Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006000 | Msa0970420 | 0.821300 | 4.343992e-53 | -8.615850e-47 |
| Msa0006070 | Msa0970420 | 0.800572 | 1.353340e-48 | -8.615850e-47 |
| Msa0012080 | Msa0970420 | 0.802412 | 5.680324e-49 | -8.615850e-47 |
| Msa0013050 | Msa0970420 | -0.821285 | 4.378801e-53 | -8.615850e-47 |
| Msa0014710 | Msa0970420 | 0.801011 | 1.100889e-48 | -8.615850e-47 |
| Msa0016670 | Msa0970420 | 0.809017 | 2.328677e-50 | -8.615850e-47 |
| Msa0018620 | Msa0970420 | 0.808816 | 2.572176e-50 | -8.615850e-47 |
| Msa0025730 | Msa0970420 | 0.813800 | 2.130335e-51 | -8.615850e-47 |
| Msa0027260 | Msa0970420 | 0.813122 | 3.003023e-51 | -8.615850e-47 |
| Msa0030380 | Msa0970420 | 0.808569 | 2.903536e-50 | -8.615850e-47 |
| Msa0032090 | Msa0970420 | 0.817523 | 3.154644e-52 | -8.615850e-47 |
| Msa0032260 | Msa0970420 | 0.808311 | 3.296470e-50 | -8.615850e-47 |
| Msa0032580 | Msa0970420 | 0.844782 | 6.106341e-59 | -8.615850e-47 |
| Msa0032610 | Msa0970420 | 0.803058 | 4.177595e-49 | -8.615850e-47 |
| Msa0037540 | Msa0970420 | -0.801458 | 8.921318e-49 | -8.615850e-47 |
| Msa0040690 | Msa0970420 | 0.840866 | 6.718787e-58 | -8.615850e-47 |
| Msa0044540 | Msa0970420 | -0.812374 | 4.377357e-51 | -8.615850e-47 |
| Msa0047160 | Msa0970420 | 0.802467 | 5.533051e-49 | -8.615850e-47 |
| Msa0052610 | Msa0970420 | 0.806478 | 8.068924e-50 | -8.615850e-47 |
| Msa0067870 | Msa0970420 | 0.800512 | 1.391858e-48 | -8.615850e-47 |
| Msa0067940 | Msa0970420 | 0.812802 | 3.528802e-51 | -8.615850e-47 |
| Msa0067990 | Msa0970420 | 0.801132 | 1.040266e-48 | -8.615850e-47 |
| Msa0074240 | Msa0970420 | 0.804704 | 1.901449e-49 | -8.615850e-47 |
| Msa0079380 | Msa0970420 | 0.802510 | 5.421126e-49 | -8.615850e-47 |
| Msa0080200 | Msa0970420 | 0.811091 | 8.325517e-51 | -8.615850e-47 |
| Msa0081360 | Msa0970420 | 0.823194 | 1.579393e-53 | -8.615850e-47 |
| Msa0081480 | Msa0970420 | 0.821361 | 4.205871e-53 | -8.615850e-47 |
| Msa0081930 | Msa0970420 | 0.806615 | 7.548779e-50 | -8.615850e-47 |
| Msa0085360 | Msa0970420 | -0.813804 | 2.126517e-51 | -8.615850e-47 |
| Msa0091250 | Msa0970420 | -0.815795 | 7.696805e-52 | -8.615850e-47 |
| Msa0094470 | Msa0970420 | 0.804897 | 1.732565e-49 | -8.615850e-47 |
| Msa0095380 | Msa0970420 | 0.807719 | 4.405188e-50 | -8.615850e-47 |
| Msa0100000 | Msa0970420 | 0.812677 | 3.758654e-51 | -8.615850e-47 |
| Msa0106670 | Msa0970420 | 0.807651 | 4.554700e-50 | -8.615850e-47 |
| Msa0115270 | Msa0970420 | 0.804933 | 1.702533e-49 | -8.615850e-47 |
| Msa0607340 | Msa0970420 | -0.801003 | 1.104977e-48 | -8.615850e-47 |
| Msa0610430 | Msa0970420 | 0.800178 | 1.628281e-48 | -8.615850e-47 |
| Msa0615440 | Msa0970420 | 0.810466 | 1.136803e-50 | -8.615850e-47 |
| Msa0616240 | Msa0970420 | 0.814667 | 1.370756e-51 | -8.615850e-47 |
| Msa0619070 | Msa0970420 | 0.815442 | 9.223596e-52 | -8.615850e-47 |
| Msa0619470 | Msa0970420 | 0.801440 | 8.993627e-49 | -8.615850e-47 |
| Msa0620620 | Msa0970420 | 0.806371 | 8.497601e-50 | -8.615850e-47 |
| Msa0621490 | Msa0970420 | 0.816132 | 6.472965e-52 | -8.615850e-47 |
| Msa0623080 | Msa0970420 | 0.817766 | 2.781777e-52 | -8.615850e-47 |
| Msa0623700 | Msa0970420 | 0.826072 | 3.314520e-54 | -8.615850e-47 |
| Msa0625070 | Msa0970420 | 0.821967 | 3.045720e-53 | -8.615850e-47 |
| Msa0626910 | Msa0970420 | 0.800110 | 1.680511e-48 | -8.615850e-47 |
| Msa0633400 | Msa0970420 | 0.801186 | 1.014046e-48 | -8.615850e-47 |
| Msa0638070 | Msa0970420 | 0.819280 | 1.262025e-52 | -8.615850e-47 |
| Msa0638280 | Msa0970420 | 0.810316 | 1.224918e-50 | -8.615850e-47 |
| Msa0638320 | Msa0970420 | 0.817521 | 3.159187e-52 | -8.615850e-47 |
| Msa0641670 | Msa0970420 | 0.803146 | 4.006038e-49 | -8.615850e-47 |
| Msa0644660 | Msa0970420 | 0.819196 | 1.318317e-52 | -8.615850e-47 |
| Msa0647450 | Msa0970420 | -0.808527 | 2.964485e-50 | -8.615850e-47 |
| Msa0654870 | Msa0970420 | 0.805018 | 1.634701e-49 | -8.615850e-47 |
| Msa0656530 | Msa0970420 | 0.807218 | 5.626543e-50 | -8.615850e-47 |
| Msa0661190 | Msa0970420 | -0.834244 | 3.353470e-56 | -8.615850e-47 |
| Msa0669850 | Msa0970420 | 0.828435 | 9.007319e-55 | -8.615850e-47 |
| Msa0677270 | Msa0970420 | 0.815223 | 1.032239e-51 | -8.615850e-47 |
| Msa0677290 | Msa0970420 | 0.821080 | 4.882965e-53 | -8.615850e-47 |
| Msa0679290 | Msa0970420 | -0.812384 | 4.357120e-51 | -8.615850e-47 |
| Msa0679700 | Msa0970420 | 0.802133 | 6.481998e-49 | -8.615850e-47 |
| Msa0680240 | Msa0970420 | 0.800849 | 1.187989e-48 | -8.615850e-47 |
| Msa0682900 | Msa0970420 | 0.814278 | 1.671037e-51 | -8.615850e-47 |
| Msa0684500 | Msa0970420 | 0.807200 | 5.678382e-50 | -8.615850e-47 |
| Msa0689010 | Msa0970420 | 0.813387 | 2.627059e-51 | -8.615850e-47 |
| Msa0691900 | Msa0970420 | 0.819597 | 1.068584e-52 | -8.615850e-47 |
| Msa0692080 | Msa0970420 | 0.814155 | 1.778966e-51 | -8.615850e-47 |
| Msa0698060 | Msa0970420 | 0.801261 | 9.786187e-49 | -8.615850e-47 |
| Msa0698490 | Msa0970420 | 0.812498 | 4.113193e-51 | -8.615850e-47 |
| Msa0698660 | Msa0970420 | 0.815219 | 1.034257e-51 | -8.615850e-47 |
| Msa0699570 | Msa0970420 | 0.819160 | 1.344032e-52 | -8.615850e-47 |
| Msa0703230 | Msa0970420 | 0.836612 | 8.451906e-57 | -8.615850e-47 |
| Msa0708520 | Msa0970420 | 0.814029 | 1.896610e-51 | -8.615850e-47 |
| Msa0709500 | Msa0970420 | 0.813660 | 2.287052e-51 | -8.615850e-47 |
| Msa0715700 | Msa0970420 | 0.807007 | 6.238165e-50 | -8.615850e-47 |
| Msa0716840 | Msa0970420 | 0.814897 | 1.218904e-51 | -8.615850e-47 |
| Msa0722960 | Msa0970420 | 0.817780 | 2.760851e-52 | -8.615850e-47 |
| Msa0729710 | Msa0970420 | 0.800134 | 1.662026e-48 | -8.615850e-47 |
| Msa0738100 | Msa0970420 | 0.800992 | 1.111154e-48 | -8.615850e-47 |
| Msa0743680 | Msa0970420 | 0.805070 | 1.593852e-49 | -8.615850e-47 |
| Msa0743720 | Msa0970420 | 0.811671 | 6.231904e-51 | -8.615850e-47 |
| Msa0745790 | Msa0970420 | 0.804886 | 1.741740e-49 | -8.615850e-47 |
| Msa0750880 | Msa0970420 | 0.811086 | 8.347756e-51 | -8.615850e-47 |
| Msa0750920 | Msa0970420 | 0.813974 | 1.950946e-51 | -8.615850e-47 |
| Msa0754720 | Msa0970420 | -0.814790 | 1.287784e-51 | -8.615850e-47 |
| Msa0756630 | Msa0970420 | -0.830354 | 3.078663e-55 | -8.615850e-47 |
| Msa0763830 | Msa0970420 | 0.811023 | 8.614062e-51 | -8.615850e-47 |
| Msa0770200 | Msa0970420 | 0.807941 | 3.952314e-50 | -8.615850e-47 |
| Msa0784380 | Msa0970420 | 0.834531 | 2.839899e-56 | -8.615850e-47 |
| Msa0790660 | Msa0970420 | -0.813534 | 2.438158e-51 | -8.615850e-47 |
| Msa0790850 | Msa0970420 | 0.816727 | 4.763775e-52 | -8.615850e-47 |
| Msa0791820 | Msa0970420 | 0.811600 | 6.456795e-51 | -8.615850e-47 |
| Msa0793800 | Msa0970420 | 0.808956 | 2.399793e-50 | -8.615850e-47 |
| Msa0795090 | Msa0970420 | 0.824167 | 9.345869e-54 | -8.615850e-47 |
| Msa0796530 | Msa0970420 | 0.812849 | 3.446981e-51 | -8.615850e-47 |
| Msa0802410 | Msa0970420 | 0.808994 | 2.355739e-50 | -8.615850e-47 |
| Msa0808080 | Msa0970420 | 0.805882 | 1.077075e-49 | -8.615850e-47 |
| Msa0808270 | Msa0970420 | 0.816761 | 4.681014e-52 | -8.615850e-47 |
| Msa0812570 | Msa0970420 | 0.831314 | 1.790720e-55 | -8.615850e-47 |
| Msa0813720 | Msa0970420 | 0.841941 | 3.500786e-58 | -8.615850e-47 |
| Msa0813740 | Msa0970420 | 0.839681 | 1.370451e-57 | -8.615850e-47 |
| Msa0826760 | Msa0970420 | 0.816413 | 5.602872e-52 | -8.615850e-47 |
| Msa0827040 | Msa0970420 | 0.813269 | 2.787625e-51 | -8.615850e-47 |
| Msa0831580 | Msa0970420 | 0.834624 | 2.691141e-56 | -8.615850e-47 |
| Msa0831870 | Msa0970420 | 0.805908 | 1.063722e-49 | -8.615850e-47 |
| Msa0123100 | Msa0970420 | 0.815980 | 7.001654e-52 | -8.615850e-47 |
| Msa0127310 | Msa0970420 | 0.803395 | 3.558784e-49 | -8.615850e-47 |
| Msa0128860 | Msa0970420 | 0.801755 | 7.753706e-49 | -8.615850e-47 |
| Msa0129190 | Msa0970420 | -0.814213 | 1.727352e-51 | -8.615850e-47 |
| Msa0135380 | Msa0970420 | 0.839061 | 1.984209e-57 | -8.615850e-47 |
| Msa0136070 | Msa0970420 | 0.837435 | 5.205559e-57 | -8.615850e-47 |
| Msa0136100 | Msa0970420 | 0.829382 | 5.311101e-55 | -8.615850e-47 |
| Msa0142660 | Msa0970420 | 0.826470 | 2.665934e-54 | -8.615850e-47 |
| Msa0148120 | Msa0970420 | 0.813116 | 3.012634e-51 | -8.615850e-47 |
| Msa0156650 | Msa0970420 | -0.817574 | 3.073716e-52 | -8.615850e-47 |
| Msa0160550 | Msa0970420 | 0.823412 | 1.404634e-53 | -8.615850e-47 |
| Msa0162770 | Msa0970420 | -0.812405 | 4.311212e-51 | -8.615850e-47 |
| Msa0165220 | Msa0970420 | 0.815065 | 1.118997e-51 | -8.615850e-47 |
| Msa0165660 | Msa0970420 | 0.807692 | 4.464903e-50 | -8.615850e-47 |
| Msa0166560 | Msa0970420 | 0.800911 | 1.153966e-48 | -8.615850e-47 |
| Msa0167480 | Msa0970420 | 0.802513 | 5.413513e-49 | -8.615850e-47 |
| Msa0169140 | Msa0970420 | -0.831960 | 1.241155e-55 | -8.615850e-47 |
| Msa0172780 | Msa0970420 | 0.811418 | 7.070351e-51 | -8.615850e-47 |
| Msa0172970 | Msa0970420 | 0.848018 | 8.006161e-60 | -8.615850e-47 |
| Msa0173740 | Msa0970420 | 0.818499 | 1.898929e-52 | -8.615850e-47 |
| Msa0173820 | Msa0970420 | 0.809310 | 2.015818e-50 | -8.615850e-47 |
| Msa0173990 | Msa0970420 | 0.810494 | 1.120903e-50 | -8.615850e-47 |
| Msa0174730 | Msa0970420 | 0.802915 | 4.473302e-49 | -8.615850e-47 |
| Msa0177700 | Msa0970420 | -0.807000 | 6.257918e-50 | -8.615850e-47 |
| Msa0182680 | Msa0970420 | 0.802033 | 6.795560e-49 | -8.615850e-47 |
| Msa0186890 | Msa0970420 | 0.835589 | 1.536385e-56 | -8.615850e-47 |
| Msa0187070 | Msa0970420 | 0.811157 | 8.055420e-51 | -8.615850e-47 |
| Msa0187120 | Msa0970420 | 0.800645 | 1.307805e-48 | -8.615850e-47 |
| Msa0187930 | Msa0970420 | 0.807621 | 4.622629e-50 | -8.615850e-47 |
| Msa0189300 | Msa0970420 | 0.801245 | 9.860185e-49 | -8.615850e-47 |
| Msa0192510 | Msa0970420 | 0.809414 | 1.915046e-50 | -8.615850e-47 |
| Msa0193120 | Msa0970420 | 0.828020 | 1.133591e-54 | -8.615850e-47 |
| Msa0194540 | Msa0970420 | 0.814796 | 1.283508e-51 | -8.615850e-47 |
| Msa0195460 | Msa0970420 | 0.830510 | 2.820656e-55 | -8.615850e-47 |
| Msa0197520 | Msa0970420 | 0.811693 | 6.162624e-51 | -8.615850e-47 |
| Msa0197660 | Msa0970420 | 0.832537 | 8.935412e-56 | -8.615850e-47 |
| Msa0208220 | Msa0970420 | 0.807038 | 6.144993e-50 | -8.615850e-47 |
| Msa0220720 | Msa0970420 | 0.820166 | 7.919119e-53 | -8.615850e-47 |
| Msa0225740 | Msa0970420 | 0.804714 | 1.892305e-49 | -8.615850e-47 |
| Msa0226470 | Msa0970420 | 0.806167 | 9.382436e-50 | -8.615850e-47 |
| Msa0227400 | Msa0970420 | 0.832752 | 7.899655e-56 | -8.615850e-47 |
| Msa0228070 | Msa0970420 | 0.809655 | 1.699421e-50 | -8.615850e-47 |
| Msa0231660 | Msa0970420 | 0.803837 | 2.880944e-49 | -8.615850e-47 |
| Msa0231880 | Msa0970420 | 0.847984 | 8.182330e-60 | -8.615850e-47 |
| Msa0237260 | Msa0970420 | 0.828850 | 7.146485e-55 | -8.615850e-47 |
| Msa0369050 | Msa0970420 | 0.837014 | 6.671542e-57 | -8.615850e-47 |
| Msa0369220 | Msa0970420 | 0.805764 | 1.140187e-49 | -8.615850e-47 |
| Msa0372340 | Msa0970420 | 0.824584 | 7.458131e-54 | -8.615850e-47 |
| Msa0383500 | Msa0970420 | 0.805683 | 1.185798e-49 | -8.615850e-47 |
| Msa0385580 | Msa0970420 | 0.813798 | 2.132280e-51 | -8.615850e-47 |
| Msa0386920 | Msa0970420 | 0.825679 | 4.110197e-54 | -8.615850e-47 |
| Msa0398950 | Msa0970420 | 0.814371 | 1.594344e-51 | -8.615850e-47 |
| Msa0402330 | Msa0970420 | 0.813897 | 2.028038e-51 | -8.615850e-47 |
| Msa0414950 | Msa0970420 | -0.813523 | 2.451194e-51 | -8.615850e-47 |
| Msa0415130 | Msa0970420 | 0.805298 | 1.428152e-49 | -8.615850e-47 |
| Msa0416300 | Msa0970420 | 0.801348 | 9.393243e-49 | -8.615850e-47 |
| Msa0419820 | Msa0970420 | 0.814397 | 1.572972e-51 | -8.615850e-47 |
| Msa0421780 | Msa0970420 | -0.824321 | 8.601682e-54 | -8.615850e-47 |
| Msa0424920 | Msa0970420 | 0.807994 | 3.850955e-50 | -8.615850e-47 |
| Msa0432770 | Msa0970420 | 0.812770 | 3.586268e-51 | -8.615850e-47 |
| Msa0438200 | Msa0970420 | 0.809662 | 1.694051e-50 | -8.615850e-47 |
| Msa0467640 | Msa0970420 | -0.804832 | 1.787273e-49 | -8.615850e-47 |
| Msa0467900 | Msa0970420 | -0.818437 | 1.961200e-52 | -8.615850e-47 |
| Msa0467960 | Msa0970420 | -0.809771 | 1.604890e-50 | -8.615850e-47 |
| Msa0469910 | Msa0970420 | -0.807987 | 3.863393e-50 | -8.615850e-47 |
| Msa0478840 | Msa0970420 | -0.804989 | 1.657499e-49 | -8.615850e-47 |
| Msa0239800 | Msa0970420 | 0.828029 | 1.127807e-54 | -8.615850e-47 |
| Msa0241640 | Msa0970420 | 0.828224 | 1.012701e-54 | -8.615850e-47 |
| Msa0262310 | Msa0970420 | 0.855203 | 7.386821e-62 | -8.615850e-47 |
| Msa0265520 | Msa0970420 | 0.808991 | 2.359772e-50 | -8.615850e-47 |
| Msa0268130 | Msa0970420 | 0.809881 | 1.519945e-50 | -8.615850e-47 |
| Msa0272480 | Msa0970420 | -0.802238 | 6.167972e-49 | -8.615850e-47 |
| Msa0272530 | Msa0970420 | 0.803604 | 3.220758e-49 | -8.615850e-47 |
| Msa0275000 | Msa0970420 | 0.826404 | 2.763868e-54 | -8.615850e-47 |
| Msa0279790 | Msa0970420 | 0.856419 | 3.259496e-62 | -8.615850e-47 |
| Msa0289250 | Msa0970420 | 0.806441 | 8.212759e-50 | -8.615850e-47 |
| Msa0294560 | Msa0970420 | -0.822663 | 2.099568e-53 | -8.615850e-47 |
| Msa0298700 | Msa0970420 | 0.817002 | 4.132628e-52 | -8.615850e-47 |
| Msa0298990 | Msa0970420 | 0.802305 | 5.974177e-49 | -8.615850e-47 |
| Msa0299870 | Msa0970420 | 0.836833 | 7.420140e-57 | -8.615850e-47 |
| Msa0306710 | Msa0970420 | 0.804196 | 2.425974e-49 | -8.615850e-47 |
| Msa0317510 | Msa0970420 | 0.823426 | 1.393891e-53 | -8.615850e-47 |
| Msa0320100 | Msa0970420 | 0.826184 | 3.117554e-54 | -8.615850e-47 |
| Msa0321310 | Msa0970420 | 0.820846 | 5.526924e-53 | -8.615850e-47 |
| Msa0333030 | Msa0970420 | 0.817758 | 2.793302e-52 | -8.615850e-47 |
| Msa0334350 | Msa0970420 | 0.801099 | 1.056551e-48 | -8.615850e-47 |
| Msa0336040 | Msa0970420 | -0.800531 | 1.379728e-48 | -8.615850e-47 |
| Msa0336420 | Msa0970420 | 0.804432 | 2.165888e-49 | -8.615850e-47 |
| Msa0337240 | Msa0970420 | 0.812076 | 5.086294e-51 | -8.615850e-47 |
| Msa0337620 | Msa0970420 | 0.844951 | 5.498773e-59 | -8.615850e-47 |
| Msa0337650 | Msa0970420 | 0.839942 | 1.171677e-57 | -8.615850e-47 |
| Msa0347360 | Msa0970420 | 0.804819 | 1.798703e-49 | -8.615850e-47 |
| Msa0347680 | Msa0970420 | 0.813153 | 2.955972e-51 | -8.615850e-47 |
| Msa0350990 | Msa0970420 | 0.821266 | 4.424772e-53 | -8.615850e-47 |
| Msa0351030 | Msa0970420 | 0.821754 | 3.412149e-53 | -8.615850e-47 |
| Msa0351080 | Msa0970420 | 0.837345 | 5.489408e-57 | -8.615850e-47 |
| Msa0355270 | Msa0970420 | 0.811245 | 7.709665e-51 | -8.615850e-47 |
| Msa0358170 | Msa0970420 | 0.807699 | 4.448943e-50 | -8.615850e-47 |
| Msa0360990 | Msa0970420 | 0.804519 | 2.077828e-49 | -8.615850e-47 |
| Msa0490750 | Msa0970420 | 0.802796 | 4.733609e-49 | -8.615850e-47 |
| Msa0508590 | Msa0970420 | 0.811088 | 8.336797e-51 | -8.615850e-47 |
| Msa0508630 | Msa0970420 | 0.802680 | 5.000389e-49 | -8.615850e-47 |
| Msa0508870 | Msa0970420 | 0.806299 | 8.801425e-50 | -8.615850e-47 |
| Msa0509390 | Msa0970420 | 0.820461 | 6.777015e-53 | -8.615850e-47 |
| Msa0511310 | Msa0970420 | 0.839910 | 1.194513e-57 | -8.615850e-47 |
| Msa0519000 | Msa0970420 | 0.801864 | 7.361411e-49 | -8.615850e-47 |
| Msa0521880 | Msa0970420 | 0.810015 | 1.421972e-50 | -8.615850e-47 |
| Msa0525340 | Msa0970420 | 0.812624 | 3.859673e-51 | -8.615850e-47 |
| Msa0526540 | Msa0970420 | 0.813111 | 3.019039e-51 | -8.615850e-47 |
| Msa0526890 | Msa0970420 | 0.807204 | 5.665530e-50 | -8.615850e-47 |
| Msa0529680 | Msa0970420 | 0.810919 | 9.071566e-51 | -8.615850e-47 |
| Msa0535030 | Msa0970420 | 0.814512 | 1.483659e-51 | -8.615850e-47 |
| Msa0535060 | Msa0970420 | 0.813850 | 2.077555e-51 | -8.615850e-47 |
| Msa0541860 | Msa0970420 | 0.835969 | 1.231060e-56 | -8.615850e-47 |
| Msa0542160 | Msa0970420 | 0.814738 | 1.322047e-51 | -8.615850e-47 |
| Msa0546360 | Msa0970420 | 0.823791 | 1.145235e-53 | -8.615850e-47 |
| Msa0547140 | Msa0970420 | 0.809912 | 1.496184e-50 | -8.615850e-47 |
| Msa0547320 | Msa0970420 | 0.812599 | 3.908592e-51 | -8.615850e-47 |
| Msa0547360 | Msa0970420 | 0.812065 | 5.114080e-51 | -8.615850e-47 |
| Msa0553220 | Msa0970420 | -0.820850 | 5.517016e-53 | -8.615850e-47 |
| Msa0561430 | Msa0970420 | 0.806592 | 7.631261e-50 | -8.615850e-47 |
| Msa0562440 | Msa0970420 | 0.813999 | 1.925653e-51 | -8.615850e-47 |
| Msa0565960 | Msa0970420 | 0.813867 | 2.059265e-51 | -8.615850e-47 |
| Msa0568820 | Msa0970420 | 0.816668 | 4.911731e-52 | -8.615850e-47 |
| Msa0576940 | Msa0970420 | 0.810332 | 1.215246e-50 | -8.615850e-47 |
| Msa0579290 | Msa0970420 | 0.813896 | 2.029565e-51 | -8.615850e-47 |
| Msa0579390 | Msa0970420 | 0.813564 | 2.401308e-51 | -8.615850e-47 |
| Msa0591060 | Msa0970420 | 0.812799 | 3.534271e-51 | -8.615850e-47 |
| Msa0591770 | Msa0970420 | 0.829570 | 4.781056e-55 | -8.615850e-47 |
| Msa0592440 | Msa0970420 | 0.801480 | 8.827272e-49 | -8.615850e-47 |
| Msa0593650 | Msa0970420 | 0.803446 | 3.472866e-49 | -8.615850e-47 |
| Msa0601850 | Msa0970420 | 0.805391 | 1.365660e-49 | -8.615850e-47 |
| Msa0845750 | Msa0970420 | 0.800203 | 1.609154e-48 | -8.615850e-47 |
| Msa0850960 | Msa0970420 | 0.855403 | 6.457506e-62 | -8.615850e-47 |
| Msa0863870 | Msa0970420 | 0.805404 | 1.357043e-49 | -8.615850e-47 |
| Msa0865890 | Msa0970420 | 0.800776 | 1.229871e-48 | -8.615850e-47 |
| Msa0871270 | Msa0970420 | 0.813408 | 2.599139e-51 | -8.615850e-47 |
| Msa0874500 | Msa0970420 | 0.812112 | 4.995371e-51 | -8.615850e-47 |
| Msa0876200 | Msa0970420 | 0.835009 | 2.153488e-56 | -8.615850e-47 |
| Msa0885880 | Msa0970420 | 0.808978 | 2.374142e-50 | -8.615850e-47 |
| Msa0900110 | Msa0970420 | 0.802956 | 4.386041e-49 | -8.615850e-47 |
| Msa0902760 | Msa0970420 | 0.811922 | 5.495237e-51 | -8.615850e-47 |
| Msa0909000 | Msa0970420 | -0.815420 | 9.329450e-52 | -8.615850e-47 |
| Msa0936300 | Msa0970420 | 0.804909 | 1.722409e-49 | -8.615850e-47 |
| Msa0938220 | Msa0970420 | 0.823705 | 1.199636e-53 | -8.615850e-47 |
| Msa0944190 | Msa0970420 | 0.800563 | 1.358814e-48 | -8.615850e-47 |
| Msa0959360 | Msa0970420 | 0.811483 | 6.843980e-51 | -8.615850e-47 |
| Msa0968590 | Msa0970420 | 0.800702 | 1.273212e-48 | -8.615850e-47 |
| Msa0969810 | Msa0970420 | 0.803110 | 4.076654e-49 | -8.615850e-47 |
| Msa0970420 | Msa0993600 | 0.800804 | 1.213540e-48 | -8.615850e-47 |
| Msa0970420 | Msa0996170 | 0.809568 | 1.774746e-50 | -8.615850e-47 |
| Msa0970420 | Msa0999970 | 0.813815 | 2.114603e-51 | -8.615850e-47 |
| Msa0970420 | Msa1003030 | 0.815565 | 8.663417e-52 | -8.615850e-47 |
| Msa0970420 | Msa1006840 | 0.817223 | 3.685505e-52 | -8.615850e-47 |
| Msa0970420 | Msa1012830 | 0.802314 | 5.949625e-49 | -8.615850e-47 |
| Msa0970420 | Msa1013400 | 0.812810 | 3.515191e-51 | -8.615850e-47 |
| Msa0970420 | Msa1014540 | 0.810382 | 1.184901e-50 | -8.615850e-47 |
| Msa0970420 | Msa1019640 | 0.826525 | 2.586627e-54 | -8.615850e-47 |
| Msa0970420 | Msa1031470 | -0.810334 | 1.213658e-50 | -8.615850e-47 |
| Msa0970420 | Msa1037420 | 0.802986 | 4.324536e-49 | -8.615850e-47 |
| Msa0970420 | Msa1039140 | 0.802614 | 5.161614e-49 | -8.615850e-47 |
| Msa0970420 | Msa1040890 | 0.810035 | 1.407690e-50 | -8.615850e-47 |
| Msa0970420 | Msa1046020 | 0.802476 | 5.509036e-49 | -8.615850e-47 |
| Msa0970420 | Msa1046060 | 0.814591 | 1.425154e-51 | -8.615850e-47 |
| Msa0970420 | Msa1046300 | 0.806535 | 7.849142e-50 | -8.615850e-47 |
| Msa0970420 | Msa1050200 | 0.807243 | 5.560687e-50 | -8.615850e-47 |
| Msa0970420 | Msa1051200 | 0.804470 | 2.127181e-49 | -8.615850e-47 |
| Msa0970420 | Msa1054240 | 0.803653 | 3.145218e-49 | -8.615850e-47 |
| Msa0970420 | Msa1066490 | 0.815466 | 9.110691e-52 | -8.615850e-47 |
| Msa0970420 | Msa1077030 | 0.809264 | 2.061592e-50 | -8.615850e-47 |
| Msa0970420 | Msa1079370 | -0.807257 | 5.521874e-50 | -8.615850e-47 |
| Msa0970420 | Msa1081150 | 0.809480 | 1.853574e-50 | -8.615850e-47 |
| Msa0970420 | Msa1082500 | 0.807999 | 3.841099e-50 | -8.615850e-47 |
| Msa0970420 | Msa1082700 | 0.807027 | 6.178171e-50 | -8.615850e-47 |
| Msa0970420 | Msa1083210 | 0.809121 | 2.213119e-50 | -8.615850e-47 |
| Msa0970420 | Msa1084470 | 0.836116 | 1.130135e-56 | -8.615850e-47 |
| Msa0970420 | Msa1087710 | 0.825543 | 4.425878e-54 | -8.615850e-47 |
| Msa0970420 | Msa1093530 | 0.809660 | 1.695243e-50 | -8.615850e-47 |
| Msa0970420 | Msa1094420 | 0.800154 | 1.646563e-48 | -8.615850e-47 |
| Msa0970420 | Msa1104140 | 0.822151 | 2.760936e-53 | -8.615850e-47 |
| Msa0970420 | Msa1104210 | 0.809211 | 2.116137e-50 | -8.615850e-47 |
| Msa0970420 | Msa1104370 | 0.831218 | 1.890571e-55 | -8.615850e-47 |
| Msa0970420 | Msa1125760 | 0.802185 | 6.324698e-49 | -8.615850e-47 |
| Msa0970420 | Msa1126120 | -0.809688 | 1.672143e-50 | -8.615850e-47 |
| Msa0970420 | Msa1127830 | 0.827124 | 1.860214e-54 | -8.615850e-47 |
| Msa0970420 | Msa1135890 | 0.803756 | 2.995210e-49 | -8.615850e-47 |
| Msa0970420 | Msa1139810 | 0.810654 | 1.035350e-50 | -8.615850e-47 |
| Msa0970420 | Msa1147900 | 0.805324 | 1.410553e-49 | -8.615850e-47 |
| Msa0970420 | Msa1154280 | 0.800233 | 1.586306e-48 | -8.615850e-47 |
| Msa0970420 | Msa1166010 | 0.812428 | 4.260136e-51 | -8.615850e-47 |
| Msa0970420 | Msa1166870 | 0.802334 | 5.894189e-49 | -8.615850e-47 |
| Msa0970420 | Msa1171360 | 0.812944 | 3.285017e-51 | -8.615850e-47 |
| Msa0970420 | Msa1181550 | 0.833655 | 4.706845e-56 | -8.615850e-47 |
| Msa0970420 | Msa1181860 | 0.807115 | 5.918266e-50 | -8.615850e-47 |
| Msa0970420 | Msa1186950 | -0.821208 | 4.563123e-53 | -8.615850e-47 |
| Msa0970420 | Msa1187840 | 0.806133 | 9.536996e-50 | -8.615850e-47 |
| Msa0970420 | Msa1199220 | 0.804402 | 2.198158e-49 | -8.615850e-47 |
| Msa0970420 | Msa1208890 | -0.841350 | 5.012209e-58 | -8.615850e-47 |
| Msa0970420 | Msa1217860 | 0.821606 | 3.691534e-53 | -8.615850e-47 |
| Msa0970420 | Msa1218600 | 0.802002 | 6.896062e-49 | -8.615850e-47 |
| Msa0970420 | Msa1233890 | 0.806494 | 8.006191e-50 | -8.615850e-47 |
| Msa0970420 | Msa1235740 | 0.802066 | 6.692880e-49 | -8.615850e-47 |
| Msa0970420 | Msa1237940 | 0.822034 | 2.939598e-53 | -8.615850e-47 |
| Msa0970420 | Msa1238930 | 0.828507 | 8.649631e-55 | -8.615850e-47 |
| Msa0970420 | Msa1245940 | -0.844576 | 6.940286e-59 | -8.615850e-47 |
| Msa0970420 | Msa1254610 | 0.811192 | 7.916582e-51 | -8.615850e-47 |
| Msa0970420 | Msa1259070 | -0.847203 | 1.341362e-59 | -8.615850e-47 |
| Msa0970420 | Msa1264020 | 0.814695 | 1.351806e-51 | -8.615850e-47 |
| Msa0970420 | Msa1265630 | 0.800037 | 1.739277e-48 | -8.615850e-47 |
| Msa0970420 | Msa1269580 | -0.801279 | 9.707085e-49 | -8.615850e-47 |
| Msa0970420 | Msa1271210 | 0.822612 | 2.157768e-53 | -8.615850e-47 |
| Msa0970420 | Msa1274280 | 0.800574 | 1.351884e-48 | -8.615850e-47 |
| Msa0970420 | Msa1287460 | 0.803759 | 2.991081e-49 | -8.615850e-47 |
| Msa0970420 | Msa1291350 | 0.803869 | 2.837246e-49 | -8.615850e-47 |
| Msa0970420 | Msa1294610 | -0.801962 | 7.030510e-49 | -8.615850e-47 |
| Msa0970420 | Msa1299180 | -0.803094 | 4.107931e-49 | -8.615850e-47 |
| Msa0970420 | Msa1302850 | 0.804533 | 2.064318e-49 | -8.615850e-47 |
| Msa0970420 | Msa1316780 | 0.807957 | 3.920634e-50 | -8.615850e-47 |
| Msa0970420 | Msa1316830 | 0.816897 | 4.364234e-52 | -8.615850e-47 |
| Msa0970420 | Msa1332040 | -0.815135 | 1.079793e-51 | -8.615850e-47 |
| Msa0970420 | Msa1344340 | 0.804681 | 1.922206e-49 | -8.615850e-47 |
| Msa0970420 | Msa1346370 | 0.801717 | 7.893123e-49 | -8.615850e-47 |
| Msa0970420 | Msa1348490 | 0.814272 | 1.676608e-51 | -8.615850e-47 |
| Msa0970420 | Msa1353060 | 0.812794 | 3.543166e-51 | -8.615850e-47 |
| Msa0970420 | Msa1363330 | 0.813472 | 2.515736e-51 | -8.615850e-47 |
| Msa0970420 | Msa1365600 | 0.810483 | 1.127330e-50 | -8.615850e-47 |
| Msa0970420 | Msa1371430 | 0.811877 | 5.620492e-51 | -8.615850e-47 |
| Msa0970420 | Msa1379500 | 0.849206 | 3.751829e-60 | -8.615850e-47 |
| Msa0970420 | Msa1379760 | 0.805298 | 1.427959e-49 | -8.615850e-47 |
| Msa0970420 | Msa1385100 | 0.815244 | 1.021172e-51 | -8.615850e-47 |
| Msa0970420 | Msa1385460 | 0.807191 | 5.702017e-50 | -8.615850e-47 |
| Msa0970420 | Msa1386600 | 0.814436 | 1.542495e-51 | -8.615850e-47 |
| Msa0970420 | Msa1394290 | 0.805955 | 1.039834e-49 | -8.615850e-47 |
| Msa0970420 | Msa1394730 | 0.813166 | 2.937737e-51 | -8.615850e-47 |
| Msa0970420 | Msa1397810 | 0.826124 | 3.222666e-54 | -8.615850e-47 |
| Msa0970420 | Msa1400610 | -0.844809 | 6.006387e-59 | -8.615850e-47 |
| Msa0970420 | Msa1403580 | -0.803629 | 3.181648e-49 | -8.615850e-47 |
| Msa0970420 | Msa1403930 | -0.819749 | 9.861541e-53 | -8.615850e-47 |
| Msa0970420 | Msa1408010 | 0.804069 | 2.578250e-49 | -8.615850e-47 |
| Msa0970420 | Msa1410100 | 0.817664 | 2.931997e-52 | -8.615850e-47 |
| Msa0970420 | Msa1416150 | 0.808247 | 3.401043e-50 | -8.615850e-47 |
| Msa0970420 | Msa1419800 | -0.802941 | 4.417623e-49 | -8.615850e-47 |
| Msa0970420 | Msa1420990 | 0.814890 | 1.223680e-51 | -8.615850e-47 |
| Msa0970420 | Msa1423350 | 0.810928 | 9.032101e-51 | -8.615850e-47 |
| Msa0970420 | Msa1424750 | 0.815556 | 8.703596e-52 | -8.615850e-47 |
| Msa0970420 | Msa1426030 | 0.802106 | 6.564813e-49 | -8.615850e-47 |
| Msa0970420 | Msa1439960 | 0.826711 | 2.335338e-54 | -8.615850e-47 |
| Msa0970420 | Msa1440000 | 0.802992 | 4.311596e-49 | -8.615850e-47 |
| Msa0970420 | Msa1442700 | 0.810388 | 1.181905e-50 | -8.615850e-47 |
| Msa0970420 | Msa1444310 | 0.843973 | 1.007573e-58 | -8.615850e-47 |
| Msa0970420 | Msa1457920 | 0.807367 | 5.232066e-50 | -8.615850e-47 |
| Msa0970420 | Msa1461300 | 0.807404 | 5.138000e-50 | -8.615850e-47 |
| Msa0970420 | Msa1461490 | 0.819955 | 8.847313e-53 | -8.615850e-47 |
| Msa0970420 | Msa1464830 | 0.830186 | 3.383767e-55 | -8.615850e-47 |
| Msa0970420 | Msa1466300 | 0.835184 | 1.945484e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 31 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAGAAACGTGAAGGCTTT+TGG | 0.238701 | 6_4:+1928041 | Msa0970420:CDS |
| TGGAAAATCCATCCAAGTTT+TGG | 0.260624 | 6_4:+1927999 | Msa0970420:CDS |
| AAGTTTGCCTAGAGCTATAT+TGG | 0.282716 | 6_4:-1928520 | None:intergenic |
| TTGAGAATACGGTTAAATTC+TGG | 0.315463 | 6_4:+1927979 | Msa0970420:CDS |
| ACTGAAGCGGTTTCCATCAT+TGG | 0.326540 | 6_4:+1927948 | Msa0970420:CDS |
| GGTCGAAAACATGGTTGAAA+TGG | 0.329615 | 6_4:-1927310 | None:intergenic |
| CGTCTGGCCTACTGCCTAAA+TGG | 0.359726 | 6_4:+1928071 | Msa0970420:CDS |
| GAAATCTCCAAAATGACAAT+AGG | 0.421681 | 6_4:+1928477 | Msa0970420:three_prime_UTR |
| AAATATCCGTCACCAAAACT+TGG | 0.426178 | 6_4:-1928011 | None:intergenic |
| GAAAGCAGATGAATCAAAGA+AGG | 0.451708 | 6_4:+1928208 | Msa0970420:CDS |
| CTCAACTTTACATCCAATGA+TGG | 0.454499 | 6_4:-1927961 | None:intergenic |
| TGGATGTAAAGTTGAGAATA+CGG | 0.468666 | 6_4:+1927968 | Msa0970420:CDS |
| AAAATGACAATAGGTTGAAA+AGG | 0.473813 | 6_4:+1928486 | Msa0970420:three_prime_UTR |
| GTCGAAAACATGGTTGAAAT+GGG | 0.474047 | 6_4:-1927309 | None:intergenic |
| GGAAGAGCAATAAGAAATGA+AGG | 0.476217 | 6_4:+1928258 | Msa0970420:CDS |
| TTCTTCTCCTCCTTCGTCTG+AGG | 0.523655 | 6_4:-1927267 | None:intergenic |
| TTAATTTATGATCGAAGAAG+TGG | 0.529345 | 6_4:+1928283 | Msa0970420:three_prime_UTR |
| TTATTCACCATTTAGGCAGT+AGG | 0.530913 | 6_4:-1928078 | None:intergenic |
| ATCCGTCACCAAAACTTGGA+TGG | 0.541453 | 6_4:-1928007 | None:intergenic |
| GAAAATAGTTAGAAACGTGA+AGG | 0.545491 | 6_4:+1928034 | Msa0970420:CDS |
| AAAATGCAAAGAAAGGCAAA+GGG | 0.545842 | 6_4:+1928237 | Msa0970420:CDS |
| TGTGTGTCCAATATAGCTCT+AGG | 0.553306 | 6_4:+1928513 | Msa0970420:three_prime_UTR |
| ATTTATGATCGAAGAAGTGG+AGG | 0.572124 | 6_4:+1928286 | Msa0970420:three_prime_UTR |
| ATGATGGAAACCGCTTCAGT+TGG | 0.593183 | 6_4:-1927945 | None:intergenic |
| GAATTCATAGCCAACTGAAG+CGG | 0.600365 | 6_4:+1927935 | Msa0970420:intron |
| ATGGTATGCACCTCAGACGA+AGG | 0.604607 | 6_4:+1927257 | Msa0970420:CDS |
| AAAGCAGATGAATCAAAGAA+GGG | 0.629387 | 6_4:+1928209 | Msa0970420:CDS |
| GCAAACTTAGAAATTACAAG+AGG | 0.646201 | 6_4:+1928535 | Msa0970420:three_prime_UTR |
| TTTATGATCGAAGAAGTGGA+GGG | 0.648481 | 6_4:+1928287 | Msa0970420:three_prime_UTR |
| GCAGATGAATCAAAGAAGGG+AGG | 0.649662 | 6_4:+1928212 | Msa0970420:CDS |
| GTATGCACCTCAGACGAAGG+AGG | 0.677821 | 6_4:+1927260 | Msa0970420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTTTGTAATATTTTTAT+TGG | - | chr6_4:1927467-1927486 | None:intergenic | 10.0% |
| !!! | ATTATTATGAATTTTATTTC+CGG | + | chr6_4:1928327-1928346 | Msa0970420:three_prime_UTR | 10.0% |
| !!! | TTCTTTTGTAATATTTTTAT+TGG | - | chr6_4:1927467-1927486 | None:intergenic | 10.0% |
| !!! | ATTATTATGAATTTTATTTC+CGG | + | chr6_4:1928327-1928346 | Msa0970420:three_prime_UTR | 10.0% |
| !! | ATATTTAATCAAGGAAATTA+CGG | - | chr6_4:1927334-1927353 | None:intergenic | 15.0% |
| !! | TAATTTCCTTGATTAAATAT+AGG | + | chr6_4:1927334-1927353 | Msa0970420:intron | 15.0% |
| !! | ATATTTAATCAAGGAAATTA+CGG | - | chr6_4:1927334-1927353 | None:intergenic | 15.0% |
| !! | TAATTTCCTTGATTAAATAT+AGG | + | chr6_4:1927334-1927353 | Msa0970420:intron | 15.0% |
| !! | TTGTTACCTATATTTAATCA+AGG | - | chr6_4:1927343-1927362 | None:intergenic | 20.0% |
| !! | CAAATAGGTAAAAGAAAAAA+GGG | - | chr6_4:1927522-1927541 | None:intergenic | 20.0% |
| !! | ACAAATAGGTAAAAGAAAAA+AGG | - | chr6_4:1927523-1927542 | None:intergenic | 20.0% |
| !! | TGATTATTTACCTAAACTAA+GGG | - | chr6_4:1927599-1927618 | None:intergenic | 20.0% |
| !! | ATGATTATTTACCTAAACTA+AGG | - | chr6_4:1927600-1927619 | None:intergenic | 20.0% |
| !! | TGTTACTCTAGATATAAATT+AGG | + | chr6_4:1927730-1927749 | Msa0970420:intron | 20.0% |
| !! | GTTACTCTAGATATAAATTA+GGG | + | chr6_4:1927731-1927750 | Msa0970420:intron | 20.0% |
| !! | TCAAAAACATAACTATCAAA+CGG | - | chr6_4:1927905-1927924 | None:intergenic | 20.0% |
| !!! | ATAACTTTTATTCACCATTT+AGG | - | chr6_4:1928088-1928107 | None:intergenic | 20.0% |
| !! | TTGTTACCTATATTTAATCA+AGG | - | chr6_4:1927343-1927362 | None:intergenic | 20.0% |
| !! | CAAATAGGTAAAAGAAAAAA+GGG | - | chr6_4:1927522-1927541 | None:intergenic | 20.0% |
| !! | ACAAATAGGTAAAAGAAAAA+AGG | - | chr6_4:1927523-1927542 | None:intergenic | 20.0% |
| !! | TGATTATTTACCTAAACTAA+GGG | - | chr6_4:1927599-1927618 | None:intergenic | 20.0% |
| !! | ATGATTATTTACCTAAACTA+AGG | - | chr6_4:1927600-1927619 | None:intergenic | 20.0% |
| !! | TGTTACTCTAGATATAAATT+AGG | + | chr6_4:1927730-1927749 | Msa0970420:intron | 20.0% |
| !! | GTTACTCTAGATATAAATTA+GGG | + | chr6_4:1927731-1927750 | Msa0970420:intron | 20.0% |
| !! | TCAAAAACATAACTATCAAA+CGG | - | chr6_4:1927905-1927924 | None:intergenic | 20.0% |
| !!! | ATAACTTTTATTCACCATTT+AGG | - | chr6_4:1928088-1928107 | None:intergenic | 20.0% |
| ! | TAAATCAACCAACATGTATT+AGG | - | chr6_4:1928151-1928170 | None:intergenic | 25.0% |
| ! | TTAATTTATGATCGAAGAAG+TGG | + | chr6_4:1928283-1928302 | Msa0970420:three_prime_UTR | 25.0% |
| ! | GTAAAAAGTAAATAATGCAC+AGG | + | chr6_4:1928398-1928417 | Msa0970420:three_prime_UTR | 25.0% |
| !!! | TTTTCAACCTATTGTCATTT+TGG | - | chr6_4:1928487-1928506 | None:intergenic | 25.0% |
| !! | AAAATGACAATAGGTTGAAA+AGG | + | chr6_4:1928486-1928505 | Msa0970420:three_prime_UTR | 25.0% |
| ! | TAAATCAACCAACATGTATT+AGG | - | chr6_4:1928151-1928170 | None:intergenic | 25.0% |
| ! | TTAATTTATGATCGAAGAAG+TGG | + | chr6_4:1928283-1928302 | Msa0970420:three_prime_UTR | 25.0% |
| ! | GTAAAAAGTAAATAATGCAC+AGG | + | chr6_4:1928398-1928417 | Msa0970420:three_prime_UTR | 25.0% |
| !!! | TTTTCAACCTATTGTCATTT+TGG | - | chr6_4:1928487-1928506 | None:intergenic | 25.0% |
| !! | AAAATGACAATAGGTTGAAA+AGG | + | chr6_4:1928486-1928505 | Msa0970420:three_prime_UTR | 25.0% |
| ATCAAACTAATCAAGAAGCT+TGG | - | chr6_4:1927381-1927400 | None:intergenic | 30.0% | |
| TAGGTAAAAGAAAAAAGGGA+AGG | - | chr6_4:1927518-1927537 | None:intergenic | 30.0% | |
| TTACCTATTTGTAATCACAG+TGG | + | chr6_4:1927531-1927550 | Msa0970420:intron | 30.0% | |
| TTACCACTGTGATTACAAAT+AGG | - | chr6_4:1927537-1927556 | None:intergenic | 30.0% | |
| ! | TAACTTTTACAAAATCACCC+TGG | + | chr6_4:1927569-1927588 | Msa0970420:intron | 30.0% |
| TGGATGTAAAGTTGAGAATA+CGG | + | chr6_4:1927968-1927987 | Msa0970420:CDS | 30.0% | |
| TTGAGAATACGGTTAAATTC+TGG | + | chr6_4:1927979-1927998 | Msa0970420:CDS | 30.0% | |
| GAAAATAGTTAGAAACGTGA+AGG | + | chr6_4:1928034-1928053 | Msa0970420:CDS | 30.0% | |
| TGTTTCAACCTAATACATGT+TGG | + | chr6_4:1928140-1928159 | Msa0970420:intron | 30.0% | |
| ! | ATACATGTTGGTTGATTTAC+AGG | + | chr6_4:1928152-1928171 | Msa0970420:intron | 30.0% |
| ! | TACATGTTGGTTGATTTACA+GGG | + | chr6_4:1928153-1928172 | Msa0970420:intron | 30.0% |
| ! | AACACGTATTGTATTTTGCA+AGG | + | chr6_4:1928178-1928197 | Msa0970420:CDS | 30.0% |
| ! | ACACGTATTGTATTTTGCAA+GGG | + | chr6_4:1928179-1928198 | Msa0970420:CDS | 30.0% |
| AAAGCAGATGAATCAAAGAA+GGG | + | chr6_4:1928209-1928228 | Msa0970420:CDS | 30.0% | |
| AAAAATGCAAAGAAAGGCAA+AGG | + | chr6_4:1928236-1928255 | Msa0970420:CDS | 30.0% | |
| AAAATGCAAAGAAAGGCAAA+GGG | + | chr6_4:1928237-1928256 | Msa0970420:CDS | 30.0% | |
| !!! | GTGTAGACCTCTTTTTTATA+TGG | - | chr6_4:1928356-1928375 | None:intergenic | 30.0% |
| GAAATCTCCAAAATGACAAT+AGG | + | chr6_4:1928477-1928496 | Msa0970420:three_prime_UTR | 30.0% | |
| GCAAACTTAGAAATTACAAG+AGG | + | chr6_4:1928535-1928554 | Msa0970420:three_prime_UTR | 30.0% | |
| ATCAAACTAATCAAGAAGCT+TGG | - | chr6_4:1927381-1927400 | None:intergenic | 30.0% | |
| TAGGTAAAAGAAAAAAGGGA+AGG | - | chr6_4:1927518-1927537 | None:intergenic | 30.0% | |
| TTACCTATTTGTAATCACAG+TGG | + | chr6_4:1927531-1927550 | Msa0970420:intron | 30.0% | |
| TTACCACTGTGATTACAAAT+AGG | - | chr6_4:1927537-1927556 | None:intergenic | 30.0% | |
| ! | TAACTTTTACAAAATCACCC+TGG | + | chr6_4:1927569-1927588 | Msa0970420:intron | 30.0% |
| TGGATGTAAAGTTGAGAATA+CGG | + | chr6_4:1927968-1927987 | Msa0970420:CDS | 30.0% | |
| TTGAGAATACGGTTAAATTC+TGG | + | chr6_4:1927979-1927998 | Msa0970420:CDS | 30.0% | |
| GAAAATAGTTAGAAACGTGA+AGG | + | chr6_4:1928034-1928053 | Msa0970420:CDS | 30.0% | |
| TGTTTCAACCTAATACATGT+TGG | + | chr6_4:1928140-1928159 | Msa0970420:intron | 30.0% | |
| ! | ATACATGTTGGTTGATTTAC+AGG | + | chr6_4:1928152-1928171 | Msa0970420:intron | 30.0% |
| ! | TACATGTTGGTTGATTTACA+GGG | + | chr6_4:1928153-1928172 | Msa0970420:intron | 30.0% |
| ! | AACACGTATTGTATTTTGCA+AGG | + | chr6_4:1928178-1928197 | Msa0970420:CDS | 30.0% |
| ! | ACACGTATTGTATTTTGCAA+GGG | + | chr6_4:1928179-1928198 | Msa0970420:CDS | 30.0% |
| AAAGCAGATGAATCAAAGAA+GGG | + | chr6_4:1928209-1928228 | Msa0970420:CDS | 30.0% | |
| AAAAATGCAAAGAAAGGCAA+AGG | + | chr6_4:1928236-1928255 | Msa0970420:CDS | 30.0% | |
| AAAATGCAAAGAAAGGCAAA+GGG | + | chr6_4:1928237-1928256 | Msa0970420:CDS | 30.0% | |
| !!! | GTGTAGACCTCTTTTTTATA+TGG | - | chr6_4:1928356-1928375 | None:intergenic | 30.0% |
| GAAATCTCCAAAATGACAAT+AGG | + | chr6_4:1928477-1928496 | Msa0970420:three_prime_UTR | 30.0% | |
| GCAAACTTAGAAATTACAAG+AGG | + | chr6_4:1928535-1928554 | Msa0970420:three_prime_UTR | 30.0% | |
| GTCGAAAACATGGTTGAAAT+GGG | - | chr6_4:1927312-1927331 | None:intergenic | 35.0% | |
| GCGTTGTGGAGAAATAAAAT+TGG | + | chr6_4:1927658-1927677 | Msa0970420:intron | 35.0% | |
| CTCAACTTTACATCCAATGA+TGG | - | chr6_4:1927964-1927983 | None:intergenic | 35.0% | |
| ! | TGGAAAATCCATCCAAGTTT+TGG | + | chr6_4:1927999-1928018 | Msa0970420:CDS | 35.0% |
| AAATATCCGTCACCAAAACT+TGG | - | chr6_4:1928014-1928033 | None:intergenic | 35.0% | |
| ! | TTAGAAACGTGAAGGCTTTT+GGG | + | chr6_4:1928042-1928061 | Msa0970420:CDS | 35.0% |
| TTATTCACCATTTAGGCAGT+AGG | - | chr6_4:1928081-1928100 | None:intergenic | 35.0% | |
| GAAAGCAGATGAATCAAAGA+AGG | + | chr6_4:1928208-1928227 | Msa0970420:CDS | 35.0% | |
| GGAGGAAAAAATGCAAAGAA+AGG | + | chr6_4:1928230-1928249 | Msa0970420:CDS | 35.0% | |
| GGAAGAGCAATAAGAAATGA+AGG | + | chr6_4:1928258-1928277 | Msa0970420:CDS | 35.0% | |
| ATTTATGATCGAAGAAGTGG+AGG | + | chr6_4:1928286-1928305 | Msa0970420:three_prime_UTR | 35.0% | |
| TTTATGATCGAAGAAGTGGA+GGG | + | chr6_4:1928287-1928306 | Msa0970420:three_prime_UTR | 35.0% | |
| !!! | CCTCTTTTTTATATGGACAC+CGG | - | chr6_4:1928349-1928368 | None:intergenic | 35.0% |
| AAGTTTGCCTAGAGCTATAT+TGG | - | chr6_4:1928523-1928542 | None:intergenic | 35.0% | |
| GTCGAAAACATGGTTGAAAT+GGG | - | chr6_4:1927312-1927331 | None:intergenic | 35.0% | |
| GCGTTGTGGAGAAATAAAAT+TGG | + | chr6_4:1927658-1927677 | Msa0970420:intron | 35.0% | |
| CTCAACTTTACATCCAATGA+TGG | - | chr6_4:1927964-1927983 | None:intergenic | 35.0% | |
| ! | TGGAAAATCCATCCAAGTTT+TGG | + | chr6_4:1927999-1928018 | Msa0970420:CDS | 35.0% |
| AAATATCCGTCACCAAAACT+TGG | - | chr6_4:1928014-1928033 | None:intergenic | 35.0% | |
| ! | TTAGAAACGTGAAGGCTTTT+GGG | + | chr6_4:1928042-1928061 | Msa0970420:CDS | 35.0% |
| TTATTCACCATTTAGGCAGT+AGG | - | chr6_4:1928081-1928100 | None:intergenic | 35.0% | |
| GAAAGCAGATGAATCAAAGA+AGG | + | chr6_4:1928208-1928227 | Msa0970420:CDS | 35.0% | |
| GGAGGAAAAAATGCAAAGAA+AGG | + | chr6_4:1928230-1928249 | Msa0970420:CDS | 35.0% | |
| GGAAGAGCAATAAGAAATGA+AGG | + | chr6_4:1928258-1928277 | Msa0970420:CDS | 35.0% | |
| ATTTATGATCGAAGAAGTGG+AGG | + | chr6_4:1928286-1928305 | Msa0970420:three_prime_UTR | 35.0% | |
| TTTATGATCGAAGAAGTGGA+GGG | + | chr6_4:1928287-1928306 | Msa0970420:three_prime_UTR | 35.0% | |
| !!! | CCTCTTTTTTATATGGACAC+CGG | - | chr6_4:1928349-1928368 | None:intergenic | 35.0% |
| AAGTTTGCCTAGAGCTATAT+TGG | - | chr6_4:1928523-1928542 | None:intergenic | 35.0% | |
| GAGGAGAAGAAGAAGAAGAT+GGG | + | chr6_4:1927279-1927298 | Msa0970420:CDS | 40.0% | |
| GGTCGAAAACATGGTTGAAA+TGG | - | chr6_4:1927313-1927332 | None:intergenic | 40.0% | |
| GGAAATTACGGTCGAAAACA+TGG | - | chr6_4:1927322-1927341 | None:intergenic | 40.0% | |
| ! | AGGGCTCTATGAATCACTTT+TGG | + | chr6_4:1927750-1927769 | Msa0970420:intron | 40.0% |
| GAATTCATAGCCAACTGAAG+CGG | + | chr6_4:1927935-1927954 | Msa0970420:intron | 40.0% | |
| !! | ATCCATCCAAGTTTTGGTGA+CGG | + | chr6_4:1928005-1928024 | Msa0970420:CDS | 40.0% |
| ! | GTTAGAAACGTGAAGGCTTT+TGG | + | chr6_4:1928041-1928060 | Msa0970420:CDS | 40.0% |
| CCGGTGTCCATATAAAAAAG+AGG | + | chr6_4:1928346-1928365 | Msa0970420:three_prime_UTR | 40.0% | |
| TGTGTGTCCAATATAGCTCT+AGG | + | chr6_4:1928513-1928532 | Msa0970420:three_prime_UTR | 40.0% | |
| GAGGAGAAGAAGAAGAAGAT+GGG | + | chr6_4:1927279-1927298 | Msa0970420:CDS | 40.0% | |
| GGTCGAAAACATGGTTGAAA+TGG | - | chr6_4:1927313-1927332 | None:intergenic | 40.0% | |
| GGAAATTACGGTCGAAAACA+TGG | - | chr6_4:1927322-1927341 | None:intergenic | 40.0% | |
| ! | AGGGCTCTATGAATCACTTT+TGG | + | chr6_4:1927750-1927769 | Msa0970420:intron | 40.0% |
| GAATTCATAGCCAACTGAAG+CGG | + | chr6_4:1927935-1927954 | Msa0970420:intron | 40.0% | |
| !! | ATCCATCCAAGTTTTGGTGA+CGG | + | chr6_4:1928005-1928024 | Msa0970420:CDS | 40.0% |
| ! | GTTAGAAACGTGAAGGCTTT+TGG | + | chr6_4:1928041-1928060 | Msa0970420:CDS | 40.0% |
| CCGGTGTCCATATAAAAAAG+AGG | + | chr6_4:1928346-1928365 | Msa0970420:three_prime_UTR | 40.0% | |
| TGTGTGTCCAATATAGCTCT+AGG | + | chr6_4:1928513-1928532 | Msa0970420:three_prime_UTR | 40.0% | |
| GGAGGAGAAGAAGAAGAAGA+TGG | + | chr6_4:1927278-1927297 | Msa0970420:CDS | 45.0% | |
| AACTGCAACTGTTTGCGTTG+TGG | + | chr6_4:1927644-1927663 | Msa0970420:intron | 45.0% | |
| ! | ATGATGGAAACCGCTTCAGT+TGG | - | chr6_4:1927948-1927967 | None:intergenic | 45.0% |
| ACTGAAGCGGTTTCCATCAT+TGG | + | chr6_4:1927948-1927967 | Msa0970420:CDS | 45.0% | |
| ATCCGTCACCAAAACTTGGA+TGG | - | chr6_4:1928010-1928029 | None:intergenic | 45.0% | |
| !!! | AACGTGAAGGCTTTTGGGAT+TGG | + | chr6_4:1928047-1928066 | Msa0970420:CDS | 45.0% |
| !!! | ACGTGAAGGCTTTTGGGATT+GGG | + | chr6_4:1928048-1928067 | Msa0970420:CDS | 45.0% |
| GCAGATGAATCAAAGAAGGG+AGG | + | chr6_4:1928212-1928231 | Msa0970420:CDS | 45.0% | |
| GGAGGAGAAGAAGAAGAAGA+TGG | + | chr6_4:1927278-1927297 | Msa0970420:CDS | 45.0% | |
| AACTGCAACTGTTTGCGTTG+TGG | + | chr6_4:1927644-1927663 | Msa0970420:intron | 45.0% | |
| ! | ATGATGGAAACCGCTTCAGT+TGG | - | chr6_4:1927948-1927967 | None:intergenic | 45.0% |
| ACTGAAGCGGTTTCCATCAT+TGG | + | chr6_4:1927948-1927967 | Msa0970420:CDS | 45.0% | |
| ATCCGTCACCAAAACTTGGA+TGG | - | chr6_4:1928010-1928029 | None:intergenic | 45.0% | |
| !!! | AACGTGAAGGCTTTTGGGAT+TGG | + | chr6_4:1928047-1928066 | Msa0970420:CDS | 45.0% |
| !!! | ACGTGAAGGCTTTTGGGATT+GGG | + | chr6_4:1928048-1928067 | Msa0970420:CDS | 45.0% |
| GCAGATGAATCAAAGAAGGG+AGG | + | chr6_4:1928212-1928231 | Msa0970420:CDS | 45.0% | |
| ATGGTATGCACCTCAGACGA+AGG | + | chr6_4:1927257-1927276 | Msa0970420:CDS | 50.0% | |
| TTCTTCTCCTCCTTCGTCTG+AGG | - | chr6_4:1927270-1927289 | None:intergenic | 50.0% | |
| CCTAAACTAAGGGTGAGCCA+GGG | - | chr6_4:1927589-1927608 | None:intergenic | 50.0% | |
| ACCTAAACTAAGGGTGAGCC+AGG | - | chr6_4:1927590-1927609 | None:intergenic | 50.0% | |
| ATGGTATGCACCTCAGACGA+AGG | + | chr6_4:1927257-1927276 | Msa0970420:CDS | 50.0% | |
| TTCTTCTCCTCCTTCGTCTG+AGG | - | chr6_4:1927270-1927289 | None:intergenic | 50.0% | |
| CCTAAACTAAGGGTGAGCCA+GGG | - | chr6_4:1927589-1927608 | None:intergenic | 50.0% | |
| ACCTAAACTAAGGGTGAGCC+AGG | - | chr6_4:1927590-1927609 | None:intergenic | 50.0% | |
| GTATGCACCTCAGACGAAGG+AGG | + | chr6_4:1927260-1927279 | Msa0970420:CDS | 55.0% | |
| CCCTGGCTCACCCTTAGTTT+AGG | + | chr6_4:1927586-1927605 | Msa0970420:intron | 55.0% | |
| CGTCTGGCCTACTGCCTAAA+TGG | + | chr6_4:1928071-1928090 | Msa0970420:CDS | 55.0% | |
| GTATGCACCTCAGACGAAGG+AGG | + | chr6_4:1927260-1927279 | Msa0970420:CDS | 55.0% | |
| CCCTGGCTCACCCTTAGTTT+AGG | + | chr6_4:1927586-1927605 | Msa0970420:intron | 55.0% | |
| CGTCTGGCCTACTGCCTAAA+TGG | + | chr6_4:1928071-1928090 | Msa0970420:CDS | 55.0% | |
| !!! | GGCTTTTGGGATTGGGCGTC+TGG | + | chr6_4:1928055-1928074 | Msa0970420:CDS | 60.0% |
| !!! | GGCTTTTGGGATTGGGCGTC+TGG | + | chr6_4:1928055-1928074 | Msa0970420:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 1927257 | 1928580 | 1927257 | ID=Msa0970420;Name=Msa0970420 |
| chr6_4 | mRNA | 1927257 | 1928580 | 1927257 | ID=Msa0970420-mRNA-1;Parent=Msa0970420;Name=Msa0970420-mRNA-1;_AED=0.08;_eAED=0.18;_QI=0|0.5|0.33|1|1|1|3|303|105 |
| chr6_4 | exon | 1927257 | 1927322 | 1927257 | ID=Msa0970420-mRNA-1:exon:937;Parent=Msa0970420-mRNA-1 |
| chr6_4 | exon | 1927945 | 1928092 | 1927945 | ID=Msa0970420-mRNA-1:exon:938;Parent=Msa0970420-mRNA-1 |
| chr6_4 | exon | 1928174 | 1928580 | 1928174 | ID=Msa0970420-mRNA-1:exon:939;Parent=Msa0970420-mRNA-1 |
| chr6_4 | CDS | 1927257 | 1927322 | 1927257 | ID=Msa0970420-mRNA-1:cds;Parent=Msa0970420-mRNA-1 |
| chr6_4 | CDS | 1927945 | 1928092 | 1927945 | ID=Msa0970420-mRNA-1:cds;Parent=Msa0970420-mRNA-1 |
| chr6_4 | CDS | 1928174 | 1928277 | 1928174 | ID=Msa0970420-mRNA-1:cds;Parent=Msa0970420-mRNA-1 |
| chr6_4 | three_prime_UTR | 1928278 | 1928580 | 1928278 | ID=Msa0970420-mRNA-1:three_prime_utr;Parent=Msa0970420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
