AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0708250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0708250 MtrunA17_Chr8g0391081 96.937 751 22 1 1 751 1 750 0.0 1511
Msa0708250 MtrunA17_Chr2g0330101 88.740 373 42 0 343 715 236 608 0.0 697
Msa0708250 MtrunA17_Chr2g0330101 74.157 267 49 6 1 264 1 250 1.09e-110 349
Msa0708250 MtrunA17_Chr1g0202791 36.404 228 124 8 479 685 671 898 1.73e-34 141
Msa0708250 MtrunA17_Chr4g0011651 58.993 139 37 5 608 742 36 158 5.54e-31 119
Msa0708250 MtrunA17_Chr4g0011661 68.116 69 21 1 127 195 427 494 5.28e-18 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0708250 AT4G10760.1 62.102 723 212 14 1 709 1 675 0.0 835
Msa0708250 AT4G09980.1 36.842 209 97 10 492 672 617 818 1.01e-29 127
Msa0708250 AT4G09980.2 36.646 161 69 9 492 626 617 770 3.46e-19 93.2

Find 241 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATTCAATCTTGTGATTT+TGG 0.102667 4_4:+81737395 Msa0708250:three_prime_UTR
TCTTCACACTGACATTAATT+TGG 0.133595 4_4:+81735503 Msa0708250:CDS
ATGCAATTTGTTGATGATTT+AGG 0.135273 4_4:-81733202 None:intergenic
AACTCCAGCTTTCTTGTTCT+TGG 0.173669 4_4:-81736749 None:intergenic
AAACGATTTCTTATTAATTA+TGG 0.188364 4_4:-81734938 None:intergenic
CAAAAGCTCCTTCCCAGTTT+TGG 0.206665 4_4:-81734977 None:intergenic
CAAAACTGGGAAGGAGCTTT+TGG 0.212324 4_4:+81734978 Msa0708250:CDS
CATGCCATCCTCGCCTAAAT+TGG 0.213824 4_4:-81737508 None:intergenic
CAAGAGCTTGGTGGAGATTC+AGG 0.227375 4_4:+81734376 Msa0708250:CDS
TGCTGATGATGTGCAGTTTC+AGG 0.229462 4_4:-81734541 None:intergenic
AGCGGATACGACGGAATTTC+TGG 0.229632 4_4:-81733295 None:intergenic
TTCCTTTGTTGCATGTAATA+AGG 0.232272 4_4:+81735264 Msa0708250:CDS
CTGGCTTTCGGCTTGTTTCC+CGG 0.250664 4_4:-81736364 None:intergenic
AGGGCTCCGGGCAAGGTTTA+AGG 0.251354 4_4:+81737168 Msa0708250:CDS
TGCAATTTGTTGATGATTTA+GGG 0.267696 4_4:-81733201 None:intergenic
GGACTAACTTTCTCTGGTTC+TGG 0.277054 4_4:-81734220 None:intergenic
GTTCTGCAGCTTAGAACTTT+GGG 0.278577 4_4:+81736166 Msa0708250:intron
TCAATGTTTCTGTTTACTTC+AGG 0.279018 4_4:-81736317 None:intergenic
TAGTTGTTGGAGAGATGATT+TGG 0.285422 4_4:-81734128 None:intergenic
AAGTGGCAAATCAAGAATTA+TGG 0.290975 4_4:+81734480 Msa0708250:CDS
TAAACAGTATTAAAGATATA+AGG 0.292936 4_4:+81733918 Msa0708250:CDS
TTGGTTAGAGGAGGAGGGAG+AGG 0.295638 4_4:-81734094 None:intergenic
TTATTATTATTGTTATTAGA+TGG 0.306822 4_4:-81734160 None:intergenic
ATGGACATATTAGGTAAGTT+TGG 0.307068 4_4:+81735834 Msa0708250:CDS
TGATTTGGGAGGGTTGAAAT+TGG 0.307517 4_4:-81734113 None:intergenic
CTTCACACTGACATTAATTT+GGG 0.322824 4_4:+81735504 Msa0708250:CDS
ACATTGTCTCGTTGGGATAA+AGG 0.328785 4_4:+81736289 Msa0708250:CDS
AATTAATAAGAAATCGTTTA+GGG 0.330568 4_4:+81734942 Msa0708250:CDS
GCAGATTGCGCATTGCGTTC+TGG 0.333782 4_4:+81733334 Msa0708250:five_prime_UTR
GAAGAATCGATAGGTGAAAA+AGG 0.339772 4_4:-81734292 None:intergenic
GGTTAGAGGAGGAGGGAGAG+GGG 0.349674 4_4:-81734092 None:intergenic
AACTTTAGAATGGACATATT+AGG 0.350332 4_4:+81735825 Msa0708250:CDS
CCTACAGATGTATCCTTTGT+TGG 0.351656 4_4:+81736715 Msa0708250:intron
ATGTTATTGTCGCTGAAGTC+CGG 0.351884 4_4:+81736345 Msa0708250:CDS
AGGTAAGTTTGGAGTAATAA+TGG 0.355596 4_4:+81735845 Msa0708250:CDS
TACAAACCTCATCTGGCTTT+CGG 0.356515 4_4:-81736376 None:intergenic
ATCCACATATTATCAGATAT+TGG 0.357745 4_4:-81734685 None:intergenic
AGCTATTATGTTAAAGCATA+TGG 0.358718 4_4:+81737577 Msa0708250:three_prime_UTR
TAATTAATAAGAAATCGTTT+AGG 0.360783 4_4:+81734941 Msa0708250:CDS
GTCATTGTTGGAGGCAAATC+AGG 0.363716 4_4:-81735699 None:intergenic
TTTGTCCATTGTTCGATCAA+TGG 0.364589 4_4:+81734243 Msa0708250:CDS
CCTGATGCATTTGGCCCCAT+TGG 0.368136 4_4:-81734838 None:intergenic
TCAGATATTGGCCTCAAAAC+TGG 0.369495 4_4:-81734673 None:intergenic
GCTGGCTGCACCTCCACATC+TGG 0.374605 4_4:-81737199 None:intergenic
ATTCACATGGAGCTGCCTTA+TGG 0.374787 4_4:+81735885 Msa0708250:CDS
TTGAAATTGGTTAGAGGAGG+AGG 0.385773 4_4:-81734100 None:intergenic
ATACTACTCCCTGATGCATT+TGG 0.386322 4_4:-81734847 None:intergenic
TTTGATTCTGTGCCGGCAAA+TGG 0.388149 4_4:-81737283 None:intergenic
ATGCGCAATCTGCAGGTTGC+TGG 0.390191 4_4:-81733324 None:intergenic
TACGAATGTGAACGGTGTTA+TGG 0.391087 4_4:+81734636 Msa0708250:CDS
CCAATGGGGCCAAATGCATC+AGG 0.394774 4_4:+81734838 Msa0708250:CDS
GTTAGAGGAGGAGGGAGAGG+GGG 0.398246 4_4:-81734091 None:intergenic
AAGGGGAGCACCAGGACTAA+TGG 0.400519 4_4:+81734765 Msa0708250:CDS
TGTTCTGCAGCTTAGAACTT+TGG 0.401119 4_4:+81736165 Msa0708250:intron
CTGATGCATTTGGCCCCATT+GGG 0.404173 4_4:-81734837 None:intergenic
CATTGTCTCGTTGGGATAAA+GGG 0.407308 4_4:+81736290 Msa0708250:CDS
AAAACTTATCTTTCGACAAA+AGG 0.409405 4_4:-81737477 None:intergenic
GAGGTAGTTGCTGGAGCTGC+AGG 0.410049 4_4:-81737319 None:intergenic
AACGTGTTGAGGAGATCATT+TGG 0.410386 4_4:+81736195 Msa0708250:CDS
GTCCATGTGTGACTTGTGTT+GGG 0.410770 4_4:-81733966 None:intergenic
TCTGAAGCAGAGGTAGTTGC+TGG 0.411602 4_4:-81737328 None:intergenic
AGCCCATGAGTTTGCAGAGC+AGG 0.414246 4_4:-81735945 None:intergenic
CCAAAATCACAAGATTGAAT+TGG 0.418008 4_4:-81737395 None:intergenic
AGTTGTTGGAGAGATGATTT+GGG 0.424142 4_4:-81734127 None:intergenic
GAAGTGCGGCTTTGTCTTGT+GGG 0.425412 4_4:-81734354 None:intergenic
GACAAAGGACTAACTTTCTC+TGG 0.426951 4_4:-81734226 None:intergenic
GGCGAGGAGGAACTCCGGTT+GGG 0.427175 4_4:-81733259 None:intergenic
TGATAATGGTGCTGTTGAAT+TGG 0.428292 4_4:+81734444 Msa0708250:CDS
GGAGGGTTGAAATTGGTTAG+AGG 0.430503 4_4:-81734106 None:intergenic
AATATCATACAAACCTCATC+TGG 0.432294 4_4:-81736383 None:intergenic
GGATTTGAAGGAGGATTTGA+AGG 0.434804 4_4:+81734906 Msa0708250:CDS
AAGAGAGAACTTTGAGAGAA+AGG 0.436417 4_4:-81734039 None:intergenic
AACATATGATGAGGATTTGA+AGG 0.436636 4_4:+81734894 Msa0708250:CDS
AGGGGAGCACCAGGACTAAT+GGG 0.437278 4_4:+81734766 Msa0708250:CDS
AATCAGCAACAAATTGTTAC+CGG 0.437871 4_4:+81734610 Msa0708250:CDS
GAAGCTCTGGGAGGTGATGC+TGG 0.437897 4_4:-81737217 None:intergenic
TCCATCAGGTGGATGTCTCT+TGG 0.438754 4_4:+81737112 Msa0708250:intron
CTTCAGCGAATAATTAGAAC+TGG 0.443807 4_4:+81736233 Msa0708250:CDS
CGCATGCACAATACTCATGC+AGG 0.450816 4_4:+81736779 Msa0708250:CDS
TATTATTATTGTTATTAGAT+GGG 0.453292 4_4:-81734159 None:intergenic
CAAAACTAAAGGTGGTTCTC+AGG 0.453729 4_4:+81735189 Msa0708250:CDS
ATTAGTCCTGGTGCTCCCCT+TGG 0.455247 4_4:-81734763 None:intergenic
TGGTTAGAGGAGGAGGGAGA+GGG 0.456439 4_4:-81734093 None:intergenic
ACTGGGCGTGCAATGGAACT+TGG 0.457336 4_4:+81735984 Msa0708250:CDS
ACGTGTTGAGGAGATCATTT+GGG 0.459103 4_4:+81736196 Msa0708250:CDS
GGAAGAGCACCCGTCATTGT+TGG 0.459406 4_4:-81735711 None:intergenic
TGTCCATGTGTGACTTGTGT+TGG 0.459846 4_4:-81733967 None:intergenic
TGAAGTGCGGCTTTGTCTTG+TGG 0.459966 4_4:-81734355 None:intergenic
GTAATCAATTGAGTGGTGTA+AGG 0.460248 4_4:+81737134 Msa0708250:CDS
GTCCCTGCTCTGCAAACTCA+TGG 0.461369 4_4:+81735942 Msa0708250:CDS
TACCTCCATAGCAGAAGCTC+TGG 0.463090 4_4:-81737230 None:intergenic
CAATCTGCAGGTTGCTGGTA+CGG 0.463383 4_4:-81733319 None:intergenic
GAACGCAATGCGCAATCTGC+AGG 0.467304 4_4:-81733331 None:intergenic
TGTTATTGTCGCTGAAGTCC+GGG 0.470963 4_4:+81736346 Msa0708250:CDS
GGTGTAAGGTTAGTAGATGA+AGG 0.473146 4_4:+81737148 Msa0708250:CDS
TCATCCGCCATTGTTCCATA+AGG 0.473808 4_4:-81735900 None:intergenic
TGAGATAGCTTTGAGGTCAA+TGG 0.473950 4_4:+81734417 Msa0708250:CDS
TTTAGTGGTTTGGGAGGAGG+AGG 0.474535 4_4:-81735732 None:intergenic
GGAGGATTTGAAGGAATTTG+AGG 0.475346 4_4:+81734915 Msa0708250:CDS
CATGGTGACCCTCACATGCC+AGG 0.476689 4_4:+81734712 Msa0708250:CDS
TACTGACAAAAGAAGATTGT+CGG 0.476988 4_4:+81735230 Msa0708250:CDS
CGGCGAGGAGGAACTCCGGT+TGG 0.477929 4_4:-81733260 None:intergenic
TTGGAAGAGTTTGTTGTAAG+TGG 0.480573 4_4:+81734463 Msa0708250:CDS
TTGGAGGCAAATCAGGTGTT+GGG 0.482818 4_4:-81735692 None:intergenic
GGAATTTCTGGCAGGTTGTA+CGG 0.486255 4_4:-81733283 None:intergenic
CTCTAATTTCCACAATAAAG+TGG 0.486926 4_4:-81734314 None:intergenic
GCAAGGAACATTGTCTCGTT+GGG 0.488417 4_4:+81736282 Msa0708250:CDS
GGTGGACCAAGGGGAGCACC+AGG 0.488435 4_4:+81734757 Msa0708250:CDS
TCGAGAGAAGAAACAAGATT+AGG 0.490915 4_4:-81734016 None:intergenic
ACGAATGTGAACGGTGTTAT+GGG 0.492726 4_4:+81734637 Msa0708250:CDS
AGCAAGGAACATTGTCTCGT+TGG 0.492982 4_4:+81736281 Msa0708250:CDS
TCGATTCTTCCACTTTATTG+TGG 0.494730 4_4:+81734305 Msa0708250:CDS
AGGAAATTCTCTCAAGAGAC+GGG 0.498335 4_4:-81734521 None:intergenic
GTTGGAGGCAAATCAGGTGT+TGG 0.499785 4_4:-81735693 None:intergenic
TTGCAGTTGAGATAGCTTTG+AGG 0.500063 4_4:+81734410 Msa0708250:CDS
GGTTAGTAGATGAAGGGCTC+CGG 0.501225 4_4:+81737155 Msa0708250:CDS
AAGCTGCCTTAAACCTTGCC+CGG 0.508156 4_4:-81737174 None:intergenic
GCCACCATTCCCATTAGTCC+TGG 0.508841 4_4:-81734775 None:intergenic
TGATATACGTAACTTTAGAA+TGG 0.511986 4_4:+81735815 Msa0708250:CDS
CAATGGAACTTGGACGAGAA+TGG 0.512197 4_4:+81735994 Msa0708250:CDS
CAAACAAGGAGTCCATTTGC+CGG 0.513249 4_4:+81737271 Msa0708250:CDS
AGGTCAATGGCAGATGATAA+TGG 0.515834 4_4:+81734430 Msa0708250:CDS
ATTACATGCAACAAAGGAAC+CGG 0.517086 4_4:-81735260 None:intergenic
ACCTCCCAGAGCTTCTGCTA+TGG 0.519159 4_4:+81737225 Msa0708250:CDS
GGAGGCTGCTGTAGCTGCTA+AGG 0.521508 4_4:+81735026 Msa0708250:CDS
TTCATCTGTCTCCATGTCCA+TGG 0.524541 4_4:-81733891 None:intergenic
AGAAACAAGATTAGGTATAA+CGG 0.527093 4_4:-81734008 None:intergenic
TGAAATTGGTTAGAGGAGGA+GGG 0.528227 4_4:-81734099 None:intergenic
GAACTGGACGTACCGGCCAT+TGG 0.528330 4_4:+81736249 Msa0708250:CDS
TAGATGAAGGGCTCCGGGCA+AGG 0.528369 4_4:+81737161 Msa0708250:CDS
GAAATTAGAGAATGATCAAA+CGG 0.530977 4_4:+81734327 Msa0708250:CDS
ATGGGTCACTGGGCGTGCAA+TGG 0.534615 4_4:+81735977 Msa0708250:CDS
GTGTTATGGGTGCGATGGGA+AGG 0.535530 4_4:+81734650 Msa0708250:CDS
TGTTGTAACCCTGGCATGTG+AGG 0.536663 4_4:-81734721 None:intergenic
ACCGTTCACATTCGTACTAC+CGG 0.536843 4_4:-81734629 None:intergenic
TGGAGCTGCAGGCTCAGCAG+TGG 0.537586 4_4:-81737308 None:intergenic
TATTGTTCTGAAGTGGAACT+TGG 0.540692 4_4:+81735771 Msa0708250:CDS
ACCTCCATAGCAGAAGCTCT+GGG 0.541229 4_4:-81737229 None:intergenic
TTCTGCAGCTTAGAACTTTG+GGG 0.541495 4_4:+81736167 Msa0708250:intron
TTTCAGTTCAAAACTAAAGG+TGG 0.543137 4_4:+81735181 Msa0708250:intron
TCGATGCATAGACTCCCAAT+GGG 0.544568 4_4:+81734823 Msa0708250:CDS
AAGTCCAAGAACAAGAAAGC+TGG 0.545396 4_4:+81736745 Msa0708250:CDS
CAGGAAATTCTCTCAAGAGA+CGG 0.546521 4_4:-81734522 None:intergenic
AGTGGACTTTGATTCTGTGC+CGG 0.547243 4_4:-81737290 None:intergenic
GCCCATGAGTTTGCAGAGCA+GGG 0.549976 4_4:-81735944 None:intergenic
CCTTGCTGTGATTGAGCCAA+TGG 0.550898 4_4:-81736265 None:intergenic
TGATACTTGCCGGCACATGA+AGG 0.552189 4_4:+81735542 Msa0708250:CDS
AACCTTATTACATGCAACAA+AGG 0.554312 4_4:-81735266 None:intergenic
TACCTCTGCTTCAGAGGAGA+AGG 0.555640 4_4:+81737336 Msa0708250:CDS
AGCAACTACCTCTGCTTCAG+AGG 0.556384 4_4:+81737330 Msa0708250:CDS
GTTAGTAGATGAAGGGCTCC+GGG 0.556464 4_4:+81737156 Msa0708250:CDS
CTAGTGTTGCTGCTCAAACA+AGG 0.557349 4_4:+81737257 Msa0708250:CDS
GCAGGTTGCTGGTACGGAAG+CGG 0.558436 4_4:-81733313 None:intergenic
CGCCTTCTCCTCTGAAGCAG+AGG 0.558503 4_4:-81737338 None:intergenic
AATCCGTCATTCATCATCCA+TGG 0.558704 4_4:+81733874 Msa0708250:exon
GATTTGCCTCCAACAATGAC+GGG 0.559012 4_4:+81735702 Msa0708250:CDS
TGATTTGCCTCCAACAATGA+CGG 0.559920 4_4:+81735701 Msa0708250:CDS
GCCGCACTTCAAGAGCTTGG+TGG 0.560349 4_4:+81734367 Msa0708250:CDS
ATGCAACAAAGGAACCGGTC+TGG 0.562968 4_4:-81735255 None:intergenic
ATGGACATGGAGACAGATGA+AGG 0.563255 4_4:+81733893 Msa0708250:CDS
AAAGCCGCACTTCAAGAGCT+TGG 0.563478 4_4:+81734364 Msa0708250:CDS
AGATGTATCCTTTGTTGGAG+AGG 0.564060 4_4:+81736720 Msa0708250:intron
TCCCTGCTCTGCAAACTCAT+GGG 0.567481 4_4:+81735943 Msa0708250:CDS
GTCGATGCATAGACTCCCAA+TGG 0.568518 4_4:+81734822 Msa0708250:CDS
TAATTCAGAAACCGACTGCA+AGG 0.568694 4_4:+81735004 Msa0708250:CDS
TCCCAGAGCTTCTGCTATGG+AGG 0.570843 4_4:+81737228 Msa0708250:CDS
ATAATTAGAACTGGACGTAC+CGG 0.573648 4_4:+81736242 Msa0708250:CDS
ATATCCAATTTAGGCGAGGA+TGG 0.574833 4_4:+81737504 Msa0708250:three_prime_UTR
GGACTTATCCTCTCCAACAA+AGG 0.574976 4_4:-81736728 None:intergenic
AGAGCACCCGTCATTGTTGG+AGG 0.575957 4_4:-81735708 None:intergenic
ATTTCGCCGGAAAACCCAAC+CGG 0.576060 4_4:+81733245 Msa0708250:five_prime_UTR
AAAACTATACCTTCATGTGC+CGG 0.576520 4_4:-81735551 None:intergenic
TGCTGAGTATTGTTCTGAAG+TGG 0.577108 4_4:+81735764 Msa0708250:CDS
GAAGATTGTCGGCGCCAGAC+CGG 0.578527 4_4:+81735241 Msa0708250:CDS
TTGGGGATATAAACGTGTTG+AGG 0.580037 4_4:+81736184 Msa0708250:CDS
TCATTCATCATCCATGGACA+TGG 0.582837 4_4:+81733880 Msa0708250:exon
GATACGACGGAATTTCTGGC+AGG 0.583168 4_4:-81733291 None:intergenic
GTTGGAGAGATGATTTGGGA+GGG 0.585847 4_4:-81734123 None:intergenic
GAAAACATTTGTTGTAACCC+TGG 0.587202 4_4:-81734730 None:intergenic
CTGCAAAATGAGTCGAGTCT+CGG 0.587219 4_4:+81734568 Msa0708250:CDS
TGTTGGAGAGATGATTTGGG+AGG 0.587473 4_4:-81734124 None:intergenic
AACGGTGTTATGGGTGCGAT+GGG 0.589195 4_4:+81734646 Msa0708250:CDS
AGCTCCATGTGAATGTCCCA+CGG 0.591825 4_4:-81735876 None:intergenic
GGGTTGAAATTGGTTAGAGG+AGG 0.594680 4_4:-81734103 None:intergenic
ACAGCAGCCTCCCTTGCAGT+CGG 0.595205 4_4:-81735015 None:intergenic
GGCCAATATCTGATAATATG+TGG 0.595717 4_4:+81734683 Msa0708250:CDS
TGGATTTGTAGTAACAAGAG+AGG 0.598681 4_4:-81734200 None:intergenic
TGCTTCAGAGGAGAAGGCGA+TGG 0.599051 4_4:+81737342 Msa0708250:CDS
AATTCAGAAACCGACTGCAA+GGG 0.599279 4_4:+81735005 Msa0708250:CDS
ATATGATGAGGATTTGAAGG+AGG 0.602934 4_4:+81734897 Msa0708250:CDS
AATGAGTCGAGTCTCGGAGA+TGG 0.610218 4_4:+81734574 Msa0708250:CDS
GAACGGTGTTATGGGTGCGA+TGG 0.610270 4_4:+81734645 Msa0708250:CDS
AATAAAGTGGAAGAATCGAT+AGG 0.611650 4_4:-81734301 None:intergenic
TGGAATATCCAATTTAGGCG+AGG 0.612031 4_4:+81737500 Msa0708250:three_prime_UTR
GCTGTGATTGAGCCAATGGC+CGG 0.612866 4_4:-81736261 None:intergenic
GCTATCTCAACTGCAAGTGT+CGG 0.614104 4_4:-81734403 None:intergenic
TCAGAAACCGACTGCAAGGG+AGG 0.615637 4_4:+81735008 Msa0708250:CDS
GTGTAAGGTTAGTAGATGAA+GGG 0.616229 4_4:+81737149 Msa0708250:CDS
ACGAAGAGAACTCATTTCGC+CGG 0.618043 4_4:+81733232 Msa0708250:five_prime_UTR
ACCAGGACTAATGGGAATGG+TGG 0.620913 4_4:+81734774 Msa0708250:CDS
TCCACCAAGCTCTTGAAGTG+CGG 0.621188 4_4:-81734368 None:intergenic
GGGGTGTAGGAGCAAAAGGA+CGG 0.622151 4_4:-81734072 None:intergenic
TAAGGCAGCTTATCCAGATG+TGG 0.624770 4_4:+81737186 Msa0708250:CDS
AAGTGCGGCTTTGTCTTGTG+GGG 0.628317 4_4:-81734353 None:intergenic
TCCACCGTGGGACATTCACA+TGG 0.629581 4_4:+81735872 Msa0708250:CDS
AGCACCAGGACTAATGGGAA+TGG 0.630132 4_4:+81734771 Msa0708250:CDS
CAGGTTGTACGGCGGCGAGG+AGG 0.631050 4_4:-81733272 None:intergenic
GTTGTAACCCTGGCATGTGA+GGG 0.632048 4_4:-81734720 None:intergenic
GGCAGCTTATCCAGATGTGG+AGG 0.633458 4_4:+81737189 Msa0708250:CDS
AACAAGCCGAAAGCCAGATG+AGG 0.634395 4_4:+81736370 Msa0708250:CDS
AACCCAACACAAGTCACACA+TGG 0.635557 4_4:+81733964 Msa0708250:CDS
ATGGTGACCCTCACATGCCA+GGG 0.636181 4_4:+81734713 Msa0708250:CDS
GGAGCTGCCTTATGGAACAA+TGG 0.639552 4_4:+81735893 Msa0708250:CDS
TGGCAGGTTGTACGGCGGCG+AGG 0.644473 4_4:-81733275 None:intergenic
ATTGGGAGTCTATGCATCGA+CGG 0.645441 4_4:-81734820 None:intergenic
AGCAACCATTGATCGAACAA+TGG 0.647994 4_4:-81734248 None:intergenic
ACCGGTAGTACGAATGTGAA+CGG 0.648863 4_4:+81734628 Msa0708250:CDS
TGGAACTTGGTGAACCACAA+TGG 0.651413 4_4:+81735784 Msa0708250:CDS
CAATGGGGCCAAATGCATCA+GGG 0.654411 4_4:+81734839 Msa0708250:CDS
ATATCACAGTTGATCCATTG+TGG 0.655424 4_4:-81735798 None:intergenic
ACGGCGGCGAGGAGGAACTC+CGG 0.657921 4_4:-81733264 None:intergenic
GAGCTTGGTGGAGATTCAGG+AGG 0.664235 4_4:+81734379 Msa0708250:CDS
TCTCTTGGTAATCAATTGAG+TGG 0.668916 4_4:+81737127 Msa0708250:CDS
AATAATGGCTGATCCACCGT+GGG 0.670381 4_4:+81735860 Msa0708250:CDS
ATTGATCGAACAATGGACAA+AGG 0.673974 4_4:-81734241 None:intergenic
AGCTTGGTGGAGATTCAGGA+GGG 0.674512 4_4:+81734380 Msa0708250:CDS
GTGTAGGAGCAAAAGGACGG+TGG 0.675909 4_4:-81734069 None:intergenic
GCATGCACAATACTCATGCA+GGG 0.676682 4_4:+81736780 Msa0708250:CDS
GAAGGCGATGGTCATTGACG+TGG 0.682342 4_4:+81737354 Msa0708250:CDS
GATAATATGTGGATGTCACA+TGG 0.687376 4_4:+81734694 Msa0708250:CDS
GACTTCAGCGACAATAACAT+CGG 0.688010 4_4:-81736342 None:intergenic
TGTCCATGGATGATGAATGA+CGG 0.688031 4_4:-81733877 None:intergenic
ATTTCTGGCAGGTTGTACGG+CGG 0.688492 4_4:-81733280 None:intergenic
CCATTGGCTCAATCACAGCA+AGG 0.689265 4_4:+81736265 Msa0708250:CDS
TGGTACGGAAGCGGATACGA+CGG 0.690780 4_4:-81733304 None:intergenic
TAATAATGGCTGATCCACCG+TGG 0.701095 4_4:+81735859 Msa0708250:CDS
GGAATGGTGGCTGCACAGAG+AGG 0.707719 4_4:+81734787 Msa0708250:CDS
TCCATAGCAGAAGCTCTGGG+AGG 0.715829 4_4:-81737226 None:intergenic
CGATGCATAGACTCCCAATG+GGG 0.754255 4_4:+81734824 Msa0708250:CDS
GCTGCCTTATGGAACAATGG+CGG 0.761678 4_4:+81735896 Msa0708250:CDS
TCCATGTGAATGTCCCACGG+TGG 0.777302 4_4:-81735873 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTATTGTTATTAGAT+GGG - chr4_4:81734162-81734181 None:intergenic 10.0%
!!! TTATTATTATTGTTATTAGA+TGG - chr4_4:81734163-81734182 None:intergenic 10.0%
!! AATTATTCTCAAACAATTAT+TGG - chr4_4:81733593-81733612 None:intergenic 15.0%
!! TATAAATATGTTGTACTAAA+TGG + chr4_4:81733803-81733822 Msa0708250:intron 15.0%
!!! GAATTTTTATGTGTTTAATT+AGG + chr4_4:81733846-81733865 Msa0708250:intron 15.0%
!! TAAACAGTATTAAAGATATA+AGG + chr4_4:81733918-81733937 Msa0708250:CDS 15.0%
!! AAACGATTTCTTATTAATTA+TGG - chr4_4:81734941-81734960 None:intergenic 15.0%
!! TAATTAATAAGAAATCGTTT+AGG + chr4_4:81734941-81734960 Msa0708250:CDS 15.0%
!! AATTAATAAGAAATCGTTTA+GGG + chr4_4:81734942-81734961 Msa0708250:CDS 15.0%
!!! TCTTTTCAATAACATTTTTA+AGG - chr4_4:81736465-81736484 None:intergenic 15.0%
!! TAAAAATGTTATTGAAAAGA+AGG + chr4_4:81736465-81736484 Msa0708250:intron 15.0%
!! AAAAATGTTATTGAAAAGAA+GGG + chr4_4:81736466-81736485 Msa0708250:intron 15.0%
!! TAGTTAAACTATTTAAAAGA+TGG - chr4_4:81736604-81736623 None:intergenic 15.0%
!! TAATCTTAAAATTGTTTGAT+TGG + chr4_4:81736851-81736870 Msa0708250:intron 15.0%
!! AATCTTAAAATTGTTTGATT+GGG + chr4_4:81736852-81736871 Msa0708250:intron 15.0%
!!! AAATCATAAACTGTTTTTTA+TGG + chr4_4:81737021-81737040 Msa0708250:intron 15.0%
!! TCGAAAATTAAAGAATAAAG+AGG - chr4_4:81733375-81733394 None:intergenic 20.0%
!!! TCAATTTTTGTAACCAAAAT+AGG + chr4_4:81733411-81733430 Msa0708250:intron 20.0%
!! TTGATACTTGATACAAAATT+GGG + chr4_4:81733719-81733738 Msa0708250:intron 20.0%
!! TTTATGTGTTTAATTAGGAT+CGG + chr4_4:81733851-81733870 Msa0708250:intron 20.0%
!!! ATTTTTCAGTTCAAAACTAA+AGG + chr4_4:81735178-81735197 Msa0708250:intron 20.0%
!! ACTAATCAAACTATGAAAAT+TGG + chr4_4:81735399-81735418 Msa0708250:intron 20.0%
!!! TTTTACTAATAATCTGCATT+TGG + chr4_4:81736122-81736141 Msa0708250:intron 20.0%
!!! TTTTTTTGGGAGTTTTTTAA+TGG + chr4_4:81736828-81736847 Msa0708250:intron 20.0%
!! ATCTTAAAATTGTTTGATTG+GGG + chr4_4:81736853-81736872 Msa0708250:intron 20.0%
!! ATATCAATTAAATGATCTCT+TGG + chr4_4:81736943-81736962 Msa0708250:intron 20.0%
!! AAAACAGTTTATGATTTCTA+TGG - chr4_4:81737018-81737037 None:intergenic 20.0%
!! GAAAGAAAAATGAGAAAATA+CGG - chr4_4:81737458-81737477 None:intergenic 20.0%
!!! TGCAATTTGTTGATGATTTA+GGG - chr4_4:81733204-81733223 None:intergenic 25.0%
!!! ATGCAATTTGTTGATGATTT+AGG - chr4_4:81733205-81733224 None:intergenic 25.0%
!! TTTCATTTCATGACCTATTT+TGG - chr4_4:81733427-81733446 None:intergenic 25.0%
! GTTGATACTTGATACAAAAT+TGG + chr4_4:81733718-81733737 Msa0708250:intron 25.0%
! AGAAACAAGATTAGGTATAA+CGG - chr4_4:81734011-81734030 None:intergenic 25.0%
! GAAATTAGAGAATGATCAAA+CGG + chr4_4:81734327-81734346 Msa0708250:CDS 25.0%
!!! TTATGGTTTTGAATATAGAG+AGG + chr4_4:81734497-81734516 Msa0708250:CDS 25.0%
! ATCCACATATTATCAGATAT+TGG - chr4_4:81734688-81734707 None:intergenic 25.0%
!! AAATCCTCATCATATGTTTT+TGG - chr4_4:81734892-81734911 None:intergenic 25.0%
! AATCATATGTCTTAGTATAC+CGG - chr4_4:81735375-81735394 None:intergenic 25.0%
! TCAAACTATGAAAATTGGTA+TGG + chr4_4:81735404-81735423 Msa0708250:intron 25.0%
! CATATTTACATGTCTATCAA+AGG - chr4_4:81735656-81735675 None:intergenic 25.0%
!! TGATATACGTAACTTTAGAA+TGG + chr4_4:81735815-81735834 Msa0708250:CDS 25.0%
!!! AACTTTAGAATGGACATATT+AGG + chr4_4:81735825-81735844 Msa0708250:CDS 25.0%
! TAACCAAATAAAAAAAGTCG+AGG + chr4_4:81736094-81736113 Msa0708250:intron 25.0%
! CTAACAAGTTATTGAAAAGT+TGG + chr4_4:81736421-81736440 Msa0708250:intron 25.0%
!!! AAAGTTGGTTGTTTTTGTTT+AGG + chr4_4:81736436-81736455 Msa0708250:intron 25.0%
!!! AAGTTGGTTGTTTTTGTTTA+GGG + chr4_4:81736437-81736456 Msa0708250:intron 25.0%
! TTAAATAGTTTAACTATGCC+TGG + chr4_4:81736608-81736627 Msa0708250:intron 25.0%
! CTTAAATTTGAACACTCAAA+TGG - chr4_4:81736655-81736674 None:intergenic 25.0%
!!! TTTTCACGACACTTTTTTTT+TGG + chr4_4:81736814-81736833 Msa0708250:intron 25.0%
!!! TTTCACGACACTTTTTTTTT+GGG + chr4_4:81736815-81736834 Msa0708250:intron 25.0%
! ATAACAGCTTAAGATTACTT+TGG - chr4_4:81737077-81737096 None:intergenic 25.0%
!! TTTTCCTTTTATAAAGCTGA+AGG + chr4_4:81737425-81737444 Msa0708250:three_prime_UTR 25.0%
!!! TTTTCCTTCAGCTTTATAAA+AGG - chr4_4:81737432-81737451 None:intergenic 25.0%
! AAAACTTATCTTTCGACAAA+AGG - chr4_4:81737480-81737499 None:intergenic 25.0%
!! TTTGTCGAAAGATAAGTTTT+TGG + chr4_4:81737480-81737499 Msa0708250:three_prime_UTR 25.0%
!!! GTTTTTGGAATATCCAATTT+AGG + chr4_4:81737495-81737514 Msa0708250:three_prime_UTR 25.0%
! AGCTATTATGTTAAAGCATA+TGG + chr4_4:81737577-81737596 Msa0708250:three_prime_UTR 25.0%
TGAATAAAGCAAAGAAACTG+TGG + chr4_4:81733454-81733473 Msa0708250:intron 30.0%
AAACTGTGGATAAAAGTAGA+AGG + chr4_4:81733468-81733487 Msa0708250:intron 30.0%
!! GTTTGCTTCACTCATTTTTA+CGG + chr4_4:81733518-81733537 Msa0708250:intron 30.0%
! ATGCAAACACATTTGTTGAA+TGG + chr4_4:81733615-81733634 Msa0708250:intron 30.0%
!!! TACTTCATTTTGAAGTGTAG+TGG + chr4_4:81733681-81733700 Msa0708250:intron 30.0%
ATACAAAATTGGGCCATAAA+TGG + chr4_4:81733729-81733748 Msa0708250:intron 30.0%
!! TTGTTATTAGATGGGTTTTG+AGG - chr4_4:81734154-81734173 None:intergenic 30.0%
! TAGTAACAAGAGAGGTTTTA+GGG - chr4_4:81734195-81734214 None:intergenic 30.0%
AATAAAGTGGAAGAATCGAT+AGG - chr4_4:81734304-81734323 None:intergenic 30.0%
CTCTAATTTCCACAATAAAG+TGG - chr4_4:81734317-81734336 None:intergenic 30.0%
AAGTGGCAAATCAAGAATTA+TGG + chr4_4:81734480-81734499 Msa0708250:CDS 30.0%
AATCAGCAACAAATTGTTAC+CGG + chr4_4:81734610-81734629 Msa0708250:CDS 30.0%
! TTACAACAAATGTTTTCTGG+TGG + chr4_4:81734736-81734755 Msa0708250:CDS 30.0%
GAAACCAAAAACATATGATG+AGG + chr4_4:81734885-81734904 Msa0708250:CDS 30.0%
AACATATGATGAGGATTTGA+AGG + chr4_4:81734894-81734913 Msa0708250:CDS 30.0%
AGATGCAAAAATCCAAAACT+GGG + chr4_4:81734965-81734984 Msa0708250:CDS 30.0%
AATTCACCACTTACTCTAAT+AGG + chr4_4:81735053-81735072 Msa0708250:intron 30.0%
TTTCAGTTCAAAACTAAAGG+TGG + chr4_4:81735181-81735200 Msa0708250:intron 30.0%
TACTGACAAAAGAAGATTGT+CGG + chr4_4:81735230-81735249 Msa0708250:CDS 30.0%
TTCCTTTGTTGCATGTAATA+AGG + chr4_4:81735264-81735283 Msa0708250:CDS 30.0%
AACCTTATTACATGCAACAA+AGG - chr4_4:81735269-81735288 None:intergenic 30.0%
!!! ACTAGCTTTTTTTGTTTCTC+TGG + chr4_4:81735312-81735331 Msa0708250:intron 30.0%
CTAACTTATTCACCATCTAT+TGG + chr4_4:81735343-81735362 Msa0708250:intron 30.0%
TCTTCACACTGACATTAATT+TGG + chr4_4:81735503-81735522 Msa0708250:CDS 30.0%
CTTCACACTGACATTAATTT+GGG + chr4_4:81735504-81735523 Msa0708250:CDS 30.0%
!! TGAAGGTATAGTTTTTACCT+CGG + chr4_4:81735559-81735578 Msa0708250:intron 30.0%
ATGGACATATTAGGTAAGTT+TGG + chr4_4:81735834-81735853 Msa0708250:CDS 30.0%
! AGGTAAGTTTGGAGTAATAA+TGG + chr4_4:81735845-81735864 Msa0708250:CDS 30.0%
!! TCATGGGCTTATTTTTCTAT+GGG + chr4_4:81735959-81735978 Msa0708250:CDS 30.0%
!! TTATTTTTCTATGGGTCACT+GGG + chr4_4:81735967-81735986 Msa0708250:CDS 30.0%
ATTAGCATATGACCAAATAC+AGG - chr4_4:81736028-81736047 None:intergenic 30.0%
!!! AAGCCTCGACTTTTTTTATT+TGG - chr4_4:81736100-81736119 None:intergenic 30.0%
! TCAATGTTTCTGTTTACTTC+AGG - chr4_4:81736320-81736339 None:intergenic 30.0%
AATATCATACAAACCTCATC+TGG - chr4_4:81736386-81736405 None:intergenic 30.0%
GGTTTACATTATAATAAGCC+TGG + chr4_4:81736487-81736506 Msa0708250:intron 30.0%
!!! AAGTTGTTTTTGTTTTAGCC+AGG - chr4_4:81736508-81736527 None:intergenic 30.0%
GTGAAAATATATCATGCACA+TGG - chr4_4:81736539-81736558 None:intergenic 30.0%
AAGCTTAACAATAACGAATG+TGG - chr4_4:81736574-81736593 None:intergenic 30.0%
TGGTTGTAGTTATAGGTTTA+GGG + chr4_4:81736981-81737000 Msa0708250:intron 30.0%
! ATATTCTCTTTTGTTCCATC+AGG + chr4_4:81737098-81737117 Msa0708250:intron 30.0%
CCAAAATCACAAGATTGAAT+TGG - chr4_4:81737398-81737417 None:intergenic 30.0%
! CCAATTCAATCTTGTGATTT+TGG + chr4_4:81737395-81737414 Msa0708250:three_prime_UTR 30.0%
!! TTCAATCTTGTGATTTTGGT+AGG + chr4_4:81737399-81737418 Msa0708250:three_prime_UTR 30.0%
!! TCAATCTTGTGATTTTGGTA+GGG + chr4_4:81737400-81737419 Msa0708250:three_prime_UTR 30.0%
GTGTTTCATATCAGAGAAGT+AGG - chr4_4:81733554-81733573 None:intergenic 35.0%
CAAAATGAAGTATGTACCGT+CGG - chr4_4:81733673-81733692 None:intergenic 35.0%
TGTAGTGGCATAATTAGTGA+TGG + chr4_4:81733696-81733715 Msa0708250:intron 35.0%
CAACCTATGCAATCCATTTA+TGG - chr4_4:81733745-81733764 None:intergenic 35.0%
! TTAACTACATGCAAGAGTGT+AGG + chr4_4:81733771-81733790 Msa0708250:intron 35.0%
TCGAGAGAAGAAACAAGATT+AGG - chr4_4:81734019-81734038 None:intergenic 35.0%
! AAGAGAGAACTTTGAGAGAA+AGG - chr4_4:81734042-81734061 None:intergenic 35.0%
AGTTGTTGGAGAGATGATTT+GGG - chr4_4:81734130-81734149 None:intergenic 35.0%
TAGTTGTTGGAGAGATGATT+TGG - chr4_4:81734131-81734150 None:intergenic 35.0%
! GTAGTAACAAGAGAGGTTTT+AGG - chr4_4:81734196-81734215 None:intergenic 35.0%
TGGATTTGTAGTAACAAGAG+AGG - chr4_4:81734203-81734222 None:intergenic 35.0%
ATTGATCGAACAATGGACAA+AGG - chr4_4:81734244-81734263 None:intergenic 35.0%
TTTGTCCATTGTTCGATCAA+TGG + chr4_4:81734243-81734262 Msa0708250:CDS 35.0%
GAAGAATCGATAGGTGAAAA+AGG - chr4_4:81734295-81734314 None:intergenic 35.0%
TCGATTCTTCCACTTTATTG+TGG + chr4_4:81734305-81734324 Msa0708250:CDS 35.0%
!! TGATAATGGTGCTGTTGAAT+TGG + chr4_4:81734444-81734463 Msa0708250:CDS 35.0%
!! TTGGAAGAGTTTGTTGTAAG+TGG + chr4_4:81734463-81734482 Msa0708250:CDS 35.0%
GGCCAATATCTGATAATATG+TGG + chr4_4:81734683-81734702 Msa0708250:CDS 35.0%
GATAATATGTGGATGTCACA+TGG + chr4_4:81734694-81734713 Msa0708250:CDS 35.0%
!! GAAAACATTTGTTGTAACCC+TGG - chr4_4:81734733-81734752 None:intergenic 35.0%
! GGGTTACAACAAATGTTTTC+TGG + chr4_4:81734733-81734752 Msa0708250:CDS 35.0%
ATATGATGAGGATTTGAAGG+AGG + chr4_4:81734897-81734916 Msa0708250:CDS 35.0%
GAGATGCAAAAATCCAAAAC+TGG + chr4_4:81734964-81734983 Msa0708250:CDS 35.0%
GTATAGCCTATTAGAGTAAG+TGG - chr4_4:81735062-81735081 None:intergenic 35.0%
! TCACAGCTTTTACTATACTC+TGG + chr4_4:81735112-81735131 Msa0708250:intron 35.0%
ATTACATGCAACAAAGGAAC+CGG - chr4_4:81735263-81735282 None:intergenic 35.0%
CACAAATGCACATCAACAAA+AGG - chr4_4:81735444-81735463 None:intergenic 35.0%
! TGCATTTGTGATCCTTTTCT+CGG + chr4_4:81735454-81735473 Msa0708250:intron 35.0%
! GTTCTTTTCTTGATACTTGC+CGG + chr4_4:81735532-81735551 Msa0708250:CDS 35.0%
AAAACTATACCTTCATGTGC+CGG - chr4_4:81735554-81735573 None:intergenic 35.0%
!! TATTGTTCTGAAGTGGAACT+TGG + chr4_4:81735771-81735790 Msa0708250:CDS 35.0%
ATATCACAGTTGATCCATTG+TGG - chr4_4:81735801-81735820 None:intergenic 35.0%
!! CTCATGGGCTTATTTTTCTA+TGG + chr4_4:81735958-81735977 Msa0708250:CDS 35.0%
!! CTTATTTTTCTATGGGTCAC+TGG + chr4_4:81735966-81735985 Msa0708250:CDS 35.0%
ATGGTATTTGCACCTGTATT+TGG + chr4_4:81736013-81736032 Msa0708250:intron 35.0%
CTTCAGCGAATAATTAGAAC+TGG + chr4_4:81736233-81736252 Msa0708250:CDS 35.0%
ATAATTAGAACTGGACGTAC+CGG + chr4_4:81736242-81736261 Msa0708250:CDS 35.0%
CTTAACAATAACGAATGTGG+AGG - chr4_4:81736571-81736590 None:intergenic 35.0%
TAGTTTAACTATGCCTGGTA+CGG + chr4_4:81736613-81736632 Msa0708250:intron 35.0%
AATAACTTTAGTACCGTACC+AGG - chr4_4:81736629-81736648 None:intergenic 35.0%
CTTGGACTAAAAACCTAATG+TGG + chr4_4:81736961-81736980 Msa0708250:intron 35.0%
CCTATAACTACAACCACATT+AGG - chr4_4:81736977-81736996 None:intergenic 35.0%
CCTAATGTGGTTGTAGTTAT+AGG + chr4_4:81736974-81736993 Msa0708250:intron 35.0%
GTGGTTGTAGTTATAGGTTT+AGG + chr4_4:81736980-81736999 Msa0708250:intron 35.0%
! TCTCTTGGTAATCAATTGAG+TGG + chr4_4:81737127-81737146 Msa0708250:CDS 35.0%
GTAATCAATTGAGTGGTGTA+AGG + chr4_4:81737134-81737153 Msa0708250:CDS 35.0%
GTGTAAGGTTAGTAGATGAA+GGG + chr4_4:81737149-81737168 Msa0708250:CDS 35.0%
! ATTTGTTGAATGGTGTCCGT+CGG + chr4_4:81733625-81733644 Msa0708250:intron 40.0%
AATCCGTCATTCATCATCCA+TGG + chr4_4:81733874-81733893 Msa0708250:exon 40.0%
TGTCCATGGATGATGAATGA+CGG - chr4_4:81733880-81733899 None:intergenic 40.0%
TCATTCATCATCCATGGACA+TGG + chr4_4:81733880-81733899 Msa0708250:exon 40.0%
TGAAATTGGTTAGAGGAGGA+GGG - chr4_4:81734102-81734121 None:intergenic 40.0%
TTGAAATTGGTTAGAGGAGG+AGG - chr4_4:81734103-81734122 None:intergenic 40.0%
! TGATTTGGGAGGGTTGAAAT+TGG - chr4_4:81734116-81734135 None:intergenic 40.0%
!!! ATGGGTTTTGAGGTAGTTGT+TGG - chr4_4:81734144-81734163 None:intergenic 40.0%
GACAAAGGACTAACTTTCTC+TGG - chr4_4:81734229-81734248 None:intergenic 40.0%
AGCAACCATTGATCGAACAA+TGG - chr4_4:81734251-81734270 None:intergenic 40.0%
! TTGCAGTTGAGATAGCTTTG+AGG + chr4_4:81734410-81734429 Msa0708250:CDS 40.0%
!! TGAGATAGCTTTGAGGTCAA+TGG + chr4_4:81734417-81734436 Msa0708250:CDS 40.0%
AGGTCAATGGCAGATGATAA+TGG + chr4_4:81734430-81734449 Msa0708250:CDS 40.0%
AGGAAATTCTCTCAAGAGAC+GGG - chr4_4:81734524-81734543 None:intergenic 40.0%
CAGGAAATTCTCTCAAGAGA+CGG - chr4_4:81734525-81734544 None:intergenic 40.0%
! TACGAATGTGAACGGTGTTA+TGG + chr4_4:81734636-81734655 Msa0708250:CDS 40.0%
!! ACGAATGTGAACGGTGTTAT+GGG + chr4_4:81734637-81734656 Msa0708250:CDS 40.0%
! TCAGATATTGGCCTCAAAAC+TGG - chr4_4:81734676-81734695 None:intergenic 40.0%
!! CAACAAATGTTTTCTGGTGG+TGG + chr4_4:81734739-81734758 Msa0708250:CDS 40.0%
ATACTACTCCCTGATGCATT+TGG - chr4_4:81734850-81734869 None:intergenic 40.0%
GGATTTGAAGGAGGATTTGA+AGG + chr4_4:81734906-81734925 Msa0708250:CDS 40.0%
GGAGGATTTGAAGGAATTTG+AGG + chr4_4:81734915-81734934 Msa0708250:CDS 40.0%
GCAAAAATCCAAAACTGGGA+AGG + chr4_4:81734969-81734988 Msa0708250:CDS 40.0%
TAATTCAGAAACCGACTGCA+AGG + chr4_4:81735004-81735023 Msa0708250:CDS 40.0%
AATTCAGAAACCGACTGCAA+GGG + chr4_4:81735005-81735024 Msa0708250:CDS 40.0%
CAAAACTAAAGGTGGTTCTC+AGG + chr4_4:81735189-81735208 Msa0708250:CDS 40.0%
!!! CACCATCTATTGGTTTTAGC+CGG + chr4_4:81735353-81735372 Msa0708250:intron 40.0%
! TACCGGCTAAAACCAATAGA+TGG - chr4_4:81735358-81735377 None:intergenic 40.0%
AAAATGAACCTGCCGAGAAA+AGG - chr4_4:81735469-81735488 None:intergenic 40.0%
TTACCTCGGAGTTCTTATGT+TGG + chr4_4:81735573-81735592 Msa0708250:intron 40.0%
AATCCAACATAAGAACTCCG+AGG - chr4_4:81735579-81735598 None:intergenic 40.0%
! AGAGAGCACAACTCAAACAT+AGG - chr4_4:81735626-81735645 None:intergenic 40.0%
! TGATTTGCCTCCAACAATGA+CGG + chr4_4:81735701-81735720 Msa0708250:CDS 40.0%
!! TGCTGAGTATTGTTCTGAAG+TGG + chr4_4:81735764-81735783 Msa0708250:CDS 40.0%
TGTTCTGCAGCTTAGAACTT+TGG + chr4_4:81736165-81736184 Msa0708250:intron 40.0%
GTTCTGCAGCTTAGAACTTT+GGG + chr4_4:81736166-81736185 Msa0708250:intron 40.0%
TTCTGCAGCTTAGAACTTTG+GGG + chr4_4:81736167-81736186 Msa0708250:intron 40.0%
TTGGGGATATAAACGTGTTG+AGG + chr4_4:81736184-81736203 Msa0708250:CDS 40.0%
AACGTGTTGAGGAGATCATT+TGG + chr4_4:81736195-81736214 Msa0708250:CDS 40.0%
ACGTGTTGAGGAGATCATTT+GGG + chr4_4:81736196-81736215 Msa0708250:CDS 40.0%
ACATTGTCTCGTTGGGATAA+AGG + chr4_4:81736289-81736308 Msa0708250:CDS 40.0%
CATTGTCTCGTTGGGATAAA+GGG + chr4_4:81736290-81736309 Msa0708250:CDS 40.0%
GACTTCAGCGACAATAACAT+CGG - chr4_4:81736345-81736364 None:intergenic 40.0%
ATGTTATTGTCGCTGAAGTC+CGG + chr4_4:81736345-81736364 Msa0708250:CDS 40.0%
!! TACAAACCTCATCTGGCTTT+CGG - chr4_4:81736379-81736398 None:intergenic 40.0%
CCAACAAAGGATACATCTGT+AGG - chr4_4:81736718-81736737 None:intergenic 40.0%
CCTACAGATGTATCCTTTGT+TGG + chr4_4:81736715-81736734 Msa0708250:intron 40.0%
AGATGTATCCTTTGTTGGAG+AGG + chr4_4:81736720-81736739 Msa0708250:intron 40.0%
AAGTCCAAGAACAAGAAAGC+TGG + chr4_4:81736745-81736764 Msa0708250:CDS 40.0%
AACTCCAGCTTTCTTGTTCT+TGG - chr4_4:81736752-81736771 None:intergenic 40.0%
! GATTGGGGTCGATTATTTTC+TGG + chr4_4:81736868-81736887 Msa0708250:intron 40.0%
! TTCTCTTTTGTTCCATCAGG+TGG + chr4_4:81737101-81737120 Msa0708250:intron 40.0%
GGTGTAAGGTTAGTAGATGA+AGG + chr4_4:81737148-81737167 Msa0708250:CDS 40.0%
TGGAATATCCAATTTAGGCG+AGG + chr4_4:81737500-81737519 Msa0708250:three_prime_UTR 40.0%
ATATCCAATTTAGGCGAGGA+TGG + chr4_4:81737504-81737523 Msa0708250:three_prime_UTR 40.0%
ACGAAGAGAACTCATTTCGC+CGG + chr4_4:81733232-81733251 Msa0708250:five_prime_UTR 45.0%
!! GGAATTTCTGGCAGGTTGTA+CGG - chr4_4:81733286-81733305 None:intergenic 45.0%
!! GGGCCATAAATGGATTGCAT+AGG + chr4_4:81733739-81733758 Msa0708250:intron 45.0%
TTCATCTGTCTCCATGTCCA+TGG - chr4_4:81733894-81733913 None:intergenic 45.0%
ATGGACATGGAGACAGATGA+AGG + chr4_4:81733893-81733912 Msa0708250:CDS 45.0%
AACCCAACACAAGTCACACA+TGG + chr4_4:81733964-81733983 Msa0708250:CDS 45.0%
! GTCCATGTGTGACTTGTGTT+GGG - chr4_4:81733969-81733988 None:intergenic 45.0%
! TGTCCATGTGTGACTTGTGT+TGG - chr4_4:81733970-81733989 None:intergenic 45.0%
GGGTTGAAATTGGTTAGAGG+AGG - chr4_4:81734106-81734125 None:intergenic 45.0%
GGAGGGTTGAAATTGGTTAG+AGG - chr4_4:81734109-81734128 None:intergenic 45.0%
! GTTGGAGAGATGATTTGGGA+GGG - chr4_4:81734126-81734145 None:intergenic 45.0%
! TGTTGGAGAGATGATTTGGG+AGG - chr4_4:81734127-81734146 None:intergenic 45.0%
! GGACTAACTTTCTCTGGTTC+TGG - chr4_4:81734223-81734242 None:intergenic 45.0%
GCTATCTCAACTGCAAGTGT+CGG - chr4_4:81734406-81734425 None:intergenic 45.0%
! TGCTGATGATGTGCAGTTTC+AGG - chr4_4:81734544-81734563 None:intergenic 45.0%
CTGCAAAATGAGTCGAGTCT+CGG + chr4_4:81734568-81734587 Msa0708250:CDS 45.0%
ACCGGTAGTACGAATGTGAA+CGG + chr4_4:81734628-81734647 Msa0708250:CDS 45.0%
ACCGTTCACATTCGTACTAC+CGG - chr4_4:81734632-81734651 None:intergenic 45.0%
ATTGGGAGTCTATGCATCGA+CGG - chr4_4:81734823-81734842 None:intergenic 45.0%
TCGATGCATAGACTCCCAAT+GGG + chr4_4:81734823-81734842 Msa0708250:CDS 45.0%
! CAAAAGCTCCTTCCCAGTTT+TGG - chr4_4:81734980-81734999 None:intergenic 45.0%
! CAAAACTGGGAAGGAGCTTT+TGG + chr4_4:81734978-81734997 Msa0708250:CDS 45.0%
! TTTGTGATCCTTTTCTCGGC+AGG + chr4_4:81735458-81735477 Msa0708250:intron 45.0%
TTGGAGGCAAATCAGGTGTT+GGG - chr4_4:81735695-81735714 None:intergenic 45.0%
GTCATTGTTGGAGGCAAATC+AGG - chr4_4:81735702-81735721 None:intergenic 45.0%
GATTTGCCTCCAACAATGAC+GGG + chr4_4:81735702-81735721 Msa0708250:CDS 45.0%
!!! TGTTTTAGTGGTTTGGGAGG+AGG - chr4_4:81735738-81735757 None:intergenic 45.0%
!!! TGCTGTTTTAGTGGTTTGGG+AGG - chr4_4:81735741-81735760 None:intergenic 45.0%
!!! CGCTGCTGTTTTAGTGGTTT+GGG - chr4_4:81735744-81735763 None:intergenic 45.0%
!!! ACGCTGCTGTTTTAGTGGTT+TGG - chr4_4:81735745-81735764 None:intergenic 45.0%
! TGGAACTTGGTGAACCACAA+TGG + chr4_4:81735784-81735803 Msa0708250:CDS 45.0%
TAATAATGGCTGATCCACCG+TGG + chr4_4:81735859-81735878 Msa0708250:CDS 45.0%
AATAATGGCTGATCCACCGT+GGG + chr4_4:81735860-81735879 Msa0708250:CDS 45.0%
ATTCACATGGAGCTGCCTTA+TGG + chr4_4:81735885-81735904 Msa0708250:CDS 45.0%
TCATCCGCCATTGTTCCATA+AGG - chr4_4:81735903-81735922 None:intergenic 45.0%
CAATGGAACTTGGACGAGAA+TGG + chr4_4:81735994-81736013 Msa0708250:CDS 45.0%
AGCAAGGAACATTGTCTCGT+TGG + chr4_4:81736281-81736300 Msa0708250:CDS 45.0%
GCAAGGAACATTGTCTCGTT+GGG + chr4_4:81736282-81736301 Msa0708250:CDS 45.0%
TGTTATTGTCGCTGAAGTCC+GGG + chr4_4:81736346-81736365 Msa0708250:CDS 45.0%
CAATAACGAATGTGGAGGAG+AGG - chr4_4:81736566-81736585 None:intergenic 45.0%
GGACTTATCCTCTCCAACAA+AGG - chr4_4:81736731-81736750 None:intergenic 45.0%
GCATGCACAATACTCATGCA+GGG + chr4_4:81736780-81736799 Msa0708250:CDS 45.0%
TAAGGCAGCTTATCCAGATG+TGG + chr4_4:81737186-81737205 Msa0708250:CDS 45.0%
! CTAGTGTTGCTGCTCAAACA+AGG + chr4_4:81737257-81737276 Msa0708250:CDS 45.0%
CAAACAAGGAGTCCATTTGC+CGG + chr4_4:81737271-81737290 Msa0708250:CDS 45.0%
! TTTGATTCTGTGCCGGCAAA+TGG - chr4_4:81737286-81737305 None:intergenic 45.0%
! AGTGGACTTTGATTCTGTGC+CGG - chr4_4:81737293-81737312 None:intergenic 45.0%
ATTTCGCCGGAAAACCCAAC+CGG + chr4_4:81733245-81733264 Msa0708250:five_prime_UTR 50.0%
!! ATTTCTGGCAGGTTGTACGG+CGG - chr4_4:81733283-81733302 None:intergenic 50.0%
!! GATACGACGGAATTTCTGGC+AGG - chr4_4:81733294-81733313 None:intergenic 50.0%
AGCGGATACGACGGAATTTC+TGG - chr4_4:81733298-81733317 None:intergenic 50.0%
CAATCTGCAGGTTGCTGGTA+CGG - chr4_4:81733322-81733341 None:intergenic 50.0%
ACTCGGACACAACTATCCGA+CGG + chr4_4:81733654-81733673 Msa0708250:intron 50.0%
! AAGTGCGGCTTTGTCTTGTG+GGG - chr4_4:81734356-81734375 None:intergenic 50.0%
! GAAGTGCGGCTTTGTCTTGT+GGG - chr4_4:81734357-81734376 None:intergenic 50.0%
! TGAAGTGCGGCTTTGTCTTG+TGG - chr4_4:81734358-81734377 None:intergenic 50.0%
AAAGCCGCACTTCAAGAGCT+TGG + chr4_4:81734364-81734383 Msa0708250:CDS 50.0%
TCCACCAAGCTCTTGAAGTG+CGG - chr4_4:81734371-81734390 None:intergenic 50.0%
! CAAGAGCTTGGTGGAGATTC+AGG + chr4_4:81734376-81734395 Msa0708250:CDS 50.0%
! AGCTTGGTGGAGATTCAGGA+GGG + chr4_4:81734380-81734399 Msa0708250:CDS 50.0%
AATGAGTCGAGTCTCGGAGA+TGG + chr4_4:81734574-81734593 Msa0708250:CDS 50.0%
!! AACGGTGTTATGGGTGCGAT+GGG + chr4_4:81734646-81734665 Msa0708250:CDS 50.0%
GTTGTAACCCTGGCATGTGA+GGG - chr4_4:81734723-81734742 None:intergenic 50.0%
TGTTGTAACCCTGGCATGTG+AGG - chr4_4:81734724-81734743 None:intergenic 50.0%
!!! TGTTTTCTGGTGGTGGACCA+AGG + chr4_4:81734746-81734765 Msa0708250:CDS 50.0%
!!! GTTTTCTGGTGGTGGACCAA+GGG + chr4_4:81734747-81734766 Msa0708250:CDS 50.0%
!!! TTTTCTGGTGGTGGACCAAG+GGG + chr4_4:81734748-81734767 Msa0708250:CDS 50.0%
AGCACCAGGACTAATGGGAA+TGG + chr4_4:81734771-81734790 Msa0708250:CDS 50.0%
ACCAGGACTAATGGGAATGG+TGG + chr4_4:81734774-81734793 Msa0708250:CDS 50.0%
GTCGATGCATAGACTCCCAA+TGG + chr4_4:81734822-81734841 Msa0708250:CDS 50.0%
CGATGCATAGACTCCCAATG+GGG + chr4_4:81734824-81734843 Msa0708250:CDS 50.0%
CTGATGCATTTGGCCCCATT+GGG - chr4_4:81734840-81734859 None:intergenic 50.0%
CAATGGGGCCAAATGCATCA+GGG + chr4_4:81734839-81734858 Msa0708250:CDS 50.0%
ATGCAACAAAGGAACCGGTC+TGG - chr4_4:81735258-81735277 None:intergenic 50.0%
TGATACTTGCCGGCACATGA+AGG + chr4_4:81735542-81735561 Msa0708250:CDS 50.0%
GTTGGAGGCAAATCAGGTGT+TGG - chr4_4:81735696-81735715 None:intergenic 50.0%
! TTTAGTGGTTTGGGAGGAGG+AGG - chr4_4:81735735-81735754 None:intergenic 50.0%
!!! TCAGCACGCTGCTGTTTTAG+TGG - chr4_4:81735750-81735769 None:intergenic 50.0%
AGCTCCATGTGAATGTCCCA+CGG - chr4_4:81735879-81735898 None:intergenic 50.0%
GGAGCTGCCTTATGGAACAA+TGG + chr4_4:81735893-81735912 Msa0708250:CDS 50.0%
GCTGCCTTATGGAACAATGG+CGG + chr4_4:81735896-81735915 Msa0708250:CDS 50.0%
TCCCTGCTCTGCAAACTCAT+GGG + chr4_4:81735943-81735962 Msa0708250:CDS 50.0%
! CCTTGCTGTGATTGAGCCAA+TGG - chr4_4:81736268-81736287 None:intergenic 50.0%
!! CCATTGGCTCAATCACAGCA+AGG + chr4_4:81736265-81736284 Msa0708250:CDS 50.0%
AACAAGCCGAAAGCCAGATG+AGG + chr4_4:81736370-81736389 Msa0708250:CDS 50.0%
CGCATGCACAATACTCATGC+AGG + chr4_4:81736779-81736798 Msa0708250:CDS 50.0%
GCACAATACTCATGCAGGGT+TGG + chr4_4:81736784-81736803 Msa0708250:intron 50.0%
TCCATCAGGTGGATGTCTCT+TGG + chr4_4:81737112-81737131 Msa0708250:intron 50.0%
ACCAAGAGACATCCACCTGA+TGG - chr4_4:81737116-81737135 None:intergenic 50.0%
GGTTAGTAGATGAAGGGCTC+CGG + chr4_4:81737155-81737174 Msa0708250:CDS 50.0%
GTTAGTAGATGAAGGGCTCC+GGG + chr4_4:81737156-81737175 Msa0708250:CDS 50.0%
AAGCTGCCTTAAACCTTGCC+CGG - chr4_4:81737177-81737196 None:intergenic 50.0%
ACCTCCATAGCAGAAGCTCT+GGG - chr4_4:81737232-81737251 None:intergenic 50.0%
TACCTCCATAGCAGAAGCTC+TGG - chr4_4:81737233-81737252 None:intergenic 50.0%
! TCTGAAGCAGAGGTAGTTGC+TGG - chr4_4:81737331-81737350 None:intergenic 50.0%
AGCAACTACCTCTGCTTCAG+AGG + chr4_4:81737330-81737349 Msa0708250:CDS 50.0%
TACCTCTGCTTCAGAGGAGA+AGG + chr4_4:81737336-81737355 Msa0708250:CDS 50.0%
CATGCCATCCTCGCCTAAAT+TGG - chr4_4:81737511-81737530 None:intergenic 50.0%
! GGAACTCCGGTTGGGTTTTC+CGG - chr4_4:81733254-81733273 None:intergenic 55.0%
TGGTACGGAAGCGGATACGA+CGG - chr4_4:81733307-81733326 None:intergenic 55.0%
ATGCGCAATCTGCAGGTTGC+TGG - chr4_4:81733327-81733346 None:intergenic 55.0%
GAACGCAATGCGCAATCTGC+AGG - chr4_4:81733334-81733353 None:intergenic 55.0%
GCAGATTGCGCATTGCGTTC+TGG + chr4_4:81733334-81733353 Msa0708250:five_prime_UTR 55.0%
!! GTGTCCGTCGGTGTTGAACT+CGG + chr4_4:81733637-81733656 Msa0708250:intron 55.0%
GTGTCCGAGTTCAACACCGA+CGG - chr4_4:81733644-81733663 None:intergenic 55.0%
GTGTAGGAGCAAAAGGACGG+TGG - chr4_4:81734072-81734091 None:intergenic 55.0%
GGGGTGTAGGAGCAAAAGGA+CGG - chr4_4:81734075-81734094 None:intergenic 55.0%
! AGAGGGGGTGTAGGAGCAAA+AGG - chr4_4:81734079-81734098 None:intergenic 55.0%
TGGTTAGAGGAGGAGGGAGA+GGG - chr4_4:81734096-81734115 None:intergenic 55.0%
TTGGTTAGAGGAGGAGGGAG+AGG - chr4_4:81734097-81734116 None:intergenic 55.0%
! GAGCTTGGTGGAGATTCAGG+AGG + chr4_4:81734379-81734398 Msa0708250:CDS 55.0%
!! GAACGGTGTTATGGGTGCGA+TGG + chr4_4:81734645-81734664 Msa0708250:CDS 55.0%
GTGTTATGGGTGCGATGGGA+AGG + chr4_4:81734650-81734669 Msa0708250:CDS 55.0%
! CGATGGGAAGGCCAGTTTTG+AGG + chr4_4:81734662-81734681 Msa0708250:CDS 55.0%
ATGGTGACCCTCACATGCCA+GGG + chr4_4:81734713-81734732 Msa0708250:CDS 55.0%
ATTAGTCCTGGTGCTCCCCT+TGG - chr4_4:81734766-81734785 None:intergenic 55.0%
!! AAGGGGAGCACCAGGACTAA+TGG + chr4_4:81734765-81734784 Msa0708250:CDS 55.0%
!! AGGGGAGCACCAGGACTAAT+GGG + chr4_4:81734766-81734785 Msa0708250:CDS 55.0%
GCCACCATTCCCATTAGTCC+TGG - chr4_4:81734778-81734797 None:intergenic 55.0%
CCTGATGCATTTGGCCCCAT+TGG - chr4_4:81734841-81734860 None:intergenic 55.0%
CCAATGGGGCCAAATGCATC+AGG + chr4_4:81734838-81734857 Msa0708250:CDS 55.0%
TCAGAAACCGACTGCAAGGG+AGG + chr4_4:81735008-81735027 Msa0708250:CDS 55.0%
! AGAGCACCCGTCATTGTTGG+AGG - chr4_4:81735711-81735730 None:intergenic 55.0%
!! GGAAGAGCACCCGTCATTGT+TGG - chr4_4:81735714-81735733 None:intergenic 55.0%
TCCACCGTGGGACATTCACA+TGG + chr4_4:81735872-81735891 Msa0708250:CDS 55.0%
TCCATGTGAATGTCCCACGG+TGG - chr4_4:81735876-81735895 None:intergenic 55.0%
GTCCCTGCTCTGCAAACTCA+TGG + chr4_4:81735942-81735961 Msa0708250:CDS 55.0%
GCCCATGAGTTTGCAGAGCA+GGG - chr4_4:81735947-81735966 None:intergenic 55.0%
AGCCCATGAGTTTGCAGAGC+AGG - chr4_4:81735948-81735967 None:intergenic 55.0%
ACTGGGCGTGCAATGGAACT+TGG + chr4_4:81735984-81736003 Msa0708250:CDS 55.0%
GCTGTGATTGAGCCAATGGC+CGG - chr4_4:81736264-81736283 None:intergenic 55.0%
! CTGGCTTTCGGCTTGTTTCC+CGG - chr4_4:81736367-81736386 None:intergenic 55.0%
GGCAGCTTATCCAGATGTGG+AGG + chr4_4:81737189-81737208 Msa0708250:CDS 55.0%
ACCTCCCAGAGCTTCTGCTA+TGG + chr4_4:81737225-81737244 Msa0708250:CDS 55.0%
!! TCCATAGCAGAAGCTCTGGG+AGG - chr4_4:81737229-81737248 None:intergenic 55.0%
TCCCAGAGCTTCTGCTATGG+AGG + chr4_4:81737228-81737247 Msa0708250:CDS 55.0%
TGCTTCAGAGGAGAAGGCGA+TGG + chr4_4:81737342-81737361 Msa0708250:CDS 55.0%
GAAGGCGATGGTCATTGACG+TGG + chr4_4:81737354-81737373 Msa0708250:CDS 55.0%
GCAGGTTGCTGGTACGGAAG+CGG - chr4_4:81733316-81733335 None:intergenic 60.0%
GTTAGAGGAGGAGGGAGAGG+GGG - chr4_4:81734094-81734113 None:intergenic 60.0%
GGTTAGAGGAGGAGGGAGAG+GGG - chr4_4:81734095-81734114 None:intergenic 60.0%
GCCGCACTTCAAGAGCTTGG+TGG + chr4_4:81734367-81734386 Msa0708250:CDS 60.0%
CATGGTGACCCTCACATGCC+AGG + chr4_4:81734712-81734731 Msa0708250:CDS 60.0%
GGAATGGTGGCTGCACAGAG+AGG + chr4_4:81734787-81734806 Msa0708250:CDS 60.0%
ACAGCAGCCTCCCTTGCAGT+CGG - chr4_4:81735018-81735037 None:intergenic 60.0%
GGAGGCTGCTGTAGCTGCTA+AGG + chr4_4:81735026-81735045 Msa0708250:CDS 60.0%
GAAGATTGTCGGCGCCAGAC+CGG + chr4_4:81735241-81735260 Msa0708250:CDS 60.0%
ATGGGTCACTGGGCGTGCAA+TGG + chr4_4:81735977-81735996 Msa0708250:CDS 60.0%
! GAACTGGACGTACCGGCCAT+TGG + chr4_4:81736249-81736268 Msa0708250:CDS 60.0%
TAGATGAAGGGCTCCGGGCA+AGG + chr4_4:81737161-81737180 Msa0708250:CDS 60.0%
AGGGCTCCGGGCAAGGTTTA+AGG + chr4_4:81737168-81737187 Msa0708250:CDS 60.0%
!! GAAGCTCTGGGAGGTGATGC+TGG - chr4_4:81737220-81737239 None:intergenic 60.0%
GAGGTAGTTGCTGGAGCTGC+AGG - chr4_4:81737322-81737341 None:intergenic 60.0%
!! CGCCTTCTCCTCTGAAGCAG+AGG - chr4_4:81737341-81737360 None:intergenic 60.0%
GGCGAGGAGGAACTCCGGTT+GGG - chr4_4:81733262-81733281 None:intergenic 65.0%
GCTGGCTGCACCTCCACATC+TGG - chr4_4:81737202-81737221 None:intergenic 65.0%
TGGAGCTGCAGGCTCAGCAG+TGG - chr4_4:81737311-81737330 None:intergenic 65.0%
CGGCGAGGAGGAACTCCGGT+TGG - chr4_4:81733263-81733282 None:intergenic 70.0%
ACGGCGGCGAGGAGGAACTC+CGG - chr4_4:81733267-81733286 None:intergenic 70.0%
CAGGTTGTACGGCGGCGAGG+AGG - chr4_4:81733275-81733294 None:intergenic 70.0%
TGGCAGGTTGTACGGCGGCG+AGG - chr4_4:81733278-81733297 None:intergenic 70.0%
! GGAGGAGGGAGAGGGGGTGT+AGG - chr4_4:81734088-81734107 None:intergenic 70.0%
!! GGTGGACCAAGGGGAGCACC+AGG + chr4_4:81734757-81734776 Msa0708250:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 81733189 81737662 81733189 ID=Msa0708250;Name=Msa0708250
chr4_4 mRNA 81733189 81737662 81733189 ID=Msa0708250-mRNA-1;Parent=Msa0708250;Name=Msa0708250-mRNA-1;_AED=0.05;_eAED=0.05;_QI=201|1|1|1|1|1|8|275|751
chr4_4 exon 81733189 81733364 81733189 ID=Msa0708250-mRNA-1:exon:26807;Parent=Msa0708250-mRNA-1
chr4_4 exon 81733868 81735047 81733868 ID=Msa0708250-mRNA-1:exon:26808;Parent=Msa0708250-mRNA-1
chr4_4 exon 81735187 81735285 81735187 ID=Msa0708250-mRNA-1:exon:26809;Parent=Msa0708250-mRNA-1
chr4_4 exon 81735480 81735563 81735480 ID=Msa0708250-mRNA-1:exon:26810;Parent=Msa0708250-mRNA-1
chr4_4 exon 81735663 81736015 81735663 ID=Msa0708250-mRNA-1:exon:26811;Parent=Msa0708250-mRNA-1
chr4_4 exon 81736175 81736391 81736175 ID=Msa0708250-mRNA-1:exon:26812;Parent=Msa0708250-mRNA-1
chr4_4 exon 81736722 81736801 81736722 ID=Msa0708250-mRNA-1:exon:26813;Parent=Msa0708250-mRNA-1
chr4_4 exon 81737120 81737662 81737120 ID=Msa0708250-mRNA-1:exon:26814;Parent=Msa0708250-mRNA-1
chr4_4 five_prime_UTR 81733189 81733364 81733189 ID=Msa0708250-mRNA-1:five_prime_utr;Parent=Msa0708250-mRNA-1
chr4_4 five_prime_UTR 81733868 81733892 81733868 ID=Msa0708250-mRNA-1:five_prime_utr;Parent=Msa0708250-mRNA-1
chr4_4 CDS 81733893 81735047 81733893 ID=Msa0708250-mRNA-1:cds;Parent=Msa0708250-mRNA-1
chr4_4 CDS 81735187 81735285 81735187 ID=Msa0708250-mRNA-1:cds;Parent=Msa0708250-mRNA-1
chr4_4 CDS 81735480 81735563 81735480 ID=Msa0708250-mRNA-1:cds;Parent=Msa0708250-mRNA-1
chr4_4 CDS 81735663 81736015 81735663 ID=Msa0708250-mRNA-1:cds;Parent=Msa0708250-mRNA-1
chr4_4 CDS 81736175 81736391 81736175 ID=Msa0708250-mRNA-1:cds;Parent=Msa0708250-mRNA-1
chr4_4 CDS 81736722 81736801 81736722 ID=Msa0708250-mRNA-1:cds;Parent=Msa0708250-mRNA-1
chr4_4 CDS 81737120 81737387 81737120 ID=Msa0708250-mRNA-1:cds;Parent=Msa0708250-mRNA-1
chr4_4 three_prime_UTR 81737388 81737662 81737388 ID=Msa0708250-mRNA-1:three_prime_utr;Parent=Msa0708250-mRNA-1
Gene Sequence

>Msa0708250

ATGGACATGGAGACAGATGAAGGTTTAAACAGTATTAAAGATATAAGGCAACAACTTGAAGCTCGCATAGAAACCCAACACAAGTCACACATGGACATGCTTTCTTCTGTACAATCCGTTATACCTAATCTTGTTTCTTCTCTCGACCTTTCTCTCAAAGTTCTCTCTTCTTTCAACCACCGTCCTTTTGCTCCTACACCCCCTCTCCCTCCTCCTCTAACCAATTTCAACCCTCCCAAATCATCTCTCCAACAACTACCTCAAAACCCATCTAATAACAATAATAATAATCTTCAAAACCCTAAAACCTCTCTTGTTACTACAAATCCAGAACCAGAGAAAGTTAGTCCTTTGTCCATTGTTCGATCAATGGTTGCTGTTTGTCTTTTAAGTCGAGTACCTTTTTCACCTATCGATTCTTCCACTTTATTGTGGAAATTAGAGAATGATCAAACGGTTACCCCACAAGACAAAGCCGCACTTCAAGAGCTTGGTGGAGATTCAGGAGGGCCGACACTTGCAGTTGAGATAGCTTTGAGGTCAATGGCAGATGATAATGGTGCTGTTGAATTGGAAGAGTTTGTTGTAAGTGGCAAATCAAGAATTATGGTTTTGAATATAGAGAGGACCCGTCTCTTGAGAGAATTTCCTGAAACTGCACATCATCAGCAGCAGCTGCAAAATGAGTCGAGTCTCGGAGATGGTAATATGAATCAAAATCAGCAACAAATTGTTACCGGTAGTACGAATGTGAACGGTGTTATGGGTGCGATGGGAAGGCCAGTTTTGAGGCCAATATCTGATAATATGTGGATGTCACATGGTGACCCTCACATGCCAGGGTTACAACAAATGTTTTCTGGTGGTGGACCAAGGGGAGCACCAGGACTAATGGGAATGGTGGCTGCACAGAGAGGTATAGTTATTCCGTCGATGCATAGACTCCCAATGGGGCCAAATGCATCAGGGAGTAGTATTAATGCAATGCAACAGAAACCAAAAACATATGATGAGGATTTGAAGGAGGATTTGAAGGAATTTGAGGCCATAATTAATAAGAAATCGTTTAGGGAGATGCAAAAATCCAAAACTGGGAAGGAGCTTTTGGATTTAATTCAGAAACCGACTGCAAGGGAGGCTGCTGTAGCTGCTAAGTTCAAAACTAAAGGTGGTTCTCAGGTGAAGCAATATTGTGACTTACTGACAAAAGAAGATTGTCGGCGCCAGACCGGTTCCTTTGTTGCATGTAATAAGGTTCATTTTAGACGAATCATTGCTCTTCACACTGACATTAATTTGGGAGACTGTTCTTTTCTTGATACTTGCCGGCACATGAAGACATGTAAATATGTTCACTATGAGTATGACCCAACACCTGATTTGCCTCCAACAATGACGGGTGCTCTTCCTCCTCCTCCCAAACCACTAAAACAGCAGCGTGCTGAGTATTGTTCTGAAGTGGAACTTGGTGAACCACAATGGATCAACTGTGATATACGTAACTTTAGAATGGACATATTAGGTAAGTTTGGAGTAATAATGGCTGATCCACCGTGGGACATTCACATGGAGCTGCCTTATGGAACAATGGCGGATGATGAAATGCGCACTCTTAATGTCCCTGCTCTGCAAACTCATGGGCTTATTTTTCTATGGGTCACTGGGCGTGCAATGGAACTTGGACGAGAATGCTTAGAACTTTGGGGATATAAACGTGTTGAGGAGATCATTTGGGTGAAAACAAATCAACTTCAGCGAATAATTAGAACTGGACGTACCGGCCATTGGCTCAATCACAGCAAGGAACATTGTCTCGTTGGGATAAAGGGTAGTCCTGAAGTAAACAGAAACATTGACACCGATGTTATTGTCGCTGAAGTCCGGGAAACAAGCCGAAAGCCAGATGAGATGTATCCTTTGTTGGAGAGGATAAGTCCAAGAACAAGAAAGCTGGAGTTGTTTGCTCGCATGCACAATACTCATGCAGGGTGGATGTCTCTTGGTAATCAATTGAGTGGTGTAAGGTTAGTAGATGAAGGGCTCCGGGCAAGGTTTAAGGCAGCTTATCCAGATGTGGAGGTGCAGCCAGCATCACCTCCCAGAGCTTCTGCTATGGAGGTAGACTCTAGTGTTGCTGCTCAAACAAGGAGTCCATTTGCCGGCACAGAATCAAAGTCCACTGCTGAGCCTGCAGCTCCAGCAACTACCTCTGCTTCAGAGGAGAAGGCGATGGTCATTGACGTGGACACTAACTAA
Protein sequence

>Msa0708250

MDMETDEGLNSIKDIRQQLEARIETQHKSHMDMLSSVQSVIPNLVSSLDLSLKVLSSFNHRPFAPTPPLPPPLTNFNPPKSSLQQLPQNPSNNNNNNLQNPKTSLVTTNPEPEKVSPLSIVRSMVAVCLLSRVPFSPIDSSTLLWKLENDQTVTPQDKAALQELGGDSGGPTLAVEIALRSMADDNGAVELEEFVVSGKSRIMVLNIERTRLLREFPETAHHQQQLQNESSLGDGNMNQNQQQIVTGSTNVNGVMGAMGRPVLRPISDNMWMSHGDPHMPGLQQMFSGGGPRGAPGLMGMVAAQRGIVIPSMHRLPMGPNASGSSINAMQQKPKTYDEDLKEDLKEFEAIINKKSFREMQKSKTGKELLDLIQKPTAREAAVAAKFKTKGGSQVKQYCDLLTKEDCRRQTGSFVACNKVHFRRIIALHTDINLGDCSFLDTCRHMKTCKYVHYEYDPTPDLPPTMTGALPPPPKPLKQQRAEYCSEVELGEPQWINCDIRNFRMDILGKFGVIMADPPWDIHMELPYGTMADDEMRTLNVPALQTHGLIFLWVTGRAMELGRECLELWGYKRVEEIIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGSPEVNRNIDTDVIVAEVRETSRKPDEMYPLLERISPRTRKLELFARMHNTHAGWMSLGNQLSGVRLVDEGLRARFKAAYPDVEVQPASPPRASAMEVDSSVAAQTRSPFAGTESKSTAEPAAPATTSASEEKAMVIDVDTN*