AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0752700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0752700 MtrunA17_Chr5g0396811 99.422 692 4 0 1 692 1 692 0.0 1406
Msa0752700 MtrunA17_Chr6g0488381 93.966 696 40 2 1 695 1 695 0.0 1318
Msa0752700 MtrunA17_Chr4g0066781 65.753 365 107 5 329 691 71 419 2.98e-158 463
Msa0752700 MtrunA17_Chr4g0066781 31.804 327 193 12 10 318 5 319 1.01e-28 119
Msa0752700 MtrunA17_Chr7g0254051 75.083 301 61 5 2 297 3 294 4.83e-155 450
Msa0752700 MtrunA17_Chr7g0254051 30.290 241 133 9 383 616 84 296 5.12e-21 94.4
Msa0752700 MtrunA17_Chr7g0254051 24.123 228 144 5 264 486 86 289 4.83e-11 64.3
Msa0752700 MtrunA17_Chr4g0066771 67.614 352 107 4 329 677 82 429 5.05e-154 452
Msa0752700 MtrunA17_Chr4g0066771 30.383 339 202 11 7 318 2 333 9.92e-29 119
Msa0752700 MtrunA17_Chr4g0003621 85.135 74 11 0 268 341 13 86 1.02e-36 132
Msa0752700 MtrunA17_Chr2g0281221 26.235 324 194 11 92 380 436 749 1.11e-17 87.8
Msa0752700 MtrunA17_Chr2g0281221 25.911 247 172 5 90 325 526 772 7.46e-15 78.6
Msa0752700 MtrunA17_Chr4g0003611 77.551 49 9 1 361 409 2 48 1.16e-17 78.2
Msa0752700 MtrunA17_Chr1g0148901 24.686 478 293 17 63 507 225 668 2.02e-13 73.9
Msa0752700 MtrunA17_Chr1g0148901 21.461 438 283 14 93 506 482 882 4.08e-12 69.7
Msa0752700 MtrunA17_Chr7g0242541 22.711 546 325 17 62 546 360 869 5.88e-13 72.8
Msa0752700 MtrunA17_Chr4g0068341 23.102 303 199 6 90 362 220 518 5.00e-12 69.3
Msa0752700 MtrunA17_Chr6g0460371 25.121 207 144 5 113 313 254 455 4.41e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0752700 AT5G41770.1 81.197 702 124 1 2 695 3 704 0.0 1160
Msa0752700 AT5G45990.2 77.193 684 146 2 7 689 4 678 0.0 1073
Msa0752700 AT5G45990.1 77.548 677 142 2 14 689 1 668 0.0 1065
Msa0752700 AT3G13210.1 69.209 695 165 4 1 690 1 651 0.0 940
Msa0752700 AT3G51110.1 74.564 401 99 3 26 423 5 405 0.0 622
Msa0752700 AT3G51110.1 26.346 353 217 11 227 560 73 401 1.08e-19 92.8
Msa0752700 AT3G51110.1 27.541 305 180 12 385 681 73 344 4.40e-19 90.9
Msa0752700 AT4G03430.2 23.892 519 314 16 73 547 369 850 4.21e-17 86.3
Msa0752700 AT4G03430.3 23.892 519 314 16 73 547 369 850 4.21e-17 86.3
Msa0752700 AT4G03430.1 23.892 519 314 16 73 547 369 850 4.21e-17 86.3
Msa0752700 AT5G28740.1 24.847 326 200 12 92 382 424 739 2.21e-16 84.0
Msa0752700 AT1G17760.1 26.442 208 144 5 114 317 255 457 2.44e-13 73.9
Msa0752700 AT3G17040.2 23.284 335 224 13 104 432 181 488 2.44e-11 67.4
Msa0752700 AT3G17040.1 23.284 335 224 13 104 432 215 522 3.26e-11 67.0

Find 183 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAGCAGCTAAGTCAATTT+TGG 0.148243 5_2:-6446564 Msa0752700:three_prime_UTR
TCTTCTCTTCTTGAGCTTCT+TGG 0.162393 5_2:+6447004 None:intergenic
ACGGGTGCTCGTCAAATATT+AGG 0.182901 5_2:-6448165 Msa0752700:CDS
TACACGTGCGCGTTCGGTTT+GGG 0.226321 5_2:-6451805 Msa0752700:CDS
TAGGGTTGGGTCTGCATCTT+TGG 0.247775 5_2:+6452115 None:intergenic
AAAACTATATGAAAAGTATT+TGG 0.269243 5_2:-6447959 Msa0752700:CDS
GGAAGAGAGTGTCGGGAATA+AGG 0.273700 5_2:-6451079 Msa0752700:CDS
TAGTATGTTACCTTATCTTT+AGG 0.282919 5_2:+6448123 None:intergenic
TACACTCAATAATTGACTTT+TGG 0.285823 5_2:+6446381 None:intergenic
CTTCCTCTTTCTCTATCGTT+AGG 0.293521 5_2:-6452166 Msa0752700:five_prime_UTR
CTCAACTTGGAGGCTTCATC+TGG 0.300668 5_2:-6447065 Msa0752700:CDS
CTTCTCTTCTTGAGCTTCTT+GGG 0.305265 5_2:+6447005 None:intergenic
TTACACGTGCGCGTTCGGTT+TGG 0.307935 5_2:-6451806 Msa0752700:CDS
CTACTGAAGATGGTTCTTCT+AGG 0.309477 5_2:-6446974 Msa0752700:intron
AGATGAGAGTTTAGAATTAT+CGG 0.314452 5_2:-6447322 Msa0752700:CDS
AGTTCTCATTTGCAAAGATA+TGG 0.344500 5_2:-6448227 Msa0752700:CDS
TTAATCATGCGAGGAATGTT+TGG 0.350016 5_2:-6451704 Msa0752700:CDS
GAGATGCTTGGCAATGTCGC+TGG 0.357091 5_2:-6451618 Msa0752700:CDS
TGCTCCGCTGTGATTTGAAT+TGG 0.358671 5_2:+6452020 None:intergenic
TTCGGTGGAATGTCAGTGTT+TGG 0.362517 5_2:-6451866 Msa0752700:CDS
TCTTTGCAAATGAGAACTTC+TGG 0.364205 5_2:+6448232 None:intergenic
TCAGCTGACGTATTTCAAAC+TGG 0.364851 5_2:+6448193 None:intergenic
AGGATTTAATCCGGAGAGTT+CGG 0.371102 5_2:-6451884 Msa0752700:CDS
CAATGTCGCTGGGGCGAGGC+AGG 0.375002 5_2:-6451607 Msa0752700:CDS
CAAATATTAGGGAATGCTAT+TGG 0.375651 5_2:-6448153 Msa0752700:CDS
GCTTCTTGGGCAGCTTAGAC+TGG 0.380324 5_2:+6447018 None:intergenic
AGAACTTCTGGTGAGGTATC+TGG 0.391393 5_2:+6448244 None:intergenic
GTGGTTTGATTATATAAGAT+TGG 0.396082 5_2:-6451100 Msa0752700:CDS
CAGCTGAGGAGAAGCGATAC+TGG 0.397271 5_2:-6451011 Msa0752700:CDS
ATCCGTTGAATTATGATTCG+TGG 0.398953 5_2:-6451119 Msa0752700:CDS
CGTCATTAAGGAAATGTGTA+AGG 0.403988 5_2:-6446410 Msa0752700:three_prime_UTR
TTGAGAAACAGTATGGTGAT+AGG 0.405534 5_2:-6451206 Msa0752700:CDS
TAATCATGCGAGGAATGTTT+GGG 0.406922 5_2:-6451703 Msa0752700:CDS
TCTCAAATGCCACAAACTTC+CGG 0.412003 5_2:+6451223 None:intergenic
GGCTTCCATGATCTTGAGAT+TGG 0.414299 5_2:+6446694 None:intergenic
TTCCTCTTTCTCTATCGTTA+GGG 0.418812 5_2:-6452165 Msa0752700:five_prime_UTR
ACTTAAGCTACAGTATTTGC+CGG 0.422778 5_2:+6446586 None:intergenic
AGGCATGTCCAATGCTGGTT+GGG 0.424214 5_2:+6447834 None:intergenic
TGATCGAACAAAGCACTTGA+AGG 0.427591 5_2:-6447382 Msa0752700:CDS
GGGATTGAGGATGCTATTGT+TGG 0.433244 5_2:-6451180 Msa0752700:CDS
AAGAAGACATGGCTAAGGTT+TGG 0.439415 5_2:+6452138 None:intergenic
TGCAATTGCCCAACCAGCAT+TGG 0.442244 5_2:-6447842 Msa0752700:CDS
GGGCAATGCTATTAGAGAAA+TGG 0.442491 5_2:-6447088 Msa0752700:CDS
TCATGGAAGCCGCTTACAAA+TGG 0.446443 5_2:-6446682 Msa0752700:CDS
AGATGCTTGGCAATGTCGCT+GGG 0.449067 5_2:-6451617 Msa0752700:CDS
AAAGAGGAAGAAGACGATAC+AGG 0.450856 5_2:+6452179 None:intergenic
GGAGTTTGAGGAAAGGTGTA+AGG 0.453060 5_2:-6451319 Msa0752700:CDS
TTCGGTTTGGGAACGAGCAT+TGG 0.457130 5_2:-6451793 Msa0752700:CDS
TCAACTTGGAGGCTTCATCT+GGG 0.458678 5_2:-6447064 Msa0752700:CDS
GAGGCTTCATCTGGGGAGCT+AGG 0.458747 5_2:-6447056 Msa0752700:CDS
GATAACCATCCTTGCTGATC+CGG 0.459943 5_2:+6451558 None:intergenic
TGTGGCGTTTGCGGAGTTTG+AGG 0.461569 5_2:-6451331 Msa0752700:CDS
GAGTGAGATAACCTAGGGTT+GGG 0.463081 5_2:+6452102 None:intergenic
CTCGCCGAGTTCGGTTGAAT+CGG 0.463406 5_2:+6451935 None:intergenic
TTGGTTGAATGTGTTTCCTC+GGG 0.468573 5_2:+6446713 None:intergenic
TTGGCAATGTCGCTGGGGCG+AGG 0.468746 5_2:-6451611 Msa0752700:CDS
GGCAGCGCTATATTTATTTG+TGG 0.468806 5_2:-6450990 Msa0752700:intron
TCCAGATTTAAAAGAAGAAA+GGG 0.469041 5_2:-6447108 Msa0752700:CDS
CTCCAGATTTAAAAGAAGAA+AGG 0.471933 5_2:-6447109 Msa0752700:CDS
CGCTGTGATTTGAATTGGAG+CGG 0.473589 5_2:+6452025 None:intergenic
GTGGCATTTGAGAAACAGTA+TGG 0.475591 5_2:-6451213 Msa0752700:CDS
TGCCTGTTTAGAGGTGTTTG+AGG 0.476347 5_2:-6447159 Msa0752700:intron
GGATTTGTACCGGAAGTTTG+TGG 0.478503 5_2:-6451232 Msa0752700:CDS
GTAAGGAGGCAGAGCGTGCT+AGG 0.478780 5_2:-6451302 Msa0752700:CDS
TGGTGATAGGGAAGGGATTG+AGG 0.479307 5_2:-6451193 Msa0752700:CDS
TCAAGCTTCCACGTCCAACT+AGG 0.480728 5_2:-6452064 Msa0752700:CDS
AGACAAGTTTCTACTGAAGA+TGG 0.481734 5_2:-6446984 Msa0752700:CDS
TCATAAACATTCCTCGCCTT+AGG 0.481974 5_2:+6451402 None:intergenic
GAGACGATACTCGCCGAGTT+CGG 0.482763 5_2:+6451926 None:intergenic
CGGGTGCTCGTCAAATATTA+GGG 0.485586 5_2:-6448164 Msa0752700:CDS
TTCAACCAATCTCAAGATCA+TGG 0.485593 5_2:-6446699 Msa0752700:CDS
ATTATCGGAACAAGAACAAA+AGG 0.485892 5_2:-6447307 Msa0752700:CDS
AGGAATTCGAGGATTTAATC+CGG 0.486582 5_2:-6451893 Msa0752700:CDS
CAGTATCGCTTCTCCTCAGC+TGG 0.490512 5_2:+6451012 None:intergenic
AAATCCTCAGCCCTCCCCTT+CGG 0.491990 5_2:+6451249 None:intergenic
GTCATCCTAGGGTTGGTGCT+TGG 0.492213 5_2:-6451464 Msa0752700:CDS
AACAGTATGGTGATAGGGAA+GGG 0.497023 5_2:-6451200 Msa0752700:CDS
AGCAAATTCTTCGTGAAGCT+AGG 0.502033 5_2:-6452001 Msa0752700:CDS
AACTCAGGCATGTCCAATGC+TGG 0.504518 5_2:+6447829 None:intergenic
TAAGATTGGAAGAGAGTGTC+GGG 0.508930 5_2:-6451086 Msa0752700:CDS
ATTGGTTGAATGTGTTTCCT+CGG 0.509385 5_2:+6446712 None:intergenic
CGAGTGAGATAACCTAGGGT+TGG 0.511421 5_2:+6452101 None:intergenic
GAAGAATGGCGAGGTTCCTA+AGG 0.514090 5_2:-6451418 Msa0752700:CDS
GCTGTGATTTGAATTGGAGC+GGG 0.516717 5_2:+6452026 None:intergenic
TGCGGTTACTCTCTTGCCGC+GGG 0.517611 5_2:-6451676 Msa0752700:CDS
CAGCTGACGTATTTCAAACT+GGG 0.517928 5_2:+6448194 None:intergenic
ATGCTATTGTTGGGAAGAGA+AGG 0.518921 5_2:-6451170 Msa0752700:CDS
GTATCGTCTCCGGAAAAGAA+AGG 0.519406 5_2:-6451913 Msa0752700:CDS
GTGGTATAAGTATATTCATA+TGG 0.521111 5_2:-6451643 Msa0752700:CDS
ATTAGAGAAATGGCTCAACT+TGG 0.521804 5_2:-6447078 Msa0752700:CDS
ATCACCGATTCAACCGAACT+CGG 0.523459 5_2:-6451939 Msa0752700:CDS
AATAAGAGTATCTTGTAGCT+TGG 0.524038 5_2:-6446631 Msa0752700:exon
CTCTATGAAGAACTCGATGC+TGG 0.524471 5_2:-6450852 Msa0752700:CDS
AACCCTAACGATAGAGAAAG+AGG 0.524499 5_2:+6452163 None:intergenic
TGGAAAGGCTCCTAAAGATA+AGG 0.526946 5_2:-6448133 Msa0752700:intron
TGAGAAACAGTATGGTGATA+GGG 0.526975 5_2:-6451205 Msa0752700:CDS
AGAGAAATGGCTCAACTTGG+AGG 0.527102 5_2:-6447075 Msa0752700:CDS
TTTGCCGGGTTATACAAGAA+TGG 0.532683 5_2:+6446601 None:intergenic
CCGGAAAAGAAAGGAATTCG+AGG 0.534313 5_2:-6451904 Msa0752700:CDS
GAACAAAGCACTTGAAGGTA+TGG 0.535144 5_2:-6447377 Msa0752700:CDS
CAAGCTTCCACGTCCAACTA+GGG 0.535750 5_2:-6452063 Msa0752700:CDS
TGACATTCCACCGAACTCTC+CGG 0.537024 5_2:+6451874 None:intergenic
CAGGCATGTCCAATGCTGGT+TGG 0.538335 5_2:+6447833 None:intergenic
GCGAAGTTTGAGATGAAGAA+TGG 0.539929 5_2:-6451432 Msa0752700:CDS
AAACAGTATGGTGATAGGGA+AGG 0.543304 5_2:-6451201 Msa0752700:CDS
GGATTGAGGATGCTATTGTT+GGG 0.544390 5_2:-6451179 Msa0752700:CDS
ATTCATATGGAGGAGATGCT+TGG 0.545848 5_2:-6451630 Msa0752700:CDS
GAGCAAGAGCGCTTTATGAA+AGG 0.547966 5_2:-6447410 Msa0752700:CDS
TGCACTTGATCATATTCCGA+AGG 0.550436 5_2:-6451265 Msa0752700:CDS
TTGCTTCTTCCATTTGTAAG+CGG 0.551687 5_2:+6446673 None:intergenic
TCGGGAATAAGGAAAGAACT+AGG 0.555595 5_2:-6451068 Msa0752700:CDS
CTTAAGCTACAGTATTTGCC+GGG 0.555956 5_2:+6446587 None:intergenic
TGGACATGCCTGAGTTGTTG+TGG 0.557171 5_2:-6447822 Msa0752700:CDS
TTTGGAAGAAGACATGGCTA+AGG 0.557300 5_2:+6452133 None:intergenic
TTGGATTAAGTATGCACAGT+GGG 0.558600 5_2:-6451847 Msa0752700:CDS
CACCTGAAAATTGCTATGCA+TGG 0.558764 5_2:-6447930 Msa0752700:CDS
GTGCGGTTACTCTCTTGCCG+CGG 0.562369 5_2:-6451677 Msa0752700:CDS
GCAAATTCTTCGTGAAGCTA+GGG 0.562667 5_2:-6452000 Msa0752700:CDS
CAACTTGGAGGCTTCATCTG+GGG 0.564192 5_2:-6447063 Msa0752700:CDS
TTCTTAACCCTAGTTGGACG+TGG 0.565614 5_2:+6452056 None:intergenic
CGTTTGCGGAGTTTGAGGAA+AGG 0.569334 5_2:-6451326 Msa0752700:CDS
CTGTGATTTGAATTGGAGCG+GGG 0.569424 5_2:+6452027 None:intergenic
AGAACTCGATGCTGGAGACA+TGG 0.569993 5_2:-6450844 Msa0752700:CDS
ATACGTCAGCTGAATCTCAC+GGG 0.570788 5_2:-6448183 Msa0752700:CDS
ACATACTTCTCGCACGCTGA+AGG 0.571646 5_2:+6447277 None:intergenic
TATTCCGAAGGGGAGGGCTG+AGG 0.571654 5_2:-6451253 Msa0752700:CDS
AACGAGATCGAACGAGCGAG+AGG 0.571936 5_2:-6451510 Msa0752700:CDS
TTCAGTATGAAGATGAAGTG+AGG 0.574668 5_2:-6451146 Msa0752700:CDS
GAGATGGATGAAATGGATGC+CGG 0.575668 5_2:-6451577 Msa0752700:CDS
ACGAGATCGAACGAGCGAGA+GGG 0.576648 5_2:-6451509 Msa0752700:CDS
GGATGCCGGATCAGCAAGGA+TGG 0.580624 5_2:-6451563 Msa0752700:CDS
GCACTTGATCATATTCCGAA+GGG 0.581118 5_2:-6451264 Msa0752700:CDS
AACTCGGCGAGTATCGTCTC+CGG 0.581315 5_2:-6451923 Msa0752700:CDS
CGTATCCAAGCACCAACCCT+AGG 0.581983 5_2:+6451459 None:intergenic
TGGACGTGGAAGCTTGACTT+CGG 0.584194 5_2:+6452070 None:intergenic
TGCATCTTTGGAAGAAGACA+TGG 0.584680 5_2:+6452127 None:intergenic
TGCTCTATCAAATTCACACT+CGG 0.591262 5_2:+6447428 None:intergenic
GGAGAAGCTAGCGGATGATG+AGG 0.592283 5_2:-6451370 Msa0752700:CDS
ATTAGGGAATGCTATTGGAA+AGG 0.592842 5_2:-6448148 Msa0752700:CDS
ATTAAGGAAATGTGTAAGGT+CGG 0.598325 5_2:-6446406 Msa0752700:three_prime_UTR
GGAAGAAGACGATACAGGAA+AGG 0.598467 5_2:+6452184 None:intergenic
ATAAGATTGGAAGAGAGTGT+CGG 0.599092 5_2:-6451087 Msa0752700:CDS
TGCCGCGGGTGGATCAGTTG+TGG 0.601214 5_2:-6451662 Msa0752700:CDS
TGATCATATTCCGAAGGGGA+GGG 0.601416 5_2:-6451259 Msa0752700:CDS
AAAGATGCAGACCCAACCCT+AGG 0.601930 5_2:-6452113 Msa0752700:CDS
TGTACCTTCCACAACAACTC+AGG 0.605321 5_2:+6447814 None:intergenic
GGTTACTCTCTTGCCGCGGG+TGG 0.606774 5_2:-6451673 Msa0752700:CDS
ATTTAATCCGGAGAGTTCGG+TGG 0.620567 5_2:-6451881 Msa0752700:CDS
AGCTAATGTTCCTCCAGCTG+AGG 0.621589 5_2:-6451025 Msa0752700:CDS
GTATAAGTATATTCATATGG+AGG 0.621913 5_2:-6451640 Msa0752700:CDS
CACTTGATCATATTCCGAAG+GGG 0.622291 5_2:-6451263 Msa0752700:CDS
CTGGAGCTGATGATCTGAAG+TGG 0.624411 5_2:+6447126 None:intergenic
ATAAGTTTATTAATCATGCG+AGG 0.627758 5_2:-6451713 Msa0752700:CDS
CGGGAATAAGGAAAGAACTA+GGG 0.627920 5_2:-6451067 Msa0752700:CDS
AATACGTCAGCTGAATCTCA+CGG 0.630113 5_2:-6448184 Msa0752700:CDS
ATAGAGATAGAACTGCAGCT+TGG 0.631167 5_2:-6448000 Msa0752700:CDS
TATCGCTTCTCCTCAGCTGG+AGG 0.632169 5_2:+6451015 None:intergenic
TTGATCATATTCCGAAGGGG+AGG 0.638933 5_2:-6451260 Msa0752700:CDS
GGAGGGCTGAGGATTTGTAC+CGG 0.641247 5_2:-6451242 Msa0752700:CDS
GATTCCATTCTTGTATAACC+CGG 0.642262 5_2:-6446605 Msa0752700:three_prime_UTR
AACCACGAATCATAATTCAA+CGG 0.642901 5_2:+6451117 None:intergenic
GCAAATGAGAACTTCTGGTG+AGG 0.644406 5_2:+6448237 None:intergenic
GTTTGAGGAAAGGTGTAAGG+AGG 0.647717 5_2:-6451316 Msa0752700:CDS
ATGGCGAGGTTCCTAAGGCG+AGG 0.653917 5_2:-6451413 Msa0752700:CDS
TATATGAAAAGTATTTGGAG+TGG 0.655469 5_2:-6447954 Msa0752700:CDS
ATTATAAGAATCATACTCTG+TGG 0.659123 5_2:-6451764 Msa0752700:CDS
TGTGATTTGAATTGGAGCGG+GGG 0.661037 5_2:+6452028 None:intergenic
AAATGGATGCCGGATCAGCA+AGG 0.663884 5_2:-6451567 Msa0752700:CDS
GTTTGAGATGAAGAATGGCG+AGG 0.666538 5_2:-6451427 Msa0752700:CDS
ACAGTGGGAAGAGTCGCAGA+AGG 0.666855 5_2:-6451832 Msa0752700:CDS
CATGCCTGAGTTGTTGTGGA+AGG 0.673647 5_2:-6447818 Msa0752700:intron
GAATGTTTATGAGAGAGCGG+TGG 0.675482 5_2:-6451391 Msa0752700:CDS
GAGGAATGTTTGGGATCGTG+CGG 0.677707 5_2:-6451694 Msa0752700:CDS
TACCACAACTGATCCACCCG+CGG 0.678557 5_2:+6451660 None:intergenic
GATGCTTGGCAATGTCGCTG+GGG 0.678951 5_2:-6451616 Msa0752700:CDS
AAATTGTGAATTGAAAGTCA+TGG 0.679573 5_2:-6446450 Msa0752700:three_prime_UTR
GAGGAATGTTTATGAGAGAG+CGG 0.686113 5_2:-6451394 Msa0752700:CDS
GAGAGCGGTGGAGAAGCTAG+CGG 0.689654 5_2:-6451379 Msa0752700:CDS
GAATAAGGAAAGAACTAGGG+AGG 0.691859 5_2:-6451064 Msa0752700:CDS
TGGTTGAATGTGTTTCCTCG+GGG 0.698716 5_2:+6446714 None:intergenic
CGCTCCAATTCAAATCACAG+CGG 0.734163 5_2:-6452024 Msa0752700:CDS
TATCGACTATCTATTCCCCG+AGG 0.735748 5_2:-6446729 Msa0752700:CDS
TTTGGATTAAGTATGCACAG+TGG 0.776258 5_2:-6451848 Msa0752700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAGTTGAAATAAAAAT+AGG + chr5_2:6448965-6448984 None:intergenic 10.0%
!!! TATTGTAAGCATATTTTTTA+CGG - chr5_2:6447780-6447799 Msa0752700:intron 15.0%
!! TACATATTAATAATGACTAT+AGG - chr5_2:6448066-6448085 Msa0752700:intron 15.0%
!!! TTTTCTTGAATTGATAAATT+GGG - chr5_2:6449119-6449138 Msa0752700:intron 15.0%
!!! TCATTTTGAAACAAATTTTT+TGG + chr5_2:6449440-6449459 None:intergenic 15.0%
!!! TCTTTTTTCTTATAAAGTAA+GGG - chr5_2:6449569-6449588 Msa0752700:intron 15.0%
!!! GATTTTTTATTTTGAAAACT+TGG + chr5_2:6449788-6449807 None:intergenic 15.0%
!!! AAAACTATATGAAAAGTATT+TGG - chr5_2:6450533-6450552 Msa0752700:intron 15.0%
!!! ATATTAACAATTTTACAGTT+AGG + chr5_2:6451015-6451034 None:intergenic 15.0%
!! TTTATTAACAAATTTAACAC+AGG + chr5_2:6451672-6451691 None:intergenic 15.0%
!!! TTTAAATTCTATTTTTTTGC+TGG - chr5_2:6452168-6452187 Msa0752700:five_prime_UTR 15.0%
!! AGAGATTTAAATAAAATGCT+TGG + chr5_2:6447718-6447737 None:intergenic 20.0%
!!! TATTTAAATCTCTGTTTTGT+TGG - chr5_2:6447725-6447744 Msa0752700:intron 20.0%
!! AAAAAATATGCTTACAATAC+AGG + chr5_2:6447779-6447798 None:intergenic 20.0%
!!! ATTGTAAGCATATTTTTTAC+GGG - chr5_2:6447781-6447800 Msa0752700:intron 20.0%
!!! TAATTAAACCATTCTAAAAG+AGG + chr5_2:6448026-6448045 None:intergenic 20.0%
!! CCTAAATTTGATTGATTAAA+GGG + chr5_2:6448460-6448479 None:intergenic 20.0%
!! TCCTAAATTTGATTGATTAA+AGG + chr5_2:6448461-6448480 None:intergenic 20.0%
!! GCATGAATTATTAATTCAAT+CGG + chr5_2:6448607-6448626 None:intergenic 20.0%
!! TTGAATTAATAATTCATGCT+TGG - chr5_2:6448608-6448627 Msa0752700:intron 20.0%
!! TTATAGTGTAGATAAAATAG+TGG - chr5_2:6448701-6448720 Msa0752700:intron 20.0%
!!! AAATAGTGGTTTTTTATTTG+AGG - chr5_2:6448715-6448734 Msa0752700:intron 20.0%
!!! AAAGTCAAGGTTTTAAATTT+TGG + chr5_2:6448877-6448896 None:intergenic 20.0%
!! ATAATTCAAACATAAAGTCA+AGG + chr5_2:6448890-6448909 None:intergenic 20.0%
!! GTTGAAATAAAAATAGGAAT+TGG + chr5_2:6448959-6448978 None:intergenic 20.0%
!!! GTTTTCTTGAATTGATAAAT+TGG - chr5_2:6449118-6449137 Msa0752700:intron 20.0%
!!! TATTTTCCTAGATAATGAAA+TGG - chr5_2:6449242-6449261 Msa0752700:intron 20.0%
!! AAATTTATTACTAACATGTG+TGG + chr5_2:6449364-6449383 None:intergenic 20.0%
!! GTAAGAAATTAAAGTTGTAT+TGG + chr5_2:6449479-6449498 None:intergenic 20.0%
!!! GTCTTTTTTCTTATAAAGTA+AGG - chr5_2:6449568-6449587 Msa0752700:intron 20.0%
!! AAATTAATTACTAACATGAG+TGG + chr5_2:6449709-6449728 None:intergenic 20.0%
! ATTATAAGAATCATACTCTG+TGG - chr5_2:6446728-6446747 Msa0752700:CDS 25.0%
! ATAAGTTTATTAATCATGCG+AGG - chr5_2:6446779-6446798 Msa0752700:intron 25.0%
! GTGGTATAAGTATATTCATA+TGG - chr5_2:6446849-6446868 Msa0752700:intron 25.0%
! GTATAAGTATATTCATATGG+AGG - chr5_2:6446852-6446871 Msa0752700:intron 25.0%
! GTGGTTTGATTATATAAGAT+TGG - chr5_2:6447392-6447411 Msa0752700:CDS 25.0%
!!! ATTGATTTTGCATTTTCTTG+TGG - chr5_2:6447575-6447594 Msa0752700:intron 25.0%
! TATTTGTCTGTGTATAACTT+AGG - chr5_2:6447605-6447624 Msa0752700:intron 25.0%
!!! TTGTAAGCATATTTTTTACG+GGG - chr5_2:6447782-6447801 Msa0752700:intron 25.0%
!!! TAAAATAGCCTCTTTTAGAA+TGG - chr5_2:6448015-6448034 Msa0752700:CDS 25.0%
!! ATCAAAAGCACAACAAAAAT+AGG + chr5_2:6448414-6448433 None:intergenic 25.0%
!!! TTTTGTTGTGCTTTTGATAT+TGG - chr5_2:6448416-6448435 Msa0752700:intron 25.0%
! CCCTTTAATCAATCAAATTT+AGG - chr5_2:6448457-6448476 Msa0752700:intron 25.0%
!! AAATTTAGGAGTGTGTATAT+AGG - chr5_2:6448471-6448490 Msa0752700:intron 25.0%
! ATTATAGAAAAAACCAACAC+CGG + chr5_2:6448558-6448577 None:intergenic 25.0%
!!! GTTTTTTCTATAATTGCTTC+TGG - chr5_2:6448564-6448583 Msa0752700:intron 25.0%
!!! ACACAGTATCTGTTTTTTAT+TGG - chr5_2:6448786-6448805 Msa0752700:intron 25.0%
! ACTAACTAACTACTACTTAA+GGG + chr5_2:6448823-6448842 None:intergenic 25.0%
! AACTAACTAACTACTACTTA+AGG + chr5_2:6448824-6448843 None:intergenic 25.0%
! TAAGTAGTAGTTAGTTAGTT+AGG - chr5_2:6448824-6448843 Msa0752700:intron 25.0%
!! TCGTCTTAATATTTTACTAG+AGG + chr5_2:6448918-6448937 None:intergenic 25.0%
! GAATTGGAGAATGAATAATA+GGG + chr5_2:6448943-6448962 None:intergenic 25.0%
!!! AATCATAGGGTCTATTTTTA+TGG + chr5_2:6449055-6449074 None:intergenic 25.0%
!!! TTTTTGGGAAAACAATCATA+GGG + chr5_2:6449068-6449087 None:intergenic 25.0%
!!! TTTTTTGGGAAAACAATCAT+AGG + chr5_2:6449069-6449088 None:intergenic 25.0%
!!! TTGAAACTTTATGGTTTTGA+TGG - chr5_2:6449177-6449196 Msa0752700:intron 25.0%
!! TTTTTCTTATAAAGTAAGGG+CGG - chr5_2:6449572-6449591 Msa0752700:intron 25.0%
!!! TGTTTTTTTTTTACCTTTCC+TGG - chr5_2:6449978-6449997 Msa0752700:intron 25.0%
! TCGAGTTAATTTAGTAAAGA+TGG + chr5_2:6450149-6450168 None:intergenic 25.0%
! ACACTACTTTCATTTCTTTA+GGG - chr5_2:6450215-6450234 Msa0752700:intron 25.0%
! TAGTATGTTACCTTATCTTT+AGG + chr5_2:6450372-6450391 None:intergenic 25.0%
! TATCTGTTGACAAAGATAAA+AGG + chr5_2:6450460-6450479 None:intergenic 25.0%
!!! TATATGAAAAGTATTTGGAG+TGG - chr5_2:6450538-6450557 Msa0752700:intron 25.0%
!! TGAGATATTGACATCTATTT+TGG + chr5_2:6450752-6450771 None:intergenic 25.0%
!! AGATGAGAGTTTAGAATTAT+CGG - chr5_2:6451170-6451189 Msa0752700:CDS 25.0%
! TCCAGATTTAAAAGAAGAAA+GGG - chr5_2:6451384-6451403 Msa0752700:CDS 25.0%
!! GACTTTCAATTCACAATTTT+AGG + chr5_2:6452041-6452060 None:intergenic 25.0%
! AAATTGTGAATTGAAAGTCA+TGG - chr5_2:6452042-6452061 Msa0752700:CDS 25.0%
!!! TACACTCAATAATTGACTTT+TGG + chr5_2:6452114-6452133 None:intergenic 25.0%
!!! ATTTGTTTTGTGTCATCCTA+GGG - chr5_2:6447017-6447036 Msa0752700:CDS 30.0%
AACCACGAATCATAATTCAA+CGG + chr5_2:6447378-6447397 None:intergenic 30.0%
! ATTAGACTAGCAAGATTTTC+AGG + chr5_2:6447815-6447834 None:intergenic 30.0%
! TTTTTATACCAATGAGGTTG+TGG - chr5_2:6447866-6447885 Msa0752700:CDS 30.0%
! TTTTATACCAATGAGGTTGT+GGG - chr5_2:6447867-6447886 Msa0752700:CDS 30.0%
!! AAGAGCTTTATGATCTTTTC+TGG - chr5_2:6447971-6447990 Msa0752700:CDS 30.0%
!! AGAGCTTTATGATCTTTTCT+GGG - chr5_2:6447972-6447991 Msa0752700:CDS 30.0%
TAATAATGACTATAGGTACC+TGG - chr5_2:6448073-6448092 Msa0752700:intron 30.0%
ACTTGATTGTTAGCAATTCT+TGG - chr5_2:6448130-6448149 Msa0752700:intron 30.0%
GTAAAAACCACTATATACAC+TGG + chr5_2:6448755-6448774 None:intergenic 30.0%
AGTAGTTAGTTAGTTAGGTA+AGG - chr5_2:6448829-6448848 Msa0752700:intron 30.0%
GGAATTGGAGAATGAATAAT+AGG + chr5_2:6448944-6448963 None:intergenic 30.0%
TGGTAAGATACATTTCTTGT+GGG - chr5_2:6449005-6449024 Msa0752700:intron 30.0%
! GTTTTCCCAAAAAACATAAG+TGG - chr5_2:6449075-6449094 Msa0752700:intron 30.0%
TCAAGAAAACCAATGTACTA+TGG + chr5_2:6449108-6449127 None:intergenic 30.0%
TTGAATTGATAAATTGGGCT+TGG - chr5_2:6449124-6449143 Msa0752700:intron 30.0%
!! GGGATTGATTTGAAACTTTA+TGG - chr5_2:6449168-6449187 Msa0752700:intron 30.0%
!!! TACTGGTTTTGAGAATAAGA+AGG - chr5_2:6449200-6449219 Msa0752700:intron 30.0%
GTATTTATTGAGGGTAAAGT+TGG + chr5_2:6449504-6449523 None:intergenic 30.0%
!! AAGTTGGGAGTATTTATTGA+GGG + chr5_2:6449513-6449532 None:intergenic 30.0%
TTGGCAAACAGATTAAGAAA+TGG + chr5_2:6449634-6449653 None:intergenic 30.0%
!! TTCATAATGAGTGTCGTTTA+AGG + chr5_2:6449659-6449678 None:intergenic 30.0%
AAACGACACTCATTATGAAA+CGG - chr5_2:6449660-6449679 Msa0752700:intron 30.0%
CAGTTTGATAGATAGAATAG+TGG - chr5_2:6449814-6449833 Msa0752700:intron 30.0%
GGATAGTGCATATTAAGATT+AGG - chr5_2:6449835-6449854 Msa0752700:intron 30.0%
TAGTGCATATTAAGATTAGG+AGG - chr5_2:6449838-6449857 Msa0752700:intron 30.0%
TATTAAGATTAGGAGGAGAT+TGG - chr5_2:6449845-6449864 Msa0752700:intron 30.0%
AGGTTAAACTAGAAAGTCAA+TGG + chr5_2:6450106-6450125 None:intergenic 30.0%
!!! CTTTCTAGTTTAACCTTTTC+TGG - chr5_2:6450110-6450129 Msa0752700:intron 30.0%
AAGTAGTGTCAATACTTAGT+AGG + chr5_2:6450204-6450223 None:intergenic 30.0%
GACACTACTTTCATTTCTTT+AGG - chr5_2:6450214-6450233 Msa0752700:intron 30.0%
AGTTCTCATTTGCAAAGATA+TGG - chr5_2:6450265-6450284 Msa0752700:intron 30.0%
CAAATATTAGGGAATGCTAT+TGG - chr5_2:6450339-6450358 Msa0752700:intron 30.0%
TCTATATTAGAAGCTTCCAT+AGG + chr5_2:6450899-6450918 None:intergenic 30.0%
GAGAAAGAGAAATCACATTA+AGG + chr5_2:6450931-6450950 None:intergenic 30.0%
ATTATCGGAACAAGAACAAA+AGG - chr5_2:6451185-6451204 Msa0752700:CDS 30.0%
CTCCAGATTTAAAAGAAGAA+AGG - chr5_2:6451383-6451402 Msa0752700:CDS 30.0%
!! TTTCCAAGGGTTAGTTTATA+TGG - chr5_2:6451574-6451593 Msa0752700:CDS 30.0%
CAAATTGAGAAGAATGAAGT+AGG + chr5_2:6451722-6451741 None:intergenic 30.0%
!! CTCAATTTGATTTTGCAGAA+TGG - chr5_2:6451733-6451752 Msa0752700:CDS 30.0%
!! AATAAGAGTATCTTGTAGCT+TGG - chr5_2:6451861-6451880 Msa0752700:CDS 30.0%
! TTAAGCAGCTAAGTCAATTT+TGG - chr5_2:6451928-6451947 Msa0752700:CDS 30.0%
! TAAGCAGCTAAGTCAATTTT+GGG - chr5_2:6451929-6451948 Msa0752700:CDS 30.0%
! ACTTGTGATTTTCGTCATTA+AGG - chr5_2:6452070-6452089 Msa0752700:CDS 30.0%
ATTAAGGAAATGTGTAAGGT+CGG - chr5_2:6452086-6452105 Msa0752700:CDS 30.0%
TTCCTCTTTCTCTATCGTTA+GGG - chr5_2:6446327-6446346 Msa0752700:three_prime_UTR 35.0%
!!! TTTTCGAGTGAGATAACCTA+GGG + chr5_2:6446398-6446417 None:intergenic 35.0%
!! GTTTTGTTCTTAACCCTAGT+TGG + chr5_2:6446445-6446464 None:intergenic 35.0%
! GAATCGGTGATTTTCTGTTT+CGG + chr5_2:6446544-6446563 None:intergenic 35.0%
AGGAATTCGAGGATTTAATC+CGG - chr5_2:6446599-6446618 Msa0752700:three_prime_UTR 35.0%
TTTGGATTAAGTATGCACAG+TGG - chr5_2:6446644-6446663 Msa0752700:exon 35.0%
TTGGATTAAGTATGCACAGT+GGG - chr5_2:6446645-6446664 Msa0752700:exon 35.0%
TTAATCATGCGAGGAATGTT+TGG - chr5_2:6446788-6446807 Msa0752700:intron 35.0%
TAATCATGCGAGGAATGTTT+GGG - chr5_2:6446789-6446808 Msa0752700:intron 35.0%
!! TTTTCGAGAGATGGATGAAA+TGG - chr5_2:6446908-6446927 Msa0752700:intron 35.0%
!!! GATTTGTTTTGTGTCATCCT+AGG - chr5_2:6447016-6447035 Msa0752700:CDS 35.0%
TTGAGAAACAGTATGGTGAT+AGG - chr5_2:6447286-6447305 Msa0752700:CDS 35.0%
TGAGAAACAGTATGGTGATA+GGG - chr5_2:6447287-6447306 Msa0752700:CDS 35.0%
TTCAGTATGAAGATGAAGTG+AGG - chr5_2:6447346-6447365 Msa0752700:CDS 35.0%
ATCCGTTGAATTATGATTCG+TGG - chr5_2:6447373-6447392 Msa0752700:CDS 35.0%
! ATAAGATTGGAAGAGAGTGT+CGG - chr5_2:6447405-6447424 Msa0752700:CDS 35.0%
AATGCTTGGAAGTTCACAAA+AGG + chr5_2:6447704-6447723 None:intergenic 35.0%
CTTACAATACAGGAAAAGCA+TGG + chr5_2:6447769-6447788 None:intergenic 35.0%
! GCAAGCTTTTTATACCAATG+AGG - chr5_2:6447860-6447879 Msa0752700:CDS 35.0%
!!! TGTGGGTTTTGATTCATTCA+CGG - chr5_2:6447884-6447903 Msa0752700:CDS 35.0%
TTGATTCATTCACGGTTCTT+AGG - chr5_2:6447892-6447911 Msa0752700:CDS 35.0%
CATATTCTCTAACATCAACC+AGG + chr5_2:6448094-6448113 None:intergenic 35.0%
!! TTTGAGTTTTGCTGTACTTG+TGG - chr5_2:6448387-6448406 Msa0752700:intron 35.0%
! AGGAGTGTGTATATAGGTTT+AGG - chr5_2:6448477-6448496 Msa0752700:intron 35.0%
TGTATATAGGTTTAGGAGTG+TGG - chr5_2:6448484-6448503 Msa0752700:intron 35.0%
!! TGAAAGGTGTCAAATAGAGT+AGG - chr5_2:6448529-6448548 Msa0752700:intron 35.0%
CAGAAGAAAAAGATGTGTAG+TGG - chr5_2:6448673-6448692 Msa0752700:intron 35.0%
CAGTAAACCAGTGTATATAG+TGG - chr5_2:6448745-6448764 Msa0752700:intron 35.0%
GTGGTAAGATACATTTCTTG+TGG - chr5_2:6449004-6449023 Msa0752700:intron 35.0%
TTCCCAAAAAACATAAGTGG+TGG - chr5_2:6449078-6449097 Msa0752700:intron 35.0%
TCCCAAAAAACATAAGTGGT+GGG - chr5_2:6449079-6449098 Msa0752700:intron 35.0%
!!! TCCCACCACTTATGTTTTTT+GGG + chr5_2:6449083-6449102 None:intergenic 35.0%
!!! ATCCCACCACTTATGTTTTT+TGG + chr5_2:6449084-6449103 None:intergenic 35.0%
!!! CTTTATGGTTTTGATGGTAC+TGG - chr5_2:6449183-6449202 Msa0752700:intron 35.0%
CCTTCACCATTTCATTATCT+AGG + chr5_2:6449251-6449270 None:intergenic 35.0%
CCTAGATAATGAAATGGTGA+AGG - chr5_2:6449248-6449267 Msa0752700:intron 35.0%
!! GAAGTTGGGAGTATTTATTG+AGG + chr5_2:6449514-6449533 None:intergenic 35.0%
AATTGTGTGAGAGAGAAGTT+GGG + chr5_2:6449528-6449547 None:intergenic 35.0%
AAATTGTGTGAGAGAGAAGT+TGG + chr5_2:6449529-6449548 None:intergenic 35.0%
!!! ATGAGTGTCGTTTAAGGTTT+TGG + chr5_2:6449653-6449672 None:intergenic 35.0%
AACGACACTCATTATGAAAC+GGG - chr5_2:6449661-6449680 Msa0752700:intron 35.0%
GTCAATCTCTGAATCAAATG+TGG + chr5_2:6449954-6449973 None:intergenic 35.0%
TATATCTTGAATACCCGTGA+TGG + chr5_2:6450017-6450036 None:intergenic 35.0%
TCTTTGCAAATGAGAACTTC+TGG + chr5_2:6450263-6450282 None:intergenic 35.0%
ATTAGGGAATGCTATTGGAA+AGG - chr5_2:6450344-6450363 Msa0752700:intron 35.0%
AGGCATATGTGAAGTTAACT+AGG + chr5_2:6450440-6450459 None:intergenic 35.0%
! TTTGGTGATAGCCTGATATT+TGG + chr5_2:6450734-6450753 None:intergenic 35.0%
!! ATTGGTAATAAGTGCTGAGT+TGG + chr5_2:6450843-6450862 None:intergenic 35.0%
CCATAGGATAGAAATGCTAT+GGG + chr5_2:6450883-6450902 None:intergenic 35.0%
TCCATAGGATAGAAATGCTA+TGG + chr5_2:6450884-6450903 None:intergenic 35.0%
AGAGAAATCACATTAAGGCA+CGG + chr5_2:6450926-6450945 None:intergenic 35.0%
GCATAGATGGTTCATAGATA+TGG + chr5_2:6450979-6450998 None:intergenic 35.0%
TGCTCTATCAAATTCACACT+CGG + chr5_2:6451067-6451086 None:intergenic 35.0%
!!! TTTGTTTTGTGCCTGTTTAG+AGG - chr5_2:6451324-6451343 Msa0752700:CDS 35.0%
! GCCCTTTCTTCTTTTAAATC+TGG + chr5_2:6451388-6451407 None:intergenic 35.0%
ATTAGAGAAATGGCTCAACT+TGG - chr5_2:6451414-6451433 Msa0752700:CDS 35.0%
AGACAAGTTTCTACTGAAGA+TGG - chr5_2:6451508-6451527 Msa0752700:CDS 35.0%
ACTCATTGTTTGTCTTTGAG+TGG - chr5_2:6451551-6451570 Msa0752700:CDS 35.0%
CAGTGACAAAATTGCAAACA+AGG + chr5_2:6451600-6451619 None:intergenic 35.0%
!! ATTTTGTCACTGCTAGTTTC+TGG - chr5_2:6451608-6451627 Msa0752700:CDS 35.0%
! TTTCTGGTATCGTTAGCATT+AGG - chr5_2:6451624-6451643 Msa0752700:CDS 35.0%
ATTGGTTGAATGTGTTTCCT+CGG + chr5_2:6451783-6451802 None:intergenic 35.0%
TTCAACCAATCTCAAGATCA+TGG - chr5_2:6451793-6451812 Msa0752700:CDS 35.0%
TTGCTTCTTCCATTTGTAAG+CGG + chr5_2:6451822-6451841 None:intergenic 35.0%
GATTCCATTCTTGTATAACC+CGG - chr5_2:6451887-6451906 Msa0752700:CDS 35.0%
ACTTAAGCTACAGTATTTGC+CGG + chr5_2:6451909-6451928 None:intergenic 35.0%
CGTCATTAAGGAAATGTGTA+AGG - chr5_2:6452082-6452101 Msa0752700:CDS 35.0%
AAAGAGGAAGAAGACGATAC+AGG + chr5_2:6446316-6446335 None:intergenic 40.0%
CTTCCTCTTTCTCTATCGTT+AGG - chr5_2:6446326-6446345 Msa0752700:three_prime_UTR 40.0%
AACCCTAACGATAGAGAAAG+AGG + chr5_2:6446332-6446351 None:intergenic 40.0%
AAGAAGACATGGCTAAGGTT+TGG + chr5_2:6446357-6446376 None:intergenic 40.0%
TTTGGAAGAAGACATGGCTA+AGG + chr5_2:6446362-6446381 None:intergenic 40.0%
! TGCATCTTTGGAAGAAGACA+TGG + chr5_2:6446368-6446387 None:intergenic 40.0%
!!! CTTTTCGAGTGAGATAACCT+AGG + chr5_2:6446399-6446418 None:intergenic 40.0%
AGCAAATTCTTCGTGAAGCT+AGG - chr5_2:6446491-6446510 Msa0752700:three_prime_UTR 40.0%
GCAAATTCTTCGTGAAGCTA+GGG - chr5_2:6446492-6446511 Msa0752700:three_prime_UTR 40.0%
! TGATTTTCTGTTTCGGAGGA+CGG + chr5_2:6446537-6446556 None:intergenic 40.0%
! CCTCGAATTCCTTTCTTTTC+CGG + chr5_2:6446591-6446610 None:intergenic 40.0%
AGGATTTAATCCGGAGAGTT+CGG - chr5_2:6446608-6446627 Msa0752700:three_prime_UTR 40.0%
ATTCATATGGAGGAGATGCT+TGG - chr5_2:6446862-6446881 Msa0752700:intron 40.0%
! GCGAAGTTTGAGATGAAGAA+TGG - chr5_2:6447060-6447079 Msa0752700:CDS 40.0%
TCATAAACATTCCTCGCCTT+AGG + chr5_2:6447093-6447112 None:intergenic 40.0%
GAGGAATGTTTATGAGAGAG+CGG - chr5_2:6447098-6447117 Msa0752700:CDS 40.0%
TGCACTTGATCATATTCCGA+AGG - chr5_2:6447227-6447246 Msa0752700:intron 40.0%
GCACTTGATCATATTCCGAA+GGG - chr5_2:6447228-6447247 Msa0752700:intron 40.0%
CACTTGATCATATTCCGAAG+GGG - chr5_2:6447229-6447248 Msa0752700:intron 40.0%
TCTCAAATGCCACAAACTTC+CGG + chr5_2:6447272-6447291 None:intergenic 40.0%
GTGGCATTTGAGAAACAGTA+TGG - chr5_2:6447279-6447298 Msa0752700:intron 40.0%
AAACAGTATGGTGATAGGGA+AGG - chr5_2:6447291-6447310 Msa0752700:CDS 40.0%
AACAGTATGGTGATAGGGAA+GGG - chr5_2:6447292-6447311 Msa0752700:CDS 40.0%
GGATTGAGGATGCTATTGTT+GGG - chr5_2:6447313-6447332 Msa0752700:CDS 40.0%
ATGCTATTGTTGGGAAGAGA+AGG - chr5_2:6447322-6447341 Msa0752700:CDS 40.0%
!! TAAGATTGGAAGAGAGTGTC+GGG - chr5_2:6447406-6447425 Msa0752700:CDS 40.0%
TCGGGAATAAGGAAAGAACT+AGG - chr5_2:6447424-6447443 Msa0752700:CDS 40.0%
CGGGAATAAGGAAAGAACTA+GGG - chr5_2:6447425-6447444 Msa0752700:CDS 40.0%
GAATAAGGAAAGAACTAGGG+AGG - chr5_2:6447428-6447447 Msa0752700:CDS 40.0%
GGCAGCGCTATATTTATTTG+TGG - chr5_2:6447502-6447521 Msa0752700:intron 40.0%
ATCAAAACCCACAACCTCAT+TGG + chr5_2:6447877-6447896 None:intergenic 40.0%
!!! GGATACTGTTTTTAGAGCAG+TGG - chr5_2:6447918-6447937 Msa0752700:CDS 40.0%
TCTTGCATCAAACAAAGAGG+AGG + chr5_2:6447955-6447974 None:intergenic 40.0%
AGCTCTTGCATCAAACAAAG+AGG + chr5_2:6447958-6447977 None:intergenic 40.0%
CATCACTAGCACTTCAACTT+TGG + chr5_2:6448225-6448244 None:intergenic 40.0%
AGTGCTAGTGATGTACCTTA+AGG - chr5_2:6448232-6448251 Msa0752700:CDS 40.0%
TGTAAGAACGCTAGACCTTA+AGG + chr5_2:6448250-6448269 None:intergenic 40.0%
CTCTCAGTTTGTGATTCAGT+TGG - chr5_2:6448330-6448349 Msa0752700:intron 40.0%
GAGTGTTCATGTGGAATGAA+AGG - chr5_2:6448513-6448532 Msa0752700:intron 40.0%
TGTCAAATAGAGTAGGAGAC+CGG - chr5_2:6448536-6448555 Msa0752700:intron 40.0%
GTTAAGATAGATGCTCAACG+TGG - chr5_2:6448985-6449004 Msa0752700:intron 40.0%
!! AAATTGGGCTTGGTTTGCAT+TGG - chr5_2:6449134-6449153 Msa0752700:intron 40.0%
CATTCTGAGTGCTTGATATG+TGG - chr5_2:6449297-6449316 Msa0752700:intron 40.0%
!!! GACACTCATTTTGGAACAGA+GGG + chr5_2:6449410-6449429 None:intergenic 40.0%
!!! TGACACTCATTTTGGAACAG+AGG + chr5_2:6449411-6449430 None:intergenic 40.0%
! GGCTAAAGTGACACTCATTT+TGG + chr5_2:6449419-6449438 None:intergenic 40.0%
ACGACACTCATTATGAAACG+GGG - chr5_2:6449662-6449681 Msa0752700:intron 40.0%
TTCGTTGACCATCTATCAAC+AGG - chr5_2:6449756-6449775 Msa0752700:intron 40.0%
! GGTATCAACCTGTTGATAGA+TGG + chr5_2:6449767-6449786 None:intergenic 40.0%
!!! GATTGGAGAGGTTTTAGACT+TGG - chr5_2:6449862-6449881 Msa0752700:intron 40.0%
!!! AGAGGTTTTAGACTTGGACT+AGG - chr5_2:6449868-6449887 Msa0752700:intron 40.0%
CAAGAGCAAAGAAGTTGTAC+AGG + chr5_2:6449922-6449941 None:intergenic 40.0%
CAATAGAACTCAACCAGGAA+AGG + chr5_2:6449994-6450013 None:intergenic 40.0%
GTTGAGTTCTATTGCCATCA+CGG - chr5_2:6450000-6450019 Msa0752700:intron 40.0%
TTGAGTTCTATTGCCATCAC+GGG - chr5_2:6450001-6450020 Msa0752700:intron 40.0%
AGTAAAGATGGCAATAGAGC+TGG + chr5_2:6450137-6450156 None:intergenic 40.0%
CAGCTGACGTATTTCAAACT+GGG + chr5_2:6450301-6450320 None:intergenic 40.0%
TCAGCTGACGTATTTCAAAC+TGG + chr5_2:6450302-6450321 None:intergenic 40.0%
AATACGTCAGCTGAATCTCA+CGG - chr5_2:6450308-6450327 Msa0752700:intron 40.0%
TGGAAAGGCTCCTAAAGATA+AGG - chr5_2:6450359-6450378 Msa0752700:intron 40.0%
ATAGAGATAGAACTGCAGCT+TGG - chr5_2:6450492-6450511 Msa0752700:intron 40.0%
CACCTGAAAATTGCTATGCA+TGG - chr5_2:6450562-6450581 Msa0752700:intron 40.0%
! CTCCATGCATAGCAATTTTC+AGG + chr5_2:6450567-6450586 None:intergenic 40.0%
CTGTACAAGAGCCAAATATC+AGG - chr5_2:6450720-6450739 Msa0752700:intron 40.0%
GAAGGATAGGAAACTAGTAG+AGG + chr5_2:6450782-6450801 None:intergenic 40.0%
AGGATAGAAATGCTATGGGA+GGG + chr5_2:6450879-6450898 None:intergenic 40.0%
TAGGATAGAAATGCTATGGG+AGG + chr5_2:6450880-6450899 None:intergenic 40.0%
CCCATAGCATTTCTATCCTA+TGG - chr5_2:6450880-6450899 Msa0752700:intron 40.0%
GCATCAGAAGATGACAACAA+AGG + chr5_2:6450953-6450972 None:intergenic 40.0%
TATGAACCATCTATGCATGC+TGG - chr5_2:6450983-6451002 Msa0752700:intron 40.0%
TTATGACCAGCATGCATAGA+TGG + chr5_2:6450992-6451011 None:intergenic 40.0%
! TGATCGAACAAAGCACTTGA+AGG - chr5_2:6451110-6451129 Msa0752700:CDS 40.0%
! GAACAAAGCACTTGAAGGTA+TGG - chr5_2:6451115-6451134 Msa0752700:CDS 40.0%
ATCCTCAAACACCTCTAAAC+AGG + chr5_2:6451338-6451357 None:intergenic 40.0%
GGGCAATGCTATTAGAGAAA+TGG - chr5_2:6451404-6451423 Msa0752700:CDS 40.0%
CTTCTCTTCTTGAGCTTCTT+GGG + chr5_2:6451490-6451509 None:intergenic 40.0%
TCTTCTCTTCTTGAGCTTCT+TGG + chr5_2:6451491-6451510 None:intergenic 40.0%
CTACTGAAGATGGTTCTTCT+AGG - chr5_2:6451518-6451537 Msa0752700:CDS 40.0%
TTGTCTTTGAGTGGTTTCCA+AGG - chr5_2:6451560-6451579 Msa0752700:CDS 40.0%
TGTCTTTGAGTGGTTTCCAA+GGG - chr5_2:6451561-6451580 Msa0752700:CDS 40.0%
AGGCCATATAAACTAACCCT+TGG + chr5_2:6451580-6451599 None:intergenic 40.0%
TTGGTTGAATGTGTTTCCTC+GGG + chr5_2:6451782-6451801 None:intergenic 40.0%
TTTGCCGGGTTATACAAGAA+TGG + chr5_2:6451894-6451913 None:intergenic 40.0%
CTTAAGCTACAGTATTTGCC+GGG + chr5_2:6451908-6451927 None:intergenic 40.0%
!! TTGCTGGTTGATTTTGCTGA+AGG - chr5_2:6452184-6452203 Msa0752700:five_prime_UTR 40.0%
GGAAGAAGACGATACAGGAA+AGG + chr5_2:6446311-6446330 None:intergenic 45.0%
GAGTGAGATAACCTAGGGTT+GGG + chr5_2:6446393-6446412 None:intergenic 45.0%
TTCTTAACCCTAGTTGGACG+TGG + chr5_2:6446439-6446458 None:intergenic 45.0%
TGTGATTTGAATTGGAGCGG+GGG + chr5_2:6446467-6446486 None:intergenic 45.0%
CTGTGATTTGAATTGGAGCG+GGG + chr5_2:6446468-6446487 None:intergenic 45.0%
GCTGTGATTTGAATTGGAGC+GGG + chr5_2:6446469-6446488 None:intergenic 45.0%
CGCTGTGATTTGAATTGGAG+CGG + chr5_2:6446470-6446489 None:intergenic 45.0%
CGCTCCAATTCAAATCACAG+CGG - chr5_2:6446468-6446487 Msa0752700:three_prime_UTR 45.0%
TGCTCCGCTGTGATTTGAAT+TGG + chr5_2:6446475-6446494 None:intergenic 45.0%
! TCGGTGATTTTCTGTTTCGG+AGG + chr5_2:6446541-6446560 None:intergenic 45.0%
!! ATCACCGATTCAACCGAACT+CGG - chr5_2:6446553-6446572 Msa0752700:three_prime_UTR 45.0%
GTATCGTCTCCGGAAAAGAA+AGG - chr5_2:6446579-6446598 Msa0752700:three_prime_UTR 45.0%
CCGGAAAAGAAAGGAATTCG+AGG - chr5_2:6446588-6446607 Msa0752700:three_prime_UTR 45.0%
ATTTAATCCGGAGAGTTCGG+TGG - chr5_2:6446611-6446630 Msa0752700:three_prime_UTR 45.0%
TTCGGTGGAATGTCAGTGTT+TGG - chr5_2:6446626-6446645 Msa0752700:three_prime_UTR 45.0%
GAGATGGATGAAATGGATGC+CGG - chr5_2:6446915-6446934 Msa0752700:intron 45.0%
GATAACCATCCTTGCTGATC+CGG + chr5_2:6446937-6446956 None:intergenic 45.0%
! GTTTTGTGTCATCCTAGGGT+TGG - chr5_2:6447021-6447040 Msa0752700:CDS 45.0%
! GTTTGAGATGAAGAATGGCG+AGG - chr5_2:6447065-6447084 Msa0752700:CDS 45.0%
GAATGTTTATGAGAGAGCGG+TGG - chr5_2:6447101-6447120 Msa0752700:CDS 45.0%
! GGAGTTTGAGGAAAGGTGTA+AGG - chr5_2:6447173-6447192 Msa0752700:intron 45.0%
! GTTTGAGGAAAGGTGTAAGG+AGG - chr5_2:6447176-6447195 Msa0752700:intron 45.0%
TTGATCATATTCCGAAGGGG+AGG - chr5_2:6447232-6447251 Msa0752700:intron 45.0%
TGATCATATTCCGAAGGGGA+GGG - chr5_2:6447233-6447252 Msa0752700:intron 45.0%
GGATTTGTACCGGAAGTTTG+TGG - chr5_2:6447260-6447279 Msa0752700:intron 45.0%
GGGATTGAGGATGCTATTGT+TGG - chr5_2:6447312-6447331 Msa0752700:CDS 45.0%
CTCTATGAAGAACTCGATGC+TGG - chr5_2:6447640-6447659 Msa0752700:intron 45.0%
TTCATTCACGGTTCTTAGGC+TGG - chr5_2:6447896-6447915 Msa0752700:CDS 45.0%
TCATTCACGGTTCTTAGGCT+GGG - chr5_2:6447897-6447916 Msa0752700:CDS 45.0%
! AGGTTTAGGAGTGTGGATAC+TGG - chr5_2:6448491-6448510 Msa0752700:intron 45.0%
! TGGATACTGGAGTGTTCATG+TGG - chr5_2:6448504-6448523 Msa0752700:intron 45.0%
GTAAGGCTCTCAACTTAGAG+TGG - chr5_2:6448846-6448865 Msa0752700:intron 45.0%
GGTGGGATTCCATAGTACAT+TGG - chr5_2:6449096-6449115 Msa0752700:intron 45.0%
CGACACTCATTATGAAACGG+GGG - chr5_2:6449663-6449682 Msa0752700:intron 45.0%
GACACTCATTATGAAACGGG+GGG - chr5_2:6449664-6449683 Msa0752700:intron 45.0%
AGATTAGGAGGAGATTGGAG+AGG - chr5_2:6449850-6449869 Msa0752700:intron 45.0%
GATGGCAATAGAACTCAACC+AGG + chr5_2:6449999-6450018 None:intergenic 45.0%
CAATAGAGCTGGACCAGAAA+AGG + chr5_2:6450126-6450145 None:intergenic 45.0%
! AGAACTTCTGGTGAGGTATC+TGG + chr5_2:6450251-6450270 None:intergenic 45.0%
GCAAATGAGAACTTCTGGTG+AGG + chr5_2:6450258-6450277 None:intergenic 45.0%
ATACGTCAGCTGAATCTCAC+GGG - chr5_2:6450309-6450328 Msa0752700:intron 45.0%
ACGGGTGCTCGTCAAATATT+AGG - chr5_2:6450327-6450346 Msa0752700:intron 45.0%
CGGGTGCTCGTCAAATATTA+GGG - chr5_2:6450328-6450347 Msa0752700:intron 45.0%
TGTACCTTCCACAACAACTC+AGG + chr5_2:6450681-6450700 None:intergenic 45.0%
TTAGGCCATGCAGCATTAGT+GGG + chr5_2:6450812-6450831 None:intergenic 45.0%
ATAGAAATGCTATGGGAGGG+GGG + chr5_2:6450876-6450895 None:intergenic 45.0%
GATAGAAATGCTATGGGAGG+GGG + chr5_2:6450877-6450896 None:intergenic 45.0%
GGATAGAAATGCTATGGGAG+GGG + chr5_2:6450878-6450897 None:intergenic 45.0%
!! GAGCAAGAGCGCTTTATGAA+AGG - chr5_2:6451082-6451101 Msa0752700:CDS 45.0%
!! TGCCTGTTTAGAGGTGTTTG+AGG - chr5_2:6451333-6451352 Msa0752700:CDS 45.0%
AGAGAAATGGCTCAACTTGG+AGG - chr5_2:6451417-6451436 Msa0752700:CDS 45.0%
TCAACTTGGAGGCTTCATCT+GGG - chr5_2:6451428-6451447 Msa0752700:CDS 45.0%
GGTATCGTTAGCATTAGGCT+TGG - chr5_2:6451629-6451648 Msa0752700:CDS 45.0%
! TATCGACTATCTATTCCCCG+AGG - chr5_2:6451763-6451782 Msa0752700:CDS 45.0%
TGGTTGAATGTGTTTCCTCG+GGG + chr5_2:6451781-6451800 None:intergenic 45.0%
GGCTTCCATGATCTTGAGAT+TGG + chr5_2:6451801-6451820 None:intergenic 45.0%
TCATGGAAGCCGCTTACAAA+TGG - chr5_2:6451810-6451829 Msa0752700:CDS 45.0%
!! TAAAATTGTTAATATATAAT+AGG - chr5_2:6451020-6451039 Msa0752700:CDS 5.0%
TAGGGTTGGGTCTGCATCTT+TGG + chr5_2:6446380-6446399 None:intergenic 50.0%
AAAGATGCAGACCCAACCCT+AGG - chr5_2:6446379-6446398 Msa0752700:three_prime_UTR 50.0%
CGAGTGAGATAACCTAGGGT+TGG + chr5_2:6446394-6446413 None:intergenic 50.0%
TGGACGTGGAAGCTTGACTT+CGG + chr5_2:6446425-6446444 None:intergenic 50.0%
TCAAGCTTCCACGTCCAACT+AGG - chr5_2:6446428-6446447 Msa0752700:three_prime_UTR 50.0%
CAAGCTTCCACGTCCAACTA+GGG - chr5_2:6446429-6446448 Msa0752700:three_prime_UTR 50.0%
TGACATTCCACCGAACTCTC+CGG + chr5_2:6446621-6446640 None:intergenic 50.0%
! GGATTTTACACGTGCGCGTT+CGG - chr5_2:6446681-6446700 Msa0752700:CDS 50.0%
!! TTCGGTTTGGGAACGAGCAT+TGG - chr5_2:6446699-6446718 Msa0752700:CDS 50.0%
! GAGGAATGTTTGGGATCGTG+CGG - chr5_2:6446798-6446817 Msa0752700:intron 50.0%
AGATGCTTGGCAATGTCGCT+GGG - chr5_2:6446875-6446894 Msa0752700:intron 50.0%
AAATGGATGCCGGATCAGCA+AGG - chr5_2:6446925-6446944 Msa0752700:intron 50.0%
GAAGAATGGCGAGGTTCCTA+AGG - chr5_2:6447074-6447093 Msa0752700:CDS 50.0%
!!! GGAAGCAGAGCTGCTTTTTG+TGG - chr5_2:6447143-6447162 Msa0752700:CDS 50.0%
!!! GCTGCTTTTTGTGGCGTTTG+CGG - chr5_2:6447152-6447171 Msa0752700:intron 50.0%
CGTTTGCGGAGTTTGAGGAA+AGG - chr5_2:6447166-6447185 Msa0752700:intron 50.0%
TGGTGATAGGGAAGGGATTG+AGG - chr5_2:6447299-6447318 Msa0752700:CDS 50.0%
!! GGAAGAGAGTGTCGGGAATA+AGG - chr5_2:6447413-6447432 Msa0752700:CDS 50.0%
AGCTAATGTTCCTCCAGCTG+AGG - chr5_2:6447467-6447486 Msa0752700:intron 50.0%
AGAACTCGATGCTGGAGACA+TGG - chr5_2:6447648-6447667 Msa0752700:intron 50.0%
ATAGAGTAGGAGACCGGTGT+TGG - chr5_2:6448542-6448561 Msa0752700:intron 50.0%
!! TTTGCATTGGCTGGGAGCAT+TGG - chr5_2:6449147-6449166 Msa0752700:intron 50.0%
!! TTGCATTGGCTGGGAGCATT+GGG - chr5_2:6449148-6449167 Msa0752700:intron 50.0%
GTTCTACAGAGAGGGCAACT+AGG + chr5_2:6449335-6449354 None:intergenic 50.0%
GGAGCGAAGTTCTACAGAGA+GGG + chr5_2:6449343-6449362 None:intergenic 50.0%
TGGAGCGAAGTTCTACAGAG+AGG + chr5_2:6449344-6449363 None:intergenic 50.0%
TGCAATTGCCCAACCAGCAT+TGG - chr5_2:6450650-6450669 Msa0752700:intron 50.0%
! AGGCATGTCCAATGCTGGTT+GGG + chr5_2:6450661-6450680 None:intergenic 50.0%
AACTCAGGCATGTCCAATGC+TGG + chr5_2:6450666-6450685 None:intergenic 50.0%
TGGACATGCCTGAGTTGTTG+TGG - chr5_2:6450670-6450689 Msa0752700:intron 50.0%
CATGCCTGAGTTGTTGTGGA+AGG - chr5_2:6450674-6450693 Msa0752700:intron 50.0%
TAGGCCATGCAGCATTAGTG+GGG + chr5_2:6450811-6450830 None:intergenic 50.0%
GTTAGGCCATGCAGCATTAG+TGG + chr5_2:6450813-6450832 None:intergenic 50.0%
! GCTGAGTTGGCAAGTTCGTT+AGG + chr5_2:6450830-6450849 None:intergenic 50.0%
TAGAAATGCTATGGGAGGGG+GGG + chr5_2:6450875-6450894 None:intergenic 50.0%
ACATACTTCTCGCACGCTGA+AGG + chr5_2:6451218-6451237 None:intergenic 50.0%
CTGGAGCTGATGATCTGAAG+TGG + chr5_2:6451369-6451388 None:intergenic 50.0%
CTCAACTTGGAGGCTTCATC+TGG - chr5_2:6451427-6451446 Msa0752700:CDS 50.0%
CAACTTGGAGGCTTCATCTG+GGG - chr5_2:6451429-6451448 Msa0752700:CDS 50.0%
CTCGCCGAGTTCGGTTGAAT+CGG + chr5_2:6446560-6446579 None:intergenic 55.0%
GAGACGATACTCGCCGAGTT+CGG + chr5_2:6446569-6446588 None:intergenic 55.0%
! AACTCGGCGAGTATCGTCTC+CGG - chr5_2:6446569-6446588 Msa0752700:three_prime_UTR 55.0%
ACAGTGGGAAGAGTCGCAGA+AGG - chr5_2:6446660-6446679 Msa0752700:CDS 55.0%
TTACACGTGCGCGTTCGGTT+TGG - chr5_2:6446686-6446705 Msa0752700:CDS 55.0%
TACACGTGCGCGTTCGGTTT+GGG - chr5_2:6446687-6446706 Msa0752700:CDS 55.0%
TACCACAACTGATCCACCCG+CGG + chr5_2:6446835-6446854 None:intergenic 55.0%
GAGATGCTTGGCAATGTCGC+TGG - chr5_2:6446874-6446893 Msa0752700:intron 55.0%
GATGCTTGGCAATGTCGCTG+GGG - chr5_2:6446876-6446895 Msa0752700:intron 55.0%
!! CGAGGCAGGTTTTCGAGAGA+TGG - chr5_2:6446899-6446918 Msa0752700:intron 55.0%
AACGAGATCGAACGAGCGAG+AGG - chr5_2:6446982-6447001 Msa0752700:CDS 55.0%
ACGAGATCGAACGAGCGAGA+GGG - chr5_2:6446983-6447002 Msa0752700:CDS 55.0%
!! GTCATCCTAGGGTTGGTGCT+TGG - chr5_2:6447028-6447047 Msa0752700:CDS 55.0%
CGTATCCAAGCACCAACCCT+AGG + chr5_2:6447036-6447055 None:intergenic 55.0%
! GGAGAAGCTAGCGGATGATG+AGG - chr5_2:6447122-6447141 Msa0752700:CDS 55.0%
TGTGGCGTTTGCGGAGTTTG+AGG - chr5_2:6447161-6447180 Msa0752700:intron 55.0%
AAATCCTCAGCCCTCCCCTT+CGG + chr5_2:6447246-6447265 None:intergenic 55.0%
GGAGGGCTGAGGATTTGTAC+CGG - chr5_2:6447250-6447269 Msa0752700:intron 55.0%
TATCGCTTCTCCTCAGCTGG+AGG + chr5_2:6447480-6447499 None:intergenic 55.0%
CAGTATCGCTTCTCCTCAGC+TGG + chr5_2:6447483-6447502 None:intergenic 55.0%
CAGCTGAGGAGAAGCGATAC+TGG - chr5_2:6447481-6447500 Msa0752700:intron 55.0%
!! TGGGCTTGGTTTGCATTGGC+TGG - chr5_2:6449138-6449157 Msa0752700:intron 55.0%
!! GGGCTTGGTTTGCATTGGCT+GGG - chr5_2:6449139-6449158 Msa0752700:intron 55.0%
CAGGCATGTCCAATGCTGGT+TGG + chr5_2:6450662-6450681 None:intergenic 55.0%
CATGCAGCATTAGTGGGGAG+GGG + chr5_2:6450806-6450825 None:intergenic 55.0%
CCATGCAGCATTAGTGGGGA+GGG + chr5_2:6450807-6450826 None:intergenic 55.0%
GCTTCTTGGGCAGCTTAGAC+TGG + chr5_2:6451477-6451496 None:intergenic 55.0%
GTGCGGTTACTCTCTTGCCG+CGG - chr5_2:6446815-6446834 Msa0752700:intron 60.0%
TGCGGTTACTCTCTTGCCGC+GGG - chr5_2:6446816-6446835 Msa0752700:intron 60.0%
GGATGCCGGATCAGCAAGGA+TGG - chr5_2:6446929-6446948 Msa0752700:intron 60.0%
ATGGCGAGGTTCCTAAGGCG+AGG - chr5_2:6447079-6447098 Msa0752700:CDS 60.0%
GAGAGCGGTGGAGAAGCTAG+CGG - chr5_2:6447113-6447132 Msa0752700:CDS 60.0%
GTAAGGAGGCAGAGCGTGCT+AGG - chr5_2:6447190-6447209 Msa0752700:intron 60.0%
TATTCCGAAGGGGAGGGCTG+AGG - chr5_2:6447239-6447258 Msa0752700:intron 60.0%
AGTGGGGAGGGGTGAAGGAT+AGG + chr5_2:6450795-6450814 None:intergenic 60.0%
GCATTAGTGGGGAGGGGTGA+AGG + chr5_2:6450800-6450819 None:intergenic 60.0%
CCCTCCCCACTAATGCTGCA+TGG - chr5_2:6450804-6450823 Msa0752700:intron 60.0%
GCCATGCAGCATTAGTGGGG+AGG + chr5_2:6450808-6450827 None:intergenic 60.0%
AATGCTATGGGAGGGGGGGT+GGG + chr5_2:6450871-6450890 None:intergenic 60.0%
AAATGCTATGGGAGGGGGGG+TGG + chr5_2:6450872-6450891 None:intergenic 60.0%
GAGGCTTCATCTGGGGAGCT+AGG - chr5_2:6451436-6451455 Msa0752700:CDS 60.0%
GGTTACTCTCTTGCCGCGGG+TGG - chr5_2:6446819-6446838 Msa0752700:intron 65.0%
TGCCGCGGGTGGATCAGTTG+TGG - chr5_2:6446830-6446849 Msa0752700:intron 65.0%
TTGGCAATGTCGCTGGGGCG+AGG - chr5_2:6446881-6446900 Msa0752700:intron 65.0%
GAGGGGGGGTGGGAGTGAAT+TGG + chr5_2:6450861-6450880 None:intergenic 65.0%
CAATGTCGCTGGGGCGAGGC+AGG - chr5_2:6446885-6446904 Msa0752700:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 6446299 6452215 6446299 ID=Msa0752700;Name=Msa0752700
chr5_2 mRNA 6446299 6452215 6446299 ID=Msa0752700-mRNA-1;Parent=Msa0752700;Name=Msa0752700-mRNA-1;_AED=0.05;_eAED=0.05;_QI=68|1|1|1|1|1|7|350|695
chr5_2 exon 6446299 6446763 6446299 ID=Msa0752700-mRNA-1:exon:2731;Parent=Msa0752700-mRNA-1
chr5_2 exon 6446975 6447170 6446975 ID=Msa0752700-mRNA-1:exon:2730;Parent=Msa0752700-mRNA-1
chr5_2 exon 6447283 6447472 6447283 ID=Msa0752700-mRNA-1:exon:2729;Parent=Msa0752700-mRNA-1
chr5_2 exon 6447819 6448037 6447819 ID=Msa0752700-mRNA-1:exon:2728;Parent=Msa0752700-mRNA-1
chr5_2 exon 6448134 6448278 6448134 ID=Msa0752700-mRNA-1:exon:2727;Parent=Msa0752700-mRNA-1
chr5_2 exon 6450822 6450887 6450822 ID=Msa0752700-mRNA-1:exon:2726;Parent=Msa0752700-mRNA-1
chr5_2 exon 6450991 6452215 6450991 ID=Msa0752700-mRNA-1:exon:2725;Parent=Msa0752700-mRNA-1
chr5_2 five_prime_UTR 6452148 6452215 6452148 ID=Msa0752700-mRNA-1:five_prime_utr;Parent=Msa0752700-mRNA-1
chr5_2 CDS 6450991 6452147 6450991 ID=Msa0752700-mRNA-1:cds;Parent=Msa0752700-mRNA-1
chr5_2 CDS 6450822 6450887 6450822 ID=Msa0752700-mRNA-1:cds;Parent=Msa0752700-mRNA-1
chr5_2 CDS 6448134 6448278 6448134 ID=Msa0752700-mRNA-1:cds;Parent=Msa0752700-mRNA-1
chr5_2 CDS 6447819 6448037 6447819 ID=Msa0752700-mRNA-1:cds;Parent=Msa0752700-mRNA-1
chr5_2 CDS 6447283 6447472 6447283 ID=Msa0752700-mRNA-1:cds;Parent=Msa0752700-mRNA-1
chr5_2 CDS 6446975 6447170 6446975 ID=Msa0752700-mRNA-1:cds;Parent=Msa0752700-mRNA-1
chr5_2 CDS 6446649 6446763 6446649 ID=Msa0752700-mRNA-1:cds;Parent=Msa0752700-mRNA-1
chr5_2 three_prime_UTR 6446299 6446648 6446299 ID=Msa0752700-mRNA-1:three_prime_utr;Parent=Msa0752700-mRNA-1
Gene Sequence

>Msa0752700

ATGTCTTCTTCCAAAGATGCAGACCCAACCCTAGGTTATCTCACTCGAAAAGACACCGAAGTCAAGCTTCCACGTCCAACTAGGGTTAAGAACAAAACCCCCGCTCCAATTCAAATCACAGCGGAGCAAATTCTTCGTGAAGCTAGGGAGCGTCAAGAAGCTGAGATCCGTCCTCCGAAACAGAAAATCACCGATTCAACCGAACTCGGCGAGTATCGTCTCCGGAAAAGAAAGGAATTCGAGGATTTAATCCGGAGAGTTCGGTGGAATGTCAGTGTTTGGATTAAGTATGCACAGTGGGAAGAGTCGCAGAAGGATTTTACACGTGCGCGTTCGGTTTGGGAACGAGCATTGGAAGTTGATTATAAGAATCATACTCTGTGGTTGAAGTATGCTGAAGTTGAGATGAAGAATAAGTTTATTAATCATGCGAGGAATGTTTGGGATCGTGCGGTTACTCTCTTGCCGCGGGTGGATCAGTTGTGGTATAAGTATATTCATATGGAGGAGATGCTTGGCAATGTCGCTGGGGCGAGGCAGGTTTTCGAGAGATGGATGAAATGGATGCCGGATCAGCAAGGATGGTTATCTTATATAAAATTTGAGCTGAGATATAACGAGATCGAACGAGCGAGAGGGATTTTCGAGAGATTTGTTTTGTGTCATCCTAGGGTTGGTGCTTGGATACGCTATGCGAAGTTTGAGATGAAGAATGGCGAGGTTCCTAAGGCGAGGAATGTTTATGAGAGAGCGGTGGAGAAGCTAGCGGATGATGAGGAAGCAGAGCTGCTTTTTGTGGCGTTTGCGGAGTTTGAGGAAAGGTGTAAGGAGGCAGAGCGTGCTAGGTGTATTTATAAATTTGCACTTGATCATATTCCGAAGGGGAGGGCTGAGGATTTGTACCGGAAGTTTGTGGCATTTGAGAAACAGTATGGTGATAGGGAAGGGATTGAGGATGCTATTGTTGGGAAGAGAAGGTTTCAGTATGAAGATGAAGTGAGGAAAAATCCGTTGAATTATGATTCGTGGTTTGATTATATAAGATTGGAAGAGAGTGTCGGGAATAAGGAAAGAACTAGGGAGGTTTATGAGAGAGCTATAGCTAATGTTCCTCCAGCTGAGGAGAAGCGATACTGGCAGCGCTATATTTATTTGTGGATTAATTATGCACTCTATGAAGAACTCGATGCTGGAGACATGGAGCGAACAAGAGATGTGTACAAGGAGTGTCTCAACCAGATACCTCACCAGAAGTTCTCATTTGCAAAGATATGGCTTCTAGCAGCCCAGTTTGAAATACGTCAGCTGAATCTCACGGGTGCTCGTCAAATATTAGGGAATGCTATTGGAAAGGCTCCTAAAGATAAGATATTTAAGAAGTATATAGAGATAGAACTGCAGCTTGGTAATATAGATCGATGCAGAAAACTATATGAAAAGTATTTGGAGTGGTCACCTGAAAATTGCTATGCATGGAGCAAGTATGCAGAACTAGAGAGATCTTTAGCTGAGACTGAACGAGCTAGAGCAATATTTGAGCTTGCAATTGCCCAACCAGCATTGGACATGCCTGAGTTGTTGTGGAAGGCATACATTGATTTTGAAACTGCCGAGTGTGAATTTGATAGAGCAAGAGCGCTTTATGAAAGGCTTCTTGATCGAACAAAGCACTTGAAGGTATGGCAGAGCTATGCAGAGTTTGAAGCAACAGCTATAGATGAGAGTTTAGAATTATCGGAACAAGAACAAAAGGCGCAGTGCCTTCAGCGTGCGAGAAAGGTGTTTGAGGATGCTCTAAACCACTTCAGATCATCAGCTCCAGATTTAAAAGAAGAAAGGGCAATGCTATTAGAGAAATGGCTCAACTTGGAGGCTTCATCTGGGGAGCTAGGTGATGTCAGCTTAGTCCAGTCTAAGCTGCCCAAGAAGCTCAAGAAGAGAAGACAAGTTTCTACTGAAGATGGTTCTTCTAGAATGGAAGAATTTATCGACTATCTATTCCCCGAGGAAACACATTCAACCAATCTCAAGATCATGGAAGCCGCTTACAAATGGAAGAAGCAAAAATTGTCTAATGCTGATGAATAA

Protein sequence

>Msa0752700

MSSSKDADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFTRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMKWMPDQQGWLSYIKFELRYNEIERARGIFERFVLCHPRVGAWIRYAKFEMKNGEVPKARNVYERAVEKLADDEEAELLFVAFAEFEERCKEAERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERTREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYKECLNQIPHQKFSFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLAETERARAIFELAIAQPALDMPELLWKAYIDFETAECEFDRARALYERLLDRTKHLKVWQSYAEFEATAIDESLELSEQEQKAQCLQRARKVFEDALNHFRSSAPDLKEERAMLLEKWLNLEASSGELGDVSLVQSKLPKKLKKRRQVSTEDGSSRMEEFIDYLFPEETHSTNLKIMEAAYKWKKQKLSNADE*