AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0579290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0579290 MtrunA17_Chr4g0043041 95.687 997 25 3 1 995 1 981 0.0 1964
Msa0579290 MtrunA17_Chr6g0454411 74.446 947 201 8 56 995 65 977 0.0 1453
Msa0579290 MtrunA17_Chr3g0103771 63.830 423 136 3 573 995 435 840 0.0 573
Msa0579290 MtrunA17_Chr3g0103771 55.921 456 195 3 72 527 19 468 3.07e-174 529
Msa0579290 MtrunA17_Chr2g0282731 49.880 417 185 6 580 995 595 988 4.28e-128 412
Msa0579290 MtrunA17_Chr2g0282731 48.434 415 202 5 80 491 183 588 1.08e-120 393
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0579290 AT3G29320.1 69.606 964 233 8 41 995 50 962 0.0 1387
Msa0579290 AT3G46970.1 63.593 423 137 3 573 995 436 841 0.0 577
Msa0579290 AT3G46970.1 54.697 479 204 5 52 527 1 469 2.21e-174 530

Find 250 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTTTCTAATTGCTCTTC+TGG 0.206585 4_1:+83967848 None:intergenic
TTCTATGGAGAAGTTATTTC+AGG 0.216727 4_1:-83965436 Msa0579290:CDS
GGTAACTACATGCTGTATTT+TGG 0.229936 4_1:-83968202 Msa0579290:five_prime_UTR
GATCAGGAATGACGGTAAAT+TGG 0.232719 4_1:-83964805 Msa0579290:CDS
CGACGAATTGATGGGATCTT+TGG 0.243497 4_1:-83960924 Msa0579290:CDS
TTCTGTGTGTTTAGTACAGC+TGG 0.244339 4_1:-83961421 Msa0579290:intron
GATTTGAAGGCTTTCAATAC+TGG 0.245062 4_1:-83965277 Msa0579290:CDS
GTGATTCCCTTATCATAAAT+TGG 0.247012 4_1:-83966630 Msa0579290:CDS
TCTTATCCAGTTAGATTCTA+TGG 0.254682 4_1:-83965451 Msa0579290:CDS
ATTTGTACCACCACTTTATC+TGG 0.266367 4_1:+83964773 None:intergenic
AATTACCCTGCATGGGGATA+TGG 0.274456 4_1:-83965760 Msa0579290:CDS
GCAAGCTTATTACATGTCTA+TGG 0.286957 4_1:-83966569 Msa0579290:CDS
AATATAAATATCTTGGTATC+TGG 0.291902 4_1:+83968149 None:intergenic
CATGAAGTTGTTGCTGAGTA+TGG 0.298752 4_1:-83964248 Msa0579290:CDS
TTTAGAGGATGTGGCTAATC+AGG 0.301609 4_1:-83966364 Msa0579290:intron
GGACCACAATCGCAAGTTTA+TGG 0.313392 4_1:+83965324 None:intergenic
TGCATTCCAATTTATGATAA+GGG 0.315129 4_1:+83966624 None:intergenic
GGTAACAGATCTTGAGAAAT+TGG 0.317053 4_1:-83963571 Msa0579290:CDS
CGAACCATCATTGGCAGGTT+TGG 0.317570 4_1:+83963924 None:intergenic
TTCTTCAGTTGAAACTTTAG+AGG 0.319118 4_1:+83965303 None:intergenic
TGCTGAGGCTCTGAGGAAAC+TGG 0.320911 4_1:-83966394 Msa0579290:CDS
CCCATTCCAAATCAAACATT+TGG 0.324417 4_1:-83967920 Msa0579290:CDS
ATGAATATGCCAGAGATATA+TGG 0.324624 4_1:-83960396 Msa0579290:CDS
GACTGGAGGAGAAAGTATTT+TGG 0.329453 4_1:-83965392 Msa0579290:CDS
GACATGTGGAAATAATAAAA+AGG 0.329549 4_1:-83964423 Msa0579290:CDS
AACTGAAGAATTTGATTTGA+AGG 0.329927 4_1:-83965290 Msa0579290:CDS
CAGAAACGGATCCATCTTCT+AGG 0.345198 4_1:+83963645 None:intergenic
TCGCTGCCAAATGTTTGATT+TGG 0.348700 4_1:+83967914 None:intergenic
TTGCATTCCAATTTATGATA+AGG 0.352440 4_1:+83966623 None:intergenic
ATTATTGAATATAAATATCT+TGG 0.353087 4_1:+83968142 None:intergenic
AGTTGCAAAGTAAGCCTTAC+TGG 0.354966 4_1:+83966666 None:intergenic
AGGGCATTGTTAAATGCAAT+TGG 0.355293 4_1:-83966441 Msa0579290:CDS
AAGCTTGGGATATTACTAAA+AGG 0.359212 4_1:-83964673 Msa0579290:intron
TCTGCATTCCTGAGCTGATT+AGG 0.359974 4_1:-83964730 Msa0579290:CDS
CAGTTCCGCTGCTTTGTCGC+TGG 0.365462 4_1:+83967809 None:intergenic
GTCTTCTGTTCCAATCCATT+TGG 0.366997 4_1:+83963596 None:intergenic
CAAGGACTTCCCTAGCTACT+TGG 0.367893 4_1:-83960858 Msa0579290:CDS
CAGAGTGGATAGAATCAAAA+AGG 0.368398 4_1:-83963278 Msa0579290:CDS
ACCTTATCAGCATCCTCATT+TGG 0.370522 4_1:+83960121 None:intergenic
TTTCATGTTGCTTGTTCCAC+TGG 0.374129 4_1:+83961390 None:intergenic
CCTTCTATTGATTCATCCCC+AGG 0.374631 4_1:+83964905 None:intergenic
CCTTTACTTCTTCAAACCTT+GGG 0.375831 4_1:+83960984 None:intergenic
ATGAATGGATGTGTGCAAAT+TGG 0.376874 4_1:-83961361 Msa0579290:CDS
ACTAGAGAATATTGAGTTGC+CGG 0.377955 4_1:-83964177 Msa0579290:CDS
AGGAGGAAGTTGCTGAAAAC+TGG 0.381174 4_1:-83965687 Msa0579290:CDS
ACTTCTCCATAGAATCTAAC+TGG 0.381745 4_1:+83965445 None:intergenic
CTGAAGAAATTGCAGGGTTA+AGG 0.382529 4_1:-83961264 Msa0579290:CDS
GAATATTGAGTTGCCGGATT+CGG 0.385197 4_1:-83964171 Msa0579290:CDS
GAAACTGGGTTACAATTTAG+AGG 0.387483 4_1:-83966379 Msa0579290:CDS
CCATTCCCAAGGGCTGCATC+TGG 0.392098 4_1:+83965832 None:intergenic
ATAAACTCGACCACCGAATC+CGG 0.400669 4_1:+83964158 None:intergenic
TCCAAATGAGGATGCTGATA+AGG 0.400841 4_1:-83960122 Msa0579290:three_prime_UTR
TGTTGATGATAATGATATAA+AGG 0.401976 4_1:-83964093 Msa0579290:CDS
CATCAATTCGTCGTAGTTGT+AGG 0.404593 4_1:+83960934 None:intergenic
TTCTTGCTTTCTAGACTCCT+TGG 0.404594 4_1:-83965791 Msa0579290:CDS
AAAACAATTGTTTGTTCCTC+GGG 0.409628 4_1:-83962075 Msa0579290:CDS
AGATGCAATGTTTGATGTAC+AGG 0.409770 4_1:-83963196 Msa0579290:intron
TTTATCTATACCTAATGTGC+TGG 0.410380 4_1:+83961516 None:intergenic
GGCAGCGACAAAACAACATT+TGG 0.412285 4_1:-83967899 Msa0579290:CDS
GAAAACAATTGTTTGTTCCT+CGG 0.412817 4_1:-83962076 Msa0579290:CDS
CGTGCTGATTATTTCCTTGT+TGG 0.415896 4_1:-83960881 Msa0579290:CDS
ATCAGGAATGACGGTAAATT+GGG 0.418725 4_1:-83964804 Msa0579290:CDS
CTCCATTTCTCTAGTGCCTC+TGG 0.422856 4_1:+83964475 None:intergenic
TTCAAAAGATCTCCAATCTC+TGG 0.423187 4_1:+83961957 None:intergenic
GTGAATTGTCCCAGCACATT+AGG 0.424344 4_1:-83961526 Msa0579290:intron
ACTTCTTCAAACCTTGGGTC+TGG 0.424710 4_1:+83960989 None:intergenic
CTCAATTCTCCATATATCTC+TGG 0.425589 4_1:+83960387 None:intergenic
GTCCATTGCTTAGCTCCATC+TGG 0.426769 4_1:+83965412 None:intergenic
TCAACATCAATTTCCTCAAC+AGG 0.426786 4_1:+83964110 None:intergenic
CTTCATGACAGCGTATGCTT+TGG 0.427119 4_1:+83965246 None:intergenic
GCCTTTACTTCTTCAAACCT+TGG 0.427852 4_1:+83960983 None:intergenic
GAAAGAAGAACGAGTGAAAG+AGG 0.429235 4_1:+83968093 None:intergenic
CTACAACTACGACGAATTGA+TGG 0.429462 4_1:-83960933 Msa0579290:CDS
AAGGATAACATAAGCTCTAC+TGG 0.434141 4_1:+83960203 None:intergenic
TACCAGAGGCACTAGAGAAA+TGG 0.435864 4_1:-83964477 Msa0579290:CDS
GTTGAAATAAGAGAAGAAGT+TGG 0.438273 4_1:-83961319 Msa0579290:CDS
GTTAATCACGATCCAGAGAT+TGG 0.440645 4_1:-83961969 Msa0579290:CDS
AAATTCCAGAATAAAACAAA+TGG 0.446135 4_1:-83963675 Msa0579290:CDS
GTTTAAGCTGGGAGAAAGCT+TGG 0.447465 4_1:-83964688 Msa0579290:CDS
GCTCAGGAATGCAGAGTGTT+GGG 0.447491 4_1:+83964738 None:intergenic
CCAAATGTTTGATTTGGAAT+GGG 0.448607 4_1:+83967920 None:intergenic
ATTTGAAGGCTTTCAATACT+GGG 0.449329 4_1:-83965276 Msa0579290:CDS
GCACGAGCTGAAGAAATTGC+AGG 0.449587 4_1:-83961271 Msa0579290:CDS
ATGGAGTTTGACTCTTCTGC+AGG 0.451498 4_1:-83964458 Msa0579290:CDS
TCACAGTGAGATTGTAAAAG+AGG 0.453012 4_1:-83963847 Msa0579290:CDS
AATTCCAGAATAAAACAAAT+GGG 0.455147 4_1:-83963674 Msa0579290:CDS
AACATGAAATTTGCAATGAA+TGG 0.455487 4_1:-83961376 Msa0579290:CDS
TAGATGTGAAGGGTTTAAGC+TGG 0.457167 4_1:-83964700 Msa0579290:CDS
ACGTATAACGAAGGACGGTC+AGG 0.458652 4_1:-83965707 Msa0579290:CDS
TGAACACAAGTTGTCTCAAC+TGG 0.460163 4_1:-83960653 Msa0579290:intron
GCCCTTGGGAATGGAGGATT+AGG 0.460169 4_1:-83965823 Msa0579290:CDS
TCTCTCAGAATGTTCACAAA+AGG 0.460769 4_1:-83960302 Msa0579290:three_prime_UTR
GCAACACTAACATTGTAATC+AGG 0.461165 4_1:+83961569 None:intergenic
ATCGTTTCTCTGAATTTCCC+AGG 0.466281 4_1:+83965477 None:intergenic
TTCCTCAGAGCCTCAGCATA+AGG 0.466595 4_1:+83966399 None:intergenic
ATGCCTTGTCAACTTCCTCT+TGG 0.467018 4_1:+83960831 None:intergenic
CTACCAGTTTGCAGATAATG+AGG 0.467112 4_1:-83963310 Msa0579290:intron
TCATTTATCAAAGAGAAAAC+AGG 0.468618 4_1:-83963234 Msa0579290:CDS
CAGGAGCCAGATGCAGCCCT+TGG 0.468994 4_1:-83965838 Msa0579290:CDS
CCAGATGCAGCCCTTGGGAA+TGG 0.470381 4_1:-83965832 Msa0579290:CDS
TGTACATCAAACATTGCATC+TGG 0.471752 4_1:+83963198 None:intergenic
GCCAAATGTTTGATTTGGAA+TGG 0.475175 4_1:+83967919 None:intergenic
TTAGCCATGCGAACCATCAT+TGG 0.477716 4_1:+83963915 None:intergenic
TTACTGGGCTCAAATTTCTC+AGG 0.477856 4_1:+83966682 None:intergenic
CCTGGGGATGAATCAATAGA+AGG 0.480958 4_1:-83964905 Msa0579290:CDS
GCACGCTTTGAAAAGAGATC+AGG 0.482626 4_1:-83964821 Msa0579290:CDS
ATTAATATCCTAATCAGCTC+AGG 0.483954 4_1:+83964722 None:intergenic
GTTGCTGAAATGCTAATTCC+TGG 0.484765 4_1:-83961551 Msa0579290:CDS
TGATTATTTCCTTGTTGGCA+AGG 0.485154 4_1:-83960876 Msa0579290:CDS
TAGTTTGAATAATCCATCCA+TGG 0.487311 4_1:+83960084 None:intergenic
GGGCATTGTTAAATGCAATT+GGG 0.488583 4_1:-83966440 Msa0579290:CDS
GGTTATATTGTTCCATCCCA+TGG 0.489415 4_1:-83960101 Msa0579290:three_prime_UTR
GGGTTACAATTTAGAGGATG+TGG 0.490297 4_1:-83966373 Msa0579290:CDS
ATTGGGAATTTACAACTCTC+AGG 0.491640 4_1:-83966423 Msa0579290:CDS
TGAGAAATTTGAGCCCAGTA+AGG 0.492541 4_1:-83966680 Msa0579290:CDS
AGCTCAGGAATGCAGAGTGT+TGG 0.492601 4_1:+83964737 None:intergenic
AAAATCATAACCAAATGGAT+TGG 0.492703 4_1:-83963606 Msa0579290:CDS
CCATGCGAACCATCATTGGC+AGG 0.495713 4_1:+83963919 None:intergenic
GTAAAATTCATCACAGATGT+AGG 0.497209 4_1:-83961999 Msa0579290:CDS
CATGTCTATGGAGTATCTAC+AGG 0.498390 4_1:-83966557 Msa0579290:intron
TGATCCAAACCTGCCAATGA+TGG 0.501005 4_1:-83963928 Msa0579290:CDS
ACGGCAGTTACTGAATATCA+TGG 0.501069 4_1:-83962147 Msa0579290:CDS
TGCTGGGACAATTCACTGCC+AGG 0.501865 4_1:+83961533 None:intergenic
CCCAAGGTTTGAAGAAGTAA+AGG 0.502177 4_1:-83960984 Msa0579290:CDS
GAAAGAAAGAGCAGAAGGAA+AGG 0.502282 4_1:-83961242 Msa0579290:intron
TATTGAGTTGCCGGATTCGG+TGG 0.502355 4_1:-83964168 Msa0579290:CDS
TCTGTTACATTCTATACCCT+GGG 0.504284 4_1:-83964922 Msa0579290:CDS
GAACTGAAAGAACGACTCAT+TGG 0.504413 4_1:-83967792 Msa0579290:CDS
ATGGCTAACCTATGTGTTGT+TGG 0.505350 4_1:-83963900 Msa0579290:CDS
TCTTGGCACTCCAAGTAGCT+AGG 0.505786 4_1:+83960848 None:intergenic
TTTAAGCTGGGAGAAAGCTT+GGG 0.507352 4_1:-83964687 Msa0579290:CDS
AGCGTATTCATGAATACAAA+CGG 0.507526 4_1:-83962166 Msa0579290:CDS
GGGGATATGGACTTAGATAC+AGG 0.507764 4_1:-83965747 Msa0579290:CDS
TAGGATATTAATAGATGTGA+AGG 0.509727 4_1:-83964711 Msa0579290:CDS
ATGTCAATCTTGAACACAGC+TGG 0.511229 4_1:-83960451 Msa0579290:CDS
CAAAGCGTGCAATGATATCC+TGG 0.512626 4_1:+83964834 None:intergenic
ATAACATTATTTCTGTTCTG+TGG 0.512820 4_1:-83968049 Msa0579290:five_prime_UTR
TGCAAATTGGAACTCTCGAT+GGG 0.513093 4_1:-83961348 Msa0579290:CDS
TTAGTAAAATCATAACCAAA+TGG 0.516483 4_1:-83963611 Msa0579290:CDS
AACACTGAATTACCCTGCAT+GGG 0.518781 4_1:-83965767 Msa0579290:CDS
ATTTATAGATGGGAAATCCC+TGG 0.520518 4_1:-83965495 Msa0579290:intron
CGTATAAATTCAGCAGTGAC+CGG 0.523558 4_1:-83960426 Msa0579290:CDS
TCTATGGAGAAGTTATTTCA+GGG 0.524340 4_1:-83965435 Msa0579290:CDS
ATCTGTTACATTCTATACCC+TGG 0.525611 4_1:-83964923 Msa0579290:CDS
CAACACTGAATTACCCTGCA+TGG 0.525876 4_1:-83965768 Msa0579290:CDS
GCTTATGATGTTCCAATACC+TGG 0.526685 4_1:-83965364 Msa0579290:CDS
AATGGATTGGAACAGAAGAC+TGG 0.527079 4_1:-83963593 Msa0579290:CDS
TACCATTCTCAACAACCTGC+AGG 0.529812 4_1:-83967965 Msa0579290:CDS
TACCACCACTTTATCTGGAA+GGG 0.530834 4_1:+83964778 None:intergenic
TTTGTGAACATTCTGAGAGA+AGG 0.536330 4_1:+83960305 None:intergenic
AGGAGCCAGATGCAGCCCTT+GGG 0.536797 4_1:-83965837 Msa0579290:CDS
TGTGTTTAGTACAGCTGGGA+TGG 0.537168 4_1:-83961416 Msa0579290:intron
GCTAACCTATGTGTTGTTGG+TGG 0.537986 4_1:-83963897 Msa0579290:CDS
TGGCATATTCATGAATAGTC+CGG 0.538204 4_1:+83960407 None:intergenic
ATATTGTTCCATCCCATGGA+TGG 0.538766 4_1:-83960097 Msa0579290:three_prime_UTR
CCACCATAAACTTGCGATTG+TGG 0.538883 4_1:-83965327 Msa0579290:CDS
GAATTGATGGGATCTTTGGA+AGG 0.539315 4_1:-83960920 Msa0579290:CDS
CTAAGTCCATATCCCCATGC+AGG 0.541539 4_1:+83965754 None:intergenic
GGATCTTTGGAAGGGAATGA+AGG 0.543201 4_1:-83960911 Msa0579290:CDS
GGCCTAATCCTCCATTCCCA+AGG 0.543436 4_1:+83965821 None:intergenic
TAAGGTCGGGATTACAGAAA+CGG 0.543894 4_1:+83963631 None:intergenic
TGCCTGCAGGTTGTTGAGAA+TGG 0.544681 4_1:+83967963 None:intergenic
TTAAGGAAAGAAAGAGCAGA+AGG 0.545172 4_1:-83961247 Msa0579290:CDS
CTTCTATTGATTCATCCCCA+GGG 0.545352 4_1:+83964906 None:intergenic
GACAAACGAGAAGCAGAAGA+TGG 0.548966 4_1:-83963996 Msa0579290:CDS
AATTTCCTCAACAGGATCAT+CGG 0.550548 4_1:+83964118 None:intergenic
AGATGTGAAGGGTTTAAGCT+GGG 0.551577 4_1:-83964699 Msa0579290:CDS
TGCAGTTTGTACCAGACCCA+AGG 0.553369 4_1:-83961000 Msa0579290:intron
GATGGAGCTAAGCAATGGAC+TGG 0.553513 4_1:-83965409 Msa0579290:CDS
GAAGTTATTTCAGGGCCAGA+TGG 0.555318 4_1:-83965427 Msa0579290:CDS
GTAAAGGCATATGTTAGAAG+TGG 0.555712 4_1:-83960968 Msa0579290:CDS
ATTATGCTCAGCCTCTCTCC+AGG 0.555876 4_1:-83964852 Msa0579290:CDS
CTTGGCACTCCAAGTAGCTA+GGG 0.557235 4_1:+83960849 None:intergenic
TTTATAGATGGGAAATCCCT+GGG 0.557702 4_1:-83965494 Msa0579290:intron
ATGGGGTGACACCTAGAAGA+TGG 0.559245 4_1:-83963656 Msa0579290:CDS
TGAATAATCCATCCATGGGA+TGG 0.559784 4_1:+83960089 None:intergenic
CCTGCCAATGATGGTTCGCA+TGG 0.561781 4_1:-83963919 Msa0579290:CDS
GTACCACCACTTTATCTGGA+AGG 0.562027 4_1:+83964777 None:intergenic
TACAACTACGACGAATTGAT+GGG 0.563220 4_1:-83960932 Msa0579290:CDS
GGACTCCCTTCCAGATAAAG+TGG 0.565184 4_1:-83964783 Msa0579290:CDS
CGAAGAAGAAGAAGATGAAG+TGG 0.565544 4_1:-83964024 Msa0579290:CDS
TTGGGAATGGAGGATTAGGC+CGG 0.569055 4_1:-83965819 Msa0579290:CDS
TGCAACGAATTCATTTGAAG+TGG 0.569514 4_1:+83966765 None:intergenic
AGTTTGAATAATCCATCCAT+GGG 0.570978 4_1:+83960085 None:intergenic
AATTTATGATAAGGGAATCA+CGG 0.571565 4_1:+83966632 None:intergenic
CTAGAAAGCAAGAAGCAAGC+CGG 0.574391 4_1:+83965800 None:intergenic
GATGCAGCCCTTGGGAATGG+AGG 0.575620 4_1:-83965829 Msa0579290:CDS
CGGCAGTTACTGAATATCAT+GGG 0.576863 4_1:-83962146 Msa0579290:CDS
TCGATGAACATAATTCTACA+AGG 0.576901 4_1:+83960184 None:intergenic
GAAATTGGCTGTACTTCGCA+AGG 0.577155 4_1:-83963556 Msa0579290:intron
TCTGTGTGTTTAGTACAGCT+GGG 0.577930 4_1:-83961420 Msa0579290:intron
GGCCAGATGGAGCTAAGCAA+TGG 0.578954 4_1:-83965414 Msa0579290:CDS
GTTGCAAAGTAAGCCTTACT+GGG 0.579338 4_1:+83966667 None:intergenic
TTGGAAGGGAATGAAGGCTA+TGG 0.582974 4_1:-83960905 Msa0579290:CDS
TTTATTATTTCCACATGTCG+AGG 0.583310 4_1:+83964427 None:intergenic
CAACATATGTTCAAGCCAAG+AGG 0.583384 4_1:-83962025 Msa0579290:CDS
TATGGACTTAGATACAGGTA+TGG 0.584953 4_1:-83965742 Msa0579290:CDS
AGGATATTAATAGATGTGAA+GGG 0.588908 4_1:-83964710 Msa0579290:CDS
TAGGGAAGTCCTTGCCAACA+AGG 0.589757 4_1:+83960867 None:intergenic
GCTGAGGCTCTGAGGAAACT+GGG 0.590579 4_1:-83966393 Msa0579290:CDS
GGATTTACTTCCTCGACATG+TGG 0.591364 4_1:-83964437 Msa0579290:CDS
GTTTAGTACAGCTGGGATGG+AGG 0.592504 4_1:-83961413 Msa0579290:intron
TCGTTTCTCTGAATTTCCCA+GGG 0.593399 4_1:+83965478 None:intergenic
TTATCTATACCTAATGTGCT+GGG 0.596409 4_1:+83961517 None:intergenic
CAACATATGAATATTATGAG+AGG 0.596709 4_1:-83966603 Msa0579290:CDS
TCTTGCCGATGATCCTGTTG+AGG 0.596729 4_1:-83964123 Msa0579290:CDS
AAAGGCTTGAAAACTGAGGA+AGG 0.599866 4_1:-83960284 Msa0579290:three_prime_UTR
AATGAAAGAATTGAATGCTG+AGG 0.602638 4_1:-83962102 Msa0579290:CDS
GCCTAATCCTCCATTCCCAA+GGG 0.606925 4_1:+83965822 None:intergenic
AGGGTAATTCAGTGTTGCCA+AGG 0.609943 4_1:+83965774 None:intergenic
TAAGTCCATATCCCCATGCA+GGG 0.610745 4_1:+83965755 None:intergenic
AATTGATGGGATCTTTGGAA+GGG 0.613386 4_1:-83960919 Msa0579290:CDS
GTCCTTATGCTGAGGCTCTG+AGG 0.613621 4_1:-83966401 Msa0579290:CDS
ATGAAGTTGTTGCTGAGTAT+GGG 0.614498 4_1:-83964247 Msa0579290:CDS
GAAGAAGAAGAAGATGAAGT+GGG 0.616994 4_1:-83964023 Msa0579290:CDS
TGAAAAGAGATCAGGAATGA+CGG 0.617393 4_1:-83964813 Msa0579290:CDS
TATAACGAAGGACGGTCAGG+AGG 0.619104 4_1:-83965704 Msa0579290:CDS
TGTCATGAAGAATGCAGAGA+AGG 0.620102 4_1:-83965233 Msa0579290:intron
AGGTGAGCTTGAATGCCTGC+AGG 0.620576 4_1:+83967950 None:intergenic
CACGAGCTGAAGAAATTGCA+GGG 0.620721 4_1:-83961270 Msa0579290:CDS
AACATATGAATATTATGAGA+GGG 0.623422 4_1:-83966602 Msa0579290:CDS
GATTTGGAATGGGAATGTAA+AGG 0.624865 4_1:+83967930 None:intergenic
GGAGCTAAGCAATGGACTGG+AGG 0.628655 4_1:-83965406 Msa0579290:CDS
TGCAATGATATCCTGGAGAG+AGG 0.629144 4_1:+83964841 None:intergenic
AAGAAGAAGAAGATGAAGTG+GGG 0.630558 4_1:-83964022 Msa0579290:CDS
ATTCAAACAACGTATAACGA+AGG 0.632464 4_1:-83965716 Msa0579290:CDS
ACAGCTGGGATGGAGGCCAG+TGG 0.632889 4_1:-83961406 Msa0579290:CDS
GTGCAAATTGGAACTCTCGA+TGG 0.634864 4_1:-83961349 Msa0579290:CDS
GTGCCAAGAGGAAGTTGACA+AGG 0.636085 4_1:-83960834 Msa0579290:CDS
TTTGAAGGCTTTCAATACTG+GGG 0.639183 4_1:-83965275 Msa0579290:CDS
AGACAACTTGTGTTCAACAC+AGG 0.639630 4_1:+83960660 None:intergenic
ATGGATTGGAACAGAAGACT+GGG 0.645354 4_1:-83963592 Msa0579290:CDS
CCACAATCGCAAGTTTATGG+TGG 0.651435 4_1:+83965327 None:intergenic
ACTCTCAGGTCCTTATGCTG+AGG 0.656696 4_1:-83966409 Msa0579290:CDS
GAAGAAAATGATGATGATGA+CGG 0.656959 4_1:-83964047 Msa0579290:CDS
ATTCCAGAATAAAACAAATG+GGG 0.658074 4_1:-83963673 Msa0579290:CDS
AAACAACGTATAACGAAGGA+CGG 0.658557 4_1:-83965712 Msa0579290:CDS
TGTTGCCAGCGACAAAGCAG+CGG 0.667849 4_1:-83967814 Msa0579290:CDS
CACAAAAGGCTTGAAAACTG+AGG 0.669784 4_1:-83960288 Msa0579290:three_prime_UTR
CAACAAGGAAATAATCAGCA+CGG 0.670194 4_1:+83960882 None:intergenic
TAGCTACTTGGAGTGCCAAG+AGG 0.674127 4_1:-83960846 Msa0579290:CDS
GTGCCTCTGGTAGAACTGTG+TGG 0.675525 4_1:+83964488 None:intergenic
ATGAGGATCTGCAATCAGAG+TGG 0.676696 4_1:-83963293 Msa0579290:CDS
ACACTGAATTACCCTGCATG+GGG 0.680238 4_1:-83965766 Msa0579290:CDS
CTCCCTTCCAGATAAAGTGG+TGG 0.681896 4_1:-83964780 Msa0579290:CDS
AGTTGCTGAAAACTGGCTTG+AGG 0.695370 4_1:-83965680 Msa0579290:intron
AAAGAACGACTCATTGGACA+AGG 0.698404 4_1:-83967786 Msa0579290:intron
AAACCACACAGTTCTACCAG+AGG 0.720864 4_1:-83964491 Msa0579290:CDS
CTGTTACATTCTATACCCTG+GGG 0.720986 4_1:-83964921 Msa0579290:CDS
GCAAATTGGAACTCTCGATG+GGG 0.738537 4_1:-83961347 Msa0579290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTGAATATAAATATCT+TGG + chr4_1:83960053-83960072 None:intergenic 10.0%
!!! GATATCTTTTAAATATAAAT+TGG + chr4_1:83963571-83963590 None:intergenic 10.0%
!! TACATTCTAATATATTATTC+AGG - chr4_1:83960482-83960501 Msa0579290:intron 15.0%
!!! ACATTGAAACTTTAAAAATA+TGG + chr4_1:83960957-83960976 None:intergenic 15.0%
!! GATATAATACTAAAAAATCT+TGG + chr4_1:83961331-83961350 None:intergenic 15.0%
!! ATACATTGTACTATAATATT+TGG + chr4_1:83962032-83962051 None:intergenic 15.0%
!!! ATGATTTATATTTGAGATAT+AGG + chr4_1:83963148-83963167 None:intergenic 15.0%
!! ATATCTCAAATATAAATCAT+CGG - chr4_1:83963148-83963167 Msa0579290:intron 15.0%
!! ATTGTTCATATTAACATAAA+AGG + chr4_1:83964413-83964432 None:intergenic 15.0%
!!! TTCAATCTTTTTCTTTTAAA+CGG - chr4_1:83965644-83965663 Msa0579290:intron 15.0%
!!! ATTGTTATTTAAACATCAAA+AGG + chr4_1:83966327-83966346 None:intergenic 15.0%
!! TATTCATTTATTTAACTACT+GGG + chr4_1:83966405-83966424 None:intergenic 15.0%
!! ATATTCATTTATTTAACTAC+TGG + chr4_1:83966406-83966425 None:intergenic 15.0%
!!! GTACTTTCTTAATTATTTTA+TGG - chr4_1:83968039-83968058 Msa0579290:five_prime_UTR 15.0%
!! AATATAAATATCTTGGTATC+TGG + chr4_1:83960046-83960065 None:intergenic 20.0%
!! TATATTAGAATGTAAAGAAG+TGG + chr4_1:83960476-83960495 None:intergenic 20.0%
!! ATAAATCTAACATAAAACCA+TGG + chr4_1:83960645-83960664 None:intergenic 20.0%
!! AATATCTTTCCATGTAAATT+TGG - chr4_1:83960779-83960798 Msa0579290:intron 20.0%
!! GAAATAAAGATTAGTGATTA+TGG - chr4_1:83960822-83960841 Msa0579290:CDS 20.0%
!! TTATTAAATCTGAGCTAATA+TGG - chr4_1:83960857-83960876 Msa0579290:CDS 20.0%
!! GGAAATGTAATAACTAAATA+CGG - chr4_1:83960912-83960931 Msa0579290:CDS 20.0%
!! GAAATGTAATAACTAAATAC+GGG - chr4_1:83960913-83960932 Msa0579290:CDS 20.0%
!!! TTTTAATGAATTTCGTTTGA+AGG - chr4_1:83960990-83961009 Msa0579290:CDS 20.0%
!! AGGAAACTTGATTTATATAA+AGG + chr4_1:83961108-83961127 None:intergenic 20.0%
!!! TTTTTTTTCTTCTGCAAATA+TGG - chr4_1:83961364-83961383 Msa0579290:CDS 20.0%
!! CCAATAAGGAATTAATATTT+AGG + chr4_1:83961391-83961410 None:intergenic 20.0%
!! CCTAAATATTAATTCCTTAT+TGG - chr4_1:83961388-83961407 Msa0579290:CDS 20.0%
!! AACATATGAATATTATGAGA+GGG - chr4_1:83961590-83961609 Msa0579290:intron 20.0%
!! ATTGTTACATGTTTGTTTAA+TGG - chr4_1:83962104-83962123 Msa0579290:CDS 20.0%
!! AAAAAAGTGAGAATATTGTT+AGG - chr4_1:83962127-83962146 Msa0579290:CDS 20.0%
!!! CTTGCTTTTTTTTTTTTTGA+AGG + chr4_1:83962168-83962187 None:intergenic 20.0%
!!! GTTTTTTTTGTAGTTTTTCT+TGG + chr4_1:83962243-83962262 None:intergenic 20.0%
!!! GAGAAGTTTTTTTTCATTTA+TGG - chr4_1:83963170-83963189 Msa0579290:intron 20.0%
!! AATAATAAAAAGGATAGATG+AGG - chr4_1:83963779-83963798 Msa0579290:intron 20.0%
!!! TGTTGATGATAATGATATAA+AGG - chr4_1:83964099-83964118 Msa0579290:CDS 20.0%
!!! AGTTTTTAATGAATTTTACG+AGG - chr4_1:83964369-83964388 Msa0579290:intron 20.0%
!! AAATTCCAGAATAAAACAAA+TGG - chr4_1:83964517-83964536 Msa0579290:intron 20.0%
!! AATTCCAGAATAAAACAAAT+GGG - chr4_1:83964518-83964537 Msa0579290:intron 20.0%
!!! ATTTGGTTATGATTTTACTA+AGG + chr4_1:83964582-83964601 None:intergenic 20.0%
!! TTAGTAAAATCATAACCAAA+TGG - chr4_1:83964581-83964600 Msa0579290:intron 20.0%
!! ATTTAAGAATCCATCATAAA+GGG + chr4_1:83965433-83965452 None:intergenic 20.0%
!! TATTTAAGAATCCATCATAA+AGG + chr4_1:83965434-83965453 None:intergenic 20.0%
!!! TATTTTTTTTATAATCGCCA+TGG - chr4_1:83965504-83965523 Msa0579290:intron 20.0%
!!! TCAATCTTTTTCTTTTAAAC+GGG - chr4_1:83965645-83965664 Msa0579290:intron 20.0%
!!! GCCATATTTTATATTTTCAT+TGG - chr4_1:83965730-83965749 Msa0579290:CDS 20.0%
!! GCCAATGAAAATATAAAATA+TGG + chr4_1:83965734-83965753 None:intergenic 20.0%
!!! TTGGCTAGATATAATATTTT+TGG - chr4_1:83965749-83965768 Msa0579290:CDS 20.0%
!!! TAAATGACATATCTATTTTC+AGG - chr4_1:83966000-83966019 Msa0579290:intron 20.0%
!! AATGAATATCTCAACAAAAA+TGG - chr4_1:83966417-83966436 Msa0579290:CDS 20.0%
!! CTGCAGAAAAATAAAATTAT+AGG - chr4_1:83966497-83966516 Msa0579290:intron 20.0%
!! ATTATGATACATAATTCTGT+TGG + chr4_1:83967141-83967160 None:intergenic 20.0%
!! ATCATAATCTCAATATAATG+TGG - chr4_1:83967153-83967172 Msa0579290:intron 20.0%
!!! ATAACATTATTTCTGTTCTG+TGG - chr4_1:83960143-83960162 Msa0579290:three_prime_UTR 25.0%
! TTTAGATAGTAGCTTTCTTA+AGG - chr4_1:83960706-83960725 Msa0579290:intron 25.0%
! TCCATGTAAATTTGGATTAA+TGG - chr4_1:83960787-83960806 Msa0579290:intron 25.0%
! TCCATTAATCCAAATTTACA+TGG + chr4_1:83960791-83960810 None:intergenic 25.0%
! TTATATAAAGGCAAGTCTTA+GGG + chr4_1:83961096-83961115 None:intergenic 25.0%
! TTTATATAAAGGCAAGTCTT+AGG + chr4_1:83961097-83961116 None:intergenic 25.0%
! AAAATTGTCAATCTATTACG+AGG + chr4_1:83961158-83961177 None:intergenic 25.0%
! AATTTATGATAAGGGAATCA+CGG + chr4_1:83961563-83961582 None:intergenic 25.0%
! TGCATTCCAATTTATGATAA+GGG + chr4_1:83961571-83961590 None:intergenic 25.0%
! TTGCATTCCAATTTATGATA+AGG + chr4_1:83961572-83961591 None:intergenic 25.0%
! CAACATATGAATATTATGAG+AGG - chr4_1:83961589-83961608 Msa0579290:intron 25.0%
!! CAGATAACAATTTTGTGAAA+TGG + chr4_1:83961995-83962014 None:intergenic 25.0%
! TAGTACAATGTATCTCTTAT+AGG - chr4_1:83962039-83962058 Msa0579290:CDS 25.0%
! TTCTATTGACAACAAAGATT+AGG - chr4_1:83962064-83962083 Msa0579290:CDS 25.0%
! TAACAATCTTGGTTCAAATA+TGG + chr4_1:83962091-83962110 None:intergenic 25.0%
! AAACAAACATGTAACAATCT+TGG + chr4_1:83962102-83962121 None:intergenic 25.0%
! CGAATGAAATGATAGTAATA+TGG - chr4_1:83962275-83962294 Msa0579290:intron 25.0%
!!! AGTTTGCTTTTAAATATGCT+CGG + chr4_1:83962321-83962340 None:intergenic 25.0%
!!! AACTGAAGAATTTGATTTGA+AGG - chr4_1:83962902-83962921 Msa0579290:intron 25.0%
!! CAATTTGAAACAAGAGAATA+AGG + chr4_1:83963117-83963136 None:intergenic 25.0%
! TAGGATATTAATAGATGTGA+AGG - chr4_1:83963481-83963500 Msa0579290:intron 25.0%
! AGGATATTAATAGATGTGAA+GGG - chr4_1:83963482-83963501 Msa0579290:intron 25.0%
!!! TATTAGAGTAGCTCTAATAA+TGG + chr4_1:83963597-83963616 None:intergenic 25.0%
!! TAGTTTGATCTCTCTTTTAA+TGG - chr4_1:83963651-83963670 Msa0579290:CDS 25.0%
! GACATGTGGAAATAATAAAA+AGG - chr4_1:83963769-83963788 Msa0579290:intron 25.0%
! GTAAGGTTGTAATGTTTATT+TGG - chr4_1:83963804-83963823 Msa0579290:intron 25.0%
! TTGTAGAGAACAAAAAAGAA+TGG - chr4_1:83964230-83964249 Msa0579290:CDS 25.0%
! ATTCCAGAATAAAACAAATG+GGG - chr4_1:83964519-83964538 Msa0579290:intron 25.0%
! AAAATCATAACCAAATGGAT+TGG - chr4_1:83964586-83964605 Msa0579290:intron 25.0%
! CAAGGTAAATGAATTTAACT+GGG - chr4_1:83964654-83964673 Msa0579290:intron 25.0%
! GTCACATTATAATGTCAAAA+TGG - chr4_1:83964762-83964781 Msa0579290:CDS 25.0%
!!! TGTGTTATTTAGTTCCTTTA+TGG - chr4_1:83964849-83964868 Msa0579290:CDS 25.0%
! GTAGAAAAATGTATCCATAA+AGG + chr4_1:83964866-83964885 None:intergenic 25.0%
! TCATTTATCAAAGAGAAAAC+AGG - chr4_1:83964958-83964977 Msa0579290:intron 25.0%
!!! TGTTTATTTTCACCTTTTCA+AGG - chr4_1:83965112-83965131 Msa0579290:intron 25.0%
! GATTTCTATAACATTAGAGA+TGG + chr4_1:83965270-83965289 None:intergenic 25.0%
! GAAATCCTTGTAACATTATA+CGG - chr4_1:83965284-83965303 Msa0579290:CDS 25.0%
!!! ATGATGTTATTTTACAGCAT+AGG + chr4_1:83965375-83965394 None:intergenic 25.0%
! TTTAAGAATCCATCATAAAG+GGG + chr4_1:83965432-83965451 None:intergenic 25.0%
!! TCTATTCAGCTGTTATTTAT+TGG + chr4_1:83965886-83965905 None:intergenic 25.0%
! TATCATTAACCATGAATTGA+GGG + chr4_1:83965982-83966001 None:intergenic 25.0%
! TTATCATTAACCATGAATTG+AGG + chr4_1:83965983-83966002 None:intergenic 25.0%
! TTTGGAAAATGTTTAATTCC+AGG - chr4_1:83966372-83966391 Msa0579290:CDS 25.0%
! TTGGAAAATGTTTAATTCCA+GGG - chr4_1:83966373-83966392 Msa0579290:CDS 25.0%
! AACATGAAATTTGCAATGAA+TGG - chr4_1:83966816-83966835 Msa0579290:intron 25.0%
! GTTCTTAAAATCAGAATACT+TGG - chr4_1:83966976-83966995 Msa0579290:intron 25.0%
! AAAGAAAAACAAGAAGGAAA+AGG + chr4_1:83967017-83967036 None:intergenic 25.0%
! TGTATGAAAGAAAAACAAGA+AGG + chr4_1:83967023-83967042 None:intergenic 25.0%
! AAACAAGCTCAAATAAAATG+TGG - chr4_1:83967079-83967098 Msa0579290:intron 25.0%
!!! TGTTACTTACTTTTTGATCA+CGG + chr4_1:83967388-83967407 None:intergenic 25.0%
! AATTCATCCAAAAAGAATTG+CGG + chr4_1:83967490-83967509 None:intergenic 25.0%
! TTGTTTAATGCATAATGCAT+AGG - chr4_1:83967620-83967639 Msa0579290:intron 25.0%
!! AAAGCATGTAAAACTTTTCA+AGG + chr4_1:83967843-83967862 None:intergenic 25.0%
!! TTGAAAAGTTTTACATGCTT+TGG - chr4_1:83967842-83967861 Msa0579290:CDS 25.0%
!! CCAAATGTTTGATTTGGAAT+GGG + chr4_1:83960275-83960294 None:intergenic 30.0%
! AGTTTGATGGAAATTTTGCT+GGG - chr4_1:83960564-83960583 Msa0579290:intron 30.0%
! GAAATTTTGCTGGGTTTAAT+TGG - chr4_1:83960573-83960592 Msa0579290:intron 30.0%
!!! TTGGTTACTAGTGCATTTTT+TGG - chr4_1:83960592-83960611 Msa0579290:intron 30.0%
!!! TTACTAGTGCATTTTTTGGA+AGG - chr4_1:83960596-83960615 Msa0579290:intron 30.0%
!! TTTATCCCTTTGAAGTTTGT+TGG - chr4_1:83960888-83960907 Msa0579290:CDS 30.0%
TATATAAAGGCAAGTCTTAG+GGG + chr4_1:83961095-83961114 None:intergenic 30.0%
ATTAGTTCCATTACGATTCA+AGG + chr4_1:83961128-83961147 None:intergenic 30.0%
AGTGTTCTCTTGAAGTTATA+AGG - chr4_1:83961252-83961271 Msa0579290:CDS 30.0%
GTGATTCCCTTATCATAAAT+TGG - chr4_1:83961562-83961581 Msa0579290:CDS 30.0%
AGTATCTACAGGTTCATATT+GGG - chr4_1:83961646-83961665 Msa0579290:intron 30.0%
TCACAATTGGGAAAAAATGT+AGG + chr4_1:83961726-83961745 None:intergenic 30.0%
!!! ACATTTTTTCCCAATTGTGA+AGG - chr4_1:83961726-83961745 Msa0579290:intron 30.0%
!!! CATTTTTTCCCAATTGTGAA+GGG - chr4_1:83961727-83961746 Msa0579290:intron 30.0%
! TTTTGTGAAATGGACAGAAA+GGG + chr4_1:83961985-83962004 None:intergenic 30.0%
! ATTTTGTGAAATGGACAGAA+AGG + chr4_1:83961986-83962005 None:intergenic 30.0%
AATTGTTATCTGTCATCTTG+AGG - chr4_1:83962003-83962022 Msa0579290:CDS 30.0%
ACTATCATTTCATTCGTGAA+CGG + chr4_1:83962271-83962290 None:intergenic 30.0%
ATTCAAACAACGTATAACGA+AGG - chr4_1:83962476-83962495 Msa0579290:intron 30.0%
GGCAGCAATAATATGAAAAT+TGG + chr4_1:83962577-83962596 None:intergenic 30.0%
! CTTTCTTCTATCACTCTTTT+TGG - chr4_1:83962627-83962646 Msa0579290:intron 30.0%
TGACGTGTCTATTTATAGAT+GGG - chr4_1:83962687-83962706 Msa0579290:intron 30.0%
TCTTATCCAGTTAGATTCTA+TGG - chr4_1:83962741-83962760 Msa0579290:intron 30.0%
! TTCTATGGAGAAGTTATTTC+AGG - chr4_1:83962756-83962775 Msa0579290:intron 30.0%
! TCTATGGAGAAGTTATTTCA+GGG - chr4_1:83962757-83962776 Msa0579290:intron 30.0%
TTCTTCAGTTGAAACTTTAG+AGG + chr4_1:83962892-83962911 None:intergenic 30.0%
ATTTGAAGGCTTTCAATACT+GGG - chr4_1:83962916-83962935 Msa0579290:intron 30.0%
!! TCTTCTTCAAAAGTACTTTC+TGG - chr4_1:83963035-83963054 Msa0579290:intron 30.0%
! TCTCTTGTTTCAAATTGTAG+TGG - chr4_1:83963120-83963139 Msa0579290:intron 30.0%
ATTAATATCCTAATCAGCTC+AGG + chr4_1:83963473-83963492 None:intergenic 30.0%
AAGCTTGGGATATTACTAAA+AGG - chr4_1:83963519-83963538 Msa0579290:intron 30.0%
TTTATTATTTCCACATGTCG+AGG + chr4_1:83963768-83963787 None:intergenic 30.0%
AATAAAAAGGATAGATGAGG+AGG - chr4_1:83963782-83963801 Msa0579290:intron 30.0%
ATTTCATATGTCCATCTACA+CGG - chr4_1:83963849-83963868 Msa0579290:CDS 30.0%
! GAAGAAAATGATGATGATGA+CGG - chr4_1:83964145-83964164 Msa0579290:CDS 30.0%
!!! GTTTTATTCTGGAATTTCTC+AGG + chr4_1:83964514-83964533 None:intergenic 30.0%
! GTTATGATTTTACTAAGGTC+GGG + chr4_1:83964577-83964596 None:intergenic 30.0%
! GGTTATGATTTTACTAAGGT+CGG + chr4_1:83964578-83964597 None:intergenic 30.0%
GCAAGGTAAATGAATTTAAC+TGG - chr4_1:83964653-83964672 Msa0579290:intron 30.0%
AAAATGGTAGCAAGCATTAT+AGG - chr4_1:83964778-83964797 Msa0579290:CDS 30.0%
CTAATGTTCATTCCTTGAAA+AGG + chr4_1:83965127-83965146 None:intergenic 30.0%
!! ATGTATGCGTAAGTTGTTTT+AGG + chr4_1:83965165-83965184 None:intergenic 30.0%
! TCATTGTTTAAGTTCTACAC+AGG + chr4_1:83965234-83965253 None:intergenic 30.0%
TGTGTAGAACTTAAACAATG+AGG - chr4_1:83965233-83965252 Msa0579290:intron 30.0%
GATATGACAGCTTAAAATAG+CGG - chr4_1:83965568-83965587 Msa0579290:intron 30.0%
!!! AATAGCGGATTTTTGTCTTT+TGG - chr4_1:83965583-83965602 Msa0579290:intron 30.0%
ATGGCATAGAAATTGAACTA+GGG + chr4_1:83965715-83965734 None:intergenic 30.0%
TATGGCATAGAAATTGAACT+AGG + chr4_1:83965716-83965735 None:intergenic 30.0%
!!! TTTTTTTTCCACAAACACAC+AGG - chr4_1:83965781-83965800 Msa0579290:CDS 30.0%
AGTGAGAAAAATCACATAAC+TGG - chr4_1:83965818-83965837 Msa0579290:CDS 30.0%
! AGCTGTTATTTATTGGATCT+TGG + chr4_1:83965879-83965898 None:intergenic 30.0%
AACAGCCATTAAAATTCCAA+TGG - chr4_1:83965942-83965961 Msa0579290:intron 30.0%
! ACATGCCATTGGAATTTTAA+TGG + chr4_1:83965950-83965969 None:intergenic 30.0%
AGCGTATTCATGAATACAAA+CGG - chr4_1:83966026-83966045 Msa0579290:intron 30.0%
AATGAAAGAATTGAATGCTG+AGG - chr4_1:83966090-83966109 Msa0579290:intron 30.0%
GAAAACAATTGTTTGTTCCT+CGG - chr4_1:83966116-83966135 Msa0579290:intron 30.0%
AAAACAATTGTTTGTTCCTC+GGG - chr4_1:83966117-83966136 Msa0579290:intron 30.0%
! GATGAATTTTACAATCCTCT+TGG + chr4_1:83966185-83966204 None:intergenic 30.0%
GTAAAATTCATCACAGATGT+AGG - chr4_1:83966193-83966212 Msa0579290:intron 30.0%
GGTGATAGATAAACACATTA+TGG - chr4_1:83966275-83966294 Msa0579290:intron 30.0%
TTATGGTCGTTCCAAAAATT+TGG - chr4_1:83966292-83966311 Msa0579290:intron 30.0%
! CTTTATCTGAAGTAGAACTT+TGG - chr4_1:83966354-83966373 Msa0579290:intron 30.0%
!!! ATTTTATTTTTCTGCAGCTG+AGG + chr4_1:83966494-83966513 None:intergenic 30.0%
TTAGCTGAAAAGCTGATAAA+GGG - chr4_1:83966523-83966542 Msa0579290:intron 30.0%
TTATCTATACCTAATGTGCT+GGG + chr4_1:83966678-83966697 None:intergenic 30.0%
TTTATCTATACCTAATGTGC+TGG + chr4_1:83966679-83966698 None:intergenic 30.0%
GTTGAAATAAGAGAAGAAGT+TGG - chr4_1:83966873-83966892 Msa0579290:intron 30.0%
! GAAGACAACTTCTTTCTTTT+TGG - chr4_1:83966897-83966916 Msa0579290:intron 30.0%
TGGACTTAACAATGTCTTAA+AGG + chr4_1:83967116-83967135 None:intergenic 30.0%
! TATGTTAGAAGTGGTGTTTT+TGG - chr4_1:83967233-83967252 Msa0579290:intron 30.0%
AAGTAAGTAACATCAAGTCA+TGG - chr4_1:83967396-83967415 Msa0579290:intron 30.0%
! TCTTTTTGGATGAATTTCTC+AGG - chr4_1:83967494-83967513 Msa0579290:intron 30.0%
ATGAATATGCCAGAGATATA+TGG - chr4_1:83967796-83967815 Msa0579290:CDS 30.0%
TCGATGAACATAATTCTACA+AGG + chr4_1:83968011-83968030 None:intergenic 30.0%
! ATGGTCTAATTTTCCAAATG+AGG - chr4_1:83968058-83968077 Msa0579290:five_prime_UTR 30.0%
AGTTTGAATAATCCATCCAT+GGG + chr4_1:83968110-83968129 None:intergenic 30.0%
TAGTTTGAATAATCCATCCA+TGG + chr4_1:83968111-83968130 None:intergenic 30.0%
! GGTAACTACATGCTGTATTT+TGG - chr4_1:83959990-83960009 Msa0579290:three_prime_UTR 35.0%
! GATTTGGAATGGGAATGTAA+AGG + chr4_1:83960265-83960284 None:intergenic 35.0%
CCCATTCCAAATCAAACATT+TGG - chr4_1:83960272-83960291 Msa0579290:three_prime_UTR 35.0%
!! GCCAAATGTTTGATTTGGAA+TGG + chr4_1:83960276-83960295 None:intergenic 35.0%
ATCAAACTGAAACTCTTGCA+AGG + chr4_1:83960552-83960571 None:intergenic 35.0%
TTGCAAGAGTTTCAGTTTGA+TGG - chr4_1:83960551-83960570 Msa0579290:intron 35.0%
! CAGTTTGATGGAAATTTTGC+TGG - chr4_1:83960563-83960582 Msa0579290:intron 35.0%
TTGGAAGGTTCTCAAAAGTA+AGG - chr4_1:83960611-83960630 Msa0579290:intron 35.0%
TCAATGCACATTATAGACGT+TGG - chr4_1:83960679-83960698 Msa0579290:CDS 35.0%
TTTCTTAAGGTGTGCAGTAT+AGG - chr4_1:83960719-83960738 Msa0579290:intron 35.0%
ATCGTAACTTATATTGCCAC+AGG - chr4_1:83960743-83960762 Msa0579290:intron 35.0%
TAACTTATATTGCCACAGGA+AGG - chr4_1:83960747-83960766 Msa0579290:intron 35.0%
GGATTAATGGAATCTAGTTG+AGG - chr4_1:83960800-83960819 Msa0579290:intron 35.0%
TTCCTCCAACAAACTTCAAA+GGG + chr4_1:83960896-83960915 None:intergenic 35.0%
TTTCCTCCAACAAACTTCAA+AGG + chr4_1:83960897-83960916 None:intergenic 35.0%
CAAGTTTCCTTGAATCGTAA+TGG - chr4_1:83961118-83961137 Msa0579290:intron 35.0%
TGCAACGAATTCATTTGAAG+TGG + chr4_1:83961430-83961449 None:intergenic 35.0%
TTTCTCAGGAGAAAAAGATG+TGG + chr4_1:83961499-83961518 None:intergenic 35.0%
GCAAGCTTATTACATGTCTA+TGG - chr4_1:83961623-83961642 Msa0579290:intron 35.0%
GAGTATCTACAGGTTCATAT+TGG - chr4_1:83961645-83961664 Msa0579290:intron 35.0%
TGGGTTTCCTTTATGAAACA+CGG - chr4_1:83961665-83961684 Msa0579290:intron 35.0%
AAATGACCCGTGTTTCATAA+AGG + chr4_1:83961675-83961694 None:intergenic 35.0%
!! AGGGCATTGTTAAATGCAAT+TGG - chr4_1:83961751-83961770 Msa0579290:intron 35.0%
! GGGCATTGTTAAATGCAATT+GGG - chr4_1:83961752-83961771 Msa0579290:intron 35.0%
ATTGGGAATTTACAACTCTC+AGG - chr4_1:83961769-83961788 Msa0579290:intron 35.0%
GAAACTGGGTTACAATTTAG+AGG - chr4_1:83961813-83961832 Msa0579290:intron 35.0%
CAACAAAGGAGAACAATAGT+AGG + chr4_1:83961860-83961879 None:intergenic 35.0%
!! ATTGTTCTCCTTTGTTGTTG+CGG - chr4_1:83961863-83961882 Msa0579290:intron 35.0%
TGTTTATCAAATAGTCCTCC+TGG - chr4_1:83961927-83961946 Msa0579290:intron 35.0%
! CATGTAACAGTAAGTTGAAC+TGG - chr4_1:83961953-83961972 Msa0579290:intron 35.0%
GTAAAATGTCTTCATTCGTG+TGG - chr4_1:83962199-83962218 Msa0579290:intron 35.0%
GTGTGGAAACATACTAATGA+AGG - chr4_1:83962216-83962235 Msa0579290:intron 35.0%
CAAACTCACATACAATTCAC+AGG - chr4_1:83962335-83962354 Msa0579290:intron 35.0%
TATGGACTTAGATACAGGTA+TGG - chr4_1:83962450-83962469 Msa0579290:intron 35.0%
AAACAACGTATAACGAAGGA+CGG - chr4_1:83962480-83962499 Msa0579290:intron 35.0%
CTGACGTGTCTATTTATAGA+TGG - chr4_1:83962686-83962705 Msa0579290:intron 35.0%
ATTTATAGATGGGAAATCCC+TGG - chr4_1:83962697-83962716 Msa0579290:intron 35.0%
TTTATAGATGGGAAATCCCT+GGG - chr4_1:83962698-83962717 Msa0579290:intron 35.0%
ACTTCTCCATAGAATCTAAC+TGG + chr4_1:83962750-83962769 None:intergenic 35.0%
!!! CTAGTTTTGTATCCAGGTAT+TGG + chr4_1:83962843-83962862 None:intergenic 35.0%
GATTTGAAGGCTTTCAATAC+TGG - chr4_1:83962915-83962934 Msa0579290:intron 35.0%
TTTGAAGGCTTTCAATACTG+GGG - chr4_1:83962917-83962936 Msa0579290:intron 35.0%
ATACATTCTAAGCTCAGTAG+TGG + chr4_1:83963075-83963094 None:intergenic 35.0%
ATCTGTTACATTCTATACCC+TGG - chr4_1:83963269-83963288 Msa0579290:CDS 35.0%
TCTGTTACATTCTATACCCT+GGG - chr4_1:83963270-83963289 Msa0579290:CDS 35.0%
TGAAAAGAGATCAGGAATGA+CGG - chr4_1:83963379-83963398 Msa0579290:intron 35.0%
ATCAGGAATGACGGTAAATT+GGG - chr4_1:83963388-83963407 Msa0579290:intron 35.0%
ATTTGTACCACCACTTTATC+TGG + chr4_1:83963422-83963441 None:intergenic 35.0%
TAATGGCTCTTCTGTTAGAA+CGG - chr4_1:83963668-83963687 Msa0579290:CDS 35.0%
CAACAACTTCATGTGTAAAC+TGG + chr4_1:83963937-83963956 None:intergenic 35.0%
ATGAAGTTGTTGCTGAGTAT+GGG - chr4_1:83963945-83963964 Msa0579290:CDS 35.0%
! ACTAGAGAATATTGAGTTGC+CGG - chr4_1:83964015-83964034 Msa0579290:CDS 35.0%
AATTTCCTCAACAGGATCAT+CGG + chr4_1:83964077-83964096 None:intergenic 35.0%
TCAACATCAATTTCCTCAAC+AGG + chr4_1:83964085-83964104 None:intergenic 35.0%
GAAGAAGAAGAAGATGAAGT+GGG - chr4_1:83964169-83964188 Msa0579290:CDS 35.0%
AAGAAGAAGAAGATGAAGTG+GGG - chr4_1:83964170-83964189 Msa0579290:CDS 35.0%
AAAAACCACCAACAACACAT+AGG + chr4_1:83964303-83964322 None:intergenic 35.0%
TCACAGTGAGATTGTAAAAG+AGG - chr4_1:83964345-83964364 Msa0579290:intron 35.0%
!! TGTCATTGATTTGACAGTTG+TGG - chr4_1:83964488-83964507 Msa0579290:CDS 35.0%
!!! TCACCCCATTTGTTTTATTC+TGG + chr4_1:83964525-83964544 None:intergenic 35.0%
GGTAACAGATCTTGAGAAAT+TGG - chr4_1:83964621-83964640 Msa0579290:intron 35.0%
CAGAGTGGATAGAATCAAAA+AGG - chr4_1:83964914-83964933 Msa0579290:CDS 35.0%
TGTACATCAAACATTGCATC+TGG + chr4_1:83964997-83965016 None:intergenic 35.0%
AGATGCAATGTTTGATGTAC+AGG - chr4_1:83964996-83965015 Msa0579290:intron 35.0%
! GAAGGAAATGCAGTTTTTGA+TGG + chr4_1:83965033-83965052 None:intergenic 35.0%
CATCTGAATAATAGCAATGC+TGG - chr4_1:83965070-83965089 Msa0579290:intron 35.0%
TGAGACCGTATAATGTTACA+AGG + chr4_1:83965292-83965311 None:intergenic 35.0%
! ACTATTTGCTGCATAGAAGA+AGG - chr4_1:83965311-83965330 Msa0579290:CDS 35.0%
! CTATTTGCTGCATAGAAGAA+GGG - chr4_1:83965312-83965331 Msa0579290:CDS 35.0%
!!! GCGATGTTATTTTACAGCAT+AGG + chr4_1:83965410-83965429 None:intergenic 35.0%
TATGCCACTACAATCTTTCA+TGG + chr4_1:83965486-83965505 None:intergenic 35.0%
CCAATGTTATTGATGTCAGA+TGG + chr4_1:83965619-83965638 None:intergenic 35.0%
CCATCTGACATCAATAACAT+TGG - chr4_1:83965616-83965635 Msa0579290:intron 35.0%
AATAGTTACCTGTGTGTTTG+TGG + chr4_1:83965792-83965811 None:intergenic 35.0%
AGACTAACATGAAATCGTAC+TGG - chr4_1:83965910-83965929 Msa0579290:intron 35.0%
GACTAACATGAAATCGTACT+GGG - chr4_1:83965911-83965930 Msa0579290:intron 35.0%
ACTAACATGAAATCGTACTG+GGG - chr4_1:83965912-83965931 Msa0579290:intron 35.0%
! TGTTTTACACCCTCAATTCA+TGG - chr4_1:83965970-83965989 Msa0579290:intron 35.0%
TTCAAAAGATCTCCAATCTC+TGG + chr4_1:83966238-83966257 None:intergenic 35.0%
! AGAGATTGGAGATCTTTTGA+AGG - chr4_1:83966237-83966256 Msa0579290:intron 35.0%
!! TTGAAGGTATCAGTCAAACT+TGG - chr4_1:83966253-83966272 Msa0579290:intron 35.0%
!! TGAAGGTATCAGTCAAACTT+GGG - chr4_1:83966254-83966273 Msa0579290:intron 35.0%
TCTTCATACATAACAGCATG+TGG - chr4_1:83966468-83966487 Msa0579290:intron 35.0%
GTTAGCTGAAAAGCTGATAA+AGG - chr4_1:83966522-83966541 Msa0579290:intron 35.0%
CTTAGTCATAAAACAGATCC+TGG - chr4_1:83966569-83966588 Msa0579290:CDS 35.0%
GCAACACTAACATTGTAATC+AGG + chr4_1:83966626-83966645 None:intergenic 35.0%
ATGAATGGATGTGTGCAAAT+TGG - chr4_1:83966831-83966850 Msa0579290:intron 35.0%
TTAAGGAAAGAAAGAGCAGA+AGG - chr4_1:83966945-83966964 Msa0579290:intron 35.0%
!! CACTTTGCTTTTCATATCAG+TGG - chr4_1:83967041-83967060 Msa0579290:intron 35.0%
! GATACATAATTCTGTTGGCT+TGG + chr4_1:83967136-83967155 None:intergenic 35.0%
CCTTTACTTCTTCAAACCTT+GGG + chr4_1:83967211-83967230 None:intergenic 35.0%
! GTAAAGGCATATGTTAGAAG+TGG - chr4_1:83967224-83967243 Msa0579290:intron 35.0%
TACAACTACGACGAATTGAT+GGG - chr4_1:83967260-83967279 Msa0579290:intron 35.0%
! AATTGATGGGATCTTTGGAA+GGG - chr4_1:83967273-83967292 Msa0579290:intron 35.0%
CAACAAGGAAATAATCAGCA+CGG + chr4_1:83967313-83967332 None:intergenic 35.0%
TGATTATTTCCTTGTTGGCA+AGG - chr4_1:83967316-83967335 Msa0579290:intron 35.0%
! AAGCTTTCCGCAATTCTTTT+TGG - chr4_1:83967480-83967499 Msa0579290:intron 35.0%
GCAAGTTATTATACGAACCA+TGG - chr4_1:83967650-83967669 Msa0579290:intron 35.0%
CATAAGCAATACATATGCCA+TGG + chr4_1:83967670-83967689 None:intergenic 35.0%
AAGAACTGATTGATGTGTGT+TGG - chr4_1:83967701-83967720 Msa0579290:intron 35.0%
TGGCATATTCATGAATAGTC+CGG + chr4_1:83967788-83967807 None:intergenic 35.0%
CTCAATTCTCCATATATCTC+TGG + chr4_1:83967808-83967827 None:intergenic 35.0%
!! ACTTTTCAAGGCAATACAAC+TGG + chr4_1:83967831-83967850 None:intergenic 35.0%
! GTTTTACATGCTTTGGTCTA+AGG - chr4_1:83967849-83967868 Msa0579290:CDS 35.0%
! TTTGTGAACATTCTGAGAGA+AGG + chr4_1:83967890-83967909 None:intergenic 35.0%
TCTCTCAGAATGTTCACAAA+AGG - chr4_1:83967890-83967909 Msa0579290:CDS 35.0%
AAGGATAACATAAGCTCTAC+TGG + chr4_1:83967992-83968011 None:intergenic 35.0%
GAAAGAAGAACGAGTGAAAG+AGG + chr4_1:83960102-83960121 None:intergenic 40.0%
TCGCTGCCAAATGTTTGATT+TGG + chr4_1:83960281-83960300 None:intergenic 40.0%
GAGCTTTCTAATTGCTCTTC+TGG + chr4_1:83960347-83960366 None:intergenic 40.0%
GAACTGAAAGAACGACTCAT+TGG - chr4_1:83960400-83960419 Msa0579290:CDS 40.0%
AAAGAACGACTCATTGGACA+AGG - chr4_1:83960406-83960425 Msa0579290:CDS 40.0%
AGGTTCTCAAAAGTAAGGAG+TGG - chr4_1:83960616-83960635 Msa0579290:intron 40.0%
GGTTCTCAAAAGTAAGGAGT+GGG - chr4_1:83960617-83960636 Msa0579290:intron 40.0%
ATTAAGTGACATCCTTCCTG+TGG + chr4_1:83960762-83960781 None:intergenic 40.0%
!! ATCCCTTTGAAGTTTGTTGG+AGG - chr4_1:83960891-83960910 Msa0579290:CDS 40.0%
CCTGCAAGTGTTAACCAATA+AGG + chr4_1:83961405-83961424 None:intergenic 40.0%
! CCTTATTGGTTAACACTTGC+AGG - chr4_1:83961402-83961421 Msa0579290:CDS 40.0%
TTACTGGGCTCAAATTTCTC+AGG + chr4_1:83961513-83961532 None:intergenic 40.0%
TGAGAAATTTGAGCCCAGTA+AGG - chr4_1:83961512-83961531 Msa0579290:intron 40.0%
GTTGCAAAGTAAGCCTTACT+GGG + chr4_1:83961528-83961547 None:intergenic 40.0%
AGTTGCAAAGTAAGCCTTAC+TGG + chr4_1:83961529-83961548 None:intergenic 40.0%
! CATGTCTATGGAGTATCTAC+AGG - chr4_1:83961635-83961654 Msa0579290:intron 40.0%
GGGTTTCCTTTATGAAACAC+GGG - chr4_1:83961666-83961685 Msa0579290:intron 40.0%
! TTTTCCCAATTGTGAAGGGT+AGG - chr4_1:83961731-83961750 Msa0579290:intron 40.0%
TTTCCCAATTGTGAAGGGTA+GGG - chr4_1:83961732-83961751 Msa0579290:intron 40.0%
GGGTTACAATTTAGAGGATG+TGG - chr4_1:83961819-83961838 Msa0579290:intron 40.0%
TTTAGAGGATGTGGCTAATC+AGG - chr4_1:83961828-83961847 Msa0579290:intron 40.0%
ACTTACTGTTACATGCTACC+AGG + chr4_1:83961948-83961967 None:intergenic 40.0%
TTCTTGCTTTCTAGACTCCT+TGG - chr4_1:83962401-83962420 Msa0579290:intron 40.0%
AACACTGAATTACCCTGCAT+GGG - chr4_1:83962425-83962444 Msa0579290:intron 40.0%
CATATTATTGCTGCCTATGC+AGG - chr4_1:83962582-83962601 Msa0579290:intron 40.0%
TCGTTTCTCTGAATTTCCCA+GGG + chr4_1:83962717-83962736 None:intergenic 40.0%
ATCGTTTCTCTGAATTTCCC+AGG + chr4_1:83962718-83962737 None:intergenic 40.0%
!!! GACTGGAGGAGAAAGTATTT+TGG - chr4_1:83962800-83962819 Msa0579290:intron 40.0%
GCTTATGATGTTCCAATACC+TGG - chr4_1:83962828-83962847 Msa0579290:intron 40.0%
!!! GTGGTTCTAGTTTTGTATCC+AGG + chr4_1:83962849-83962868 None:intergenic 40.0%
TGTCATGAAGAATGCAGAGA+AGG - chr4_1:83962959-83962978 Msa0579290:intron 40.0%
AAGAATGCAGAGAAGGTTTG+TGG - chr4_1:83962966-83962985 Msa0579290:intron 40.0%
GTAAGGACCACAAAGAAACA+AGG + chr4_1:83962995-83963014 None:intergenic 40.0%
TGAACTTAGATGCAGGTGTA+AGG + chr4_1:83963012-83963031 None:intergenic 40.0%
AAGACACTGAACTTAGATGC+AGG + chr4_1:83963019-83963038 None:intergenic 40.0%
CTGTTACATTCTATACCCTG+GGG - chr4_1:83963271-83963290 Msa0579290:CDS 40.0%
!! CTTCTATTGATTCATCCCCA+GGG + chr4_1:83963289-83963308 None:intergenic 40.0%
GATCAGGAATGACGGTAAAT+TGG - chr4_1:83963387-83963406 Msa0579290:intron 40.0%
TACCACCACTTTATCTGGAA+GGG + chr4_1:83963417-83963436 None:intergenic 40.0%
TAGATGTGAAGGGTTTAAGC+TGG - chr4_1:83963492-83963511 Msa0579290:intron 40.0%
AGATGTGAAGGGTTTAAGCT+GGG - chr4_1:83963493-83963512 Msa0579290:intron 40.0%
TTTAAGCTGGGAGAAAGCTT+GGG - chr4_1:83963505-83963524 Msa0579290:intron 40.0%
AAAGGATAGATGAGGAGGTA+AGG - chr4_1:83963787-83963806 Msa0579290:intron 40.0%
CATAAAGAAGACCGTGTAGA+TGG + chr4_1:83963863-83963882 None:intergenic 40.0%
CATGAAGTTGTTGCTGAGTA+TGG - chr4_1:83963944-83963963 Msa0579290:CDS 40.0%
! GAATATTGAGTTGCCGGATT+CGG - chr4_1:83964021-83964040 Msa0579290:CDS 40.0%
CGAAGAAGAAGAAGATGAAG+TGG - chr4_1:83964168-83964187 Msa0579290:CDS 40.0%
ATGGCTAACCTATGTGTTGT+TGG - chr4_1:83964292-83964311 Msa0579290:intron 40.0%
!!! GTTGGTGGTTTTTCTGTGAA+CGG - chr4_1:83964310-83964329 Msa0579290:intron 40.0%
TAAGGTCGGGATTACAGAAA+CGG + chr4_1:83964564-83964583 None:intergenic 40.0%
GTCTTCTGTTCCAATCCATT+TGG + chr4_1:83964599-83964618 None:intergenic 40.0%
!! AATGGATTGGAACAGAAGAC+TGG - chr4_1:83964599-83964618 Msa0579290:intron 40.0%
!! ATGGATTGGAACAGAAGACT+GGG - chr4_1:83964600-83964619 Msa0579290:intron 40.0%
TATGCAACAACTTCCACAGT+TGG - chr4_1:83964715-83964734 Msa0579290:CDS 40.0%
CTACCAGTTTGCAGATAATG+AGG - chr4_1:83964882-83964901 Msa0579290:CDS 40.0%
GATCCTCATTATCTGCAAAC+TGG + chr4_1:83964888-83964907 None:intergenic 40.0%
! GGAAATGCAGTTTTTGATGG+CGG + chr4_1:83965030-83965049 None:intergenic 40.0%
GCTAACTAAACACGAGAAGA+AGG + chr4_1:83965051-83965070 None:intergenic 40.0%
TGCTGGAAATGTTTCATGTC+TGG - chr4_1:83965087-83965106 Msa0579290:intron 40.0%
ATAACATCGCCCCTTTATGA+TGG - chr4_1:83965420-83965439 Msa0579290:CDS 40.0%
TCAGCCATGAAAGATTGTAG+TGG - chr4_1:83965479-83965498 Msa0579290:CDS 40.0%
CATCTTTCACAAATTGGCCA+TGG + chr4_1:83965524-83965543 None:intergenic 40.0%
CATGGCCAATTTGTGAAAGA+TGG - chr4_1:83965522-83965541 Msa0579290:intron 40.0%
CGTTGCCATCTTTCACAAAT+TGG + chr4_1:83965530-83965549 None:intergenic 40.0%
ATATCCGCCATAAAATGCCA+TGG + chr4_1:83965553-83965572 None:intergenic 40.0%
! GGATTTTTGTCTTTTGGCCA+AGG - chr4_1:83965589-83965608 Msa0579290:intron 40.0%
TGAAATCGTACTGGGGAAAA+TGG - chr4_1:83965919-83965938 Msa0579290:intron 40.0%
GGTGTAAAACAACATGCCAT+TGG + chr4_1:83965961-83965980 None:intergenic 40.0%
ACGGCAGTTACTGAATATCA+TGG - chr4_1:83966045-83966064 Msa0579290:intron 40.0%
CGGCAGTTACTGAATATCAT+GGG - chr4_1:83966046-83966065 Msa0579290:intron 40.0%
CAACATATGTTCAAGCCAAG+AGG - chr4_1:83966167-83966186 Msa0579290:intron 40.0%
GTTAATCACGATCCAGAGAT+TGG - chr4_1:83966223-83966242 Msa0579290:intron 40.0%
! GGCGTAAGCAACCAAATTTT+TGG + chr4_1:83966306-83966325 None:intergenic 40.0%
GTTGCTGAAATGCTAATTCC+TGG - chr4_1:83966641-83966660 Msa0579290:CDS 40.0%
TTCTGTGTGTTTAGTACAGC+TGG - chr4_1:83966771-83966790 Msa0579290:CDS 40.0%
TCTGTGTGTTTAGTACAGCT+GGG - chr4_1:83966772-83966791 Msa0579290:intron 40.0%
! TTTCATGTTGCTTGTTCCAC+TGG + chr4_1:83966805-83966824 None:intergenic 40.0%
TGCAAATTGGAACTCTCGAT+GGG - chr4_1:83966844-83966863 Msa0579290:intron 40.0%
CTGAAGAAATTGCAGGGTTA+AGG - chr4_1:83966928-83966947 Msa0579290:intron 40.0%
GAAAGAAAGAGCAGAAGGAA+AGG - chr4_1:83966950-83966969 Msa0579290:intron 40.0%
CCCAAGGTTTGAAGAAGTAA+AGG - chr4_1:83967208-83967227 Msa0579290:intron 40.0%
GCCTTTACTTCTTCAAACCT+TGG + chr4_1:83967212-83967231 None:intergenic 40.0%
CATCAATTCGTCGTAGTTGT+AGG + chr4_1:83967261-83967280 None:intergenic 40.0%
CTACAACTACGACGAATTGA+TGG - chr4_1:83967259-83967278 Msa0579290:intron 40.0%
GAATTGATGGGATCTTTGGA+AGG - chr4_1:83967272-83967291 Msa0579290:intron 40.0%
!! CGTGCTGATTATTTCCTTGT+TGG - chr4_1:83967311-83967330 Msa0579290:intron 40.0%
AGACAACTTGTGTTCAACAC+AGG + chr4_1:83967535-83967554 None:intergenic 40.0%
TGAACACAAGTTGTCTCAAC+TGG - chr4_1:83967539-83967558 Msa0579290:intron 40.0%
ATGTCAATCTTGAACACAGC+TGG - chr4_1:83967741-83967760 Msa0579290:intron 40.0%
CGTATAAATTCAGCAGTGAC+CGG - chr4_1:83967766-83967785 Msa0579290:intron 40.0%
CACAAAAGGCTTGAAAACTG+AGG - chr4_1:83967904-83967923 Msa0579290:CDS 40.0%
AAAGGCTTGAAAACTGAGGA+AGG - chr4_1:83967908-83967927 Msa0579290:CDS 40.0%
TCCAAATGAGGATGCTGATA+AGG - chr4_1:83968070-83968089 Msa0579290:five_prime_UTR 40.0%
ACCTTATCAGCATCCTCATT+TGG + chr4_1:83968074-83968093 None:intergenic 40.0%
GGTTATATTGTTCCATCCCA+TGG - chr4_1:83968091-83968110 Msa0579290:five_prime_UTR 40.0%
ATATTGTTCCATCCCATGGA+TGG - chr4_1:83968095-83968114 Msa0579290:five_prime_UTR 40.0%
TGAATAATCCATCCATGGGA+TGG + chr4_1:83968106-83968125 None:intergenic 40.0%
TACCATTCTCAACAACCTGC+AGG - chr4_1:83960227-83960246 Msa0579290:three_prime_UTR 45.0%
GGCAGCGACAAAACAACATT+TGG - chr4_1:83960293-83960312 Msa0579290:three_prime_UTR 45.0%
AAAGTAAGGAGTGGGAACCA+TGG - chr4_1:83960625-83960644 Msa0579290:intron 45.0%
ATGCCCTACCCTTCACAATT+GGG + chr4_1:83961738-83961757 None:intergenic 45.0%
AATGCCCTACCCTTCACAAT+TGG + chr4_1:83961739-83961758 None:intergenic 45.0%
!! CTCCTTTGTTGTTGCGGTTT+CGG - chr4_1:83961869-83961888 Msa0579290:intron 45.0%
TACTGTTACATGCTACCAGG+AGG + chr4_1:83961945-83961964 None:intergenic 45.0%
CTAGAAAGCAAGAAGCAAGC+CGG + chr4_1:83962395-83962414 None:intergenic 45.0%
AGGGTAATTCAGTGTTGCCA+AGG + chr4_1:83962421-83962440 None:intergenic 45.0%
CAACACTGAATTACCCTGCA+TGG - chr4_1:83962424-83962443 Msa0579290:intron 45.0%
ACACTGAATTACCCTGCATG+GGG - chr4_1:83962426-83962445 Msa0579290:intron 45.0%
AATTACCCTGCATGGGGATA+TGG - chr4_1:83962432-83962451 Msa0579290:intron 45.0%
TAAGTCCATATCCCCATGCA+GGG + chr4_1:83962440-83962459 None:intergenic 45.0%
GGGGATATGGACTTAGATAC+AGG - chr4_1:83962445-83962464 Msa0579290:intron 45.0%
AGGAGGAAGTTGCTGAAAAC+TGG - chr4_1:83962505-83962524 Msa0579290:intron 45.0%
!! AGTTGCTGAAAACTGGCTTG+AGG - chr4_1:83962512-83962531 Msa0579290:intron 45.0%
!! GGCTTGAGGTACTGCTTATA+TGG - chr4_1:83962526-83962545 Msa0579290:intron 45.0%
! GAAGTTATTTCAGGGCCAGA+TGG - chr4_1:83962765-83962784 Msa0579290:intron 45.0%
CCACAATCGCAAGTTTATGG+TGG + chr4_1:83962868-83962887 None:intergenic 45.0%
CCACCATAAACTTGCGATTG+TGG - chr4_1:83962865-83962884 Msa0579290:intron 45.0%
GGACCACAATCGCAAGTTTA+TGG + chr4_1:83962871-83962890 None:intergenic 45.0%
CTTCATGACAGCGTATGCTT+TGG + chr4_1:83962949-83962968 None:intergenic 45.0%
!! GTGGAAGCCTTGTTTCTTTG+TGG - chr4_1:83962985-83963004 Msa0579290:intron 45.0%
!! CCTTCTATTGATTCATCCCC+AGG + chr4_1:83963290-83963309 None:intergenic 45.0%
CCTGGGGATGAATCAATAGA+AGG - chr4_1:83963287-83963306 Msa0579290:CDS 45.0%
TGCAATGATATCCTGGAGAG+AGG + chr4_1:83963354-83963373 None:intergenic 45.0%
CAAAGCGTGCAATGATATCC+TGG + chr4_1:83963361-83963380 None:intergenic 45.0%
!! GCACGCTTTGAAAAGAGATC+AGG - chr4_1:83963371-83963390 Msa0579290:intron 45.0%
GTACCACCACTTTATCTGGA+AGG + chr4_1:83963418-83963437 None:intergenic 45.0%
TCTGCATTCCTGAGCTGATT+AGG - chr4_1:83963462-83963481 Msa0579290:intron 45.0%
GTTTAAGCTGGGAGAAAGCT+TGG - chr4_1:83963504-83963523 Msa0579290:intron 45.0%
AAACCACACAGTTCTACCAG+AGG - chr4_1:83963701-83963720 Msa0579290:intron 45.0%
!! TACCAGAGGCACTAGAGAAA+TGG - chr4_1:83963715-83963734 Msa0579290:intron 45.0%
ATGGAGTTTGACTCTTCTGC+AGG - chr4_1:83963734-83963753 Msa0579290:intron 45.0%
GGATTTACTTCCTCGACATG+TGG - chr4_1:83963755-83963774 Msa0579290:intron 45.0%
ATAAACTCGACCACCGAATC+CGG + chr4_1:83964037-83964056 None:intergenic 45.0%
GACAAACGAGAAGCAGAAGA+TGG - chr4_1:83964196-83964215 Msa0579290:CDS 45.0%
TGATCCAAACCTGCCAATGA+TGG - chr4_1:83964264-83964283 Msa0579290:intron 45.0%
TTAGCCATGCGAACCATCAT+TGG + chr4_1:83964280-83964299 None:intergenic 45.0%
! GCTAACCTATGTGTTGTTGG+TGG - chr4_1:83964295-83964314 Msa0579290:intron 45.0%
CAGAAACGGATCCATCTTCT+AGG + chr4_1:83964550-83964569 None:intergenic 45.0%
GAAATTGGCTGTACTTCGCA+AGG - chr4_1:83964636-83964655 Msa0579290:intron 45.0%
ATGTACTCACTAGCCAACTG+TGG + chr4_1:83964731-83964750 None:intergenic 45.0%
TGTGAAGTGACCTTCGACTA+AGG + chr4_1:83964809-83964828 None:intergenic 45.0%
ATGAGGATCTGCAATCAGAG+TGG - chr4_1:83964899-83964918 Msa0579290:CDS 45.0%
! AACGCCATGGCATTTTATGG+CGG - chr4_1:83965546-83965565 Msa0579290:intron 45.0%
! GTTCCTCGGGTTTGTGTTTT+TGG - chr4_1:83966130-83966149 Msa0579290:intron 45.0%
!!! CTCGGGTTTGTGTTTTTGGA+GGG - chr4_1:83966134-83966153 Msa0579290:intron 45.0%
TAACTACTGGGATTTGTCCC+TGG + chr4_1:83966393-83966412 None:intergenic 45.0%
TGCAAGTTAAGACACGAACC+AGG + chr4_1:83966590-83966609 None:intergenic 45.0%
!! TGGTTCGTGTCTTAACTTGC+AGG - chr4_1:83966589-83966608 Msa0579290:CDS 45.0%
GTGAATTGTCCCAGCACATT+AGG - chr4_1:83966666-83966685 Msa0579290:CDS 45.0%
TGTGTTTAGTACAGCTGGGA+TGG - chr4_1:83966776-83966795 Msa0579290:intron 45.0%
GTGCAAATTGGAACTCTCGA+TGG - chr4_1:83966843-83966862 Msa0579290:intron 45.0%
GCAAATTGGAACTCTCGATG+GGG - chr4_1:83966845-83966864 Msa0579290:intron 45.0%
CACGAGCTGAAGAAATTGCA+GGG - chr4_1:83966922-83966941 Msa0579290:intron 45.0%
ACTTCTTCAAACCTTGGGTC+TGG + chr4_1:83967206-83967225 None:intergenic 45.0%
CGACGAATTGATGGGATCTT+TGG - chr4_1:83967268-83967287 Msa0579290:intron 45.0%
! GGATCTTTGGAAGGGAATGA+AGG - chr4_1:83967281-83967300 Msa0579290:intron 45.0%
TTGGAAGGGAATGAAGGCTA+TGG - chr4_1:83967287-83967306 Msa0579290:intron 45.0%
ATGCCTTGTCAACTTCCTCT+TGG + chr4_1:83967364-83967383 None:intergenic 45.0%
! GATGTGTGTTGGTGCAGAAA+TGG - chr4_1:83967712-83967731 Msa0579290:intron 45.0%
TGCCTGCAGGTTGTTGAGAA+TGG + chr4_1:83960232-83960251 None:intergenic 50.0%
CATTGGACAAGGTTGCTTGC+TGG - chr4_1:83960417-83960436 Msa0579290:CDS 50.0%
ACTCTCAGGTCCTTATGCTG+AGG - chr4_1:83961783-83961802 Msa0579290:intron 50.0%
TTCCTCAGAGCCTCAGCATA+AGG + chr4_1:83961796-83961815 None:intergenic 50.0%
AGCCGAAACCGCAACAACAA+AGG + chr4_1:83961874-83961893 None:intergenic 50.0%
GCCTAATCCTCCATTCCCAA+GGG + chr4_1:83962373-83962392 None:intergenic 50.0%
TTGGGAATGGAGGATTAGGC+CGG - chr4_1:83962373-83962392 Msa0579290:intron 50.0%
CTAAGTCCATATCCCCATGC+AGG + chr4_1:83962441-83962460 None:intergenic 50.0%
ACGTATAACGAAGGACGGTC+AGG - chr4_1:83962485-83962504 Msa0579290:intron 50.0%
TATAACGAAGGACGGTCAGG+AGG - chr4_1:83962488-83962507 Msa0579290:intron 50.0%
AAGAACAAGCACGCCTGCAT+AGG + chr4_1:83962598-83962617 None:intergenic 50.0%
GTCCATTGCTTAGCTCCATC+TGG + chr4_1:83962783-83962802 None:intergenic 50.0%
GATGGAGCTAAGCAATGGAC+TGG - chr4_1:83962783-83962802 Msa0579290:intron 50.0%
ATTATGCTCAGCCTCTCTCC+AGG - chr4_1:83963340-83963359 Msa0579290:intron 50.0%
GGACTCCCTTCCAGATAAAG+TGG - chr4_1:83963409-83963428 Msa0579290:intron 50.0%
CTCCCTTCCAGATAAAGTGG+TGG - chr4_1:83963412-83963431 Msa0579290:intron 50.0%
! GCTCAGGAATGCAGAGTGTT+GGG + chr4_1:83963457-83963476 None:intergenic 50.0%
AGCTCAGGAATGCAGAGTGT+TGG + chr4_1:83963458-83963477 None:intergenic 50.0%
CTCCATTTCTCTAGTGCCTC+TGG + chr4_1:83963720-83963739 None:intergenic 50.0%
! TATTGAGTTGCCGGATTCGG+TGG - chr4_1:83964024-83964043 Msa0579290:CDS 50.0%
TCTTGCCGATGATCCTGTTG+AGG - chr4_1:83964069-83964088 Msa0579290:CDS 50.0%
CGAACCATCATTGGCAGGTT+TGG + chr4_1:83964271-83964290 None:intergenic 50.0%
ATGGGGTGACACCTAGAAGA+TGG - chr4_1:83964536-83964555 Msa0579290:intron 50.0%
ATAGGCGACTCCTTAGTCGA+AGG - chr4_1:83964796-83964815 Msa0579290:CDS 50.0%
TGTGAAAGATGGCAACGCCA+TGG - chr4_1:83965533-83965552 Msa0579290:intron 50.0%
! GGCAACGCCATGGCATTTTA+TGG - chr4_1:83965543-83965562 Msa0579290:intron 50.0%
TGATGTCAGATGGCAGACCT+TGG + chr4_1:83965609-83965628 None:intergenic 50.0%
CCTCCAAAAACACAAACCCG+AGG + chr4_1:83966136-83966155 None:intergenic 50.0%
!!! CCTCGGGTTTGTGTTTTTGG+AGG - chr4_1:83966133-83966152 Msa0579290:intron 50.0%
GTTTAGTACAGCTGGGATGG+AGG - chr4_1:83966779-83966798 Msa0579290:intron 50.0%
GCACGAGCTGAAGAAATTGC+AGG - chr4_1:83966921-83966940 Msa0579290:intron 50.0%
TGCAGTTTGTACCAGACCCA+AGG - chr4_1:83967192-83967211 Msa0579290:intron 50.0%
TAGGGAAGTCCTTGCCAACA+AGG + chr4_1:83967328-83967347 None:intergenic 50.0%
CAAGGACTTCCCTAGCTACT+TGG - chr4_1:83967334-83967353 Msa0579290:intron 50.0%
CTTGGCACTCCAAGTAGCTA+GGG + chr4_1:83967346-83967365 None:intergenic 50.0%
TCTTGGCACTCCAAGTAGCT+AGG + chr4_1:83967347-83967366 None:intergenic 50.0%
! TAGCTACTTGGAGTGCCAAG+AGG - chr4_1:83967346-83967365 Msa0579290:intron 50.0%
GTGCCAAGAGGAAGTTGACA+AGG - chr4_1:83967358-83967377 Msa0579290:intron 50.0%
AGGTGAGCTTGAATGCCTGC+AGG + chr4_1:83960245-83960264 None:intergenic 55.0%
TGTTGCCAGCGACAAAGCAG+CGG - chr4_1:83960378-83960397 Msa0579290:CDS 55.0%
GTCCTTATGCTGAGGCTCTG+AGG - chr4_1:83961791-83961810 Msa0579290:intron 55.0%
!! TGCTGAGGCTCTGAGGAAAC+TGG - chr4_1:83961798-83961817 Msa0579290:intron 55.0%
!! GCTGAGGCTCTGAGGAAACT+GGG - chr4_1:83961799-83961818 Msa0579290:intron 55.0%
GCCCTTGGGAATGGAGGATT+AGG - chr4_1:83962369-83962388 Msa0579290:intron 55.0%
GGCCTAATCCTCCATTCCCA+AGG + chr4_1:83962374-83962393 None:intergenic 55.0%
GGCCAGATGGAGCTAAGCAA+TGG - chr4_1:83962778-83962797 Msa0579290:intron 55.0%
!! GGAGCTAAGCAATGGACTGG+AGG - chr4_1:83962786-83962805 Msa0579290:intron 55.0%
GTGCCTCTGGTAGAACTGTG+TGG + chr4_1:83963707-83963726 None:intergenic 55.0%
CCATGCGAACCATCATTGGC+AGG + chr4_1:83964276-83964295 None:intergenic 55.0%
CCTGCCAATGATGGTTCGCA+TGG - chr4_1:83964273-83964292 Msa0579290:intron 55.0%
TGCTGGGACAATTCACTGCC+AGG + chr4_1:83966662-83966681 None:intergenic 55.0%
! CAGTTCCGCTGCTTTGTCGC+TGG + chr4_1:83960386-83960405 None:intergenic 60.0%
AGGAGCCAGATGCAGCCCTT+GGG - chr4_1:83962355-83962374 Msa0579290:intron 60.0%
CCATTCCCAAGGGCTGCATC+TGG + chr4_1:83962363-83962382 None:intergenic 60.0%
CCAGATGCAGCCCTTGGGAA+TGG - chr4_1:83962360-83962379 Msa0579290:intron 60.0%
GATGCAGCCCTTGGGAATGG+AGG - chr4_1:83962363-83962382 Msa0579290:intron 60.0%
CAGGAGCCAGATGCAGCCCT+TGG - chr4_1:83962354-83962373 Msa0579290:intron 65.0%
ACAGCTGGGATGGAGGCCAG+TGG - chr4_1:83966786-83966805 Msa0579290:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 83959987 83968227 83959987 ID=Msa0579290;Name=Msa0579290
chr4_1 mRNA 83959987 83968227 83959987 ID=Msa0579290-mRNA-1;Parent=Msa0579290;Name=Msa0579290-mRNA-1;_AED=0.11;_eAED=0.11;_QI=230|0.86|0.93|1|1|1|16|382|995
chr4_1 exon 83959987 83960485 83959987 ID=Msa0579290-mRNA-1:exon:30718;Parent=Msa0579290-mRNA-1
chr4_1 exon 83960654 83960698 83960654 ID=Msa0579290-mRNA-1:exon:30717;Parent=Msa0579290-mRNA-1
chr4_1 exon 83960817 83961017 83960817 ID=Msa0579290-mRNA-1:exon:30716;Parent=Msa0579290-mRNA-1
chr4_1 exon 83961243 83961429 83961243 ID=Msa0579290-mRNA-1:exon:30715;Parent=Msa0579290-mRNA-1
chr4_1 exon 83961527 83961603 83961527 ID=Msa0579290-mRNA-1:exon:30714;Parent=Msa0579290-mRNA-1
chr4_1 exon 83961956 83962192 83961956 ID=Msa0579290-mRNA-1:exon:30713;Parent=Msa0579290-mRNA-1
chr4_1 exon 83963197 83963325 83963197 ID=Msa0579290-mRNA-1:exon:30712;Parent=Msa0579290-mRNA-1
chr4_1 exon 83963557 83963709 83963557 ID=Msa0579290-mRNA-1:exon:30711;Parent=Msa0579290-mRNA-1
chr4_1 exon 83963824 83964276 83963824 ID=Msa0579290-mRNA-1:exon:30710;Parent=Msa0579290-mRNA-1
chr4_1 exon 83964411 83964528 83964411 ID=Msa0579290-mRNA-1:exon:30709;Parent=Msa0579290-mRNA-1
chr4_1 exon 83964674 83964945 83964674 ID=Msa0579290-mRNA-1:exon:30708;Parent=Msa0579290-mRNA-1
chr4_1 exon 83965234 83965509 83965234 ID=Msa0579290-mRNA-1:exon:30707;Parent=Msa0579290-mRNA-1
chr4_1 exon 83965681 83965857 83965681 ID=Msa0579290-mRNA-1:exon:30706;Parent=Msa0579290-mRNA-1
chr4_1 exon 83966365 83966466 83966365 ID=Msa0579290-mRNA-1:exon:30705;Parent=Msa0579290-mRNA-1
chr4_1 exon 83966558 83966790 83966558 ID=Msa0579290-mRNA-1:exon:30704;Parent=Msa0579290-mRNA-1
chr4_1 exon 83967787 83968227 83967787 ID=Msa0579290-mRNA-1:exon:30703;Parent=Msa0579290-mRNA-1
chr4_1 five_prime_UTR 83967998 83968227 83967998 ID=Msa0579290-mRNA-1:five_prime_utr;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83967787 83967997 83967787 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83966558 83966790 83966558 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83966365 83966466 83966365 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83965681 83965857 83965681 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83965234 83965509 83965234 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83964674 83964945 83964674 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83964411 83964528 83964411 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83963824 83964276 83963824 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83963557 83963709 83963557 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83963197 83963325 83963197 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83961956 83962192 83961956 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83961527 83961603 83961527 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83961243 83961429 83961243 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83960817 83961017 83960817 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83960654 83960698 83960654 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 CDS 83960369 83960485 83960369 ID=Msa0579290-mRNA-1:cds;Parent=Msa0579290-mRNA-1
chr4_1 three_prime_UTR 83959987 83960368 83959987 ID=Msa0579290-mRNA-1:three_prime_utr;Parent=Msa0579290-mRNA-1
Gene Sequence

>Msa0579290

ATGTCTGCTCTACCATTCTCAACAACCTGCAGGCATTCAAGCTCACCTTTACATTCCCATTCCAAATCAAACATTTGGCAGCGACAAAACAACATTTGGCAGTTGTTTGTCATCACAAAGTCAAATTCCAGAAGAGCAATTAGAAAGCTCTATGTGAAGAATGTTGCCAGCGACAAAGCAGCGGAACTGAAAGAACGACTCATTGGACAAGGCACCACTTCAAATGAATTCGTTGCAGATTCTGCATCTGTAGCTTCAAGCATAAAATATCATGCTGAGTTCACCACATCTTTTTCTCCTGAGAAATTTGAGCCCAGTAAGGCTTACTTTGCAACTGCAGAGAGTGTCCGTGATTCCCTTATCATAAATTGGAATGCAACATATGAATATTATGAGAGGGTTAATGTTAAGCAAGCTTATTACATGTCTATGGAGTATCTACAGGGTAGGGCATTGTTAAATGCAATTGGGAATTTACAACTCTCAGGTCCTTATGCTGAGGCTCTGAGGAAACTGGGTTACAATTTAGAGGATGTGGCTAATCAGGAGCCAGATGCAGCCCTTGGGAATGGAGGATTAGGCCGGCTTGCTTCTTGCTTTCTAGACTCCTTGGCAACACTGAATTACCCTGCATGGGGATATGGACTTAGATACAGGTATGGTTTATTCAAACAACGTATAACGAAGGACGGTCAGGAGGAAGTTGCTGAAAACTGGCTTGAGATGGGAAATCCCTGGGAAATTCAGAGAAACGATGTCTCTTATCCAGTTAGATTCTATGGAGAAGTTATTTCAGGGCCAGATGGAGCTAAGCAATGGACTGGAGGAGAAAGTATTTTGGCTGTTGCTTATGATGTTCCAATACCTGGATACAAAACTAGAACCACCATAAACTTGCGATTGTGGTCCTCTAAAGTTTCAACTGAAGAATTTGATTTGAAGGCTTTCAATACTGGGGATCATGCCAAAGCATACGCTGTCATGAAGAATGCAGAGAAGATCTGTTACATTCTATACCCTGGGGATGAATCAATAGAAGGCAAGACTTTACGACTAAAGCAACAATATACATTATGCTCAGCCTCTCTCCAGGATATCATTGCACGCTTTGAAAAGAGATCAGGAATGACGGTAAATTGGGACTCCCTTCCAGATAAAGTGGTGGTACAAATGAATGATACTCACCCAACACTCTGCATTCCTGAGCTGATTAGGATATTAATAGATGTGAAGGGTTTAAGCTGGGAGAAAGCTTGGGATATTACTAAAAGAACGGTTGCTTACACAAACCACACAGTTCTACCAGAGGCACTAGAGAAATGGAGTTTGACTCTTCTGCAGGATTTACTTCCTCGACATGTGGAAATAATAAAAAGGATAGATGAGGAGTTTACACATGAAGTTGTTGCTGAGTATGGGACAAATGATCTTAACATGCTGCAAGAAAAGCTCAGAAAGATGAGAATACTAGAGAATATTGAGTTGCCGGATTCGGTGGTCGAGTTTATTAACAATACAGTTCTTGCCGATGATCCTGTTGAGGAAATTGATGTTGATGATAATGATATAAAGGCAACAGAAAAGAAAGATAATGAAGAAGAAAATGATGATGATGACGGCGAAGAAGAAGAAGATGAAGTGGGGAAAGACAAACGAGAAGCAGAAGATGGTGAAGAGCTTGTTGTAGAGAACAAAAAAGAATGGAAATTTGAAGTTGATCCAAACCTGCCAATGATGGTTCGCATGGCTAACCTATGTGTTGTTGGTGGTTTTTCTGTGAACGGAGTAGCTGAGATTCACAGTGAGATTGTAAAAGAGGAAGTTTTTAATGAATTTTACGAGTTGTGGCCTGAGAAATTCCAGAATAAAACAAATGGGGTGACACCTAGAAGATGGATCCGTTTCTGTAATCCCGACCTTAGTAAAATCATAACCAAATGGATTGGAACAGAAGACTGGGTAACAGATCTTGAGAAATTGGCTGTACTTCGCAAGTTTGCAGATAATGAGGATCTGCAATCAGAGTGGATAGAATCAAAAAGGAGAAACAAGATTAACGTTGCATCATTTATCAAAGAGAAAACAGGTTATGTTGTCAGTCCAGATGCAATGTTTGATGTACAGGTAAAGCGTATTCATGAATACAAACGGCAGTTACTGAATATCATGGGAATTGTTTATCGCTACAAAAAAATGAAAGAATTGAATGCTGAGGAAAGAAAACAATTGTTTGTTCCTCGGGTTTGTGTTTTTGGAGGGAAAGCATTTGCAACATATGTTCAAGCCAAGAGGATTGTAAAATTCATCACAGATGTAGGAGCTACAGTTAATCACGATCCAGAGATTGGAGATCTTTTGAAGGTTATATTTGTTCCTGATTACAATGTTAGTGTTGCTGAAATGCTAATTCCTGGCAGTGAATTGTCCCAGCACATTAGTACAGCTGGGATGGAGGCCAGTGGAACAAGCAACATGAAATTTGCAATGAATGGATGTGTGCAAATTGGAACTCTCGATGGGGCTAATGTTGAAATAAGAGAAGAAGTTGGAGAAGACAACTTCTTTCTTTTTGGCGCACGAGCTGAAGAAATTGCAGGGTTAAGGAAAGAAAGAGCAGAAGGAAAGTTTGTACCAGACCCAAGGTTTGAAGAAGTAAAGGCATATGTTAGAAGTGGTGTTTTTGGCACCTACAACTACGACGAATTGATGGGATCTTTGGAAGGGAATGAAGGCTATGGCCGTGCTGATTATTTCCTTGTTGGCAAGGACTTCCCTAGCTACTTGGAGTGCCAAGAGGAAGTTGACAAGGCATACCGTGATCAAAAAGCACATCATATTCATACCTGTGTTGAACACAAGTTGTCTCAACTGAAATGGACAAGAATGTCAATCTTGAACACAGCTGGTTCGTATAAATTCAGCAGTGACCGGACTATTCATGAATATGCCAGAGATATATGGAGAATTGAGCCAGTTGTATTGCCTTGA
Protein sequence

>Msa0579290

MSALPFSTTCRHSSSPLHSHSKSNIWQRQNNIWQLFVITKSNSRRAIRKLYVKNVASDKAAELKERLIGQGTTSNEFVADSASVASSIKYHAEFTTSFSPEKFEPSKAYFATAESVRDSLIINWNATYEYYERVNVKQAYYMSMEYLQGRALLNAIGNLQLSGPYAEALRKLGYNLEDVANQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYRYGLFKQRITKDGQEEVAENWLEMGNPWEIQRNDVSYPVRFYGEVISGPDGAKQWTGGESILAVAYDVPIPGYKTRTTINLRLWSSKVSTEEFDLKAFNTGDHAKAYAVMKNAEKICYILYPGDESIEGKTLRLKQQYTLCSASLQDIIARFEKRSGMTVNWDSLPDKVVVQMNDTHPTLCIPELIRILIDVKGLSWEKAWDITKRTVAYTNHTVLPEALEKWSLTLLQDLLPRHVEIIKRIDEEFTHEVVAEYGTNDLNMLQEKLRKMRILENIELPDSVVEFINNTVLADDPVEEIDVDDNDIKATEKKDNEEENDDDDGEEEEDEVGKDKREAEDGEELVVENKKEWKFEVDPNLPMMVRMANLCVVGGFSVNGVAEIHSEIVKEEVFNEFYELWPEKFQNKTNGVTPRRWIRFCNPDLSKIITKWIGTEDWVTDLEKLAVLRKFADNEDLQSEWIESKRRNKINVASFIKEKTGYVVSPDAMFDVQVKRIHEYKRQLLNIMGIVYRYKKMKELNAEERKQLFVPRVCVFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFAMNGCVQIGTLDGANVEIREEVGEDNFFLFGARAEEIAGLRKERAEGKFVPDPRFEEVKAYVRSGVFGTYNYDELMGSLEGNEGYGRADYFLVGKDFPSYLECQEEVDKAYRDQKAHHIHTCVEHKLSQLKWTRMSILNTAGSYKFSSDRTIHEYARDIWRIEPVVLP*