | ATTCTAGCAAGTATTAGCTT+TGG | + | chr3_3:64646092-64646111 | Msa0464590:intron | 30.0% |
| CAAATCATTCATAGTAAACG+GGG | - | chr3_3:64646140-64646159 | None:intergenic | 30.0% | |
| ! | GATTGATTAGTTCGTTCATA+TGG | + | chr3_3:64646159-64646178 | Msa0464590:intron | 30.0% |
| AACCATAGTTATATTTGGAC+TGG | + | chr3_3:64646303-64646322 | Msa0464590:intron | 30.0% | |
| AACCAGTCCAAATATAACTA+TGG | - | chr3_3:64646308-64646327 | None:intergenic | 30.0% | |
| AGAACACAAGTTTACAAAGT+TGG | + | chr3_3:64646476-64646495 | Msa0464590:intron | 30.0% | |
| AAAGTCAATGGAACTTCATA+AGG | - | chr3_3:64646562-64646581 | None:intergenic | 30.0% | |
| CTATAATGTCATAGACTGAT+AGG | + | chr3_3:64646602-64646621 | Msa0464590:intron | 30.0% | |
| !! | TGTTTAAGATGTCCAGTTTT+GGG | - | chr3_3:64647072-64647091 | None:intergenic | 30.0% |
| !! | ATGTTTAAGATGTCCAGTTT+TGG | - | chr3_3:64647073-64647092 | None:intergenic | 30.0% |
| CATCTTAAACATAATGTGAG+TGG | + | chr3_3:64647081-64647100 | Msa0464590:intron | 30.0% | |
| CATAGGTCTCTTATACTTAT+TGG | - | chr3_3:64647123-64647142 | None:intergenic | 30.0% | |
| AAGTATAAGAGACCTATGAT+AGG | + | chr3_3:64647125-64647144 | Msa0464590:intron | 30.0% | |
| !!! | TTTGATATCCTTTTAGAACC+TGG | + | chr3_3:64647149-64647168 | Msa0464590:intron | 30.0% |
| CAATCAAGTTAGTTGAAAAG+TGG | - | chr3_3:64647277-64647296 | None:intergenic | 30.0% | |
| ! | CACTTTTCAACTAACTTGAT+TGG | + | chr3_3:64647275-64647294 | Msa0464590:intron | 30.0% |
| GCATGCATATCCTATATAAT+TGG | + | chr3_3:64647368-64647387 | Msa0464590:intron | 30.0% | |
| GTCCTACTTACCAATTATAT+AGG | - | chr3_3:64647381-64647400 | None:intergenic | 30.0% | |
| CAATATAGTTTCAGCAAACA+AGG | - | chr3_3:64647715-64647734 | None:intergenic | 30.0% | |
| CTGAAACTATATTGTTGTGT+TGG | + | chr3_3:64647721-64647740 | Msa0464590:intron | 30.0% | |
| !! | TTTGCTATCTTTTTGGTATG+AGG | + | chr3_3:64647920-64647939 | Msa0464590:intron | 30.0% |
| CTTGAACAATTAAAGAACAC+AGG | - | chr3_3:64648037-64648056 | None:intergenic | 30.0% | |
| ! | TTCAAGCTTTAATCTGCATT+GGG | + | chr3_3:64648051-64648070 | Msa0464590:intron | 30.0% |
| GAAATCATGGATACTGAAAT+AGG | - | chr3_3:64648084-64648103 | None:intergenic | 30.0% | |
| GGTATTACAAAAGGAAATCA+TGG | - | chr3_3:64648097-64648116 | None:intergenic | 30.0% | |
| ! | TCCTTTTGTAATACCATCTA+TGG | + | chr3_3:64648102-64648121 | Msa0464590:intron | 30.0% |
| ATATGCATGTAAGTAGATTG+AGG | - | chr3_3:64648196-64648215 | None:intergenic | 30.0% | |
| TGAAAGTTATGAAGATATCG+AGG | - | chr3_3:64648374-64648393 | None:intergenic | 30.0% | |
| ! | TCTTTGTTAATTTTATCCCC+TGG | + | chr3_3:64648406-64648425 | Msa0464590:intron | 30.0% |
| ! | CTTTGTTAATTTTATCCCCT+GGG | + | chr3_3:64648407-64648426 | Msa0464590:intron | 30.0% |
| TCTTATTATTGTGGTCTTCA+TGG | - | chr3_3:64648511-64648530 | None:intergenic | 30.0% | |
| TGAAGACCACAATAATAAGA+TGG | + | chr3_3:64648511-64648530 | Msa0464590:intron | 30.0% | |
| ! | CTTGATAACTTCATTCCTTA+AGG | - | chr3_3:64648587-64648606 | None:intergenic | 30.0% |
| CAGTATAACAAGATTGTAAG+TGG | - | chr3_3:64648856-64648875 | None:intergenic | 30.0% | |
| ! | AAACTTGTCGCTTATGTTAT+TGG | - | chr3_3:64648962-64648981 | None:intergenic | 30.0% |
| GAAACCATATCATCATCAAT+GGG | + | chr3_3:64649081-64649100 | Msa0464590:CDS | 30.0% | |
| ATTTCTGATGGGAATTTGAA+TGG | + | chr3_3:64649120-64649139 | Msa0464590:CDS | 30.0% | |
| GAACTAAGCAATATTACTAG+CGG | + | chr3_3:64649162-64649181 | Msa0464590:CDS | 30.0% | |
| AACTGAATTTGCATCATTCT+TGG | - | chr3_3:64649241-64649260 | None:intergenic | 30.0% | |
| AATGATGCAAATTCAGTTCA+GGG | + | chr3_3:64649243-64649262 | Msa0464590:CDS | 30.0% | |
| AATAATTAACTCTGCTGCAA+AGG | - | chr3_3:64649363-64649382 | None:intergenic | 30.0% | |
| GAAAACCACATTCAGAAAAT+AGG | + | chr3_3:64649851-64649870 | Msa0464590:CDS | 30.0% | |
| !! | ATTTCTAGTAGAAATCAGTC+AGG | + | chr3_3:64650016-64650035 | Msa0464590:CDS | 30.0% |
| ATTGTTAGCTGCATAAAGAT+CGG | - | chr3_3:64650317-64650336 | None:intergenic | 30.0% | |
| GTAATTTATTTACTGTTGCC+GGG | + | chr3_3:64650449-64650468 | Msa0464590:CDS | 30.0% | |
| ! | GGAAGTATATTAAACCAGTT+TGG | + | chr3_3:64650664-64650683 | Msa0464590:CDS | 30.0% |
| AAACAAATCTTGCTTATCAG+AGG | + | chr3_3:64650717-64650736 | Msa0464590:CDS | 30.0% | |
| GGCATAGAAAAAACAACAAT+GGG | - | chr3_3:64651103-64651122 | None:intergenic | 30.0% | |
| TGGCATAGAAAAAACAACAA+TGG | - | chr3_3:64651104-64651123 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTATGCCATGTTCT+AGG | + | chr3_3:64651110-64651129 | Msa0464590:intron | 30.0% |
| !!! | CATGTTTTAAGATCTTGTGT+TGG | + | chr3_3:64651195-64651214 | Msa0464590:intron | 30.0% |
| TAATGCATAGGAAAGGATTA+TGG | - | chr3_3:64651234-64651253 | None:intergenic | 30.0% | |
| ATAATCCTTTCCTATGCATT+AGG | + | chr3_3:64651233-64651252 | Msa0464590:intron | 30.0% | |
| TAGTTAGCAAAAGAATGTTG+AGG | - | chr3_3:64651287-64651306 | None:intergenic | 30.0% | |
| CTAAACTAAAATGGACCTAA+AGG | - | chr3_3:64651598-64651617 | None:intergenic | 30.0% | |
| ATAGTTCCTTCTTCATTTGA+AGG | - | chr3_3:64651672-64651691 | None:intergenic | 30.0% | |
| CAAATACTAAAATCAACACC+AGG | - | chr3_3:64651726-64651745 | None:intergenic | 30.0% | |
| AAAAGACGGAGATCAAGAAA+CGG | - | chr3_3:64644713-64644732 | None:intergenic | 35.0% | |
| !! | ACGGTCAATTTTAGGGATAA+CGG | - | chr3_3:64644807-64644826 | None:intergenic | 35.0% |
| ! | AAACGGAACGGTCAATTTTA+GGG | - | chr3_3:64644814-64644833 | None:intergenic | 35.0% |
| ! | AAAACGGAACGGTCAATTTT+AGG | - | chr3_3:64644815-64644834 | None:intergenic | 35.0% |
| AGGATTATTGATCTTCTCCA+GGG | + | chr3_3:64644971-64644990 | Msa0464590:CDS | 35.0% | |
| !!! | GGAGTTTGTTTTAGATGATG+CGG | + | chr3_3:64645251-64645270 | Msa0464590:CDS | 35.0% |
| !!! | GAGTTTGTTTTAGATGATGC+GGG | + | chr3_3:64645252-64645271 | Msa0464590:CDS | 35.0% |
| !!! | AGTTTGTTTTAGATGATGCG+GGG | + | chr3_3:64645253-64645272 | Msa0464590:CDS | 35.0% |
| TTTATCAACTCCTCCACAAA+CGG | - | chr3_3:64645282-64645301 | None:intergenic | 35.0% | |
| !!! | AAGGGTTTTTTGGAGAGTTT+GGG | + | chr3_3:64645336-64645355 | Msa0464590:CDS | 35.0% |
| TGATAGCTGGATCTGAATTT+AGG | + | chr3_3:64645728-64645747 | Msa0464590:intron | 35.0% | |
| ACACTATAAACAATTCAGGC+GGG | - | chr3_3:64645758-64645777 | None:intergenic | 35.0% | |
| ACATACCTAAGACAGAGTTA+AGG | + | chr3_3:64645989-64646008 | Msa0464590:intron | 35.0% | |
| GCTTATTAGTTCAACCAAGA+AGG | + | chr3_3:64646356-64646375 | Msa0464590:intron | 35.0% | |
| AAAACTGTCCATCATCCTAA+AGG | - | chr3_3:64646782-64646801 | None:intergenic | 35.0% | |
| TGGACAGTCTTCATATAAGT+TGG | - | chr3_3:64646817-64646836 | None:intergenic | 35.0% | |
| TGATTGTTGAAAACTGTCCA+CGG | - | chr3_3:64646882-64646901 | None:intergenic | 35.0% | |
| TGGACAGTCTTCATATAAGT+TGG | - | chr3_3:64646817-64646836 | None:intergenic | 35.0% | |
| TCAGATGTTCAATCCTAACT+GGG | - | chr3_3:64647001-64647020 | None:intergenic | 35.0% | |
| TTCAGATGTTCAATCCTAAC+TGG | - | chr3_3:64647002-64647021 | None:intergenic | 35.0% | |
| AGTTAGGATTGAACATCTGA+AGG | + | chr3_3:64647001-64647020 | Msa0464590:intron | 35.0% | |
| AGGATATCAAAGCCTATCAT+AGG | - | chr3_3:64647140-64647159 | None:intergenic | 35.0% | |
| !! | GCTTAAATCCAGGTTCTAAA+AGG | - | chr3_3:64647160-64647179 | None:intergenic | 35.0% |
| GTTAATTAGGGCTTAAATCC+AGG | - | chr3_3:64647170-64647189 | None:intergenic | 35.0% | |
| CAGTTTGATGGGGTTAATTA+GGG | - | chr3_3:64647182-64647201 | None:intergenic | 35.0% | |
| ACAGTTTGATGGGGTTAATT+AGG | - | chr3_3:64647183-64647202 | None:intergenic | 35.0% | |
| TTCCACATCAACTAGAGATA+TGG | - | chr3_3:64647250-64647269 | None:intergenic | 35.0% | |
| GAAAAACTTAATGAACTCGC+CGG | - | chr3_3:64647312-64647331 | None:intergenic | 35.0% | |
| ACCAAGTTCACTTGTTCAAA+CGG | + | chr3_3:64647399-64647418 | Msa0464590:intron | 35.0% | |
| GATCAAGTTTCTCCCATATA+TGG | + | chr3_3:64647633-64647652 | Msa0464590:intron | 35.0% | |
| GAAGCTATGTTGCCATATAT+GGG | - | chr3_3:64647648-64647667 | None:intergenic | 35.0% | |
| AGAAGCTATGTTGCCATATA+TGG | - | chr3_3:64647649-64647668 | None:intergenic | 35.0% | |
| ! | ATTTTTATAAAGGAAGGGGC+TGG | + | chr3_3:64647955-64647974 | Msa0464590:intron | 35.0% |
| ! | TTTTTATAAAGGAAGGGGCT+GGG | + | chr3_3:64647956-64647975 | Msa0464590:intron | 35.0% |
| AACTTTCCTAGGAAGGATAA+GGG | - | chr3_3:64648006-64648025 | None:intergenic | 35.0% | |
| ! | GTTCAAGCTTTAATCTGCAT+TGG | + | chr3_3:64648050-64648069 | Msa0464590:intron | 35.0% |
| GCCATAGATGGTATTACAAA+AGG | - | chr3_3:64648106-64648125 | None:intergenic | 35.0% | |
| TCATGTCATCTGTGAAAACT+TGG | - | chr3_3:64648236-64648255 | None:intergenic | 35.0% | |
| AAATTACAGCATTGCAGGAA+TGG | - | chr3_3:64648335-64648354 | None:intergenic | 35.0% | |
| AAGAGAAATTACAGCATTGC+AGG | - | chr3_3:64648340-64648359 | None:intergenic | 35.0% | |
| ATGAAGATATCGAGGAATAC+AGG | - | chr3_3:64648366-64648385 | None:intergenic | 35.0% | |
| AACAACCAAATTCATTCCCA+GGG | - | chr3_3:64648426-64648445 | None:intergenic | 35.0% | |
| AAACAACCAAATTCATTCCC+AGG | - | chr3_3:64648427-64648446 | None:intergenic | 35.0% | |
| AGCTGTAACCTGAAATTTCT+TGG | + | chr3_3:64648666-64648685 | Msa0464590:intron | 35.0% | |
| TAACTGTGCCAAGAAATTTC+AGG | - | chr3_3:64648677-64648696 | None:intergenic | 35.0% | |
| CAAGGATGTTTCTTCATACT+TGG | + | chr3_3:64648802-64648821 | Msa0464590:CDS | 35.0% | |
| TCATACTTGGTTTCTTTGTC+CGG | + | chr3_3:64648815-64648834 | Msa0464590:CDS | 35.0% | |
| AGATGCCACATTGATATTAC+TGG | - | chr3_3:64648897-64648916 | None:intergenic | 35.0% | |
| TCTGCTGCATGTATAAAAAG+AGG | - | chr3_3:64648993-64649012 | None:intergenic | 35.0% | |
| GGAAACCATATCATCATCAA+TGG | + | chr3_3:64649080-64649099 | Msa0464590:CDS | 35.0% | |
| !! | AGTTCCCATTGATGATGATA+TGG | - | chr3_3:64649088-64649107 | None:intergenic | 35.0% |
| ATATCATCATCAATGGGAAC+TGG | + | chr3_3:64649087-64649106 | Msa0464590:CDS | 35.0% | |
| TTAGTTCAGAATACATAGCC+AGG | - | chr3_3:64649149-64649168 | None:intergenic | 35.0% | |
| GAATGATGCAAATTCAGTTC+AGG | + | chr3_3:64649242-64649261 | Msa0464590:CDS | 35.0% | |
| ! | AGTTCAGGGATGTTTTCTTT+CGG | + | chr3_3:64649257-64649276 | Msa0464590:CDS | 35.0% |
| GTATGTAATGAGGAATTGGT+TGG | + | chr3_3:64649297-64649316 | Msa0464590:intron | 35.0% | |
| TTTATGATGCAGCAGAATGT+TGG | + | chr3_3:64649428-64649447 | Msa0464590:intron | 35.0% | |
| ! | GTAGTAACCTGACTTTTGAT+CGG | + | chr3_3:64649570-64649589 | Msa0464590:CDS | 35.0% |
| !! | GAAATTGGTGTTAGCTCTTA+AGG | + | chr3_3:64649592-64649611 | Msa0464590:CDS | 35.0% |
| TTAAGGCTAGTGATATTGCA+CGG | + | chr3_3:64649609-64649628 | Msa0464590:CDS | 35.0% | |
| AATGCTGTGACATGCATAAA+AGG | + | chr3_3:64649710-64649729 | Msa0464590:CDS | 35.0% | |
| ! | GATAGTCAGGATAAAAGTAC+AGG | + | chr3_3:64649749-64649768 | Msa0464590:CDS | 35.0% |
| ! | AATGTGGTTTTCCACTAATG+TGG | - | chr3_3:64649843-64649862 | None:intergenic | 35.0% |
| ! | CAGAACCTATTTTCTGAATG+TGG | - | chr3_3:64649859-64649878 | None:intergenic | 35.0% |
| TCTGAAGAGAAAATGTTTGC+TGG | + | chr3_3:64649902-64649921 | Msa0464590:CDS | 35.0% | |
| CTAAGAAGATGTATATCCTC+TGG | - | chr3_3:64649935-64649954 | None:intergenic | 35.0% | |
| !! | TATACATCTTCTTAGCTCTG+TGG | + | chr3_3:64649940-64649959 | Msa0464590:CDS | 35.0% |
| !! | GAACTTCAGTTTAGTTCTGA+AGG | + | chr3_3:64650064-64650083 | Msa0464590:CDS | 35.0% |
| ! | TGTATGGTGATGTTCATTCT+GGG | - | chr3_3:64650104-64650123 | None:intergenic | 35.0% |
| ! | ATGTATGGTGATGTTCATTC+TGG | - | chr3_3:64650105-64650124 | None:intergenic | 35.0% |
| CCATACTGTGTATAGATGTA+TGG | - | chr3_3:64650120-64650139 | None:intergenic | 35.0% | |
| CCATACATCTATACACAGTA+TGG | + | chr3_3:64650117-64650136 | Msa0464590:CDS | 35.0% | |
| TGTGAAAATTTGGCCATTCA+TGG | - | chr3_3:64650398-64650417 | None:intergenic | 35.0% | |
| GATTGTCTGCTGTGAAAATT+TGG | - | chr3_3:64650408-64650427 | None:intergenic | 35.0% | |
| TATCATCATGAAAAGCAGCA+GGG | - | chr3_3:64650483-64650502 | None:intergenic | 35.0% | |
| ATATCATCATGAAAAGCAGC+AGG | - | chr3_3:64650484-64650503 | None:intergenic | 35.0% | |
| GATATGAATAACATAGCAGC+TGG | + | chr3_3:64650499-64650518 | Msa0464590:CDS | 35.0% | |
| TTTAATATACTTCCACCAGG+AGG | - | chr3_3:64650658-64650677 | None:intergenic | 35.0% | |
| TGGTTTAATATACTTCCACC+AGG | - | chr3_3:64650661-64650680 | None:intergenic | 35.0% | |
| TTTGGCAAGCAAAATGATGA+TGG | + | chr3_3:64650682-64650701 | Msa0464590:CDS | 35.0% | |
| ! | CCATGGGTTTTCCTAAATTT+CGG | + | chr3_3:64650776-64650795 | Msa0464590:CDS | 35.0% |
| TCAGGATGATAGCTTAGAAA+AGG | + | chr3_3:64650900-64650919 | Msa0464590:three_prime_UTR | 35.0% | |
| CAACAATGGGATCTATATGA+TGG | - | chr3_3:64651090-64651109 | None:intergenic | 35.0% | |
| ATTTGCCTAATGCATAGGAA+AGG | - | chr3_3:64651241-64651260 | None:intergenic | 35.0% | |
| TTATAGTACATTTCCTAGGG+TGG | - | chr3_3:64651315-64651334 | None:intergenic | 35.0% | |
| ACAAGCAAAATCAGTAAAGG+AGG | - | chr3_3:64651402-64651421 | None:intergenic | 35.0% | |
| GTTGATCCTTCAAATGAAGA+AGG | + | chr3_3:64651663-64651682 | Msa0464590:three_prime_UTR | 35.0% | |
| CAAAAAACTGTTGTGCAAAC+AGG | - | chr3_3:64651760-64651779 | None:intergenic | 35.0% | |
| !! | AAGAGTCACAGTGGTTTGTT+TGG | - | chr3_3:64644690-64644709 | None:intergenic | 40.0% |
| !! | GCTCGAGTTGAGAAAAAAGA+CGG | - | chr3_3:64644727-64644746 | None:intergenic | 40.0% |
| CACTCTCATTGAAAACGGAA+CGG | - | chr3_3:64644826-64644845 | None:intergenic | 40.0% | |
| ATTGGAAGAAACAGGAGCAA+CGG | - | chr3_3:64644921-64644940 | None:intergenic | 40.0% | |
| ATGCGAGAATTGGAAGAAAC+AGG | - | chr3_3:64644929-64644948 | None:intergenic | 40.0% | |
| ATCATCAGCAATGCGAGAAT+TGG | - | chr3_3:64644939-64644958 | None:intergenic | 40.0% | |
| ! | CTGATGATGAAGAGAATTCG+AGG | + | chr3_3:64644951-64644970 | Msa0464590:CDS | 40.0% |
| GAGGATTATTGATCTTCTCC+AGG | + | chr3_3:64644970-64644989 | Msa0464590:CDS | 40.0% | |
| TGATCTTCTCCAGGGTTATT+CGG | + | chr3_3:64644979-64644998 | Msa0464590:CDS | 40.0% | |
| TTCCGCTTCAGATTGAATTC+AGG | + | chr3_3:64645040-64645059 | Msa0464590:intron | 40.0% | |
| ! | GAACCGTTCTGAATGGATAA+CGG | - | chr3_3:64645066-64645085 | None:intergenic | 40.0% |
| TCCATTCAGAACGGTTCAAT+TGG | + | chr3_3:64645069-64645088 | Msa0464590:intron | 40.0% | |
| ! | ACCAATTGAACCGTTCTGAA+TGG | - | chr3_3:64645073-64645092 | None:intergenic | 40.0% |
| ATTCAGAACGGTTCAATTGG+TGG | + | chr3_3:64645072-64645091 | Msa0464590:intron | 40.0% | |
| GGAAACGGATATTGAGAAGA+AGG | + | chr3_3:64645188-64645207 | Msa0464590:CDS | 40.0% | |
| AACGGATATTGAGAAGAAGG+TGG | + | chr3_3:64645191-64645210 | Msa0464590:CDS | 40.0% | |
| TATTGAGAAGAAGGTGGATG+CGG | + | chr3_3:64645197-64645216 | Msa0464590:CDS | 40.0% | |
| !!! | GTTTGTTTTAGATGATGCGG+GGG | + | chr3_3:64645254-64645273 | Msa0464590:CDS | 40.0% |
| !! | TTGTGGAGGAGTTGATAAAG+AGG | + | chr3_3:64645283-64645302 | Msa0464590:CDS | 40.0% |
| !! | GAGTTGATAAAGAGGACACA+AGG | + | chr3_3:64645291-64645310 | Msa0464590:CDS | 40.0% |
| GACACAAGGAATGAATACAG+AGG | + | chr3_3:64645305-64645324 | Msa0464590:CDS | 40.0% | |
| ACAAGGAATGAATACAGAGG+CGG | + | chr3_3:64645308-64645327 | Msa0464590:CDS | 40.0% | |
| AATACAGAGGCGGAATTGAA+GGG | + | chr3_3:64645318-64645337 | Msa0464590:CDS | 40.0% | |
| !!! | GAAGGGTTTTTTGGAGAGTT+TGG | + | chr3_3:64645335-64645354 | Msa0464590:CDS | 40.0% |
| !! | GTTTCTGATTTGTTGCCAAC+TGG | + | chr3_3:64645411-64645430 | Msa0464590:CDS | 40.0% |
| GTGCTTTGTAGTTTGAGAGT+TGG | + | chr3_3:64645669-64645688 | Msa0464590:intron | 40.0% | |
| TACCTAAGACAGAGTTAAGG+AGG | + | chr3_3:64645992-64646011 | Msa0464590:intron | 40.0% | |
| CTGGTGGGATGTTAAAAATG+TGG | + | chr3_3:64646063-64646082 | Msa0464590:intron | 40.0% | |
| ! | GACTGGTTATCATTAGCCTA+GGG | + | chr3_3:64646320-64646339 | Msa0464590:intron | 40.0% |
| ! | TTATCATTAGCCTAGGGCAT+CGG | + | chr3_3:64646326-64646345 | Msa0464590:intron | 40.0% |
| TGATTATGCAAGGACCTTCT+TGG | - | chr3_3:64646373-64646392 | None:intergenic | 40.0% | |
| TGTCATAGACTGATAGGCAT+TGG | + | chr3_3:64646608-64646627 | Msa0464590:intron | 40.0% | |
| ! | TGCTGTTTGTTGATAGAGAG+TGG | + | chr3_3:64646664-64646683 | Msa0464590:intron | 40.0% |
| TAGAGAGTGGTAACTACTTG+CGG | + | chr3_3:64646677-64646696 | Msa0464590:intron | 40.0% | |
| ! | AAGGACTAAACCTCTGCTTT+TGG | - | chr3_3:64646763-64646782 | None:intergenic | 40.0% |
| AAGCAGAGGTTTAGTCCTTT+AGG | + | chr3_3:64646764-64646783 | Msa0464590:intron | 40.0% | |
| !! | GGTTTAGTCCTTTAGGATGA+TGG | + | chr3_3:64646771-64646790 | Msa0464590:intron | 40.0% |
| ACGGTTCGATATATGACACT+CGG | - | chr3_3:64646863-64646882 | None:intergenic | 40.0% | |
| TCAGTTGGAGATATGACACT+CGG | - | chr3_3:64646954-64646973 | None:intergenic | 40.0% | |
| ATGTTCAATCCTAACTGGGA+GGG | - | chr3_3:64646997-64647016 | None:intergenic | 40.0% | |
| TAGGATTGAACATCTGAAGG+TGG | + | chr3_3:64647004-64647023 | Msa0464590:intron | 40.0% | |
| !! | ATCTGAAGGTGGACTAATTC+TGG | + | chr3_3:64647015-64647034 | Msa0464590:intron | 40.0% |
| GTGAGTGGTATTTACTACCT+TGG | + | chr3_3:64647096-64647115 | Msa0464590:intron | 40.0% | |
| CTCTTATACTTATTGGGCCA+AGG | - | chr3_3:64647116-64647135 | None:intergenic | 40.0% | |
| TCCTTACACGACAGTTTGAT+GGG | - | chr3_3:64647193-64647212 | None:intergenic | 40.0% | |
| ATCAACTAGAGATATGGCCT+TGG | - | chr3_3:64647244-64647263 | None:intergenic | 40.0% | |
| ACCGTTTGAACAAGTGAACT+TGG | - | chr3_3:64647403-64647422 | None:intergenic | 40.0% | |
| !! | GCTATCTTTTTGGTATGAGG+TGG | + | chr3_3:64647923-64647942 | Msa0464590:intron | 40.0% |
| !! | TCTTTTTGGTATGAGGTGGA+TGG | + | chr3_3:64647927-64647946 | Msa0464590:intron | 40.0% |
| !! | CTTTTTGGTATGAGGTGGAT+GGG | + | chr3_3:64647928-64647947 | Msa0464590:intron | 40.0% |
| ! | TTTTATAAAGGAAGGGGCTG+GGG | + | chr3_3:64647957-64647976 | Msa0464590:intron | 40.0% |
| CAACTTTCCTAGGAAGGATA+AGG | - | chr3_3:64648007-64648026 | None:intergenic | 40.0% | |
| TTAATAAGGGGAGCCATAGA+TGG | - | chr3_3:64648118-64648137 | None:intergenic | 40.0% | |
| TTATCCCCTGGGAATGAATT+TGG | + | chr3_3:64648418-64648437 | Msa0464590:intron | 40.0% | |
| ACAACCAAATTCATTCCCAG+GGG | - | chr3_3:64648425-64648444 | None:intergenic | 40.0% | |
| TGAAAAGACGATGCTAGCTA+GGG | - | chr3_3:64648469-64648488 | None:intergenic | 40.0% | |
| ! | AGCATTTGTATGTGACTTGC+AGG | + | chr3_3:64648605-64648624 | Msa0464590:intron | 40.0% |
| ! | GCATTTGTATGTGACTTGCA+GGG | + | chr3_3:64648606-64648625 | Msa0464590:intron | 40.0% |
| GGCTGGATGGAATCAAATTA+AGG | - | chr3_3:64648757-64648776 | None:intergenic | 40.0% | |
| CATCCTTGTATGAGTCAAAC+TGG | - | chr3_3:64648790-64648809 | None:intergenic | 40.0% | |
| GCTCTCCAGTAATATCAATG+TGG | + | chr3_3:64648889-64648908 | Msa0464590:CDS | 40.0% | |
| TCAATCTTAATGCCACCTGT+AGG | - | chr3_3:64649030-64649049 | None:intergenic | 40.0% | |
| ACAGGTGGCATTAAGATTGA+CGG | + | chr3_3:64649030-64649049 | Msa0464590:CDS | 40.0% | |
| AAGTTCTCATCATGAGAAGC+AGG | + | chr3_3:64649059-64649078 | Msa0464590:CDS | 40.0% | |
| CAACATCAGTTGAATGCTCA+GGG | - | chr3_3:64649200-64649219 | None:intergenic | 40.0% | |
| CTGAGCATTCAACTGATGTT+GGG | + | chr3_3:64649199-64649218 | Msa0464590:CDS | 40.0% | |
| AATGTTGGTCAAATCCCTAC+AGG | + | chr3_3:64649443-64649462 | Msa0464590:CDS | 40.0% | |
| !! | AGTTCCAATTGATGACGACA+TGG | - | chr3_3:64649519-64649538 | None:intergenic | 40.0% |
| CCAATTTCCGATCAAAAGTC+AGG | - | chr3_3:64649580-64649599 | None:intergenic | 40.0% | |
| ! | CCTGACTTTTGATCGGAAAT+TGG | + | chr3_3:64649577-64649596 | Msa0464590:CDS | 40.0% |
| ATAGGAGCTGTGAAATCCAA+AGG | - | chr3_3:64649647-64649666 | None:intergenic | 40.0% | |
| ATCAATACCAGAGCCACTAT+TGG | - | chr3_3:64649672-64649691 | None:intergenic | 40.0% | |
| ATGTACCTGCTCATTTCCAT+GGG | - | chr3_3:64649792-64649811 | None:intergenic | 40.0% | |
| ! | TTTTCCACTAATGTGGAGGA+AGG | - | chr3_3:64649836-64649855 | None:intergenic | 40.0% |
| AGCCATTGATGAGAGAACAT+GGG | + | chr3_3:64650210-64650229 | Msa0464590:CDS | 40.0% | |
| ATCCCATGTTCTCTCATCAA+TGG | - | chr3_3:64650215-64650234 | None:intergenic | 40.0% | |
| CAGAAAAGCAGTTCCATGAA+TGG | + | chr3_3:64650382-64650401 | Msa0464590:CDS | 40.0% | |
| AACATATTTGAGTGCACCGA+AGG | - | chr3_3:64650527-64650546 | None:intergenic | 40.0% | |
| GCACTCAAATATGTTGATGC+TGG | + | chr3_3:64650532-64650551 | Msa0464590:CDS | 40.0% | |
| ATATCAGAATCTGTTCCTCC+TGG | + | chr3_3:64650640-64650659 | Msa0464590:CDS | 40.0% | |
| ! | CATCATTTTGCTTGCCAAAC+TGG | - | chr3_3:64650681-64650700 | None:intergenic | 40.0% |
| !! | AATGATGATGGTGTCAGCAA+AGG | + | chr3_3:64650694-64650713 | Msa0464590:CDS | 40.0% |
| CAAATCTTGCTTATCAGAGG+TGG | + | chr3_3:64650720-64650739 | Msa0464590:CDS | 40.0% | |
| TTTAGGAAAACCCATGGAGT+CGG | - | chr3_3:64650773-64650792 | None:intergenic | 40.0% | |
| CCGAAATTTAGGAAAACCCA+TGG | - | chr3_3:64650779-64650798 | None:intergenic | 40.0% | |
| GCACTACATCTGAATCTATC+TGG | - | chr3_3:64650808-64650827 | None:intergenic | 40.0% | |
| TCTAAGCTATCATCCTGAAC+TGG | - | chr3_3:64650898-64650917 | None:intergenic | 40.0% | |
| AGATCTTGTGTTGGAATCAC+TGG | + | chr3_3:64651204-64651223 | Msa0464590:intron | 40.0% | |
| GCAAAATCAGTAAAGGAGGA+GGG | - | chr3_3:64651398-64651417 | None:intergenic | 40.0% | |
| AGCAAAATCAGTAAAGGAGG+AGG | - | chr3_3:64651399-64651418 | None:intergenic | 40.0% | |
| CCTTCAAGTATCTGTCTGTT+TGG | - | chr3_3:64651435-64651454 | None:intergenic | 40.0% | |
| CCAAACAGACAGATACTTGA+AGG | + | chr3_3:64651432-64651451 | Msa0464590:intron | 40.0% | |
| ATAAATTCAGCTGATCGTGC+TGG | + | chr3_3:64651469-64651488 | Msa0464590:three_prime_UTR | 40.0% | |
| AACCATCAACGAAACCGCAA+CGG | + | chr3_3:64644649-64644668 | Msa0464590:CDS | 45.0% | |
| !! | AGTCACAGTGGTTTGTTTGG+TGG | - | chr3_3:64644687-64644706 | None:intergenic | 45.0% |
| AAGAAACGGAAGAGTCACAG+TGG | - | chr3_3:64644699-64644718 | None:intergenic | 45.0% | |
| !! | TCCGTTTTCAATGAGAGTGC+CGG | + | chr3_3:64644827-64644846 | Msa0464590:CDS | 45.0% |
| ACCGGCACTCTCATTGAAAA+CGG | - | chr3_3:64644831-64644850 | None:intergenic | 45.0% | |
| GACGAGAATACGTCTGTTTC+CGG | - | chr3_3:64644856-64644875 | None:intergenic | 45.0% | |
| AAGAGTTCGGTTTCCGAAGA+CGG | - | chr3_3:64644880-64644899 | None:intergenic | 45.0% | |
| TTGGAAGAAACAGGAGCAAC+GGG | - | chr3_3:64644920-64644939 | None:intergenic | 45.0% | |
| ! | CAATCTGAAGCGGAACAACA+CGG | - | chr3_3:64645035-64645054 | None:intergenic | 45.0% |
| GGCCTGAATTCAATCTGAAG+CGG | - | chr3_3:64645045-64645064 | None:intergenic | 45.0% | |
| AGGCCGTTATCCATTCAGAA+CGG | + | chr3_3:64645060-64645079 | Msa0464590:intron | 45.0% | |
| TACGGAAATGGTTACTGCTG+AGG | + | chr3_3:64645221-64645240 | Msa0464590:CDS | 45.0% | |
| GAATACAGAGGCGGAATTGA+AGG | + | chr3_3:64645317-64645336 | Msa0464590:CDS | 45.0% | |
| !!! | GGCGGAATTGAAGGGTTTTT+TGG | + | chr3_3:64645326-64645345 | Msa0464590:CDS | 45.0% |
| !!! | GGTTTTTTGGAGAGTTTGGG+TGG | + | chr3_3:64645339-64645358 | Msa0464590:CDS | 45.0% |
| !! | CTGATTTGTTGCCAACTGGA+TGG | + | chr3_3:64645415-64645434 | Msa0464590:CDS | 45.0% |
| AGCTTGTGCTTATAGTGCAG+AGG | + | chr3_3:64645439-64645458 | Msa0464590:CDS | 45.0% | |
| TGCTTATAGTGCAGAGGAGA+GGG | + | chr3_3:64645445-64645464 | Msa0464590:CDS | 45.0% | |
| ! | GAGAGGGAAGCATAATTCTG+TGG | + | chr3_3:64645461-64645480 | Msa0464590:CDS | 45.0% |
| CACCTCCTTAACTCTGTCTT+AGG | - | chr3_3:64645997-64646016 | None:intergenic | 45.0% | |
| CTAAGACAGAGTTAAGGAGG+TGG | + | chr3_3:64645995-64646014 | Msa0464590:intron | 45.0% | |
| ! | CGACATCACAAAGTGCCAAA+AGG | - | chr3_3:64646033-64646052 | None:intergenic | 45.0% |
| GTGATGTCGAAGAGGTAAAC+TGG | + | chr3_3:64646044-64646063 | Msa0464590:intron | 45.0% | |
| ATGTCGAAGAGGTAAACTGG+TGG | + | chr3_3:64646047-64646066 | Msa0464590:intron | 45.0% | |
| TGTCGAAGAGGTAAACTGGT+GGG | + | chr3_3:64646048-64646067 | Msa0464590:intron | 45.0% | |
| !! | GGACTGGTTATCATTAGCCT+AGG | + | chr3_3:64646319-64646338 | Msa0464590:intron | 45.0% |
| GTATGGCATTCCAAAAGCAG+AGG | + | chr3_3:64646750-64646769 | Msa0464590:intron | 45.0% | |
| GAGTGTCATATATCGAACCG+TGG | + | chr3_3:64646862-64646881 | Msa0464590:intron | 45.0% | |
| TGTTCAATCCTAACTGGGAG+GGG | - | chr3_3:64646996-64647015 | None:intergenic | 45.0% | |
| GATGTTCAATCCTAACTGGG+AGG | - | chr3_3:64646998-64647017 | None:intergenic | 45.0% | |
| !! | TGAAGGTGGACTAATTCTGG+TGG | + | chr3_3:64647018-64647037 | Msa0464590:intron | 45.0% |
| !!! | AGATGTCCAGTTTTGGGTGA+GGG | - | chr3_3:64647066-64647085 | None:intergenic | 45.0% |
| !!! | AAGATGTCCAGTTTTGGGTG+AGG | - | chr3_3:64647067-64647086 | None:intergenic | 45.0% |
| CCTTACACGACAGTTTGATG+GGG | - | chr3_3:64647192-64647211 | None:intergenic | 45.0% | |
| CTCCTTACACGACAGTTTGA+TGG | - | chr3_3:64647194-64647213 | None:intergenic | 45.0% | |
| CATCAAACTGTCGTGTAAGG+AGG | + | chr3_3:64647192-64647211 | Msa0464590:intron | 45.0% | |
| TTGGCAGTGCTAATAAGGCT+TGG | - | chr3_3:64647225-64647244 | None:intergenic | 45.0% | |
| !! | AAGCCTTATTAGCACTGCCA+AGG | + | chr3_3:64647224-64647243 | Msa0464590:intron | 45.0% |
| ! | GGCCATATCTCTAGTTGATG+TGG | + | chr3_3:64647245-64647264 | Msa0464590:intron | 45.0% |
| ! | CTAACTTGATTGGTTCAGCG+AGG | + | chr3_3:64647285-64647304 | Msa0464590:intron | 45.0% |
| GAAGGATAAGGGCTGATCAA+GGG | - | chr3_3:64647995-64648014 | None:intergenic | 45.0% | |
| TGCAGACAACTTTCCTAGGA+AGG | - | chr3_3:64648013-64648032 | None:intergenic | 45.0% | |
| CTGAAAAGACGATGCTAGCT+AGG | - | chr3_3:64648470-64648489 | None:intergenic | 45.0% | |
| ACGCCAGTTTGACTCATACA+AGG | + | chr3_3:64648784-64648803 | Msa0464590:CDS | 45.0% | |
| TTGTCCGGTGTTCAAGACAT+AGG | + | chr3_3:64648830-64648849 | Msa0464590:CDS | 45.0% | |
| AATGTTGCTCACGTTCCTAC+AGG | + | chr3_3:64649012-64649031 | Msa0464590:CDS | 45.0% | |
| TGGGAATTTGAATGGTGACC+TGG | + | chr3_3:64649128-64649147 | Msa0464590:CDS | 45.0% | |
| TGAATGCTCAGGGACTCTAA+AGG | - | chr3_3:64649190-64649209 | None:intergenic | 45.0% | |
| CCAACATCAGTTGAATGCTC+AGG | - | chr3_3:64649201-64649220 | None:intergenic | 45.0% | |
| CCTGAGCATTCAACTGATGT+TGG | + | chr3_3:64649198-64649217 | Msa0464590:CDS | 45.0% | |
| ! | TCAGGGATGTTTTCTTTCGG+AGG | + | chr3_3:64649260-64649279 | Msa0464590:CDS | 45.0% |
| !! | GGAATTGGTTGGTGCTATTG+TGG | + | chr3_3:64649308-64649327 | Msa0464590:intron | 45.0% |
| CAATCTTCATGCCACCTGTA+GGG | - | chr3_3:64649460-64649479 | None:intergenic | 45.0% | |
| TCAATCTTCATGCCACCTGT+AGG | - | chr3_3:64649461-64649480 | None:intergenic | 45.0% | |
| TGCCTATGCAAGTTCTCATC+AGG | + | chr3_3:64649481-64649500 | Msa0464590:CDS | 45.0% | |
| CACCTGATGAGAACTTGCAT+AGG | - | chr3_3:64649486-64649505 | None:intergenic | 45.0% | |
| ACCACCATGTCGTCATCAAT+TGG | + | chr3_3:64649512-64649531 | Msa0464590:CDS | 45.0% | |
| !! | TCCAATTGATGACGACATGG+TGG | - | chr3_3:64649516-64649535 | None:intergenic | 45.0% |
| GAAAGCTGAACGCTTCTAAC+AGG | + | chr3_3:64649540-64649559 | Msa0464590:CDS | 45.0% | |
| AGTGATATTGCACGGAATCC+AGG | + | chr3_3:64649617-64649636 | Msa0464590:CDS | 45.0% | |
| ACAGCTCCTATCTCCAATAG+TGG | + | chr3_3:64649656-64649675 | Msa0464590:CDS | 45.0% | |
| TACTGTGAAACTGTTCCCCA+TGG | + | chr3_3:64649773-64649792 | Msa0464590:CDS | 45.0% | |
| TGTACCTGCTCATTTCCATG+GGG | - | chr3_3:64649791-64649810 | None:intergenic | 45.0% | |
| CATGTACCTGCTCATTTCCA+TGG | - | chr3_3:64649793-64649812 | None:intergenic | 45.0% | |
| GGAAATGAGCAGGTACATGT+TGG | + | chr3_3:64649794-64649813 | Msa0464590:CDS | 45.0% | |
| AATGAGCAGGTACATGTTGG+TGG | + | chr3_3:64649797-64649816 | Msa0464590:CDS | 45.0% | |
| !! | AGGTACATGTTGGTGGCAAT+GGG | + | chr3_3:64649804-64649823 | Msa0464590:CDS | 45.0% |
| ! | GTGGTTTTCCACTAATGTGG+AGG | - | chr3_3:64649840-64649859 | None:intergenic | 45.0% |
| !! | AGGTTCTGAAAGCAGCATAC+TGG | + | chr3_3:64649871-64649890 | Msa0464590:CDS | 45.0% |
| !! | ACATCTTCTTAGCTCTGTGG+TGG | + | chr3_3:64649943-64649962 | Msa0464590:CDS | 45.0% |
| !! | CATCTTCTTAGCTCTGTGGT+GGG | + | chr3_3:64649944-64649963 | Msa0464590:CDS | 45.0% |
| !! | GTGATGTTCATTCTGGGATG+GGG | - | chr3_3:64650098-64650117 | None:intergenic | 45.0% |
| !! | GGTGATGTTCATTCTGGGAT+GGG | - | chr3_3:64650099-64650118 | None:intergenic | 45.0% |
| ! | TGGTGATGTTCATTCTGGGA+TGG | - | chr3_3:64650100-64650119 | None:intergenic | 45.0% |
| AGCACAAACTTCTGTGCTGA+AGG | + | chr3_3:64650144-64650163 | Msa0464590:CDS | 45.0% | |
| CAGCCATTGATGAGAGAACA+TGG | + | chr3_3:64650209-64650228 | Msa0464590:CDS | 45.0% | |
| CTTCTCGCAACTTCATCTGT+TGG | - | chr3_3:64650355-64650374 | None:intergenic | 45.0% | |
| AACATAGCAGCTGGAACCTT+CGG | + | chr3_3:64650508-64650527 | Msa0464590:CDS | 45.0% | |
| CATGAAACAATTCCCAGCTG+AGG | - | chr3_3:64650568-64650587 | None:intergenic | 45.0% | |
| GTAGGAGATGCATATGCATC+TGG | - | chr3_3:64650607-64650626 | None:intergenic | 45.0% | |
| ! | ACTATTCCAAACCGACTCCA+TGG | + | chr3_3:64650759-64650778 | Msa0464590:CDS | 45.0% |
| ! | CTATTCCAAACCGACTCCAT+GGG | + | chr3_3:64650760-64650779 | Msa0464590:CDS | 45.0% |
| TCTGGCTGCTACCGAAATTT+AGG | - | chr3_3:64650790-64650809 | None:intergenic | 45.0% | |
| TTGGCTACAAGCCTAGAACA+TGG | - | chr3_3:64651124-64651143 | None:intergenic | 45.0% | |
| GCTAACTAAATAGCCACCCT+AGG | + | chr3_3:64651299-64651318 | Msa0464590:intron | 45.0% | |
| AAAAAAAGCCGTCTGAGCTC+TGG | - | chr3_3:64651556-64651575 | None:intergenic | 45.0% | |
| AACCGTTGCGGTTTCGTTGA+TGG | - | chr3_3:64644654-64644673 | None:intergenic | 50.0% | |
| CAACGAAACCGCAACGGTTA+CGG | + | chr3_3:64644655-64644674 | Msa0464590:CDS | 50.0% | |
| ATACGTCTGTTTCCGGCTAC+CGG | - | chr3_3:64644849-64644868 | None:intergenic | 50.0% | |
| CGTATTCTCGTCTCCGTCTT+CGG | + | chr3_3:64644864-64644883 | Msa0464590:CDS | 50.0% | |
| GCTTCAACACCGAATAACCC+TGG | - | chr3_3:64644991-64645010 | None:intergenic | 50.0% | |
| !! | GAACGGTTCAATTGGTGGTG+TGG | + | chr3_3:64645077-64645096 | Msa0464590:intron | 50.0% |
| TGGAGTCAAGTCAGAGGAAG+CGG | + | chr3_3:64645097-64645116 | Msa0464590:CDS | 50.0% | |
| !! | AGATGGCTAAAGGTGTCTCC+GGG | - | chr3_3:64645158-64645177 | None:intergenic | 50.0% |
| !! | CAGATGGCTAAAGGTGTCTC+CGG | - | chr3_3:64645159-64645178 | None:intergenic | 50.0% |
| GACACCTTTAGCCATCTGTG+AGG | + | chr3_3:64645161-64645180 | Msa0464590:CDS | 50.0% | |
| ATCGCCTCACAGATGGCTAA+AGG | - | chr3_3:64645168-64645187 | None:intergenic | 50.0% | |
| TTTAGCCATCTGTGAGGCGA+TGG | + | chr3_3:64645167-64645186 | Msa0464590:CDS | 50.0% | |
| CATCTGTGAGGCGATGGAAA+CGG | + | chr3_3:64645173-64645192 | Msa0464590:CDS | 50.0% | |
| GAAGAAGGTGGATGCGGATA+CGG | + | chr3_3:64645203-64645222 | Msa0464590:CDS | 50.0% | |
| GGTTACTGCTGAGGAGAAGA+AGG | + | chr3_3:64645230-64645249 | Msa0464590:CDS | 50.0% | |
| TGGAGAGTTTGGGTGGAGTT+TGG | + | chr3_3:64645346-64645365 | Msa0464590:CDS | 50.0% | |
| GGAGAGTTTGGGTGGAGTTT+GGG | + | chr3_3:64645347-64645366 | Msa0464590:CDS | 50.0% | |
| CGAGTGATAGGAAGAAGAGG+AGG | + | chr3_3:64645370-64645389 | Msa0464590:CDS | 50.0% | |
| AGCACAAGCTTCCATCCAGT+TGG | - | chr3_3:64645429-64645448 | None:intergenic | 50.0% | |
| GTGCTTATAGTGCAGAGGAG+AGG | + | chr3_3:64645444-64645463 | Msa0464590:CDS | 50.0% | |
| ! | TGGTTTGTCGCCGTTACTCA+AGG | + | chr3_3:64645481-64645500 | Msa0464590:CDS | 50.0% |
| GACAGAGTTAAGGAGGTGGA+AGG | + | chr3_3:64645999-64646018 | Msa0464590:intron | 50.0% | |
| !!! | TGGAAGGTGTCAGTGCCTTT+TGG | + | chr3_3:64646015-64646034 | Msa0464590:intron | 50.0% |
| GGCACTTTGTGATGTCGAAG+AGG | + | chr3_3:64646036-64646055 | Msa0464590:intron | 50.0% | |
| ACATCACCCTCACCCAAAAC+TGG | + | chr3_3:64647057-64647076 | Msa0464590:intron | 50.0% | |
| CCCCATCAAACTGTCGTGTA+AGG | + | chr3_3:64647189-64647208 | Msa0464590:intron | 50.0% | |
| ! | TGGCCTTGGCAGTGCTAATA+AGG | - | chr3_3:64647230-64647249 | None:intergenic | 50.0% |
| ! | TTGATTGGTTCAGCGAGGAC+CGG | + | chr3_3:64647290-64647309 | Msa0464590:intron | 50.0% |
| GGAAGGATAAGGGCTGATCA+AGG | - | chr3_3:64647996-64648015 | None:intergenic | 50.0% | |
| GATCAGCCCTTATCCTTCCT+AGG | + | chr3_3:64647997-64648016 | Msa0464590:intron | 50.0% | |
| AGGCTGCAGACAACTTTCCT+AGG | - | chr3_3:64648017-64648036 | None:intergenic | 50.0% | |
| GACGATGCTAGCTAGGGATT+TGG | - | chr3_3:64648463-64648482 | None:intergenic | 50.0% | |
| TTGATTCCATCCAGCCCTGA+TGG | + | chr3_3:64648761-64648780 | Msa0464590:intron | 50.0% | |
| AGTCAAACTGGCGTCCATCA+GGG | - | chr3_3:64648778-64648797 | None:intergenic | 50.0% | |
| GTGGCCTATGTCTTGAACAC+CGG | - | chr3_3:64648837-64648856 | None:intergenic | 50.0% | |
| TCATTCTTGGCGTCCTTCAG+TGG | - | chr3_3:64649228-64649247 | None:intergenic | 50.0% | |
| GTTGGTCAAATCCCTACAGG+TGG | + | chr3_3:64649446-64649465 | Msa0464590:CDS | 50.0% | |
| CCAGAGCCACTATTGGAGAT+AGG | - | chr3_3:64649665-64649684 | None:intergenic | 50.0% | |
| CCTATCTCCAATAGTGGCTC+TGG | + | chr3_3:64649662-64649681 | Msa0464590:CDS | 50.0% | |
| TGTTCCCCATGGAAATGAGC+AGG | + | chr3_3:64649784-64649803 | Msa0464590:CDS | 50.0% | |
| !! | CAGGTACATGTTGGTGGCAA+TGG | + | chr3_3:64649803-64649822 | Msa0464590:CDS | 50.0% |
| !! | ATGTTGGTGGCAATGGGCTT+GGG | + | chr3_3:64649810-64649829 | Msa0464590:CDS | 50.0% |
| ! | GTTTGCTGGTAGCAATCCAG+AGG | + | chr3_3:64649916-64649935 | Msa0464590:CDS | 50.0% |
| GAGAGAACATGGGATCCCAA+TGG | + | chr3_3:64650220-64650239 | Msa0464590:CDS | 50.0% | |
| CCAGACACAGATGCATCTTG+TGG | - | chr3_3:64650277-64650296 | None:intergenic | 50.0% | |
| CCACAAGATGCATCTGTGTC+TGG | + | chr3_3:64650274-64650293 | Msa0464590:CDS | 50.0% | |
| CTCGCAACTTCATCTGTTGG+AGG | - | chr3_3:64650352-64650371 | None:intergenic | 50.0% | |
| TGGTTGCATGAAACCTCAGC+TGG | + | chr3_3:64650552-64650571 | Msa0464590:CDS | 50.0% | |
| GGTTGCATGAAACCTCAGCT+GGG | + | chr3_3:64650553-64650572 | Msa0464590:CDS | 50.0% | |
| TGCATCTCCTACAGTCATGC+AGG | + | chr3_3:64650615-64650634 | Msa0464590:CDS | 50.0% | |
| GCATCTCCTACAGTCATGCA+GGG | + | chr3_3:64650616-64650635 | Msa0464590:CDS | 50.0% | |
| CATCTCCTACAGTCATGCAG+GGG | + | chr3_3:64650617-64650636 | Msa0464590:CDS | 50.0% | |
| GATATCCCCTGCATGACTGT+AGG | - | chr3_3:64650625-64650644 | None:intergenic | 50.0% | |
| TCAGAATCTGTTCCTCCTGG+TGG | + | chr3_3:64650643-64650662 | Msa0464590:CDS | 50.0% | |
| GAAAACCCATGGAGTCGGTT+TGG | - | chr3_3:64650768-64650787 | None:intergenic | 50.0% | |
| CAGTAAAGGAGGAGGGAAAC+AGG | - | chr3_3:64651391-64651410 | None:intergenic | 50.0% | |
| AATTCAGCTGATCGTGCTGG+TGG | + | chr3_3:64651472-64651491 | Msa0464590:three_prime_UTR | 50.0% | |
| AATTCCCGAGGTTACTGTGC+AGG | + | chr3_3:64651501-64651520 | Msa0464590:three_prime_UTR | 50.0% | |
| AGAACCTGCACAGTAACCTC+GGG | - | chr3_3:64651508-64651527 | None:intergenic | 50.0% | |
| CAGAACCTGCACAGTAACCT+CGG | - | chr3_3:64651509-64651528 | None:intergenic | 50.0% | |
| ATCGAAGCGACGGTTACGAG+CGG | - | chr3_3:64644777-64644796 | None:intergenic | 55.0% | |
| CGGAATCGTCATCGAAGCGA+CGG | - | chr3_3:64644787-64644806 | None:intergenic | 55.0% | |
| !! | TCAATGAGAGTGCCGGTAGC+CGG | + | chr3_3:64644834-64644853 | Msa0464590:CDS | 55.0% |
| GAAACCGAACTCTTCCGCTC+CGG | + | chr3_3:64644886-64644905 | Msa0464590:CDS | 55.0% | |
| !! | TTCGGTGTTGAAGCGCTTCG+TGG | + | chr3_3:64644997-64645016 | Msa0464590:intron | 55.0% |
| GTGGTGTGGAGTCAAGTCAG+AGG | + | chr3_3:64645091-64645110 | Msa0464590:CDS | 55.0% | |
| ACTGGAGTCACGTCCCTACT+AGG | - | chr3_3:64645135-64645154 | None:intergenic | 55.0% | |
| CGTTTCCATCGCCTCACAGA+TGG | - | chr3_3:64645175-64645194 | None:intergenic | 55.0% | |
| GGTGGATGCGGATACGGAAA+TGG | + | chr3_3:64645209-64645228 | Msa0464590:CDS | 55.0% | |
| GTGGAGTTTGGGCGAGTGAT+AGG | + | chr3_3:64645358-64645377 | Msa0464590:CDS | 55.0% | |
| GGGCGAGTGATAGGAAGAAG+AGG | + | chr3_3:64645367-64645386 | Msa0464590:CDS | 55.0% | |
| !! | AGCCTAGGGCATCGGATCAA+TGG | + | chr3_3:64646334-64646353 | Msa0464590:intron | 55.0% |
| AGCCATTGATCCGATGCCCT+AGG | - | chr3_3:64646339-64646358 | None:intergenic | 55.0% | |
| TCAACACACCCCTCCCAGTT+AGG | + | chr3_3:64646985-64647004 | Msa0464590:intron | 55.0% | |
| TATAAAGGAAGGGGCTGGGG+TGG | + | chr3_3:64647960-64647979 | Msa0464590:intron | 55.0% | |
| GAGTCAAACTGGCGTCCATC+AGG | - | chr3_3:64648779-64648798 | None:intergenic | 55.0% | |
| GTTGCTCACGTTCCTACAGG+TGG | + | chr3_3:64649015-64649034 | Msa0464590:CDS | 55.0% | |
| TGATGTTGGGCCACCACTGA+AGG | + | chr3_3:64649212-64649231 | Msa0464590:CDS | 55.0% | |
| TTCTTGGCGTCCTTCAGTGG+TGG | - | chr3_3:64649225-64649244 | None:intergenic | 55.0% | |
| !! | CATGTTGGTGGCAATGGGCT+TGG | + | chr3_3:64649809-64649828 | Msa0464590:CDS | 55.0% |
| TGGGCCTTCCTCCACATTAG+TGG | + | chr3_3:64649829-64649848 | Msa0464590:CDS | 55.0% | |
| !! | TCTTAGCTCTGTGGTGGGCA+TGG | + | chr3_3:64649949-64649968 | Msa0464590:CDS | 55.0% |
| !! | GTGGTGGGCATGGAGCAAAA+TGG | + | chr3_3:64649959-64649978 | Msa0464590:CDS | 55.0% |
| GTGGGCATGGAGCAAAATGG+TGG | + | chr3_3:64649962-64649981 | Msa0464590:CDS | 55.0% | |
| TGTGCTGAAGGACTCTGCTG+AGG | + | chr3_3:64650156-64650175 | Msa0464590:CDS | 55.0% | |
| GTGCTGAAGGACTCTGCTGA+GGG | + | chr3_3:64650157-64650176 | Msa0464590:CDS | 55.0% | |
| TGGTGGCTTCTCAATTCCCG+AGG | + | chr3_3:64651489-64651508 | Msa0464590:three_prime_UTR | 55.0% | |
| CGAGGTTACTGTGCAGGTTC+TGG | + | chr3_3:64651507-64651526 | Msa0464590:three_prime_UTR | 55.0% | |
| ! | TCTGAGCTCTGGCAAGAAGC+AGG | - | chr3_3:64651545-64651564 | None:intergenic | 55.0% |
| GCTTCTTGCCAGAGCTCAGA+CGG | + | chr3_3:64651545-64651564 | Msa0464590:three_prime_UTR | 55.0% | |
| CGAAACCGCAACGGTTACGG+CGG | + | chr3_3:64644658-64644677 | Msa0464590:CDS | 60.0% | |
| GGAACCGGAGCGGAAGAGTT+CGG | - | chr3_3:64644893-64644912 | None:intergenic | 60.0% | |
| GAAACAGGAGCAACGGGAGC+AGG | - | chr3_3:64644914-64644933 | None:intergenic | 60.0% | |
| ! | GGTGTTGAAGCGCTTCGTGG+CGG | + | chr3_3:64645000-64645019 | Msa0464590:intron | 60.0% |
| ! | GTGTTGAAGCGCTTCGTGGC+GGG | + | chr3_3:64645001-64645020 | Msa0464590:intron | 60.0% |
| AGTCAGAGGAAGCGGAAGCG+TGG | + | chr3_3:64645105-64645124 | Msa0464590:CDS | 60.0% | |
| ! | GTCAGAGGAAGCGGAAGCGT+GGG | + | chr3_3:64645106-64645125 | Msa0464590:CDS | 60.0% |
| TAGGGACGTGACTCCAGTCC+CGG | + | chr3_3:64645137-64645156 | Msa0464590:CDS | 60.0% | |
| !! | GCTAAAGGTGTCTCCGGGAC+TGG | - | chr3_3:64645153-64645172 | None:intergenic | 60.0% |
| TGATGCGGGGGATCCGTTTG+TGG | + | chr3_3:64645266-64645285 | Msa0464590:CDS | 60.0% | |
| AAACTGGCGTCCATCAGGGC+TGG | - | chr3_3:64648774-64648793 | None:intergenic | 60.0% | |
| !! | AGCAGCAGGGTGCTGATTCC+CGG | - | chr3_3:64650470-64650489 | None:intergenic | 60.0% |
| GGCTTCCGCCGTAACCGTTG+CGG | - | chr3_3:64644666-64644685 | None:intergenic | 65.0% | |
| GAAGCGACGGTTACGAGCGG+TGG | - | chr3_3:64644774-64644793 | None:intergenic | 65.0% | |
| AACGGGAGCAGGAACCGGAG+CGG | - | chr3_3:64644903-64644922 | None:intergenic | 65.0% | |
| GGAGCAACGGGAGCAGGAAC+CGG | - | chr3_3:64644908-64644927 | None:intergenic | 65.0% | |
| ! | AGAGGAAGCGGAAGCGTGGG+CGG | + | chr3_3:64645109-64645128 | Msa0464590:CDS | 65.0% |
| GAAGCGTGGGCGGCCTAGTA+GGG | + | chr3_3:64645119-64645138 | Msa0464590:CDS | 65.0% | |
| TGCGGGGGATCCGTTTGTGG+AGG | + | chr3_3:64645269-64645288 | Msa0464590:CDS | 65.0% | |
| TGGCGTCCATCAGGGCTGGA+TGG | - | chr3_3:64648770-64648789 | None:intergenic | 65.0% | |
| ! | GGAAGCGTGGGCGGCCTAGT+AGG | + | chr3_3:64645118-64645137 | Msa0464590:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 64644641 | 64651812 | 64644641 | ID=Msa0464590;Name=Msa0464590 |
| chr3_3 | mRNA | 64644641 | 64651812 | 64644641 | ID=Msa0464590-mRNA-1;Parent=Msa0464590;Name=Msa0464590-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.8|0.66|1|0.8|0.66|6|493|860 |
| chr3_3 | exon | 64644641 | 64645000 | 64644641 | ID=Msa0464590-mRNA-1:exon:14231;Parent=Msa0464590-mRNA-1 |
| chr3_3 | exon | 64645078 | 64645502 | 64645078 | ID=Msa0464590-mRNA-1:exon:14232;Parent=Msa0464590-mRNA-1 |
| chr3_3 | exon | 64648775 | 64648922 | 64648775 | ID=Msa0464590-mRNA-1:exon:14233;Parent=Msa0464590-mRNA-1 |
| chr3_3 | exon | 64649009 | 64649296 | 64649009 | ID=Msa0464590-mRNA-1:exon:14234;Parent=Msa0464590-mRNA-1 |
| chr3_3 | exon | 64649440 | 64650921 | 64649440 | ID=Msa0464590-mRNA-1:exon:14235;Parent=Msa0464590-mRNA-1 |
| chr3_3 | exon | 64651440 | 64651812 | 64651440 | ID=Msa0464590-mRNA-1:exon:14236;Parent=Msa0464590-mRNA-1 |
| chr3_3 | CDS | 64644641 | 64645000 | 64644641 | ID=Msa0464590-mRNA-1:cds;Parent=Msa0464590-mRNA-1 |
| chr3_3 | CDS | 64645078 | 64645502 | 64645078 | ID=Msa0464590-mRNA-1:cds;Parent=Msa0464590-mRNA-1 |
| chr3_3 | CDS | 64648775 | 64648922 | 64648775 | ID=Msa0464590-mRNA-1:cds;Parent=Msa0464590-mRNA-1 |
| chr3_3 | CDS | 64649009 | 64649296 | 64649009 | ID=Msa0464590-mRNA-1:cds;Parent=Msa0464590-mRNA-1 |
| chr3_3 | CDS | 64649440 | 64650801 | 64649440 | ID=Msa0464590-mRNA-1:cds;Parent=Msa0464590-mRNA-1 |
| chr3_3 | three_prime_UTR | 64650802 | 64650921 | 64650802 | ID=Msa0464590-mRNA-1:three_prime_utr;Parent=Msa0464590-mRNA-1 |
| chr3_3 | three_prime_UTR | 64651440 | 64651812 | 64651440 | ID=Msa0464590-mRNA-1:three_prime_utr;Parent=Msa0464590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
