AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0223410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223410 MtrunA17_Chr2g0328831 100.000 223 0 0 1 223 1 223 9.42e-171 468
Msa0223410 MtrunA17_Chr5g0435161 98.655 223 3 0 1 223 1 223 1.55e-168 462
Msa0223410 MtrunA17_Chr7g0255251 32.558 129 87 0 9 137 2 130 4.30e-18 79.3
Msa0223410 MtrunA17_Chr4g0045861 32.283 127 86 0 11 137 4 130 7.32e-17 75.9
Msa0223410 MtrunA17_Chr3g0139211 27.273 209 126 4 15 217 13 201 1.11e-15 73.2
Msa0223410 MtrunA17_Chr4g0010841 94.118 34 2 0 58 91 1 34 1.94e-15 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223410 AT3G60820.1 87.444 223 28 0 1 223 1 223 2.88e-150 417
Msa0223410 AT3G60820.3 87.444 223 28 0 1 223 1 223 2.88e-150 417
Msa0223410 AT3G60820.2 86.547 223 30 0 1 223 1 223 2.73e-148 412
Msa0223410 AT1G21720.1 32.558 129 87 0 9 137 2 130 2.38e-18 80.5
Msa0223410 AT1G77440.2 31.783 129 88 0 9 137 2 130 1.74e-17 78.2
Msa0223410 AT1G77440.1 31.783 129 88 0 9 137 2 130 1.74e-17 78.2
Msa0223410 AT4G31300.3 26.794 209 127 4 15 217 12 200 6.16e-13 66.2
Msa0223410 AT4G31300.1 26.794 209 127 4 15 217 12 200 6.16e-13 66.2
Msa0223410 AT4G31300.2 24.878 205 137 3 15 217 12 201 5.99e-12 63.5

Find 87 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTACAAGTGAGAGATTT+TGG 0.149319 2_1:+72954958 None:intergenic
CGCGGTGGTTCTGGGTGGTT+AGG 0.196824 2_1:+72956398 None:intergenic
GATTCGGAACGCGGTGGTTC+TGG 0.199934 2_1:+72956389 None:intergenic
ATAGACCACATTCAGAATTT+AGG 0.231129 2_1:+72951642 None:intergenic
ATTAATATAACAAAATATTT+AGG 0.260434 2_1:+72951462 None:intergenic
TGTTGTTTAGTCATGGTAAA+TGG 0.280507 2_1:+72955223 None:intergenic
AAGCTAGAGTTGGTTTCATT+TGG 0.293881 2_1:+72951433 None:intergenic
GGATATAGCTCTCAGGGTTC+TGG 0.295385 2_1:-72952329 Msa0223410:CDS
TGACTAAACAACACGCTAAT+TGG 0.296923 2_1:-72955213 Msa0223410:CDS
AAATGTGTGATGGCTTCTTC+TGG 0.302083 2_1:-72954030 Msa0223410:CDS
TTGGAAAGCATTCCTCGATT+TGG 0.328143 2_1:+72951604 None:intergenic
ACCGCGTTCCGAATCGTTTC+CGG 0.329036 2_1:-72956381 Msa0223410:five_prime_UTR
TACTATTCTTTCAATGTGTT+GGG 0.329503 2_1:-72952502 Msa0223410:CDS
GATGAATACCACCAGCATTT+AGG 0.333947 2_1:+72951753 None:intergenic
TTACTATTCTTTCAATGTGT+TGG 0.338506 2_1:-72952503 Msa0223410:CDS
TACCCTCCATTGTTGTCATA+TGG 0.350595 2_1:+72955187 None:intergenic
AGATCTTGTGTCGCAATTGC+TGG 0.365009 2_1:-72955052 Msa0223410:CDS
AGCTAGAGTTGGTTTCATTT+GGG 0.366906 2_1:+72951434 None:intergenic
GGCAGGTAAGAGGAGTGGGC+TGG 0.368090 2_1:+72952262 None:intergenic
ATTCGGAACGCGGTGGTTCT+GGG 0.373901 2_1:+72956390 None:intergenic
AGACTTGTTCTGAGAATGTT+TGG 0.378202 2_1:-72951671 Msa0223410:three_prime_UTR
CAGGTAAGAGGAGTGGGCTG+GGG 0.380698 2_1:+72952264 None:intergenic
GCAGGTAAGAGGAGTGGGCT+GGG 0.386622 2_1:+72952263 None:intergenic
GCATTCCTCGATTTGGCTTA+GGG 0.397216 2_1:+72951611 None:intergenic
AGGTAAGAGGAGTGGGCTGG+GGG 0.399364 2_1:+72952265 None:intergenic
AGACTAGAAATAGCGCAAAT+TGG 0.405425 2_1:+72951585 None:intergenic
GAAAGCAATTGAGCCATTGC+AGG 0.407579 2_1:+72952556 None:intergenic
AGCATTCCTCGATTTGGCTT+AGG 0.427721 2_1:+72951610 None:intergenic
ACTTGAATAAAGTTAAGAAA+TGG 0.434491 2_1:+72951508 None:intergenic
ACTTCACCTGGGCAGGTAAG+AGG 0.436789 2_1:+72952252 None:intergenic
GCTATATCCCACCCTCTCAT+AGG 0.437293 2_1:+72952343 None:intergenic
GCGGTGGTTCTGGGTGGTTA+GGG 0.446573 2_1:+72956399 None:intergenic
CCCACTCCTCTTACCTGCCC+AGG 0.466732 2_1:-72952258 Msa0223410:intron
TTGTGTCGCAATTGCTGGAT+CGG 0.468844 2_1:-72955047 Msa0223410:CDS
TTCAAGAACTTCACCTGGGC+AGG 0.478299 2_1:+72952245 None:intergenic
AAAAGCATCAGTCTTTCCTT+AGG 0.478944 2_1:+72951717 None:intergenic
TTCAGTTGGTTATCAAGAAA+CGG 0.480345 2_1:+72952290 None:intergenic
TGAAGCAGAAGCAGTTGATC+TGG 0.483304 2_1:-72952122 Msa0223410:CDS
TGGTATTCATCGTGAGTTCA+TGG 0.483816 2_1:-72951741 Msa0223410:CDS
GTCTTCACTTATGATGCTGT+TGG 0.484095 2_1:-72952368 Msa0223410:CDS
TGTGGTGGCCGGAAACGATT+CGG 0.484429 2_1:+72956373 None:intergenic
GAGGGTGGGATATAGCTCTC+AGG 0.498734 2_1:-72952336 Msa0223410:CDS
AGTGTGAGTAATATGCAATC+AGG 0.502783 2_1:-72951404 Msa0223410:three_prime_UTR
ACGAGTGAGGATGTTGTAAC+CGG 0.515362 2_1:+72954988 None:intergenic
TCACCACGGCGGAGAAAGCT+AGG 0.516976 2_1:+72956348 None:intergenic
AGGAGTGCTACCAATTGTCC+TGG 0.523933 2_1:-72951384 Msa0223410:three_prime_UTR
CACTACTGCAAAGCTAGAGT+TGG 0.524877 2_1:+72951423 None:intergenic
GCAGATGAGCTGCCCTGCAA+TGG 0.526195 2_1:-72952569 Msa0223410:CDS
AACACATTGAAAGAATAGTA+AGG 0.535290 2_1:+72952505 None:intergenic
ACGTGGAAAGAAAGAAACTA+AGG 0.540477 2_1:-72956481 Msa0223410:five_prime_UTR
CCTGGGCAGGTAAGAGGAGT+GGG 0.542041 2_1:+72952258 None:intergenic
AAAGCTAGGACTGTGGTGGC+CGG 0.548914 2_1:+72956362 None:intergenic
TGCTTCAGACAGTGGAGTAA+CGG 0.553618 2_1:+72952138 None:intergenic
ATCGTGAGTTCATGGACCTA+AGG 0.553653 2_1:-72951733 Msa0223410:CDS
ATGCTGTTGGTTCCTATGAG+AGG 0.566800 2_1:-72952355 Msa0223410:CDS
TGATGTGAAGGCTTTGCAGA+AGG 0.566876 2_1:-72953998 Msa0223410:CDS
ATTCCTCGATTTGGCTTAGG+GGG 0.570869 2_1:+72951613 None:intergenic
ACCTGGGCAGGTAAGAGGAG+TGG 0.577674 2_1:+72952257 None:intergenic
ATTAGCGTGTTGTTTAGTCA+TGG 0.578211 2_1:+72955216 None:intergenic
CTCCATATGACAACAATGGA+GGG 0.584655 2_1:-72955189 Msa0223410:intron
GTGTGATCGCAGCTGATACA+AGG 0.586277 2_1:-72955018 Msa0223410:CDS
TATTCTTTCAATGTGTTGGG+CGG 0.587319 2_1:-72952499 Msa0223410:CDS
GAAATTGTCATCCTAAATGC+TGG 0.591622 2_1:-72951764 Msa0223410:CDS
ACTGCTTCTGCTTCAGACAG+TGG 0.591728 2_1:+72952130 None:intergenic
GGCGGAGAAAGCTAGGACTG+TGG 0.593409 2_1:+72956355 None:intergenic
GCCGGAAACGATTCGGAACG+CGG 0.600119 2_1:+72956380 None:intergenic
AGGGTGGGATATAGCTCTCA+GGG 0.602013 2_1:-72952335 Msa0223410:CDS
AAAGCAATTGAGCCATTGCA+GGG 0.602125 2_1:+72952557 None:intergenic
TGTTGGTTCCTATGAGAGGG+TGG 0.605372 2_1:-72952351 Msa0223410:CDS
AAGAAACGGCATAATGAGAG+TGG 0.608965 2_1:+72952304 None:intergenic
ATAGCTCACCTTCACTGTCA+AGG 0.612785 2_1:+72952476 None:intergenic
TGCTGTTGGTTCCTATGAGA+GGG 0.619026 2_1:-72952354 Msa0223410:CDS
CATTCCTCGATTTGGCTTAG+GGG 0.623599 2_1:+72951612 None:intergenic
TCTCCATATGACAACAATGG+AGG 0.635572 2_1:-72955190 Msa0223410:CDS
AGTCCTAGCTTTCTCCGCCG+TGG 0.638758 2_1:-72956351 Msa0223410:intron
AGTGAGGATGTTGTAACCGG+TGG 0.639435 2_1:+72954991 None:intergenic
GTTGGTTCCTATGAGAGGGT+GGG 0.639673 2_1:-72952350 Msa0223410:CDS
GTGCTCCTAAATTCTGAATG+TGG 0.642138 2_1:-72951647 Msa0223410:three_prime_UTR
TGGTCTCCATATGACAACAA+TGG 0.646174 2_1:-72955193 Msa0223410:CDS
GCTGATACAAGGATGTCCAC+CGG 0.646826 2_1:-72955007 Msa0223410:CDS
GGAGAAAGCTAGGACTGTGG+TGG 0.648088 2_1:+72956358 None:intergenic
TTGGGCGGCCTTGACAGTGA+AGG 0.657648 2_1:-72952484 Msa0223410:intron
CAGAGCTGAGAAATGTGTGA+TGG 0.663843 2_1:-72954040 Msa0223410:CDS
CGGAACGCGGTGGTTCTGGG+TGG 0.664203 2_1:+72956393 None:intergenic
ATTGTCATCCTAAATGCTGG+TGG 0.706189 2_1:-72951761 Msa0223410:CDS
GGAAACGATTCGGAACGCGG+TGG 0.738869 2_1:+72956383 None:intergenic
GAATGAAAGTCTCACCACGG+CGG 0.776825 2_1:+72956337 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - chr2_1:72952951-72952970 Msa0223410:intron 0.0%
!! TATATATATATATATATATA+GGG - chr2_1:72952952-72952971 Msa0223410:intron 0.0%
!! AAAAAAAAAAAAAAAAAAAA+CGG + chr2_1:72953204-72953223 None:intergenic 0.0%
!! ATTGAAAAATATTAAAACAA+GGG + chr2_1:72952762-72952781 None:intergenic 10.0%
!! AATTGAAAAATATTAAAACA+AGG + chr2_1:72952763-72952782 None:intergenic 10.0%
!! AAAAAAAAAAAAAAAAAACG+GGG + chr2_1:72953202-72953221 None:intergenic 10.0%
!! TTGAAAAATATTAAAACAAG+GGG + chr2_1:72952761-72952780 None:intergenic 15.0%
!!! ATATATATATTAAGTTGTGT+TGG + chr2_1:72952941-72952960 None:intergenic 15.0%
!! AAAAAAAAAAAAAAAAACGG+GGG + chr2_1:72953201-72953220 None:intergenic 15.0%
!! AGAATTAATTAATCGATAAA+AGG + chr2_1:72953361-72953380 None:intergenic 15.0%
!! TTCAGCAATATATATATATA+GGG + chr2_1:72953651-72953670 None:intergenic 15.0%
!! TTTCAGCAATATATATATAT+AGG + chr2_1:72953652-72953671 None:intergenic 15.0%
!! TTATTTATTTATCTGTTACA+AGG + chr2_1:72953932-72953951 None:intergenic 15.0%
!!! TAACTTTTATATAGAAAAGA+TGG + chr2_1:72954854-72954873 None:intergenic 15.0%
!! TATGCAAAACAAATAAAATT+AGG + chr2_1:72954911-72954930 None:intergenic 15.0%
!!! TTATCATTTCTTTACAATTT+TGG + chr2_1:72954997-72955016 None:intergenic 15.0%
!!! TTAGATGTTAATTTGAAATT+TGG - chr2_1:72955128-72955147 Msa0223410:intron 15.0%
!!! TAAATCATATTTTAATGTAG+AGG + chr2_1:72955696-72955715 None:intergenic 15.0%
!! ATTAAAATATGATTTATTGC+AGG - chr2_1:72955700-72955719 Msa0223410:intron 15.0%
!!! ATTGGTTTTGAATTAGATTT+AGG - chr2_1:72951695-72951714 Msa0223410:three_prime_UTR 20.0%
!!! TGATGATGATATTCAAATTT+TGG - chr2_1:72952055-72952074 Msa0223410:intron 20.0%
!!! TATTTTTGGTTTTTTTCTCA+TGG - chr2_1:72952139-72952158 Msa0223410:CDS 20.0%
!! CATATCCAGATAAAAATATA+GGG + chr2_1:72952209-72952228 None:intergenic 20.0%
!! TCATATCCAGATAAAAATAT+AGG + chr2_1:72952210-72952229 None:intergenic 20.0%
!!! CTTTGATTTTTTGTTTGATT+TGG - chr2_1:72952266-72952285 Msa0223410:CDS 20.0%
!!! AAGAATTCTGATTTGTATTT+TGG - chr2_1:72952365-72952384 Msa0223410:CDS 20.0%
!! TTTCAGTTGTAGTTATATTA+TGG - chr2_1:72952409-72952428 Msa0223410:intron 20.0%
!!! ATATTATGGTTTGTGATAAT+TGG - chr2_1:72952423-72952442 Msa0223410:intron 20.0%
!! TGAAAAATATTAAAACAAGG+GGG + chr2_1:72952760-72952779 None:intergenic 20.0%
!! AAACGTAAAACCTAATTATT+TGG + chr2_1:72953172-72953191 None:intergenic 20.0%
!!! ACAATTTTATGCATGATAAT+TGG + chr2_1:72953330-72953349 None:intergenic 20.0%
!! AATCTAATCTGGTAATTAAT+TGG - chr2_1:72953459-72953478 Msa0223410:intron 20.0%
!!! GATTTTGTATATCAATTACA+CGG - chr2_1:72953538-72953557 Msa0223410:intron 20.0%
!! AAGGAAATAATTAAATCTGA+TGG - chr2_1:72953569-72953588 Msa0223410:intron 20.0%
!!! TTGTTTCTCATATAAGATAT+TGG - chr2_1:72953608-72953627 Msa0223410:intron 20.0%
!! ACAATAATAGAAAACCAATT+GGG + chr2_1:72953675-72953694 None:intergenic 20.0%
!! TACAATAATAGAAAACCAAT+TGG + chr2_1:72953676-72953695 None:intergenic 20.0%
!! TATTATTGTAAAACTTCTAG+TGG - chr2_1:72953686-72953705 Msa0223410:intron 20.0%
!! ATTATTGTAAAACTTCTAGT+GGG - chr2_1:72953687-72953706 Msa0223410:intron 20.0%
!! ATAAACACAACTAAAAAAAG+AGG + chr2_1:72953746-72953765 None:intergenic 20.0%
!! TTTAGATTGTAAACATATTC+AGG - chr2_1:72953957-72953976 Msa0223410:intron 20.0%
!! TAGTTAGTTACATAGTTATT+TGG - chr2_1:72954451-72954470 Msa0223410:intron 20.0%
!! ATAGAGTATGTGTATAAATT+AGG - chr2_1:72954481-72954500 Msa0223410:intron 20.0%
!! TTAAGAAAATAAGAAAGACT+AGG + chr2_1:72954607-72954626 None:intergenic 20.0%
!! AAAATAAATATAGAGGTGAA+TGG + chr2_1:72954714-72954733 None:intergenic 20.0%
!! GAACATCAAAATAAATATAG+AGG + chr2_1:72954721-72954740 None:intergenic 20.0%
!! AAAAATAGTCCAATAAGTAT+AGG + chr2_1:72954774-72954793 None:intergenic 20.0%
!! TATAGAAACATTAGAAAAGA+GGG + chr2_1:72954802-72954821 None:intergenic 20.0%
!! TTATAGAAACATTAGAAAAG+AGG + chr2_1:72954803-72954822 None:intergenic 20.0%
!! TTTGGATATACAATTATACT+TGG + chr2_1:72954979-72954998 None:intergenic 20.0%
!!! AATTTGAAATTTGGTGAAAT+TGG - chr2_1:72955137-72955156 Msa0223410:intron 20.0%
!!! ATTTGAAATTTGGTGAAATT+GGG - chr2_1:72955138-72955157 Msa0223410:intron 20.0%
!!! AGTTTGTTTATGTATGAAAA+CGG - chr2_1:72955812-72955831 Msa0223410:intron 20.0%
!! CAAAATGACAATTATGTAAA+AGG + chr2_1:72956023-72956042 None:intergenic 20.0%
!! ACTTGAATAAAGTTAAGAAA+TGG + chr2_1:72956359-72956378 None:intergenic 20.0%
! ATTCCTTGATGTTTGATTAT+TGG - chr2_1:72951677-72951696 Msa0223410:three_prime_UTR 25.0%
! AAACCAATAATCAAACATCA+AGG + chr2_1:72951683-72951702 None:intergenic 25.0%
! ACTTAACTTCAGTTTATCTT+TGG + chr2_1:72951789-72951808 None:intergenic 25.0%
!!! GCTTATTTGAGATTTTTTAC+TGG + chr2_1:72951907-72951926 None:intergenic 25.0%
! AACAAAAATAATGGCCTATT+TGG + chr2_1:72951934-72951953 None:intergenic 25.0%
! ACAAACAGCAACAAAAATAA+TGG + chr2_1:72951943-72951962 None:intergenic 25.0%
! GACAACAAAATTTACAAACA+CGG + chr2_1:72951993-72952012 None:intergenic 25.0%
!! ATATTCAAATTTTGGACGAA+GGG - chr2_1:72952063-72952082 Msa0223410:intron 25.0%
!!! TCTTCGATTGTTATTTGATT+TGG - chr2_1:72952233-72952252 Msa0223410:intron 25.0%
! AAAAATATTAAAACAAGGGG+GGG + chr2_1:72952758-72952777 None:intergenic 25.0%
! GAAAAATATTAAAACAAGGG+GGG + chr2_1:72952759-72952778 None:intergenic 25.0%
! TCGTTTCTCATATAAGATAT+TGG + chr2_1:72953005-72953024 None:intergenic 25.0%
!! CAATTACACAGTATGTTTTA+AGG + chr2_1:72953081-72953100 None:intergenic 25.0%
! AATTGGAACGATTATCAATT+TGG + chr2_1:72953313-72953332 None:intergenic 25.0%
! AAAAAATTGAGCTACAATCT+TGG + chr2_1:72953511-72953530 None:intergenic 25.0%
! TTATTGTAAAACTTCTAGTG+GGG - chr2_1:72953688-72953707 Msa0223410:intron 25.0%
! TAACAAATAGAGAGGTTAAA+AGG + chr2_1:72954145-72954164 None:intergenic 25.0%
! AGTTATGTTAACAAATAGAG+AGG + chr2_1:72954153-72954172 None:intergenic 25.0%
!!! GTTAAATGTTGCTTTGATTT+GGG - chr2_1:72954216-72954235 Msa0223410:intron 25.0%
! TATAAATTAGGAGAACACAA+AGG - chr2_1:72954493-72954512 Msa0223410:intron 25.0%
! ATAAATTAGGAGAACACAAA+GGG - chr2_1:72954494-72954513 Msa0223410:intron 25.0%
! AATATCGTAAAGTTTGTGAA+TGG - chr2_1:72954533-72954552 Msa0223410:intron 25.0%
! ATAGAAACATTAGAAAAGAG+GGG + chr2_1:72954801-72954820 None:intergenic 25.0%
! GTATAAACTTCTATAAAGGT+GGG + chr2_1:72954887-72954906 None:intergenic 25.0%
! AGTATAAACTTCTATAAAGG+TGG + chr2_1:72954888-72954907 None:intergenic 25.0%
!! AGGAGTATAAACTTCTATAA+AGG + chr2_1:72954891-72954910 None:intergenic 25.0%
! ATTGTAAAGAAATGATAAGC+AGG - chr2_1:72954999-72955018 Msa0223410:CDS 25.0%
! ATCTAACAACGTAATTGATA+AGG + chr2_1:72955114-72955133 None:intergenic 25.0%
!! GAAGCTTTAATTATTTGTCA+CGG + chr2_1:72955219-72955238 None:intergenic 25.0%
! AACACATTGAAAGAATAGTA+AGG + chr2_1:72955362-72955381 None:intergenic 25.0%
! TTACTATTCTTTCAATGTGT+TGG - chr2_1:72955361-72955380 Msa0223410:intron 25.0%
! TACTATTCTTTCAATGTGTT+GGG - chr2_1:72955362-72955381 Msa0223410:intron 25.0%
!!! GTGTTTTTCTTGAAGTATTT+TGG - chr2_1:72955645-72955664 Msa0223410:intron 25.0%
! TAAACACTAAAGTCAAAATG+TGG + chr2_1:72955895-72955914 None:intergenic 25.0%
!!! CATAATTGTCATTTTGCATT+AGG - chr2_1:72956027-72956046 Msa0223410:intron 25.0%
!! TTTTACTTCTGTATTTGCAT+CGG - chr2_1:72956326-72956345 Msa0223410:intron 25.0%
!! AATTAGATTTAGGCCTTGTT+TGG - chr2_1:72951705-72951724 Msa0223410:exon 30.0%
TTAAGCTATTCATCCAAACA+AGG + chr2_1:72951721-72951740 None:intergenic 30.0%
TCAAATAAGCCAATCCAAAT+AGG - chr2_1:72951917-72951936 Msa0223410:intron 30.0%
AAATAATGGCCTATTTGGAT+TGG + chr2_1:72951929-72951948 None:intergenic 30.0%
!!! TTTTGTTGCTGTTTGTTTGT+TGG - chr2_1:72951947-72951966 Msa0223410:intron 30.0%
TCTTCCAATATGAATACTTG+TGG - chr2_1:72952014-72952033 Msa0223410:intron 30.0%
! GATATTCAAATTTTGGACGA+AGG - chr2_1:72952062-72952081 Msa0223410:intron 30.0%
!!! TGATGGTAGTTATTTTTGTG+TGG - chr2_1:72952177-72952196 Msa0223410:intron 30.0%
TCCAGATAAAAATATAGGGA+GGG + chr2_1:72952205-72952224 None:intergenic 30.0%
ATCCAGATAAAAATATAGGG+AGG + chr2_1:72952206-72952225 None:intergenic 30.0%
!! ATTTGGTTAGTTTGTCCATT+TGG - chr2_1:72952283-72952302 Msa0223410:CDS 30.0%
!! TGTATTTTGGATTGCTAAGT+TGG - chr2_1:72952378-72952397 Msa0223410:CDS 30.0%
! ATTTTTCCAGAGCTCTATAT+TGG + chr2_1:72952451-72952470 None:intergenic 30.0%
AAATGATATACAGGATGGTT+TGG + chr2_1:72952495-72952514 None:intergenic 30.0%
AAACCATCCTGTATATCATT+TGG - chr2_1:72952494-72952513 Msa0223410:CDS 30.0%
AACCATCCTGTATATCATTT+GGG - chr2_1:72952495-72952514 Msa0223410:CDS 30.0%
AAACTACCCAAATGATATAC+AGG + chr2_1:72952504-72952523 None:intergenic 30.0%
TGTATATCATTTGGGTAGTT+TGG - chr2_1:72952503-72952522 Msa0223410:CDS 30.0%
GAATAGTGTAATGAAGATGA+GGG + chr2_1:72952585-72952604 None:intergenic 30.0%
AGAATAGTGTAATGAAGATG+AGG + chr2_1:72952586-72952605 None:intergenic 30.0%
! TGTTGTTTAGTCATGGTAAA+TGG + chr2_1:72952644-72952663 None:intergenic 30.0%
AAAATATTAAAACAAGGGGG+GGG + chr2_1:72952757-72952776 None:intergenic 30.0%
! ATATATATAGGGAGCATATC+CGG - chr2_1:72952973-72952992 Msa0223410:intron 30.0%
!! TATAAGATATTGGTTCTCAC+CGG + chr2_1:72952995-72953014 None:intergenic 30.0%
GAAACGAGAACTATCTATAT+CGG - chr2_1:72953018-72953037 Msa0223410:intron 30.0%
AACAAATTGAGCTACAATCT+TGG - chr2_1:72953120-72953139 Msa0223410:intron 30.0%
TTCCTCTTCTCCAAATAATT+AGG - chr2_1:72953159-72953178 Msa0223410:intron 30.0%
AACCTAATTATTTGGAGAAG+AGG + chr2_1:72953164-72953183 None:intergenic 30.0%
! CAAGATTGAGAAATTTCTAG+CGG + chr2_1:72953280-72953299 None:intergenic 30.0%
! AAAGGTTTGAGATTTGGAAA+TGG - chr2_1:72953404-72953423 Msa0223410:intron 30.0%
! AGAAAGCGTAAAATCTAATC+TGG - chr2_1:72953448-72953467 Msa0223410:intron 30.0%
! CAATTACACGGTATGTTTTA+AGG - chr2_1:72953550-72953569 Msa0223410:intron 30.0%
ATATATTGCTGAAACCCAAT+TGG - chr2_1:72953658-72953677 Msa0223410:intron 30.0%
! CAAGTCTAAACTAGGTTTTT+GGG - chr2_1:72953781-72953800 Msa0223410:intron 30.0%
! AAGTCTAAACTAGGTTTTTG+GGG - chr2_1:72953782-72953801 Msa0223410:intron 30.0%
TGTAAACATATTCAGGAAAC+AGG - chr2_1:72953964-72953983 Msa0223410:intron 30.0%
GTAAACATATTCAGGAAACA+GGG - chr2_1:72953965-72953984 Msa0223410:intron 30.0%
ACAAACAGAACAAAAACACA+AGG + chr2_1:72954030-72954049 None:intergenic 30.0%
! TCACTATGTTGATTACTTGT+TGG - chr2_1:72954055-72954074 Msa0223410:intron 30.0%
! TTGATTACTTGTTGGAAAGT+TGG - chr2_1:72954063-72954082 Msa0223410:intron 30.0%
!! GGTTAAATGTTGCTTTGATT+TGG - chr2_1:72954215-72954234 Msa0223410:intron 30.0%
ATTCTATATACCGAGAAAAG+AGG + chr2_1:72954345-72954364 None:intergenic 30.0%
GTAACACATTATGTCATGAT+GGG + chr2_1:72954390-72954409 None:intergenic 30.0%
TACATGACATGCATTATGTT+AGG + chr2_1:72954667-72954686 None:intergenic 30.0%
! ATGTCATGTATTGAGTTGTA+AGG - chr2_1:72954677-72954696 Msa0223410:intron 30.0%
!! TTCTGCACTAGTATTTTTGT+TGG - chr2_1:72954738-72954757 Msa0223410:intron 30.0%
! CTCCTTTTACCTATACTTAT+TGG - chr2_1:72954762-72954781 Msa0223410:intron 30.0%
GTCCAATAAGTATAGGTAAA+AGG + chr2_1:72954767-72954786 None:intergenic 30.0%
AAGATCGTGGACATATTTAA+AGG + chr2_1:72954829-72954848 None:intergenic 30.0%
TATTCAAAACAATGGAAGCA+TGG + chr2_1:72955193-72955212 None:intergenic 30.0%
CACGGTAATATTCAAAACAA+TGG + chr2_1:72955201-72955220 None:intergenic 30.0%
GAGCAAGCAAATACAAAAAT+GGG + chr2_1:72955440-72955459 None:intergenic 30.0%
AGAGCAAGCAAATACAAAAA+TGG + chr2_1:72955441-72955460 None:intergenic 30.0%
CTTCAACTTCAACCTAAAAT+AGG - chr2_1:72955463-72955482 Msa0223410:intron 30.0%
ACTTCAACCTAAAATAGGAA+AGG - chr2_1:72955468-72955487 Msa0223410:intron 30.0%
CTTCAACCTAAAATAGGAAA+GGG - chr2_1:72955469-72955488 Msa0223410:intron 30.0%
TTCAGTTGGTTATCAAGAAA+CGG + chr2_1:72955577-72955596 None:intergenic 30.0%
!!! GTATTTTGACTTTGCAAAAC+AGG + chr2_1:72955921-72955940 None:intergenic 30.0%
!! ACAAGCTTTAAACTTGCTTT+GGG - chr2_1:72956050-72956069 Msa0223410:intron 30.0%
!! TTTGGGTGTATGTTTTTACA+GGG - chr2_1:72956067-72956086 Msa0223410:intron 30.0%
ATAGACCACATTCAGAATTT+AGG + chr2_1:72956225-72956244 None:intergenic 30.0%
ACGTGGAAAGAAAGAAACTA+AGG - chr2_1:72951383-72951402 Msa0223410:three_prime_UTR 35.0%
ATAGAATGAAAGTCTCACCA+CGG + chr2_1:72951533-72951552 None:intergenic 35.0%
AGAAAGATCGAAATTCACTC+AGG + chr2_1:72951580-72951599 None:intergenic 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG - chr2_1:72951830-72951849 Msa0223410:intron 35.0%
TTTACTGGTATAAGCACTTC+AGG + chr2_1:72951892-72951911 None:intergenic 35.0%
AGCACCACAAGTATTCATAT+TGG + chr2_1:72952021-72952040 None:intergenic 35.0%
!!! GTGGGTGGGAATTTTATTTT+TGG - chr2_1:72952125-72952144 Msa0223410:CDS 35.0%
!!! TTGGTTTTTTTCTCATGGCT+TGG - chr2_1:72952144-72952163 Msa0223410:CDS 35.0%
!! TCCCTCCCTATATTTTTATC+TGG - chr2_1:72952201-72952220 Msa0223410:intron 35.0%
!!! GTTCATTGCCTCTGTTTTTT+TGG - chr2_1:72952319-72952338 Msa0223410:CDS 35.0%
!! ATATACAGGATGGTTTGGTT+CGG + chr2_1:72952490-72952509 None:intergenic 35.0%
TACCCAAATGATATACAGGA+TGG + chr2_1:72952500-72952519 None:intergenic 35.0%
! ATGAAGATGAGGGTATACAA+GGG + chr2_1:72952575-72952594 None:intergenic 35.0%
! AATGAAGATGAGGGTATACA+AGG + chr2_1:72952576-72952595 None:intergenic 35.0%
TTAGTCATGGTAAATGGAAC+TGG + chr2_1:72952638-72952657 None:intergenic 35.0%
!! ATTAGCGTGTTGTTTAGTCA+TGG + chr2_1:72952651-72952670 None:intergenic 35.0%
TGACTAAACAACACGCTAAT+TGG - chr2_1:72952651-72952670 Msa0223410:intron 35.0%
! AGCTTACAAGTGAGAGATTT+TGG + chr2_1:72952909-72952928 None:intergenic 35.0%
CTTTCTTGAAAGAGAGCAAA+AGG + chr2_1:72953247-72953266 None:intergenic 35.0%
! GAACGATTATCAATTTGGTG+AGG + chr2_1:72953308-72953327 None:intergenic 35.0%
!! TAGTGTTACTTGCTGATTTG+AGG - chr2_1:72953380-72953399 Msa0223410:intron 35.0%
!! TACTTGCTGATTTGAGGAAA+AGG - chr2_1:72953386-72953405 Msa0223410:intron 35.0%
! TGAGGAAAAGGTTTGAGATT+TGG - chr2_1:72953398-72953417 Msa0223410:intron 35.0%
AAAGATGCCAAGTCTAAACT+AGG - chr2_1:72953773-72953792 Msa0223410:intron 35.0%
CCAAAAACCTAGTTTAGACT+TGG + chr2_1:72953783-72953802 None:intergenic 35.0%
! CCAAGTCTAAACTAGGTTTT+TGG - chr2_1:72953780-72953799 Msa0223410:intron 35.0%
!! TAAACTGAGAGTATTCCTCT+AGG - chr2_1:72954193-72954212 Msa0223410:intron 35.0%
!! AAACTGAGAGTATTCCTCTA+GGG - chr2_1:72954194-72954213 Msa0223410:intron 35.0%
AAAGCAACATTTAACCCTAG+AGG + chr2_1:72954211-72954230 None:intergenic 35.0%
GGTTTATTTATAGACTGCCA+TGG - chr2_1:72954309-72954328 Msa0223410:intron 35.0%
! TAACCGAAAACCTCTTTTCT+CGG - chr2_1:72954332-72954351 Msa0223410:intron 35.0%
! ATACCGAGAAAAGAGGTTTT+CGG + chr2_1:72954338-72954357 None:intergenic 35.0%
CGTAACACATTATGTCATGA+TGG + chr2_1:72954391-72954410 None:intergenic 35.0%
TTTCTATTCCATTCAGCTCT+TGG - chr2_1:72954638-72954657 Msa0223410:intron 35.0%
TTCTATTCCATTCAGCTCTT+GGG - chr2_1:72954639-72954658 Msa0223410:intron 35.0%
AGAAATGATAAGCAGGATTG+AGG - chr2_1:72955006-72955025 Msa0223410:CDS 35.0%
GAAATGATAAGCAGGATTGA+GGG - chr2_1:72955007-72955026 Msa0223410:CDS 35.0%
AAATGATAAGCAGGATTGAG+GGG - chr2_1:72955008-72955027 Msa0223410:CDS 35.0%
ATTGAGGGGAAAGTAAAAAC+TGG - chr2_1:72955022-72955041 Msa0223410:CDS 35.0%
TATTCTTTCAATGTGTTGGG+CGG - chr2_1:72955365-72955384 Msa0223410:intron 35.0%
! ACACATCCCTTTCCTATTTT+AGG + chr2_1:72955478-72955497 None:intergenic 35.0%
CACATTCATACTTGCAGAAT+TGG - chr2_1:72955849-72955868 Msa0223410:intron 35.0%
ATTTCGACTGCAGAAAATTG+TGG - chr2_1:72955996-72956015 Msa0223410:intron 35.0%
!! GACAAGCTTTAAACTTGCTT+TGG - chr2_1:72956049-72956068 Msa0223410:intron 35.0%
!! CTTTGGGTGTATGTTTTTAC+AGG - chr2_1:72956066-72956085 Msa0223410:intron 35.0%
!! TTGGGTGTATGTTTTTACAG+GGG - chr2_1:72956068-72956087 Msa0223410:intron 35.0%
!! TATGTTTTTACAGGGGGATA+AGG - chr2_1:72956075-72956094 Msa0223410:intron 35.0%
GAAATTGTCATCCTAAATGC+TGG - chr2_1:72956100-72956119 Msa0223410:intron 35.0%
!! AAAAGCATCAGTCTTTCCTT+AGG + chr2_1:72956150-72956169 None:intergenic 35.0%
! AAAGACTGATGCTTTTACAG+AGG - chr2_1:72956154-72956173 Msa0223410:intron 35.0%
!! AGACTTGTTCTGAGAATGTT+TGG - chr2_1:72956193-72956212 Msa0223410:intron 35.0%
AGACTAGAAATAGCGCAAAT+TGG + chr2_1:72956282-72956301 None:intergenic 35.0%
! AGCTAGAGTTGGTTTCATTT+GGG + chr2_1:72956433-72956452 None:intergenic 35.0%
! AAGCTAGAGTTGGTTTCATT+TGG + chr2_1:72956434-72956453 None:intergenic 35.0%
AGTGTGAGTAATATGCAATC+AGG - chr2_1:72956460-72956479 Msa0223410:five_prime_UTR 35.0%
GAAAAAATGTCCAGGACAAT+TGG + chr2_1:72956493-72956512 None:intergenic 35.0%
! TTCAAATTTTGGACGAAGGG+TGG - chr2_1:72952066-72952085 Msa0223410:intron 40.0%
! TCAAATTTTGGACGAAGGGT+GGG - chr2_1:72952067-72952086 Msa0223410:intron 40.0%
! GGAAGTAGCTAGGTTTTCTT+GGG - chr2_1:72952103-72952122 Msa0223410:CDS 40.0%
!! TTTTCTCATGGCTTGGATGT+TGG - chr2_1:72952151-72952170 Msa0223410:intron 40.0%
ACTTAGCAACTCAAGCCAAA+TGG + chr2_1:72952301-72952320 None:intergenic 40.0%
GCACTTCACCAAAAAAACAG+AGG + chr2_1:72952330-72952349 None:intergenic 40.0%
TGGTCTCCATATGACAACAA+TGG - chr2_1:72952671-72952690 Msa0223410:intron 40.0%
TCTCCATATGACAACAATGG+AGG - chr2_1:72952674-72952693 Msa0223410:intron 40.0%
CTCCATATGACAACAATGGA+GGG - chr2_1:72952675-72952694 Msa0223410:intron 40.0%
TACCCTCCATTGTTGTCATA+TGG + chr2_1:72952680-72952699 None:intergenic 40.0%
!!! TTTTGGAGTAATCACGAGTG+AGG + chr2_1:72952892-72952911 None:intergenic 40.0%
AAATGTGTGATGGCTTCTTC+TGG - chr2_1:72953834-72953853 Msa0223410:intron 40.0%
!! TGGTTTTCAAGCTGATGTGA+AGG - chr2_1:72953854-72953873 Msa0223410:intron 40.0%
AACATATTCAGGAAACAGGG+TGG - chr2_1:72953968-72953987 Msa0223410:intron 40.0%
! AAGCAGTGTTGAGCATTTGA+TGG - chr2_1:72954288-72954307 Msa0223410:intron 40.0%
! AAAGAGGTTTTCGGTTACCA+TGG + chr2_1:72954329-72954348 None:intergenic 40.0%
AGTAGCAACTCTAATGCGAA+GGG - chr2_1:72954556-72954575 Msa0223410:intron 40.0%
AGAAAAGATGGCAAAGATCG+TGG + chr2_1:72954842-72954861 None:intergenic 40.0%
! CAAAACAATGGAAGCATGGA+AGG + chr2_1:72955189-72955208 None:intergenic 40.0%
AAAGCAATTGAGCCATTGCA+GGG + chr2_1:72955310-72955329 None:intergenic 40.0%
GTCTTCACTTATGATGCTGT+TGG - chr2_1:72955496-72955515 Msa0223410:intron 40.0%
AAGAAACGGCATAATGAGAG+TGG + chr2_1:72955563-72955582 None:intergenic 40.0%
CCAATTCAAGAACTTCACCT+GGG + chr2_1:72955626-72955645 None:intergenic 40.0%
ACCAATTCAAGAACTTCACC+TGG + chr2_1:72955627-72955646 None:intergenic 40.0%
CTGCAAGTATGAATGTGTGA+AGG + chr2_1:72955846-72955865 None:intergenic 40.0%
TTCAACCGCCTGATCTTAAT+AGG + chr2_1:72955951-72955970 None:intergenic 40.0%
!! TGGGTGTATGTTTTTACAGG+GGG - chr2_1:72956069-72956088 Msa0223410:intron 40.0%
ATTGTCATCCTAAATGCTGG+TGG - chr2_1:72956103-72956122 Msa0223410:intron 40.0%
GATGAATACCACCAGCATTT+AGG + chr2_1:72956114-72956133 None:intergenic 40.0%
TGGTATTCATCGTGAGTTCA+TGG - chr2_1:72956123-72956142 Msa0223410:intron 40.0%
GTGCTCCTAAATTCTGAATG+TGG - chr2_1:72956217-72956236 Msa0223410:intron 40.0%
!! TTGGAAAGCATTCCTCGATT+TGG + chr2_1:72956263-72956282 None:intergenic 40.0%
!! TTGTGGTGCTGTGAAATGTG+TGG - chr2_1:72952031-72952050 Msa0223410:intron 45.0%
! GGGAAGTAGCTAGGTTTTCT+TGG - chr2_1:72952102-72952121 Msa0223410:CDS 45.0%
! AGTAGCTAGGTTTTCTTGGG+TGG - chr2_1:72952106-72952125 Msa0223410:CDS 45.0%
! GTAGCTAGGTTTTCTTGGGT+GGG - chr2_1:72952107-72952126 Msa0223410:CDS 45.0%
TTGGAGCCAATATAGAGCTC+TGG - chr2_1:72952442-72952461 Msa0223410:intron 45.0%
! TGGGTAGTTTGGTTCGTGTA+AGG - chr2_1:72952514-72952533 Msa0223410:CDS 45.0%
AGATCTTGTGTCGCAATTGC+TGG - chr2_1:72952812-72952831 Msa0223410:intron 45.0%
TTGTGTCGCAATTGCTGGAT+CGG - chr2_1:72952817-72952836 Msa0223410:intron 45.0%
ACGAGTGAGGATGTTGTAAC+CGG + chr2_1:72952879-72952898 None:intergenic 45.0%
CAGAGCTGAGAAATGTGTGA+TGG - chr2_1:72953824-72953843 Msa0223410:intron 45.0%
TGATGTGAAGGCTTTGCAGA+AGG - chr2_1:72953866-72953885 Msa0223410:intron 45.0%
!! TGCAGAAGGTTTTGTCTGCT+AGG - chr2_1:72953880-72953899 Msa0223410:intron 45.0%
!! GGTTTTGTCTGCTAGGCATT+TGG - chr2_1:72953887-72953906 Msa0223410:intron 45.0%
GAGTAGCAACTCTAATGCGA+AGG - chr2_1:72954555-72954574 Msa0223410:intron 45.0%
GTAGCAACTCTAATGCGAAG+GGG - chr2_1:72954557-72954576 Msa0223410:intron 45.0%
TAATGCGAAGGGGAAACTCT+TGG - chr2_1:72954567-72954586 Msa0223410:intron 45.0%
TTAGGAACCCAAGAGCTGAA+TGG + chr2_1:72954649-72954668 None:intergenic 45.0%
GAAAGCAATTGAGCCATTGC+AGG + chr2_1:72955311-72955330 None:intergenic 45.0%
ATAGCTCACCTTCACTGTCA+AGG + chr2_1:72955391-72955410 None:intergenic 45.0%
!! ATGCTGTTGGTTCCTATGAG+AGG - chr2_1:72955509-72955528 Msa0223410:intron 45.0%
!! TGCTGTTGGTTCCTATGAGA+GGG - chr2_1:72955510-72955529 Msa0223410:intron 45.0%
CCCAGGTGAAGTTCTTGAAT+TGG - chr2_1:72955623-72955642 Msa0223410:intron 45.0%
TGCTTCAGACAGTGGAGTAA+CGG + chr2_1:72955729-72955748 None:intergenic 45.0%
TGAAGCAGAAGCAGTTGATC+TGG - chr2_1:72955742-72955761 Msa0223410:intron 45.0%
CAAGCCGTCCTATTAAGATC+AGG - chr2_1:72955940-72955959 Msa0223410:intron 45.0%
ACCGCCTGATCTTAATAGGA+CGG + chr2_1:72955947-72955966 None:intergenic 45.0%
AATCTCGTGACTGTGAATGC+AGG - chr2_1:72955970-72955989 Msa0223410:intron 45.0%
ATCTCGTGACTGTGAATGCA+GGG - chr2_1:72955971-72955990 Msa0223410:intron 45.0%
ATCGTGAGTTCATGGACCTA+AGG - chr2_1:72956131-72956150 Msa0223410:intron 45.0%
!! ATTCCTCGATTTGGCTTAGG+GGG + chr2_1:72956254-72956273 None:intergenic 45.0%
!! CATTCCTCGATTTGGCTTAG+GGG + chr2_1:72956255-72956274 None:intergenic 45.0%
!! GCATTCCTCGATTTGGCTTA+GGG + chr2_1:72956256-72956275 None:intergenic 45.0%
!! AGCATTCCTCGATTTGGCTT+AGG + chr2_1:72956257-72956276 None:intergenic 45.0%
CACTACTGCAAAGCTAGAGT+TGG + chr2_1:72956444-72956463 None:intergenic 45.0%
!! AAAAAAAAAAAAAAAAAAAC+GGG + chr2_1:72953203-72953222 None:intergenic 5.0%
!! ATTAATATAACAAAATATTT+AGG + chr2_1:72956405-72956424 None:intergenic 5.0%
GAATGAAAGTCTCACCACGG+CGG + chr2_1:72951530-72951549 None:intergenic 50.0%
! CTAGGTTTTCTTGGGTGGGT+GGG - chr2_1:72952111-72952130 Msa0223410:CDS 50.0%
GGCTTGGATGTTGGAGATGA+TGG - chr2_1:72952160-72952179 Msa0223410:intron 50.0%
!! GGATGGTTTGGTTCGGAATG+TGG + chr2_1:72952483-72952502 None:intergenic 50.0%
!! AGGGTATACAAGGGTGTCAC+GGG + chr2_1:72952566-72952585 None:intergenic 50.0%
!! GAGGGTATACAAGGGTGTCA+CGG + chr2_1:72952567-72952586 None:intergenic 50.0%
GTGTGATCGCAGCTGATACA+AGG - chr2_1:72952846-72952865 Msa0223410:intron 50.0%
GCTGATACAAGGATGTCCAC+CGG - chr2_1:72952857-72952876 Msa0223410:intron 50.0%
AGTGAGGATGTTGTAACCGG+TGG + chr2_1:72952876-72952895 None:intergenic 50.0%
!! TGTTGGTTCCTATGAGAGGG+TGG - chr2_1:72955513-72955532 Msa0223410:intron 50.0%
! GTTGGTTCCTATGAGAGGGT+GGG - chr2_1:72955514-72955533 Msa0223410:intron 50.0%
GCTATATCCCACCCTCTCAT+AGG + chr2_1:72955524-72955543 None:intergenic 50.0%
AGGGTGGGATATAGCTCTCA+GGG - chr2_1:72955529-72955548 Msa0223410:intron 50.0%
GGATATAGCTCTCAGGGTTC+TGG - chr2_1:72955535-72955554 Msa0223410:intron 50.0%
TTCAAGAACTTCACCTGGGC+AGG + chr2_1:72955622-72955641 None:intergenic 50.0%
ACTGCTTCTGCTTCAGACAG+TGG + chr2_1:72955737-72955756 None:intergenic 50.0%
GCCGTCCTATTAAGATCAGG+CGG - chr2_1:72955943-72955962 Msa0223410:intron 50.0%
!! AGGAGTGCTACCAATTGTCC+TGG - chr2_1:72956480-72956499 Msa0223410:five_prime_UTR 50.0%
ATTCGGAACGCGGTGGTTCT+GGG + chr2_1:72951477-72951496 None:intergenic 55.0%
ACCGCGTTCCGAATCGTTTC+CGG - chr2_1:72951483-72951502 Msa0223410:three_prime_UTR 55.0%
TGTGGTGGCCGGAAACGATT+CGG + chr2_1:72951494-72951513 None:intergenic 55.0%
AAAGCTAGGACTGTGGTGGC+CGG + chr2_1:72951505-72951524 None:intergenic 55.0%
GGAGAAAGCTAGGACTGTGG+TGG + chr2_1:72951509-72951528 None:intergenic 55.0%
GAAGGGTGGGACTGCTCTTT+GGG - chr2_1:72952080-72952099 Msa0223410:CDS 55.0%
AAGGGTGGGACTGCTCTTTG+GGG - chr2_1:72952081-72952100 Msa0223410:CDS 55.0%
! GCTCTTTGGGGGAAGTAGCT+AGG - chr2_1:72952093-72952112 Msa0223410:CDS 55.0%
! GCTAGGTTTTCTTGGGTGGG+TGG - chr2_1:72952110-72952129 Msa0223410:CDS 55.0%
!! CAAGGGTGTCACGGGTGATA+GGG + chr2_1:72952558-72952577 None:intergenic 55.0%
!! ACAAGGGTGTCACGGGTGAT+AGG + chr2_1:72952559-72952578 None:intergenic 55.0%
AAAACAAGGGGGGGGAGAGA+GGG + chr2_1:72952749-72952768 None:intergenic 55.0%
TAAAACAAGGGGGGGGAGAG+AGG + chr2_1:72952750-72952769 None:intergenic 55.0%
TGCGAAGGGGAAACTCTTGG+AGG - chr2_1:72954570-72954589 Msa0223410:intron 55.0%
GAGGGTGGGATATAGCTCTC+AGG - chr2_1:72955528-72955547 Msa0223410:intron 55.0%
ACTTCACCTGGGCAGGTAAG+AGG + chr2_1:72955615-72955634 None:intergenic 55.0%
TTGCCCCCTAAGCCAAATCG+AGG - chr2_1:72956248-72956267 Msa0223410:intron 55.0%
!! GCGGTGGTTCTGGGTGGTTA+GGG + chr2_1:72951468-72951487 None:intergenic 60.0%
GATTCGGAACGCGGTGGTTC+TGG + chr2_1:72951478-72951497 None:intergenic 60.0%
! GGAAACGATTCGGAACGCGG+TGG + chr2_1:72951484-72951503 None:intergenic 60.0%
! GCCGGAAACGATTCGGAACG+CGG + chr2_1:72951487-72951506 None:intergenic 60.0%
GGCGGAGAAAGCTAGGACTG+TGG + chr2_1:72951512-72951531 None:intergenic 60.0%
! AGTCCTAGCTTTCTCCGCCG+TGG - chr2_1:72951513-72951532 Msa0223410:three_prime_UTR 60.0%
TCACCACGGCGGAGAAAGCT+AGG + chr2_1:72951519-72951538 None:intergenic 60.0%
CGAAGGGTGGGACTGCTCTT+TGG - chr2_1:72952079-72952098 Msa0223410:CDS 60.0%
AGGGTGGGACTGCTCTTTGG+GGG - chr2_1:72952082-72952101 Msa0223410:CDS 60.0%
GCAGATGAGCTGCCCTGCAA+TGG - chr2_1:72955295-72955314 Msa0223410:intron 60.0%
TTGGGCGGCCTTGACAGTGA+AGG - chr2_1:72955380-72955399 Msa0223410:intron 60.0%
!! AGGTAAGAGGAGTGGGCTGG+GGG + chr2_1:72955602-72955621 None:intergenic 60.0%
!! CAGGTAAGAGGAGTGGGCTG+GGG + chr2_1:72955603-72955622 None:intergenic 60.0%
! GCAGGTAAGAGGAGTGGGCT+GGG + chr2_1:72955604-72955623 None:intergenic 60.0%
CCTGGGCAGGTAAGAGGAGT+GGG + chr2_1:72955609-72955628 None:intergenic 60.0%
ACCTGGGCAGGTAAGAGGAG+TGG + chr2_1:72955610-72955629 None:intergenic 60.0%
!! CGCGGTGGTTCTGGGTGGTT+AGG + chr2_1:72951469-72951488 None:intergenic 65.0%
!! GTGGGCTGGGGGACTTCAGT+TGG + chr2_1:72955591-72955610 None:intergenic 65.0%
GGCAGGTAAGAGGAGTGGGC+TGG + chr2_1:72955605-72955624 None:intergenic 65.0%
CCCACTCCTCTTACCTGCCC+AGG - chr2_1:72955606-72955625 Msa0223410:intron 65.0%
!! CGGAACGCGGTGGTTCTGGG+TGG + chr2_1:72951474-72951493 None:intergenic 70.0%
GGGGGGGAGAGAGGGAGAGA+GGG + chr2_1:72952741-72952760 None:intergenic 70.0%
GGGGGGGGAGAGAGGGAGAG+AGG + chr2_1:72952742-72952761 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 72951374 72956512 72951374 ID=Msa0223410;Name=Msa0223410
chr2_1 mRNA 72951374 72956512 72951374 ID=Msa0223410-mRNA-1;Parent=Msa0223410;Name=Msa0223410-mRNA-1;_AED=0.05;_eAED=0.05;_QI=172|1|1|1|0.71|0.87|8|350|223
chr2_1 exon 72951374 72951798 72951374 ID=Msa0223410-mRNA-1:exon:21229;Parent=Msa0223410-mRNA-1
chr2_1 exon 72952078 72952164 72952078 ID=Msa0223410-mRNA-1:exon:21228;Parent=Msa0223410-mRNA-1
chr2_1 exon 72952259 72952401 72952259 ID=Msa0223410-mRNA-1:exon:21227;Parent=Msa0223410-mRNA-1
chr2_1 exon 72952485 72952614 72952485 ID=Msa0223410-mRNA-1:exon:21226;Parent=Msa0223410-mRNA-1
chr2_1 exon 72953978 72954059 72953978 ID=Msa0223410-mRNA-1:exon:21225;Parent=Msa0223410-mRNA-1
chr2_1 exon 72954965 72955072 72954965 ID=Msa0223410-mRNA-1:exon:21224;Parent=Msa0223410-mRNA-1
chr2_1 exon 72955190 72955247 72955190 ID=Msa0223410-mRNA-1:exon:21223;Parent=Msa0223410-mRNA-1
chr2_1 exon 72956352 72956512 72956352 ID=Msa0223410-mRNA-1:exon:21222;Parent=Msa0223410-mRNA-1
chr2_1 five_prime_UTR 72956352 72956512 72956352 ID=Msa0223410-mRNA-1:five_prime_utr;Parent=Msa0223410-mRNA-1
chr2_1 five_prime_UTR 72955237 72955247 72955237 ID=Msa0223410-mRNA-1:five_prime_utr;Parent=Msa0223410-mRNA-1
chr2_1 CDS 72955190 72955236 72955190 ID=Msa0223410-mRNA-1:cds;Parent=Msa0223410-mRNA-1
chr2_1 CDS 72954965 72955072 72954965 ID=Msa0223410-mRNA-1:cds;Parent=Msa0223410-mRNA-1
chr2_1 CDS 72953978 72954059 72953978 ID=Msa0223410-mRNA-1:cds;Parent=Msa0223410-mRNA-1
chr2_1 CDS 72952485 72952614 72952485 ID=Msa0223410-mRNA-1:cds;Parent=Msa0223410-mRNA-1
chr2_1 CDS 72952259 72952401 72952259 ID=Msa0223410-mRNA-1:cds;Parent=Msa0223410-mRNA-1
chr2_1 CDS 72952078 72952164 72952078 ID=Msa0223410-mRNA-1:cds;Parent=Msa0223410-mRNA-1
chr2_1 CDS 72951724 72951798 72951724 ID=Msa0223410-mRNA-1:cds;Parent=Msa0223410-mRNA-1
chr2_1 three_prime_UTR 72951374 72951723 72951374 ID=Msa0223410-mRNA-1:three_prime_utr;Parent=Msa0223410-mRNA-1
Gene Sequence

>Msa0223410

ATGACTAAACAACACGCTAATTGGTCTCCATATGACAACAATGGAGGATCTTGTGTCGCAATTGCTGGATCGGATTACTGTGTGATCGCAGCTGATACAAGGATGTCCACCGGTTACAACATCCTCACTCGTGATTACTCCAAAATCTCTCACTTAGCTGAGAAATGTGTGATGGCTTCTTCTGGTTTTCAAGCTGATGTGAAGGCTTTGCAGAAGGTTTTGTCTGCTAGGCATTTGACTTATCAGCATCAACACAACAAGCAGATGAGCTGCCCTGCAATGGCTCAATTGCTTTCAAACACACTTTATTACAAACGCTTCTTTCCTTACTATTCTTTCAATGTGTTGGGCGGCCTTGACAGTGAAGGAAAGGGATGTGTCTTCACTTATGATGCTGTTGGTTCCTATGAGAGGGTGGGATATAGCTCTCAGGGTTCTGGCTCCACTCTCATTATGCCGTTTCTTGATAACCAACTGAAGTCCCCCAGCCCACTCCTCTTACCTGCCCAGGATGCCGTTACTCCACTGTCTGAAGCAGAAGCAGTTGATCTGGTCAAAACTGTTTTTGCGTCTGCAACTGAGAGAGATATATACACTGGGGATAAGGTTGAAATTGTCATCCTAAATGCTGGTGGTATTCATCGTGAGTTCATGGACCTAAGGAAAGACTGA

Protein sequence

>Msa0223410

MTKQHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVILNAGGIHREFMDLRKD*