AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0579390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0579390 MtrunA17_Chr4g0043041 96.130 956 29 3 1 954 1 950 0.0 1896
Msa0579390 MtrunA17_Chr6g0454411 74.283 906 202 8 56 954 65 946 0.0 1393
Msa0579390 MtrunA17_Chr3g0103771 65.104 384 127 3 573 956 435 811 3.83e-176 533
Msa0579390 MtrunA17_Chr3g0103771 55.921 456 195 3 72 527 19 468 9.08e-175 530
Msa0579390 MtrunA17_Chr2g0282731 48.434 415 202 5 80 491 183 588 3.45e-121 393
Msa0579390 MtrunA17_Chr2g0282731 50.000 378 175 6 580 956 595 959 3.75e-114 374
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0579390 AT3G29320.1 69.772 923 229 8 41 954 50 931 0.0 1335
Msa0579390 AT3G46970.1 64.844 384 128 3 573 956 436 812 1.34e-177 537
Msa0579390 AT3G46970.1 54.697 479 204 5 52 527 1 469 4.02e-175 531

Find 256 sgRNAs with CRISPR-Local

Find 506 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTTTCTAATTGCTCTTC+TGG 0.206585 4_1:-84038047 None:intergenic
TTCTATGGAGAAGTTATTTC+AGG 0.216727 4_1:+84040459 Msa0579390:CDS
GGTAACTACATGCTGTATTT+TGG 0.229936 4_1:+84037693 Msa0579390:five_prime_UTR
GATCAGGAATGACGGTAAAT+TGG 0.232719 4_1:+84041090 Msa0579390:CDS
CGACGAATTGATGGGATCTT+TGG 0.243497 4_1:+84044969 Msa0579390:CDS
TTCTGTGTGTTTAGTACAGC+TGG 0.244339 4_1:+84044472 Msa0579390:intron
GATTTGAAGGCTTTCAATAC+TGG 0.245062 4_1:+84040618 Msa0579390:CDS
GTGATTCCCTTATCATAAAT+TGG 0.247012 4_1:+84039265 Msa0579390:CDS
TCTTATCCAGTTAGATTCTA+TGG 0.254682 4_1:+84040444 Msa0579390:CDS
ATTTGTACCACCACTTTATC+TGG 0.266367 4_1:-84041122 None:intergenic
AATTACCCTGCATGGGGATA+TGG 0.274456 4_1:+84040135 Msa0579390:CDS
GCAAGCTTATTACATGTCTA+TGG 0.286957 4_1:+84039326 Msa0579390:CDS
AATATAAATATCTTGGTATC+TGG 0.291902 4_1:-84037746 None:intergenic
CATGAAGTTGTTGCTGAGTA+TGG 0.298752 4_1:+84041647 Msa0579390:CDS
TTTAGAGGATGTGGCTAATC+AGG 0.301609 4_1:+84039531 Msa0579390:CDS
GGACCACAATCGCAAGTTTA+TGG 0.313392 4_1:-84040571 None:intergenic
TGCATTCCAATTTATGATAA+GGG 0.315129 4_1:-84039271 None:intergenic
GGTAACAGATCTTGAGAAAT+TGG 0.317053 4_1:+84042324 Msa0579390:CDS
CGAACCATCATTGGCAGGTT+TGG 0.317570 4_1:-84041971 None:intergenic
TTCTTCAGTTGAAACTTTAG+AGG 0.319118 4_1:-84040592 None:intergenic
TGCTGAGGCTCTGAGGAAAC+TGG 0.320911 4_1:+84039501 Msa0579390:CDS
CCCATTCCAAATCAAACATT+TGG 0.324417 4_1:+84037975 Msa0579390:CDS
ATGAATATGCCAGAGATATA+TGG 0.324624 4_1:+84045497 Msa0579390:three_prime_UTR
GACTGGAGGAGAAAGTATTT+TGG 0.329453 4_1:+84040503 Msa0579390:CDS
GACATGTGGAAATAATAAAA+AGG 0.329549 4_1:+84041472 Msa0579390:CDS
AACTGAAGAATTTGATTTGA+AGG 0.329927 4_1:+84040605 Msa0579390:CDS
CAGAAACGGATCCATCTTCT+AGG 0.345198 4_1:-84042250 None:intergenic
TCGCTGCCAAATGTTTGATT+TGG 0.348700 4_1:-84037981 None:intergenic
TTGCATTCCAATTTATGATA+AGG 0.352440 4_1:-84039272 None:intergenic
ATTATTGAATATAAATATCT+TGG 0.353087 4_1:-84037753 None:intergenic
AGTTGCAAAGTAAGCCTTAC+TGG 0.354966 4_1:-84039229 None:intergenic
AGGGCATTGTTAAATGCAAT+TGG 0.355293 4_1:+84039454 Msa0579390:CDS
AAGCTTGGGATATTACTAAA+AGG 0.359212 4_1:+84041222 Msa0579390:CDS
TCTGCATTCCTGAGCTGATT+AGG 0.359974 4_1:+84041165 Msa0579390:CDS
CAGTTCCGCTGCTTTGTCGC+TGG 0.365462 4_1:-84038086 None:intergenic
GTCTTCTGTTCCAATCCATT+TGG 0.366997 4_1:-84042299 None:intergenic
CAAGGACTTCCCTAGCTACT+TGG 0.367893 4_1:+84045035 Msa0579390:CDS
CAGAGTGGATAGAATCAAAA+AGG 0.368398 4_1:+84042616 Msa0579390:CDS
ACCTTATCAGCATCCTCATT+TGG 0.370522 4_1:-84045772 None:intergenic
TTTCATGTTGCTTGTTCCAC+TGG 0.374129 4_1:-84044503 None:intergenic
CCTTCTATTGATTCATCCCC+AGG 0.374631 4_1:-84040990 None:intergenic
CCTTTACTTCTTCAAACCTT+GGG 0.375831 4_1:-84044909 None:intergenic
ATGAATGGATGTGTGCAAAT+TGG 0.376874 4_1:+84044532 Msa0579390:CDS
ACTAGAGAATATTGAGTTGC+CGG 0.377955 4_1:+84041718 Msa0579390:CDS
AGGAGGAAGTTGCTGAAAAC+TGG 0.381174 4_1:+84040208 Msa0579390:CDS
ACTTCTCCATAGAATCTAAC+TGG 0.381745 4_1:-84040450 None:intergenic
CTGAAGAAATTGCAGGGTTA+AGG 0.382529 4_1:+84044629 Msa0579390:CDS
GAATATTGAGTTGCCGGATT+CGG 0.385197 4_1:+84041724 Msa0579390:CDS
GAAACTGGGTTACAATTTAG+AGG 0.387483 4_1:+84039516 Msa0579390:CDS
CCATTCCCAAGGGCTGCATC+TGG 0.392098 4_1:-84040063 None:intergenic
ATAAACTCGACCACCGAATC+CGG 0.400669 4_1:-84041737 None:intergenic
TCCAAATGAGGATGCTGATA+AGG 0.400841 4_1:+84045771 Msa0579390:three_prime_UTR
TGTTGATGATAATGATATAA+AGG 0.401976 4_1:+84041802 Msa0579390:CDS
CATCAATTCGTCGTAGTTGT+AGG 0.404593 4_1:-84044959 None:intergenic
TTCTTGCTTTCTAGACTCCT+TGG 0.404594 4_1:+84040104 Msa0579390:CDS
AAAACAATTGTTTGTTCCTC+GGG 0.409628 4_1:+84043818 Msa0579390:CDS
AGATGCAATGTTTGATGTAC+AGG 0.409770 4_1:+84042698 Msa0579390:CDS
TTTATCTATACCTAATGTGC+TGG 0.410380 4_1:-84044377 None:intergenic
GGCAGCGACAAAACAACATT+TGG 0.412285 4_1:+84037996 Msa0579390:CDS
GAAAACAATTGTTTGTTCCT+CGG 0.412817 4_1:+84043817 Msa0579390:CDS
CGTGCTGATTATTTCCTTGT+TGG 0.415896 4_1:+84045012 Msa0579390:CDS
ATCAGGAATGACGGTAAATT+GGG 0.418725 4_1:+84041091 Msa0579390:CDS
CTCCATTTCTCTAGTGCCTC+TGG 0.422856 4_1:-84041420 None:intergenic
TTCAAAAGATCTCCAATCTC+TGG 0.423187 4_1:-84043936 None:intergenic
GTGAATTGTCCCAGCACATT+AGG 0.424344 4_1:+84044367 Msa0579390:CDS
ACTTCTTCAAACCTTGGGTC+TGG 0.424710 4_1:-84044904 None:intergenic
CTCAATTCTCCATATATCTC+TGG 0.425589 4_1:-84045506 None:intergenic
GTCCATTGCTTAGCTCCATC+TGG 0.426769 4_1:-84040483 None:intergenic
TCAACATCAATTTCCTCAAC+AGG 0.426786 4_1:-84041785 None:intergenic
CTTCATGACAGCGTATGCTT+TGG 0.427119 4_1:-84040649 None:intergenic
GCCTTTACTTCTTCAAACCT+TGG 0.427852 4_1:-84044910 None:intergenic
GAAAGAAGAACGAGTGAAAG+AGG 0.429235 4_1:-84037802 None:intergenic
CTACAACTACGACGAATTGA+TGG 0.429462 4_1:+84044960 Msa0579390:CDS
AAGGATAACATAAGCTCTAC+TGG 0.434141 4_1:-84045690 None:intergenic
TACCAGAGGCACTAGAGAAA+TGG 0.435864 4_1:+84041418 Msa0579390:CDS
GTTGAAATAAGAGAAGAAGT+TGG 0.438273 4_1:+84044574 Msa0579390:CDS
GTTAATCACGATCCAGAGAT+TGG 0.440645 4_1:+84043924 Msa0579390:CDS
AAATTCCAGAATAAAACAAA+TGG 0.446135 4_1:+84042220 Msa0579390:CDS
GTTTAAGCTGGGAGAAAGCT+TGG 0.447465 4_1:+84041207 Msa0579390:CDS
GCTCAGGAATGCAGAGTGTT+GGG 0.447491 4_1:-84041157 None:intergenic
CCAAATGTTTGATTTGGAAT+GGG 0.448607 4_1:-84037975 None:intergenic
ATTTGAAGGCTTTCAATACT+GGG 0.449329 4_1:+84040619 Msa0579390:CDS
GCACGAGCTGAAGAAATTGC+AGG 0.449587 4_1:+84044622 Msa0579390:CDS
ATGGAGTTTGACTCTTCTGC+AGG 0.451498 4_1:+84041437 Msa0579390:CDS
TCACAGTGAGATTGTAAAAG+AGG 0.453012 4_1:+84042048 Msa0579390:CDS
AATTCCAGAATAAAACAAAT+GGG 0.455147 4_1:+84042221 Msa0579390:CDS
AACATGAAATTTGCAATGAA+TGG 0.455487 4_1:+84044517 Msa0579390:CDS
TAGATGTGAAGGGTTTAAGC+TGG 0.457167 4_1:+84041195 Msa0579390:CDS
ACGTATAACGAAGGACGGTC+AGG 0.458652 4_1:+84040188 Msa0579390:CDS
TGAACACAAGTTGTCTCAAC+TGG 0.460163 4_1:+84045240 Msa0579390:three_prime_UTR
GCCCTTGGGAATGGAGGATT+AGG 0.460169 4_1:+84040072 Msa0579390:CDS
TCTCTCAGAATGTTCACAAA+AGG 0.460769 4_1:+84045591 Msa0579390:three_prime_UTR
GCAACACTAACATTGTAATC+AGG 0.461165 4_1:-84044324 None:intergenic
ATCGTTTCTCTGAATTTCCC+AGG 0.466281 4_1:-84040418 None:intergenic
TTCCTCAGAGCCTCAGCATA+AGG 0.466595 4_1:-84039496 None:intergenic
ATGCCTTGTCAACTTCCTCT+TGG 0.467018 4_1:-84045062 None:intergenic
CTACCAGTTTGCAGATAATG+AGG 0.467112 4_1:+84042584 Msa0579390:intron
TCATTTATCAAAGAGAAAAC+AGG 0.468618 4_1:+84042660 Msa0579390:CDS
CAGGAGCCAGATGCAGCCCT+TGG 0.468994 4_1:+84040057 Msa0579390:intron
CCAGATGCAGCCCTTGGGAA+TGG 0.470381 4_1:+84040063 Msa0579390:CDS
TGTACATCAAACATTGCATC+TGG 0.471752 4_1:-84042696 None:intergenic
GCCAAATGTTTGATTTGGAA+TGG 0.475175 4_1:-84037976 None:intergenic
GATGTGTGTTGGTGCAGAAA+TGG 0.476269 4_1:+84045413 Msa0579390:three_prime_UTR
TTAGCCATGCGAACCATCAT+TGG 0.477716 4_1:-84041980 None:intergenic
TTACTGGGCTCAAATTTCTC+AGG 0.477856 4_1:-84039213 None:intergenic
CCTGGGGATGAATCAATAGA+AGG 0.480958 4_1:+84040990 Msa0579390:CDS
GCACGCTTTGAAAAGAGATC+AGG 0.482626 4_1:+84041074 Msa0579390:CDS
ATTAATATCCTAATCAGCTC+AGG 0.483954 4_1:-84041173 None:intergenic
GTTGCTGAAATGCTAATTCC+TGG 0.484765 4_1:+84044342 Msa0579390:CDS
TGATTATTTCCTTGTTGGCA+AGG 0.485154 4_1:+84045017 Msa0579390:CDS
TAGTTTGAATAATCCATCCA+TGG 0.487311 4_1:-84045809 None:intergenic
GGGCATTGTTAAATGCAATT+GGG 0.488583 4_1:+84039455 Msa0579390:CDS
GGTTATATTGTTCCATCCCA+TGG 0.489415 4_1:+84045792 Msa0579390:three_prime_UTR
GGGTTACAATTTAGAGGATG+TGG 0.490297 4_1:+84039522 Msa0579390:CDS
ATTGGGAATTTACAACTCTC+AGG 0.491640 4_1:+84039472 Msa0579390:CDS
TGAGAAATTTGAGCCCAGTA+AGG 0.492541 4_1:+84039215 Msa0579390:CDS
AGCTCAGGAATGCAGAGTGT+TGG 0.492601 4_1:-84041158 None:intergenic
AAAATCATAACCAAATGGAT+TGG 0.492703 4_1:+84042289 Msa0579390:CDS
CCATGCGAACCATCATTGGC+AGG 0.495713 4_1:-84041976 None:intergenic
GTAAAATTCATCACAGATGT+AGG 0.497209 4_1:+84043894 Msa0579390:CDS
CATGTCTATGGAGTATCTAC+AGG 0.498390 4_1:+84039338 Msa0579390:CDS
TGATCCAAACCTGCCAATGA+TGG 0.501005 4_1:+84041967 Msa0579390:CDS
ACGGCAGTTACTGAATATCA+TGG 0.501069 4_1:+84043746 Msa0579390:CDS
TGCTGGGACAATTCACTGCC+AGG 0.501865 4_1:-84044360 None:intergenic
CCCAAGGTTTGAAGAAGTAA+AGG 0.502177 4_1:+84044909 Msa0579390:CDS
GAAAGAAAGAGCAGAAGGAA+AGG 0.502282 4_1:+84044651 Msa0579390:CDS
TATTGAGTTGCCGGATTCGG+TGG 0.502355 4_1:+84041727 Msa0579390:CDS
TCTGTTACATTCTATACCCT+GGG 0.504284 4_1:+84040973 Msa0579390:CDS
GAACTGAAAGAACGACTCAT+TGG 0.504413 4_1:+84038103 Msa0579390:CDS
ATGGCTAACCTATGTGTTGT+TGG 0.505350 4_1:+84041995 Msa0579390:CDS
TCTTGGCACTCCAAGTAGCT+AGG 0.505786 4_1:-84045045 None:intergenic
TTTAAGCTGGGAGAAAGCTT+GGG 0.507352 4_1:+84041208 Msa0579390:CDS
AGCGTATTCATGAATACAAA+CGG 0.507526 4_1:+84043727 Msa0579390:CDS
GGGGATATGGACTTAGATAC+AGG 0.507764 4_1:+84040148 Msa0579390:CDS
TAGGATATTAATAGATGTGA+AGG 0.509727 4_1:+84041184 Msa0579390:CDS
ATGTCAATCTTGAACACAGC+TGG 0.511229 4_1:+84045442 Msa0579390:three_prime_UTR
CAAAGCGTGCAATGATATCC+TGG 0.512626 4_1:-84041061 None:intergenic
ATAACATTATTTCTGTTCTG+TGG 0.512820 4_1:+84037846 Msa0579390:five_prime_UTR
TGCAAATTGGAACTCTCGAT+GGG 0.513093 4_1:+84044545 Msa0579390:CDS
TTAGTAAAATCATAACCAAA+TGG 0.516483 4_1:+84042284 Msa0579390:CDS
AACACTGAATTACCCTGCAT+GGG 0.518781 4_1:+84040128 Msa0579390:CDS
ATTTATAGATGGGAAATCCC+TGG 0.520518 4_1:+84040400 Msa0579390:intron
CGTATAAATTCAGCAGTGAC+CGG 0.523558 4_1:+84045467 Msa0579390:three_prime_UTR
TCTATGGAGAAGTTATTTCA+GGG 0.524340 4_1:+84040460 Msa0579390:CDS
ATCTGTTACATTCTATACCC+TGG 0.525611 4_1:+84040972 Msa0579390:CDS
CAACACTGAATTACCCTGCA+TGG 0.525876 4_1:+84040127 Msa0579390:CDS
GCTTATGATGTTCCAATACC+TGG 0.526685 4_1:+84040531 Msa0579390:CDS
AATGGATTGGAACAGAAGAC+TGG 0.527079 4_1:+84042302 Msa0579390:CDS
TACCATTCTCAACAACCTGC+AGG 0.529812 4_1:+84037930 Msa0579390:CDS
TACCACCACTTTATCTGGAA+GGG 0.530834 4_1:-84041117 None:intergenic
TTTGTGAACATTCTGAGAGA+AGG 0.536330 4_1:-84045588 None:intergenic
AGGAGCCAGATGCAGCCCTT+GGG 0.536797 4_1:+84040058 Msa0579390:intron
TGTGTTTAGTACAGCTGGGA+TGG 0.537168 4_1:+84044477 Msa0579390:intron
GCTAACCTATGTGTTGTTGG+TGG 0.537986 4_1:+84041998 Msa0579390:CDS
TGGCATATTCATGAATAGTC+CGG 0.538204 4_1:-84045486 None:intergenic
ATATTGTTCCATCCCATGGA+TGG 0.538766 4_1:+84045796 Msa0579390:three_prime_UTR
CCACCATAAACTTGCGATTG+TGG 0.538883 4_1:+84040568 Msa0579390:CDS
GAATTGATGGGATCTTTGGA+AGG 0.539315 4_1:+84044973 Msa0579390:CDS
TTGTTTAATGCATAATGCAT+AGG 0.540102 4_1:+84045321 Msa0579390:three_prime_UTR
CTAAGTCCATATCCCCATGC+AGG 0.541539 4_1:-84040141 None:intergenic
GGATCTTTGGAAGGGAATGA+AGG 0.543201 4_1:+84044982 Msa0579390:CDS
GGCCTAATCCTCCATTCCCA+AGG 0.543436 4_1:-84040074 None:intergenic
TAAGGTCGGGATTACAGAAA+CGG 0.543894 4_1:-84042264 None:intergenic
TGCCTGCAGGTTGTTGAGAA+TGG 0.544681 4_1:-84037932 None:intergenic
TTAAGGAAAGAAAGAGCAGA+AGG 0.545172 4_1:+84044646 Msa0579390:CDS
CTTCTATTGATTCATCCCCA+GGG 0.545352 4_1:-84040989 None:intergenic
GACAAACGAGAAGCAGAAGA+TGG 0.548966 4_1:+84041899 Msa0579390:CDS
AATTTCCTCAACAGGATCAT+CGG 0.550548 4_1:-84041777 None:intergenic
AGATGTGAAGGGTTTAAGCT+GGG 0.551577 4_1:+84041196 Msa0579390:CDS
TGCAGTTTGTACCAGACCCA+AGG 0.553369 4_1:+84044893 Msa0579390:intron
GATGGAGCTAAGCAATGGAC+TGG 0.553513 4_1:+84040486 Msa0579390:CDS
GAAGTTATTTCAGGGCCAGA+TGG 0.555318 4_1:+84040468 Msa0579390:CDS
GTAAAGGCATATGTTAGAAG+TGG 0.555712 4_1:+84044925 Msa0579390:CDS
ATTATGCTCAGCCTCTCTCC+AGG 0.555876 4_1:+84041043 Msa0579390:CDS
CTTGGCACTCCAAGTAGCTA+GGG 0.557235 4_1:-84045044 None:intergenic
TTTATAGATGGGAAATCCCT+GGG 0.557702 4_1:+84040401 Msa0579390:intron
ATGGGGTGACACCTAGAAGA+TGG 0.559245 4_1:+84042239 Msa0579390:CDS
TGAATAATCCATCCATGGGA+TGG 0.559784 4_1:-84045804 None:intergenic
CCTGCCAATGATGGTTCGCA+TGG 0.561781 4_1:+84041976 Msa0579390:CDS
GTACCACCACTTTATCTGGA+AGG 0.562027 4_1:-84041118 None:intergenic
TACAACTACGACGAATTGAT+GGG 0.563220 4_1:+84044961 Msa0579390:CDS
GGACTCCCTTCCAGATAAAG+TGG 0.565184 4_1:+84041112 Msa0579390:CDS
CGAAGAAGAAGAAGATGAAG+TGG 0.565544 4_1:+84041871 Msa0579390:CDS
TTGGGAATGGAGGATTAGGC+CGG 0.569055 4_1:+84040076 Msa0579390:CDS
TGCAACGAATTCATTTGAAG+TGG 0.569514 4_1:-84039130 None:intergenic
AGTTTGAATAATCCATCCAT+GGG 0.570978 4_1:-84045808 None:intergenic
AATTTATGATAAGGGAATCA+CGG 0.571565 4_1:-84039263 None:intergenic
CTAGAAAGCAAGAAGCAAGC+CGG 0.574391 4_1:-84040095 None:intergenic
GATGCAGCCCTTGGGAATGG+AGG 0.575620 4_1:+84040066 Msa0579390:CDS
CGGCAGTTACTGAATATCAT+GGG 0.576863 4_1:+84043747 Msa0579390:CDS
TCGATGAACATAATTCTACA+AGG 0.576901 4_1:-84045709 None:intergenic
GAAATTGGCTGTACTTCGCA+AGG 0.577155 4_1:+84042339 Msa0579390:CDS
TCTGTGTGTTTAGTACAGCT+GGG 0.577930 4_1:+84044473 Msa0579390:intron
GGCCAGATGGAGCTAAGCAA+TGG 0.578954 4_1:+84040481 Msa0579390:CDS
GTTGCAAAGTAAGCCTTACT+GGG 0.579338 4_1:-84039228 None:intergenic
TTGGAAGGGAATGAAGGCTA+TGG 0.582974 4_1:+84044988 Msa0579390:CDS
TTTATTATTTCCACATGTCG+AGG 0.583310 4_1:-84041468 None:intergenic
CAACATATGTTCAAGCCAAG+AGG 0.583384 4_1:+84043868 Msa0579390:CDS
TATGGACTTAGATACAGGTA+TGG 0.584953 4_1:+84040153 Msa0579390:CDS
GCAAGTTATTATACGAACCA+TGG 0.585624 4_1:+84045351 Msa0579390:three_prime_UTR
AGGATATTAATAGATGTGAA+GGG 0.588908 4_1:+84041185 Msa0579390:CDS
TAGGGAAGTCCTTGCCAACA+AGG 0.589757 4_1:-84045026 None:intergenic
GCTGAGGCTCTGAGGAAACT+GGG 0.590579 4_1:+84039502 Msa0579390:CDS
GGATTTACTTCCTCGACATG+TGG 0.591364 4_1:+84041458 Msa0579390:CDS
GTTTAGTACAGCTGGGATGG+AGG 0.592504 4_1:+84044480 Msa0579390:intron
TCGTTTCTCTGAATTTCCCA+GGG 0.593399 4_1:-84040417 None:intergenic
TTATCTATACCTAATGTGCT+GGG 0.596409 4_1:-84044376 None:intergenic
CAACATATGAATATTATGAG+AGG 0.596709 4_1:+84039292 Msa0579390:CDS
TCTTGCCGATGATCCTGTTG+AGG 0.596729 4_1:+84041772 Msa0579390:CDS
AAAGGCTTGAAAACTGAGGA+AGG 0.599866 4_1:+84045609 Msa0579390:three_prime_UTR
AATGAAAGAATTGAATGCTG+AGG 0.602638 4_1:+84043791 Msa0579390:CDS
AAGAACTGATTGATGTGTGT+TGG 0.605680 4_1:+84045402 Msa0579390:three_prime_UTR
GCCTAATCCTCCATTCCCAA+GGG 0.606925 4_1:-84040073 None:intergenic
CATAAGCAATACATATGCCA+TGG 0.607841 4_1:-84045368 None:intergenic
AGGGTAATTCAGTGTTGCCA+AGG 0.609943 4_1:-84040121 None:intergenic
TAAGTCCATATCCCCATGCA+GGG 0.610745 4_1:-84040140 None:intergenic
AATTGATGGGATCTTTGGAA+GGG 0.613386 4_1:+84044974 Msa0579390:CDS
GTCCTTATGCTGAGGCTCTG+AGG 0.613621 4_1:+84039494 Msa0579390:CDS
ATGAAGTTGTTGCTGAGTAT+GGG 0.614498 4_1:+84041648 Msa0579390:CDS
GAAGAAGAAGAAGATGAAGT+GGG 0.616994 4_1:+84041872 Msa0579390:CDS
TGAAAAGAGATCAGGAATGA+CGG 0.617393 4_1:+84041082 Msa0579390:CDS
TATAACGAAGGACGGTCAGG+AGG 0.619104 4_1:+84040191 Msa0579390:CDS
AAGTAAGTAACATCAAGTCA+TGG 0.619742 4_1:+84045097 Msa0579390:CDS
TGTCATGAAGAATGCAGAGA+AGG 0.620102 4_1:+84040662 Msa0579390:CDS
AGGTGAGCTTGAATGCCTGC+AGG 0.620576 4_1:-84037945 None:intergenic
CACGAGCTGAAGAAATTGCA+GGG 0.620721 4_1:+84044623 Msa0579390:CDS
AACATATGAATATTATGAGA+GGG 0.623422 4_1:+84039293 Msa0579390:CDS
GATTTGGAATGGGAATGTAA+AGG 0.624865 4_1:-84037965 None:intergenic
GGAGCTAAGCAATGGACTGG+AGG 0.628655 4_1:+84040489 Msa0579390:CDS
TGCAATGATATCCTGGAGAG+AGG 0.629144 4_1:-84041054 None:intergenic
AAGAAGAAGAAGATGAAGTG+GGG 0.630558 4_1:+84041873 Msa0579390:CDS
ATTCAAACAACGTATAACGA+AGG 0.632464 4_1:+84040179 Msa0579390:CDS
ACAGCTGGGATGGAGGCCAG+TGG 0.632889 4_1:+84044487 Msa0579390:CDS
GTGCAAATTGGAACTCTCGA+TGG 0.634864 4_1:+84044544 Msa0579390:CDS
GTGCCAAGAGGAAGTTGACA+AGG 0.636085 4_1:+84045059 Msa0579390:CDS
TTTGAAGGCTTTCAATACTG+GGG 0.639183 4_1:+84040620 Msa0579390:CDS
AGACAACTTGTGTTCAACAC+AGG 0.639630 4_1:-84045233 None:intergenic
ATGGATTGGAACAGAAGACT+GGG 0.645354 4_1:+84042303 Msa0579390:CDS
CCACAATCGCAAGTTTATGG+TGG 0.651435 4_1:-84040568 None:intergenic
ACTCTCAGGTCCTTATGCTG+AGG 0.656696 4_1:+84039486 Msa0579390:CDS
GAAGAAAATGATGATGATGA+CGG 0.656959 4_1:+84041848 Msa0579390:CDS
ATTCCAGAATAAAACAAATG+GGG 0.658074 4_1:+84042222 Msa0579390:CDS
AAACAACGTATAACGAAGGA+CGG 0.658557 4_1:+84040183 Msa0579390:CDS
TGTTGCCAGCGACAAAGCAG+CGG 0.667849 4_1:+84038081 Msa0579390:CDS
CACAAAAGGCTTGAAAACTG+AGG 0.669784 4_1:+84045605 Msa0579390:three_prime_UTR
CAACAAGGAAATAATCAGCA+CGG 0.670194 4_1:-84045011 None:intergenic
TAGCTACTTGGAGTGCCAAG+AGG 0.674127 4_1:+84045047 Msa0579390:CDS
GTGCCTCTGGTAGAACTGTG+TGG 0.675525 4_1:-84041407 None:intergenic
ATGAGGATCTGCAATCAGAG+TGG 0.676696 4_1:+84042601 Msa0579390:CDS
ACACTGAATTACCCTGCATG+GGG 0.680238 4_1:+84040129 Msa0579390:CDS
CTCCCTTCCAGATAAAGTGG+TGG 0.681896 4_1:+84041115 Msa0579390:CDS
AGTTGCTGAAAACTGGCTTG+AGG 0.695370 4_1:+84040215 Msa0579390:CDS
AAAGAACGACTCATTGGACA+AGG 0.698404 4_1:+84038109 Msa0579390:CDS
AAACCACACAGTTCTACCAG+AGG 0.720864 4_1:+84041404 Msa0579390:CDS
CTGTTACATTCTATACCCTG+GGG 0.720986 4_1:+84040974 Msa0579390:CDS
GCAAATTGGAACTCTCGATG+GGG 0.738537 4_1:+84044546 Msa0579390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTGAATATAAATATCT+TGG - chr4_1:84037756-84037775 None:intergenic 10.0%
!!! GATATCTTTTAAATATAAAT+TGG - chr4_1:84041274-84041293 None:intergenic 10.0%
!! TACATTCTAATATATTATTC+AGG + chr4_1:84038185-84038204 Msa0579390:intron 15.0%
!!! ACATTGAAACTTTAAAAATA+TGG - chr4_1:84038660-84038679 None:intergenic 15.0%
!! GATATAATACTAAAAAATCT+TGG - chr4_1:84039034-84039053 None:intergenic 15.0%
!! ATACATTGTACTATAATATT+TGG - chr4_1:84039735-84039754 None:intergenic 15.0%
!!! ATGATTTATATTTGAGATAT+AGG - chr4_1:84040851-84040870 None:intergenic 15.0%
!! ATATCTCAAATATAAATCAT+CGG + chr4_1:84040851-84040870 Msa0579390:intron 15.0%
!! ATTGTTCATATTAACATAAA+AGG - chr4_1:84042116-84042135 None:intergenic 15.0%
!!! TTCAATCTTTTTCTTTTAAA+CGG + chr4_1:84043346-84043365 Msa0579390:intron 15.0%
!!! ATTGTTATTTAAACATCAAA+AGG - chr4_1:84044028-84044047 None:intergenic 15.0%
!! TATTCATTTATTTAACTACT+GGG - chr4_1:84044106-84044125 None:intergenic 15.0%
!! ATATTCATTTATTTAACTAC+TGG - chr4_1:84044107-84044126 None:intergenic 15.0%
!!! GTACTTTCTTAATTATTTTA+TGG + chr4_1:84045740-84045759 Msa0579390:three_prime_UTR 15.0%
!! AATATAAATATCTTGGTATC+TGG - chr4_1:84037749-84037768 None:intergenic 20.0%
!! TATATTAGAATGTAAAGAAG+TGG - chr4_1:84038179-84038198 None:intergenic 20.0%
!! ATAAATCTAACATAAAACCA+TGG - chr4_1:84038348-84038367 None:intergenic 20.0%
!! AATATCTTTCCATGTAAATT+TGG + chr4_1:84038482-84038501 Msa0579390:intron 20.0%
!! GAAATAAAGATTAGTGATTA+TGG + chr4_1:84038525-84038544 Msa0579390:intron 20.0%
!! TTATTAAATCTGAGCTAATA+TGG + chr4_1:84038560-84038579 Msa0579390:intron 20.0%
!! GGAAATGTAATAACTAAATA+CGG + chr4_1:84038615-84038634 Msa0579390:intron 20.0%
!! GAAATGTAATAACTAAATAC+GGG + chr4_1:84038616-84038635 Msa0579390:intron 20.0%
!!! TTTTAATGAATTTCGTTTGA+AGG + chr4_1:84038693-84038712 Msa0579390:intron 20.0%
!! AGGAAACTTGATTTATATAA+AGG - chr4_1:84038811-84038830 None:intergenic 20.0%
!!! TTTTTTTTCTTCTGCAAATA+TGG + chr4_1:84039067-84039086 Msa0579390:intron 20.0%
!! CCAATAAGGAATTAATATTT+AGG - chr4_1:84039094-84039113 None:intergenic 20.0%
!! CCTAAATATTAATTCCTTAT+TGG + chr4_1:84039091-84039110 Msa0579390:intron 20.0%
!! AACATATGAATATTATGAGA+GGG + chr4_1:84039293-84039312 Msa0579390:CDS 20.0%
!! ATTGTTACATGTTTGTTTAA+TGG + chr4_1:84039807-84039826 Msa0579390:intron 20.0%
!! AAAAAAGTGAGAATATTGTT+AGG + chr4_1:84039830-84039849 Msa0579390:intron 20.0%
!!! CTTGCTTTTTTTTTTTTTGA+AGG - chr4_1:84039871-84039890 None:intergenic 20.0%
!!! GTTTTTTTTGTAGTTTTTCT+TGG - chr4_1:84039946-84039965 None:intergenic 20.0%
!!! GAGAAGTTTTTTTTCATTTA+TGG + chr4_1:84040873-84040892 Msa0579390:intron 20.0%
!! AATAATAAAAAGGATAGATG+AGG + chr4_1:84041482-84041501 Msa0579390:CDS 20.0%
!!! TGTTGATGATAATGATATAA+AGG + chr4_1:84041802-84041821 Msa0579390:CDS 20.0%
!!! AGTTTTTAATGAATTTTACG+AGG + chr4_1:84042072-84042091 Msa0579390:CDS 20.0%
!! AAATTCCAGAATAAAACAAA+TGG + chr4_1:84042220-84042239 Msa0579390:CDS 20.0%
!! AATTCCAGAATAAAACAAAT+GGG + chr4_1:84042221-84042240 Msa0579390:CDS 20.0%
!!! ATTTGGTTATGATTTTACTA+AGG - chr4_1:84042285-84042304 None:intergenic 20.0%
!! TTAGTAAAATCATAACCAAA+TGG + chr4_1:84042284-84042303 Msa0579390:CDS 20.0%
!! ATTTAAGAATCCATCATAAA+GGG - chr4_1:84043135-84043154 None:intergenic 20.0%
!! TATTTAAGAATCCATCATAA+AGG - chr4_1:84043136-84043155 None:intergenic 20.0%
!!! TATTTTTTTTATAATCGCCA+TGG + chr4_1:84043206-84043225 Msa0579390:intron 20.0%
!!! TCAATCTTTTTCTTTTAAAC+GGG + chr4_1:84043347-84043366 Msa0579390:intron 20.0%
!!! GCCATATTTTATATTTTCAT+TGG + chr4_1:84043432-84043451 Msa0579390:intron 20.0%
!! GCCAATGAAAATATAAAATA+TGG - chr4_1:84043436-84043455 None:intergenic 20.0%
!!! TTGGCTAGATATAATATTTT+TGG + chr4_1:84043451-84043470 Msa0579390:intron 20.0%
!!! TAAATGACATATCTATTTTC+AGG + chr4_1:84043701-84043720 Msa0579390:intron 20.0%
!! AATGAATATCTCAACAAAAA+TGG + chr4_1:84044118-84044137 Msa0579390:intron 20.0%
!! CTGCAGAAAAATAAAATTAT+AGG + chr4_1:84044198-84044217 Msa0579390:intron 20.0%
!! ATTATGATACATAATTCTGT+TGG - chr4_1:84044842-84044861 None:intergenic 20.0%
!! ATCATAATCTCAATATAATG+TGG + chr4_1:84044854-84044873 Msa0579390:intron 20.0%
!!! ATAACATTATTTCTGTTCTG+TGG + chr4_1:84037846-84037865 Msa0579390:five_prime_UTR 25.0%
! TTTAGATAGTAGCTTTCTTA+AGG + chr4_1:84038409-84038428 Msa0579390:intron 25.0%
! TCCATGTAAATTTGGATTAA+TGG + chr4_1:84038490-84038509 Msa0579390:intron 25.0%
! TCCATTAATCCAAATTTACA+TGG - chr4_1:84038494-84038513 None:intergenic 25.0%
! TTATATAAAGGCAAGTCTTA+GGG - chr4_1:84038799-84038818 None:intergenic 25.0%
! TTTATATAAAGGCAAGTCTT+AGG - chr4_1:84038800-84038819 None:intergenic 25.0%
! AAAATTGTCAATCTATTACG+AGG - chr4_1:84038861-84038880 None:intergenic 25.0%
! AATTTATGATAAGGGAATCA+CGG - chr4_1:84039266-84039285 None:intergenic 25.0%
! TGCATTCCAATTTATGATAA+GGG - chr4_1:84039274-84039293 None:intergenic 25.0%
! TTGCATTCCAATTTATGATA+AGG - chr4_1:84039275-84039294 None:intergenic 25.0%
! CAACATATGAATATTATGAG+AGG + chr4_1:84039292-84039311 Msa0579390:CDS 25.0%
!! CAGATAACAATTTTGTGAAA+TGG - chr4_1:84039698-84039717 None:intergenic 25.0%
! TAGTACAATGTATCTCTTAT+AGG + chr4_1:84039742-84039761 Msa0579390:intron 25.0%
! TTCTATTGACAACAAAGATT+AGG + chr4_1:84039767-84039786 Msa0579390:intron 25.0%
! TAACAATCTTGGTTCAAATA+TGG - chr4_1:84039794-84039813 None:intergenic 25.0%
! AAACAAACATGTAACAATCT+TGG - chr4_1:84039805-84039824 None:intergenic 25.0%
! CGAATGAAATGATAGTAATA+TGG + chr4_1:84039978-84039997 Msa0579390:intron 25.0%
!!! AACTGAAGAATTTGATTTGA+AGG + chr4_1:84040605-84040624 Msa0579390:CDS 25.0%
!! CAATTTGAAACAAGAGAATA+AGG - chr4_1:84040820-84040839 None:intergenic 25.0%
! TAGGATATTAATAGATGTGA+AGG + chr4_1:84041184-84041203 Msa0579390:CDS 25.0%
! AGGATATTAATAGATGTGAA+GGG + chr4_1:84041185-84041204 Msa0579390:CDS 25.0%
!!! TATTAGAGTAGCTCTAATAA+TGG - chr4_1:84041300-84041319 None:intergenic 25.0%
!! TAGTTTGATCTCTCTTTTAA+TGG + chr4_1:84041354-84041373 Msa0579390:intron 25.0%
! GACATGTGGAAATAATAAAA+AGG + chr4_1:84041472-84041491 Msa0579390:CDS 25.0%
! GTAAGGTTGTAATGTTTATT+TGG + chr4_1:84041507-84041526 Msa0579390:intron 25.0%
! TTGTAGAGAACAAAAAAGAA+TGG + chr4_1:84041933-84041952 Msa0579390:CDS 25.0%
! ATTCCAGAATAAAACAAATG+GGG + chr4_1:84042222-84042241 Msa0579390:CDS 25.0%
! AAAATCATAACCAAATGGAT+TGG + chr4_1:84042289-84042308 Msa0579390:CDS 25.0%
! CAAGGTAAATGAATTTAACT+GGG + chr4_1:84042357-84042376 Msa0579390:intron 25.0%
! GTCACATTATAATGTCAAAA+TGG + chr4_1:84042465-84042484 Msa0579390:intron 25.0%
!!! TGTGTTATTTAGTTCCTTTA+TGG + chr4_1:84042551-84042570 Msa0579390:intron 25.0%
! GTAGAAAAATGTATCCATAA+AGG - chr4_1:84042568-84042587 None:intergenic 25.0%
! TCATTTATCAAAGAGAAAAC+AGG + chr4_1:84042660-84042679 Msa0579390:CDS 25.0%
!!! TGTTTATTTTCACCTTTTCA+AGG + chr4_1:84042814-84042833 Msa0579390:intron 25.0%
! GATTTCTATAACATTAGAGA+TGG - chr4_1:84042972-84042991 None:intergenic 25.0%
! GAAATCCTTGTAACATTATA+CGG + chr4_1:84042986-84043005 Msa0579390:intron 25.0%
!!! ATGATGTTATTTTACAGCAT+AGG - chr4_1:84043077-84043096 None:intergenic 25.0%
! TTTAAGAATCCATCATAAAG+GGG - chr4_1:84043134-84043153 None:intergenic 25.0%
!! TCTATTCAGCTGTTATTTAT+TGG - chr4_1:84043587-84043606 None:intergenic 25.0%
! TATCATTAACCATGAATTGA+GGG - chr4_1:84043683-84043702 None:intergenic 25.0%
! TTATCATTAACCATGAATTG+AGG - chr4_1:84043684-84043703 None:intergenic 25.0%
! TTTGGAAAATGTTTAATTCC+AGG + chr4_1:84044073-84044092 Msa0579390:intron 25.0%
! TTGGAAAATGTTTAATTCCA+GGG + chr4_1:84044074-84044093 Msa0579390:intron 25.0%
! AACATGAAATTTGCAATGAA+TGG + chr4_1:84044517-84044536 Msa0579390:CDS 25.0%
! GTTCTTAAAATCAGAATACT+TGG + chr4_1:84044677-84044696 Msa0579390:intron 25.0%
! AAAGAAAAACAAGAAGGAAA+AGG - chr4_1:84044718-84044737 None:intergenic 25.0%
! TGTATGAAAGAAAAACAAGA+AGG - chr4_1:84044724-84044743 None:intergenic 25.0%
! AAACAAGCTCAAATAAAATG+TGG + chr4_1:84044780-84044799 Msa0579390:intron 25.0%
!!! TGTTACTTACTTTTTGATCA+CGG - chr4_1:84045089-84045108 None:intergenic 25.0%
! AATTCATCCAAAAAGAATTG+CGG - chr4_1:84045191-84045210 None:intergenic 25.0%
! TTGTTTAATGCATAATGCAT+AGG + chr4_1:84045321-84045340 Msa0579390:three_prime_UTR 25.0%
!! AAAGCATGTAAAACTTTTCA+AGG - chr4_1:84045544-84045563 None:intergenic 25.0%
!! TTGAAAAGTTTTACATGCTT+TGG + chr4_1:84045543-84045562 Msa0579390:three_prime_UTR 25.0%
!! CCAAATGTTTGATTTGGAAT+GGG - chr4_1:84037978-84037997 None:intergenic 30.0%
! AGTTTGATGGAAATTTTGCT+GGG + chr4_1:84038267-84038286 Msa0579390:intron 30.0%
! GAAATTTTGCTGGGTTTAAT+TGG + chr4_1:84038276-84038295 Msa0579390:intron 30.0%
!!! TTGGTTACTAGTGCATTTTT+TGG + chr4_1:84038295-84038314 Msa0579390:intron 30.0%
!!! TTACTAGTGCATTTTTTGGA+AGG + chr4_1:84038299-84038318 Msa0579390:intron 30.0%
!! TTTATCCCTTTGAAGTTTGT+TGG + chr4_1:84038591-84038610 Msa0579390:intron 30.0%
TATATAAAGGCAAGTCTTAG+GGG - chr4_1:84038798-84038817 None:intergenic 30.0%
ATTAGTTCCATTACGATTCA+AGG - chr4_1:84038831-84038850 None:intergenic 30.0%
AGTGTTCTCTTGAAGTTATA+AGG + chr4_1:84038955-84038974 Msa0579390:intron 30.0%
GTGATTCCCTTATCATAAAT+TGG + chr4_1:84039265-84039284 Msa0579390:CDS 30.0%
AGTATCTACAGGTTCATATT+GGG + chr4_1:84039349-84039368 Msa0579390:intron 30.0%
TCACAATTGGGAAAAAATGT+AGG - chr4_1:84039429-84039448 None:intergenic 30.0%
!!! ACATTTTTTCCCAATTGTGA+AGG + chr4_1:84039429-84039448 Msa0579390:intron 30.0%
!!! CATTTTTTCCCAATTGTGAA+GGG + chr4_1:84039430-84039449 Msa0579390:intron 30.0%
! TTTTGTGAAATGGACAGAAA+GGG - chr4_1:84039688-84039707 None:intergenic 30.0%
! ATTTTGTGAAATGGACAGAA+AGG - chr4_1:84039689-84039708 None:intergenic 30.0%
AATTGTTATCTGTCATCTTG+AGG + chr4_1:84039706-84039725 Msa0579390:intron 30.0%
ACTATCATTTCATTCGTGAA+CGG - chr4_1:84039974-84039993 None:intergenic 30.0%
ATTCAAACAACGTATAACGA+AGG + chr4_1:84040179-84040198 Msa0579390:CDS 30.0%
GGCAGCAATAATATGAAAAT+TGG - chr4_1:84040280-84040299 None:intergenic 30.0%
! CTTTCTTCTATCACTCTTTT+TGG + chr4_1:84040330-84040349 Msa0579390:intron 30.0%
TGACGTGTCTATTTATAGAT+GGG + chr4_1:84040390-84040409 Msa0579390:intron 30.0%
TCTTATCCAGTTAGATTCTA+TGG + chr4_1:84040444-84040463 Msa0579390:CDS 30.0%
! TTCTATGGAGAAGTTATTTC+AGG + chr4_1:84040459-84040478 Msa0579390:CDS 30.0%
! TCTATGGAGAAGTTATTTCA+GGG + chr4_1:84040460-84040479 Msa0579390:CDS 30.0%
TTCTTCAGTTGAAACTTTAG+AGG - chr4_1:84040595-84040614 None:intergenic 30.0%
ATTTGAAGGCTTTCAATACT+GGG + chr4_1:84040619-84040638 Msa0579390:CDS 30.0%
!! TCTTCTTCAAAAGTACTTTC+TGG + chr4_1:84040738-84040757 Msa0579390:intron 30.0%
! TCTCTTGTTTCAAATTGTAG+TGG + chr4_1:84040823-84040842 Msa0579390:intron 30.0%
ATTAATATCCTAATCAGCTC+AGG - chr4_1:84041176-84041195 None:intergenic 30.0%
AAGCTTGGGATATTACTAAA+AGG + chr4_1:84041222-84041241 Msa0579390:CDS 30.0%
TTTATTATTTCCACATGTCG+AGG - chr4_1:84041471-84041490 None:intergenic 30.0%
AATAAAAAGGATAGATGAGG+AGG + chr4_1:84041485-84041504 Msa0579390:CDS 30.0%
ATTTCATATGTCCATCTACA+CGG + chr4_1:84041552-84041571 Msa0579390:intron 30.0%
! GAAGAAAATGATGATGATGA+CGG + chr4_1:84041848-84041867 Msa0579390:CDS 30.0%
!!! GTTTTATTCTGGAATTTCTC+AGG - chr4_1:84042217-84042236 None:intergenic 30.0%
! GTTATGATTTTACTAAGGTC+GGG - chr4_1:84042280-84042299 None:intergenic 30.0%
! GGTTATGATTTTACTAAGGT+CGG - chr4_1:84042281-84042300 None:intergenic 30.0%
GCAAGGTAAATGAATTTAAC+TGG + chr4_1:84042356-84042375 Msa0579390:intron 30.0%
AAAATGGTAGCAAGCATTAT+AGG + chr4_1:84042481-84042500 Msa0579390:intron 30.0%
CTAATGTTCATTCCTTGAAA+AGG - chr4_1:84042829-84042848 None:intergenic 30.0%
!! ATGTATGCGTAAGTTGTTTT+AGG - chr4_1:84042867-84042886 None:intergenic 30.0%
! TCATTGTTTAAGTTCTACAC+AGG - chr4_1:84042936-84042955 None:intergenic 30.0%
TGTGTAGAACTTAAACAATG+AGG + chr4_1:84042935-84042954 Msa0579390:intron 30.0%
GATATGACAGCTTAAAATAG+CGG + chr4_1:84043270-84043289 Msa0579390:intron 30.0%
!!! AATAGCGGATTTTTGTCTTT+TGG + chr4_1:84043285-84043304 Msa0579390:intron 30.0%
ATGGCATAGAAATTGAACTA+GGG - chr4_1:84043417-84043436 None:intergenic 30.0%
TATGGCATAGAAATTGAACT+AGG - chr4_1:84043418-84043437 None:intergenic 30.0%
!!! TTTTTTTTCCACAAACACAC+AGG + chr4_1:84043482-84043501 Msa0579390:intron 30.0%
AGTGAGAAAAATCACATAAC+TGG + chr4_1:84043519-84043538 Msa0579390:intron 30.0%
! AGCTGTTATTTATTGGATCT+TGG - chr4_1:84043580-84043599 None:intergenic 30.0%
AACAGCCATTAAAATTCCAA+TGG + chr4_1:84043643-84043662 Msa0579390:intron 30.0%
! ACATGCCATTGGAATTTTAA+TGG - chr4_1:84043651-84043670 None:intergenic 30.0%
AGCGTATTCATGAATACAAA+CGG + chr4_1:84043727-84043746 Msa0579390:CDS 30.0%
AATGAAAGAATTGAATGCTG+AGG + chr4_1:84043791-84043810 Msa0579390:CDS 30.0%
GAAAACAATTGTTTGTTCCT+CGG + chr4_1:84043817-84043836 Msa0579390:CDS 30.0%
AAAACAATTGTTTGTTCCTC+GGG + chr4_1:84043818-84043837 Msa0579390:CDS 30.0%
! GATGAATTTTACAATCCTCT+TGG - chr4_1:84043886-84043905 None:intergenic 30.0%
GTAAAATTCATCACAGATGT+AGG + chr4_1:84043894-84043913 Msa0579390:CDS 30.0%
GGTGATAGATAAACACATTA+TGG + chr4_1:84043976-84043995 Msa0579390:intron 30.0%
TTATGGTCGTTCCAAAAATT+TGG + chr4_1:84043993-84044012 Msa0579390:intron 30.0%
! CTTTATCTGAAGTAGAACTT+TGG + chr4_1:84044055-84044074 Msa0579390:intron 30.0%
!!! ATTTTATTTTTCTGCAGCTG+AGG - chr4_1:84044195-84044214 None:intergenic 30.0%
TTAGCTGAAAAGCTGATAAA+GGG + chr4_1:84044224-84044243 Msa0579390:intron 30.0%
TTATCTATACCTAATGTGCT+GGG - chr4_1:84044379-84044398 None:intergenic 30.0%
TTTATCTATACCTAATGTGC+TGG - chr4_1:84044380-84044399 None:intergenic 30.0%
GTTGAAATAAGAGAAGAAGT+TGG + chr4_1:84044574-84044593 Msa0579390:CDS 30.0%
! GAAGACAACTTCTTTCTTTT+TGG + chr4_1:84044598-84044617 Msa0579390:CDS 30.0%
TGGACTTAACAATGTCTTAA+AGG - chr4_1:84044817-84044836 None:intergenic 30.0%
! TATGTTAGAAGTGGTGTTTT+TGG + chr4_1:84044934-84044953 Msa0579390:CDS 30.0%
AAGTAAGTAACATCAAGTCA+TGG + chr4_1:84045097-84045116 Msa0579390:CDS 30.0%
! TCTTTTTGGATGAATTTCTC+AGG + chr4_1:84045195-84045214 Msa0579390:three_prime_UTR 30.0%
ATGAATATGCCAGAGATATA+TGG + chr4_1:84045497-84045516 Msa0579390:three_prime_UTR 30.0%
TCGATGAACATAATTCTACA+AGG - chr4_1:84045712-84045731 None:intergenic 30.0%
! ATGGTCTAATTTTCCAAATG+AGG + chr4_1:84045759-84045778 Msa0579390:three_prime_UTR 30.0%
AGTTTGAATAATCCATCCAT+GGG - chr4_1:84045811-84045830 None:intergenic 30.0%
TAGTTTGAATAATCCATCCA+TGG - chr4_1:84045812-84045831 None:intergenic 30.0%
! GGTAACTACATGCTGTATTT+TGG + chr4_1:84037693-84037712 Msa0579390:five_prime_UTR 35.0%
! GATTTGGAATGGGAATGTAA+AGG - chr4_1:84037968-84037987 None:intergenic 35.0%
CCCATTCCAAATCAAACATT+TGG + chr4_1:84037975-84037994 Msa0579390:CDS 35.0%
!! GCCAAATGTTTGATTTGGAA+TGG - chr4_1:84037979-84037998 None:intergenic 35.0%
ATCAAACTGAAACTCTTGCA+AGG - chr4_1:84038255-84038274 None:intergenic 35.0%
TTGCAAGAGTTTCAGTTTGA+TGG + chr4_1:84038254-84038273 Msa0579390:intron 35.0%
! CAGTTTGATGGAAATTTTGC+TGG + chr4_1:84038266-84038285 Msa0579390:intron 35.0%
TTGGAAGGTTCTCAAAAGTA+AGG + chr4_1:84038314-84038333 Msa0579390:intron 35.0%
TCAATGCACATTATAGACGT+TGG + chr4_1:84038382-84038401 Msa0579390:intron 35.0%
TTTCTTAAGGTGTGCAGTAT+AGG + chr4_1:84038422-84038441 Msa0579390:intron 35.0%
ATCGTAACTTATATTGCCAC+AGG + chr4_1:84038446-84038465 Msa0579390:intron 35.0%
TAACTTATATTGCCACAGGA+AGG + chr4_1:84038450-84038469 Msa0579390:intron 35.0%
GGATTAATGGAATCTAGTTG+AGG + chr4_1:84038503-84038522 Msa0579390:intron 35.0%
TTCCTCCAACAAACTTCAAA+GGG - chr4_1:84038599-84038618 None:intergenic 35.0%
TTTCCTCCAACAAACTTCAA+AGG - chr4_1:84038600-84038619 None:intergenic 35.0%
CAAGTTTCCTTGAATCGTAA+TGG + chr4_1:84038821-84038840 Msa0579390:intron 35.0%
TGCAACGAATTCATTTGAAG+TGG - chr4_1:84039133-84039152 None:intergenic 35.0%
TTTCTCAGGAGAAAAAGATG+TGG - chr4_1:84039202-84039221 None:intergenic 35.0%
GCAAGCTTATTACATGTCTA+TGG + chr4_1:84039326-84039345 Msa0579390:CDS 35.0%
GAGTATCTACAGGTTCATAT+TGG + chr4_1:84039348-84039367 Msa0579390:intron 35.0%
TGGGTTTCCTTTATGAAACA+CGG + chr4_1:84039368-84039387 Msa0579390:intron 35.0%
AAATGACCCGTGTTTCATAA+AGG - chr4_1:84039378-84039397 None:intergenic 35.0%
!! AGGGCATTGTTAAATGCAAT+TGG + chr4_1:84039454-84039473 Msa0579390:CDS 35.0%
! GGGCATTGTTAAATGCAATT+GGG + chr4_1:84039455-84039474 Msa0579390:CDS 35.0%
ATTGGGAATTTACAACTCTC+AGG + chr4_1:84039472-84039491 Msa0579390:CDS 35.0%
GAAACTGGGTTACAATTTAG+AGG + chr4_1:84039516-84039535 Msa0579390:CDS 35.0%
CAACAAAGGAGAACAATAGT+AGG - chr4_1:84039563-84039582 None:intergenic 35.0%
!! ATTGTTCTCCTTTGTTGTTG+CGG + chr4_1:84039566-84039585 Msa0579390:intron 35.0%
TGTTTATCAAATAGTCCTCC+TGG + chr4_1:84039630-84039649 Msa0579390:intron 35.0%
! CATGTAACAGTAAGTTGAAC+TGG + chr4_1:84039656-84039675 Msa0579390:intron 35.0%
GTAAAATGTCTTCATTCGTG+TGG + chr4_1:84039902-84039921 Msa0579390:intron 35.0%
GTGTGGAAACATACTAATGA+AGG + chr4_1:84039919-84039938 Msa0579390:intron 35.0%
CAAACTCACATACAATTCAC+AGG + chr4_1:84040038-84040057 Msa0579390:intron 35.0%
TATGGACTTAGATACAGGTA+TGG + chr4_1:84040153-84040172 Msa0579390:CDS 35.0%
AAACAACGTATAACGAAGGA+CGG + chr4_1:84040183-84040202 Msa0579390:CDS 35.0%
CTGACGTGTCTATTTATAGA+TGG + chr4_1:84040389-84040408 Msa0579390:intron 35.0%
ATTTATAGATGGGAAATCCC+TGG + chr4_1:84040400-84040419 Msa0579390:intron 35.0%
TTTATAGATGGGAAATCCCT+GGG + chr4_1:84040401-84040420 Msa0579390:intron 35.0%
ACTTCTCCATAGAATCTAAC+TGG - chr4_1:84040453-84040472 None:intergenic 35.0%
!!! CTAGTTTTGTATCCAGGTAT+TGG - chr4_1:84040546-84040565 None:intergenic 35.0%
GATTTGAAGGCTTTCAATAC+TGG + chr4_1:84040618-84040637 Msa0579390:CDS 35.0%
TTTGAAGGCTTTCAATACTG+GGG + chr4_1:84040620-84040639 Msa0579390:CDS 35.0%
ATACATTCTAAGCTCAGTAG+TGG - chr4_1:84040778-84040797 None:intergenic 35.0%
ATCTGTTACATTCTATACCC+TGG + chr4_1:84040972-84040991 Msa0579390:CDS 35.0%
TCTGTTACATTCTATACCCT+GGG + chr4_1:84040973-84040992 Msa0579390:CDS 35.0%
TGAAAAGAGATCAGGAATGA+CGG + chr4_1:84041082-84041101 Msa0579390:CDS 35.0%
ATCAGGAATGACGGTAAATT+GGG + chr4_1:84041091-84041110 Msa0579390:CDS 35.0%
ATTTGTACCACCACTTTATC+TGG - chr4_1:84041125-84041144 None:intergenic 35.0%
TAATGGCTCTTCTGTTAGAA+CGG + chr4_1:84041371-84041390 Msa0579390:intron 35.0%
CAACAACTTCATGTGTAAAC+TGG - chr4_1:84041640-84041659 None:intergenic 35.0%
ATGAAGTTGTTGCTGAGTAT+GGG + chr4_1:84041648-84041667 Msa0579390:CDS 35.0%
! ACTAGAGAATATTGAGTTGC+CGG + chr4_1:84041718-84041737 Msa0579390:CDS 35.0%
AATTTCCTCAACAGGATCAT+CGG - chr4_1:84041780-84041799 None:intergenic 35.0%
TCAACATCAATTTCCTCAAC+AGG - chr4_1:84041788-84041807 None:intergenic 35.0%
GAAGAAGAAGAAGATGAAGT+GGG + chr4_1:84041872-84041891 Msa0579390:CDS 35.0%
AAGAAGAAGAAGATGAAGTG+GGG + chr4_1:84041873-84041892 Msa0579390:CDS 35.0%
AAAAACCACCAACAACACAT+AGG - chr4_1:84042006-84042025 None:intergenic 35.0%
TCACAGTGAGATTGTAAAAG+AGG + chr4_1:84042048-84042067 Msa0579390:CDS 35.0%
!! TGTCATTGATTTGACAGTTG+TGG + chr4_1:84042191-84042210 Msa0579390:intron 35.0%
!!! TCACCCCATTTGTTTTATTC+TGG - chr4_1:84042228-84042247 None:intergenic 35.0%
GGTAACAGATCTTGAGAAAT+TGG + chr4_1:84042324-84042343 Msa0579390:CDS 35.0%
CAGAGTGGATAGAATCAAAA+AGG + chr4_1:84042616-84042635 Msa0579390:CDS 35.0%
TGTACATCAAACATTGCATC+TGG - chr4_1:84042699-84042718 None:intergenic 35.0%
AGATGCAATGTTTGATGTAC+AGG + chr4_1:84042698-84042717 Msa0579390:CDS 35.0%
! GAAGGAAATGCAGTTTTTGA+TGG - chr4_1:84042735-84042754 None:intergenic 35.0%
CATCTGAATAATAGCAATGC+TGG + chr4_1:84042772-84042791 Msa0579390:intron 35.0%
TGAGACCGTATAATGTTACA+AGG - chr4_1:84042994-84043013 None:intergenic 35.0%
! ACTATTTGCTGCATAGAAGA+AGG + chr4_1:84043013-84043032 Msa0579390:intron 35.0%
! CTATTTGCTGCATAGAAGAA+GGG + chr4_1:84043014-84043033 Msa0579390:intron 35.0%
!!! GCGATGTTATTTTACAGCAT+AGG - chr4_1:84043112-84043131 None:intergenic 35.0%
TATGCCACTACAATCTTTCA+TGG - chr4_1:84043188-84043207 None:intergenic 35.0%
CCAATGTTATTGATGTCAGA+TGG - chr4_1:84043321-84043340 None:intergenic 35.0%
CCATCTGACATCAATAACAT+TGG + chr4_1:84043318-84043337 Msa0579390:intron 35.0%
AATAGTTACCTGTGTGTTTG+TGG - chr4_1:84043493-84043512 None:intergenic 35.0%
AGACTAACATGAAATCGTAC+TGG + chr4_1:84043611-84043630 Msa0579390:intron 35.0%
GACTAACATGAAATCGTACT+GGG + chr4_1:84043612-84043631 Msa0579390:intron 35.0%
ACTAACATGAAATCGTACTG+GGG + chr4_1:84043613-84043632 Msa0579390:intron 35.0%
! TGTTTTACACCCTCAATTCA+TGG + chr4_1:84043671-84043690 Msa0579390:intron 35.0%
TTCAAAAGATCTCCAATCTC+TGG - chr4_1:84043939-84043958 None:intergenic 35.0%
! AGAGATTGGAGATCTTTTGA+AGG + chr4_1:84043938-84043957 Msa0579390:CDS 35.0%
!! TTGAAGGTATCAGTCAAACT+TGG + chr4_1:84043954-84043973 Msa0579390:intron 35.0%
!! TGAAGGTATCAGTCAAACTT+GGG + chr4_1:84043955-84043974 Msa0579390:intron 35.0%
TCTTCATACATAACAGCATG+TGG + chr4_1:84044169-84044188 Msa0579390:intron 35.0%
GTTAGCTGAAAAGCTGATAA+AGG + chr4_1:84044223-84044242 Msa0579390:intron 35.0%
CTTAGTCATAAAACAGATCC+TGG + chr4_1:84044270-84044289 Msa0579390:intron 35.0%
GCAACACTAACATTGTAATC+AGG - chr4_1:84044327-84044346 None:intergenic 35.0%
ATGAATGGATGTGTGCAAAT+TGG + chr4_1:84044532-84044551 Msa0579390:CDS 35.0%
TTAAGGAAAGAAAGAGCAGA+AGG + chr4_1:84044646-84044665 Msa0579390:CDS 35.0%
!! CACTTTGCTTTTCATATCAG+TGG + chr4_1:84044742-84044761 Msa0579390:intron 35.0%
! GATACATAATTCTGTTGGCT+TGG - chr4_1:84044837-84044856 None:intergenic 35.0%
CCTTTACTTCTTCAAACCTT+GGG - chr4_1:84044912-84044931 None:intergenic 35.0%
! GTAAAGGCATATGTTAGAAG+TGG + chr4_1:84044925-84044944 Msa0579390:CDS 35.0%
TACAACTACGACGAATTGAT+GGG + chr4_1:84044961-84044980 Msa0579390:CDS 35.0%
! AATTGATGGGATCTTTGGAA+GGG + chr4_1:84044974-84044993 Msa0579390:CDS 35.0%
CAACAAGGAAATAATCAGCA+CGG - chr4_1:84045014-84045033 None:intergenic 35.0%
TGATTATTTCCTTGTTGGCA+AGG + chr4_1:84045017-84045036 Msa0579390:CDS 35.0%
! AAGCTTTCCGCAATTCTTTT+TGG + chr4_1:84045181-84045200 Msa0579390:three_prime_UTR 35.0%
GCAAGTTATTATACGAACCA+TGG + chr4_1:84045351-84045370 Msa0579390:three_prime_UTR 35.0%
CATAAGCAATACATATGCCA+TGG - chr4_1:84045371-84045390 None:intergenic 35.0%
AAGAACTGATTGATGTGTGT+TGG + chr4_1:84045402-84045421 Msa0579390:three_prime_UTR 35.0%
TGGCATATTCATGAATAGTC+CGG - chr4_1:84045489-84045508 None:intergenic 35.0%
CTCAATTCTCCATATATCTC+TGG - chr4_1:84045509-84045528 None:intergenic 35.0%
!! ACTTTTCAAGGCAATACAAC+TGG - chr4_1:84045532-84045551 None:intergenic 35.0%
! GTTTTACATGCTTTGGTCTA+AGG + chr4_1:84045550-84045569 Msa0579390:three_prime_UTR 35.0%
! TTTGTGAACATTCTGAGAGA+AGG - chr4_1:84045591-84045610 None:intergenic 35.0%
TCTCTCAGAATGTTCACAAA+AGG + chr4_1:84045591-84045610 Msa0579390:three_prime_UTR 35.0%
AAGGATAACATAAGCTCTAC+TGG - chr4_1:84045693-84045712 None:intergenic 35.0%
GAAAGAAGAACGAGTGAAAG+AGG - chr4_1:84037805-84037824 None:intergenic 40.0%
TCGCTGCCAAATGTTTGATT+TGG - chr4_1:84037984-84038003 None:intergenic 40.0%
GAGCTTTCTAATTGCTCTTC+TGG - chr4_1:84038050-84038069 None:intergenic 40.0%
GAACTGAAAGAACGACTCAT+TGG + chr4_1:84038103-84038122 Msa0579390:CDS 40.0%
AAAGAACGACTCATTGGACA+AGG + chr4_1:84038109-84038128 Msa0579390:CDS 40.0%
AGGTTCTCAAAAGTAAGGAG+TGG + chr4_1:84038319-84038338 Msa0579390:intron 40.0%
GGTTCTCAAAAGTAAGGAGT+GGG + chr4_1:84038320-84038339 Msa0579390:intron 40.0%
ATTAAGTGACATCCTTCCTG+TGG - chr4_1:84038465-84038484 None:intergenic 40.0%
!! ATCCCTTTGAAGTTTGTTGG+AGG + chr4_1:84038594-84038613 Msa0579390:intron 40.0%
CCTGCAAGTGTTAACCAATA+AGG - chr4_1:84039108-84039127 None:intergenic 40.0%
! CCTTATTGGTTAACACTTGC+AGG + chr4_1:84039105-84039124 Msa0579390:intron 40.0%
TTACTGGGCTCAAATTTCTC+AGG - chr4_1:84039216-84039235 None:intergenic 40.0%
TGAGAAATTTGAGCCCAGTA+AGG + chr4_1:84039215-84039234 Msa0579390:CDS 40.0%
GTTGCAAAGTAAGCCTTACT+GGG - chr4_1:84039231-84039250 None:intergenic 40.0%
AGTTGCAAAGTAAGCCTTAC+TGG - chr4_1:84039232-84039251 None:intergenic 40.0%
! CATGTCTATGGAGTATCTAC+AGG + chr4_1:84039338-84039357 Msa0579390:CDS 40.0%
GGGTTTCCTTTATGAAACAC+GGG + chr4_1:84039369-84039388 Msa0579390:intron 40.0%
! TTTTCCCAATTGTGAAGGGT+AGG + chr4_1:84039434-84039453 Msa0579390:intron 40.0%
TTTCCCAATTGTGAAGGGTA+GGG + chr4_1:84039435-84039454 Msa0579390:intron 40.0%
GGGTTACAATTTAGAGGATG+TGG + chr4_1:84039522-84039541 Msa0579390:CDS 40.0%
TTTAGAGGATGTGGCTAATC+AGG + chr4_1:84039531-84039550 Msa0579390:CDS 40.0%
ACTTACTGTTACATGCTACC+AGG - chr4_1:84039651-84039670 None:intergenic 40.0%
TTCTTGCTTTCTAGACTCCT+TGG + chr4_1:84040104-84040123 Msa0579390:CDS 40.0%
AACACTGAATTACCCTGCAT+GGG + chr4_1:84040128-84040147 Msa0579390:CDS 40.0%
CATATTATTGCTGCCTATGC+AGG + chr4_1:84040285-84040304 Msa0579390:intron 40.0%
TCGTTTCTCTGAATTTCCCA+GGG - chr4_1:84040420-84040439 None:intergenic 40.0%
ATCGTTTCTCTGAATTTCCC+AGG - chr4_1:84040421-84040440 None:intergenic 40.0%
!!! GACTGGAGGAGAAAGTATTT+TGG + chr4_1:84040503-84040522 Msa0579390:CDS 40.0%
GCTTATGATGTTCCAATACC+TGG + chr4_1:84040531-84040550 Msa0579390:CDS 40.0%
!!! GTGGTTCTAGTTTTGTATCC+AGG - chr4_1:84040552-84040571 None:intergenic 40.0%
TGTCATGAAGAATGCAGAGA+AGG + chr4_1:84040662-84040681 Msa0579390:CDS 40.0%
AAGAATGCAGAGAAGGTTTG+TGG + chr4_1:84040669-84040688 Msa0579390:intron 40.0%
GTAAGGACCACAAAGAAACA+AGG - chr4_1:84040698-84040717 None:intergenic 40.0%
TGAACTTAGATGCAGGTGTA+AGG - chr4_1:84040715-84040734 None:intergenic 40.0%
AAGACACTGAACTTAGATGC+AGG - chr4_1:84040722-84040741 None:intergenic 40.0%
CTGTTACATTCTATACCCTG+GGG + chr4_1:84040974-84040993 Msa0579390:CDS 40.0%
!! CTTCTATTGATTCATCCCCA+GGG - chr4_1:84040992-84041011 None:intergenic 40.0%
GATCAGGAATGACGGTAAAT+TGG + chr4_1:84041090-84041109 Msa0579390:CDS 40.0%
TACCACCACTTTATCTGGAA+GGG - chr4_1:84041120-84041139 None:intergenic 40.0%
TAGATGTGAAGGGTTTAAGC+TGG + chr4_1:84041195-84041214 Msa0579390:CDS 40.0%
AGATGTGAAGGGTTTAAGCT+GGG + chr4_1:84041196-84041215 Msa0579390:CDS 40.0%
TTTAAGCTGGGAGAAAGCTT+GGG + chr4_1:84041208-84041227 Msa0579390:CDS 40.0%
AAAGGATAGATGAGGAGGTA+AGG + chr4_1:84041490-84041509 Msa0579390:intron 40.0%
CATAAAGAAGACCGTGTAGA+TGG - chr4_1:84041566-84041585 None:intergenic 40.0%
CATGAAGTTGTTGCTGAGTA+TGG + chr4_1:84041647-84041666 Msa0579390:CDS 40.0%
! GAATATTGAGTTGCCGGATT+CGG + chr4_1:84041724-84041743 Msa0579390:CDS 40.0%
CGAAGAAGAAGAAGATGAAG+TGG + chr4_1:84041871-84041890 Msa0579390:CDS 40.0%
ATGGCTAACCTATGTGTTGT+TGG + chr4_1:84041995-84042014 Msa0579390:CDS 40.0%
!!! GTTGGTGGTTTTTCTGTGAA+CGG + chr4_1:84042013-84042032 Msa0579390:CDS 40.0%
TAAGGTCGGGATTACAGAAA+CGG - chr4_1:84042267-84042286 None:intergenic 40.0%
GTCTTCTGTTCCAATCCATT+TGG - chr4_1:84042302-84042321 None:intergenic 40.0%
!! AATGGATTGGAACAGAAGAC+TGG + chr4_1:84042302-84042321 Msa0579390:CDS 40.0%
!! ATGGATTGGAACAGAAGACT+GGG + chr4_1:84042303-84042322 Msa0579390:CDS 40.0%
TATGCAACAACTTCCACAGT+TGG + chr4_1:84042418-84042437 Msa0579390:intron 40.0%
CTACCAGTTTGCAGATAATG+AGG + chr4_1:84042584-84042603 Msa0579390:intron 40.0%
GATCCTCATTATCTGCAAAC+TGG - chr4_1:84042590-84042609 None:intergenic 40.0%
! GGAAATGCAGTTTTTGATGG+CGG - chr4_1:84042732-84042751 None:intergenic 40.0%
GCTAACTAAACACGAGAAGA+AGG - chr4_1:84042753-84042772 None:intergenic 40.0%
TGCTGGAAATGTTTCATGTC+TGG + chr4_1:84042789-84042808 Msa0579390:intron 40.0%
ATAACATCGCCCCTTTATGA+TGG + chr4_1:84043122-84043141 Msa0579390:intron 40.0%
TCAGCCATGAAAGATTGTAG+TGG + chr4_1:84043181-84043200 Msa0579390:intron 40.0%
CATCTTTCACAAATTGGCCA+TGG - chr4_1:84043226-84043245 None:intergenic 40.0%
CATGGCCAATTTGTGAAAGA+TGG + chr4_1:84043224-84043243 Msa0579390:intron 40.0%
CGTTGCCATCTTTCACAAAT+TGG - chr4_1:84043232-84043251 None:intergenic 40.0%
ATATCCGCCATAAAATGCCA+TGG - chr4_1:84043255-84043274 None:intergenic 40.0%
! GGATTTTTGTCTTTTGGCCA+AGG + chr4_1:84043291-84043310 Msa0579390:intron 40.0%
TGAAATCGTACTGGGGAAAA+TGG + chr4_1:84043620-84043639 Msa0579390:intron 40.0%
GGTGTAAAACAACATGCCAT+TGG - chr4_1:84043662-84043681 None:intergenic 40.0%
ACGGCAGTTACTGAATATCA+TGG + chr4_1:84043746-84043765 Msa0579390:CDS 40.0%
CGGCAGTTACTGAATATCAT+GGG + chr4_1:84043747-84043766 Msa0579390:CDS 40.0%
CAACATATGTTCAAGCCAAG+AGG + chr4_1:84043868-84043887 Msa0579390:CDS 40.0%
GTTAATCACGATCCAGAGAT+TGG + chr4_1:84043924-84043943 Msa0579390:CDS 40.0%
! GGCGTAAGCAACCAAATTTT+TGG - chr4_1:84044007-84044026 None:intergenic 40.0%
GTTGCTGAAATGCTAATTCC+TGG + chr4_1:84044342-84044361 Msa0579390:CDS 40.0%
TTCTGTGTGTTTAGTACAGC+TGG + chr4_1:84044472-84044491 Msa0579390:intron 40.0%
TCTGTGTGTTTAGTACAGCT+GGG + chr4_1:84044473-84044492 Msa0579390:intron 40.0%
! TTTCATGTTGCTTGTTCCAC+TGG - chr4_1:84044506-84044525 None:intergenic 40.0%
TGCAAATTGGAACTCTCGAT+GGG + chr4_1:84044545-84044564 Msa0579390:CDS 40.0%
CTGAAGAAATTGCAGGGTTA+AGG + chr4_1:84044629-84044648 Msa0579390:CDS 40.0%
GAAAGAAAGAGCAGAAGGAA+AGG + chr4_1:84044651-84044670 Msa0579390:CDS 40.0%
CCCAAGGTTTGAAGAAGTAA+AGG + chr4_1:84044909-84044928 Msa0579390:CDS 40.0%
GCCTTTACTTCTTCAAACCT+TGG - chr4_1:84044913-84044932 None:intergenic 40.0%
CATCAATTCGTCGTAGTTGT+AGG - chr4_1:84044962-84044981 None:intergenic 40.0%
CTACAACTACGACGAATTGA+TGG + chr4_1:84044960-84044979 Msa0579390:CDS 40.0%
GAATTGATGGGATCTTTGGA+AGG + chr4_1:84044973-84044992 Msa0579390:CDS 40.0%
!! CGTGCTGATTATTTCCTTGT+TGG + chr4_1:84045012-84045031 Msa0579390:CDS 40.0%
AGACAACTTGTGTTCAACAC+AGG - chr4_1:84045236-84045255 None:intergenic 40.0%
TGAACACAAGTTGTCTCAAC+TGG + chr4_1:84045240-84045259 Msa0579390:three_prime_UTR 40.0%
ATGTCAATCTTGAACACAGC+TGG + chr4_1:84045442-84045461 Msa0579390:three_prime_UTR 40.0%
CGTATAAATTCAGCAGTGAC+CGG + chr4_1:84045467-84045486 Msa0579390:three_prime_UTR 40.0%
CACAAAAGGCTTGAAAACTG+AGG + chr4_1:84045605-84045624 Msa0579390:three_prime_UTR 40.0%
AAAGGCTTGAAAACTGAGGA+AGG + chr4_1:84045609-84045628 Msa0579390:three_prime_UTR 40.0%
TCCAAATGAGGATGCTGATA+AGG + chr4_1:84045771-84045790 Msa0579390:three_prime_UTR 40.0%
ACCTTATCAGCATCCTCATT+TGG - chr4_1:84045775-84045794 None:intergenic 40.0%
GGTTATATTGTTCCATCCCA+TGG + chr4_1:84045792-84045811 Msa0579390:three_prime_UTR 40.0%
ATATTGTTCCATCCCATGGA+TGG + chr4_1:84045796-84045815 Msa0579390:three_prime_UTR 40.0%
TGAATAATCCATCCATGGGA+TGG - chr4_1:84045807-84045826 None:intergenic 40.0%
TACCATTCTCAACAACCTGC+AGG + chr4_1:84037930-84037949 Msa0579390:CDS 45.0%
GGCAGCGACAAAACAACATT+TGG + chr4_1:84037996-84038015 Msa0579390:CDS 45.0%
AAAGTAAGGAGTGGGAACCA+TGG + chr4_1:84038328-84038347 Msa0579390:intron 45.0%
ATGCCCTACCCTTCACAATT+GGG - chr4_1:84039441-84039460 None:intergenic 45.0%
AATGCCCTACCCTTCACAAT+TGG - chr4_1:84039442-84039461 None:intergenic 45.0%
!! CTCCTTTGTTGTTGCGGTTT+CGG + chr4_1:84039572-84039591 Msa0579390:intron 45.0%
TACTGTTACATGCTACCAGG+AGG - chr4_1:84039648-84039667 None:intergenic 45.0%
CTAGAAAGCAAGAAGCAAGC+CGG - chr4_1:84040098-84040117 None:intergenic 45.0%
AGGGTAATTCAGTGTTGCCA+AGG - chr4_1:84040124-84040143 None:intergenic 45.0%
CAACACTGAATTACCCTGCA+TGG + chr4_1:84040127-84040146 Msa0579390:CDS 45.0%
ACACTGAATTACCCTGCATG+GGG + chr4_1:84040129-84040148 Msa0579390:CDS 45.0%
AATTACCCTGCATGGGGATA+TGG + chr4_1:84040135-84040154 Msa0579390:CDS 45.0%
TAAGTCCATATCCCCATGCA+GGG - chr4_1:84040143-84040162 None:intergenic 45.0%
GGGGATATGGACTTAGATAC+AGG + chr4_1:84040148-84040167 Msa0579390:CDS 45.0%
AGGAGGAAGTTGCTGAAAAC+TGG + chr4_1:84040208-84040227 Msa0579390:CDS 45.0%
!! AGTTGCTGAAAACTGGCTTG+AGG + chr4_1:84040215-84040234 Msa0579390:CDS 45.0%
!! GGCTTGAGGTACTGCTTATA+TGG + chr4_1:84040229-84040248 Msa0579390:intron 45.0%
! GAAGTTATTTCAGGGCCAGA+TGG + chr4_1:84040468-84040487 Msa0579390:CDS 45.0%
CCACAATCGCAAGTTTATGG+TGG - chr4_1:84040571-84040590 None:intergenic 45.0%
CCACCATAAACTTGCGATTG+TGG + chr4_1:84040568-84040587 Msa0579390:CDS 45.0%
GGACCACAATCGCAAGTTTA+TGG - chr4_1:84040574-84040593 None:intergenic 45.0%
CTTCATGACAGCGTATGCTT+TGG - chr4_1:84040652-84040671 None:intergenic 45.0%
!! GTGGAAGCCTTGTTTCTTTG+TGG + chr4_1:84040688-84040707 Msa0579390:intron 45.0%
!! CCTTCTATTGATTCATCCCC+AGG - chr4_1:84040993-84041012 None:intergenic 45.0%
CCTGGGGATGAATCAATAGA+AGG + chr4_1:84040990-84041009 Msa0579390:CDS 45.0%
TGCAATGATATCCTGGAGAG+AGG - chr4_1:84041057-84041076 None:intergenic 45.0%
CAAAGCGTGCAATGATATCC+TGG - chr4_1:84041064-84041083 None:intergenic 45.0%
!! GCACGCTTTGAAAAGAGATC+AGG + chr4_1:84041074-84041093 Msa0579390:CDS 45.0%
GTACCACCACTTTATCTGGA+AGG - chr4_1:84041121-84041140 None:intergenic 45.0%
TCTGCATTCCTGAGCTGATT+AGG + chr4_1:84041165-84041184 Msa0579390:CDS 45.0%
GTTTAAGCTGGGAGAAAGCT+TGG + chr4_1:84041207-84041226 Msa0579390:CDS 45.0%
AAACCACACAGTTCTACCAG+AGG + chr4_1:84041404-84041423 Msa0579390:CDS 45.0%
!! TACCAGAGGCACTAGAGAAA+TGG + chr4_1:84041418-84041437 Msa0579390:CDS 45.0%
ATGGAGTTTGACTCTTCTGC+AGG + chr4_1:84041437-84041456 Msa0579390:CDS 45.0%
GGATTTACTTCCTCGACATG+TGG + chr4_1:84041458-84041477 Msa0579390:CDS 45.0%
ATAAACTCGACCACCGAATC+CGG - chr4_1:84041740-84041759 None:intergenic 45.0%
GACAAACGAGAAGCAGAAGA+TGG + chr4_1:84041899-84041918 Msa0579390:CDS 45.0%
TGATCCAAACCTGCCAATGA+TGG + chr4_1:84041967-84041986 Msa0579390:CDS 45.0%
TTAGCCATGCGAACCATCAT+TGG - chr4_1:84041983-84042002 None:intergenic 45.0%
! GCTAACCTATGTGTTGTTGG+TGG + chr4_1:84041998-84042017 Msa0579390:CDS 45.0%
CAGAAACGGATCCATCTTCT+AGG - chr4_1:84042253-84042272 None:intergenic 45.0%
GAAATTGGCTGTACTTCGCA+AGG + chr4_1:84042339-84042358 Msa0579390:CDS 45.0%
ATGTACTCACTAGCCAACTG+TGG - chr4_1:84042434-84042453 None:intergenic 45.0%
TGTGAAGTGACCTTCGACTA+AGG - chr4_1:84042512-84042531 None:intergenic 45.0%
ATGAGGATCTGCAATCAGAG+TGG + chr4_1:84042601-84042620 Msa0579390:CDS 45.0%
! AACGCCATGGCATTTTATGG+CGG + chr4_1:84043248-84043267 Msa0579390:intron 45.0%
! GTTCCTCGGGTTTGTGTTTT+TGG + chr4_1:84043831-84043850 Msa0579390:CDS 45.0%
!!! CTCGGGTTTGTGTTTTTGGA+GGG + chr4_1:84043835-84043854 Msa0579390:CDS 45.0%
TAACTACTGGGATTTGTCCC+TGG - chr4_1:84044094-84044113 None:intergenic 45.0%
TGCAAGTTAAGACACGAACC+AGG - chr4_1:84044291-84044310 None:intergenic 45.0%
!! TGGTTCGTGTCTTAACTTGC+AGG + chr4_1:84044290-84044309 Msa0579390:intron 45.0%
GTGAATTGTCCCAGCACATT+AGG + chr4_1:84044367-84044386 Msa0579390:CDS 45.0%
TGTGTTTAGTACAGCTGGGA+TGG + chr4_1:84044477-84044496 Msa0579390:intron 45.0%
GTGCAAATTGGAACTCTCGA+TGG + chr4_1:84044544-84044563 Msa0579390:CDS 45.0%
GCAAATTGGAACTCTCGATG+GGG + chr4_1:84044546-84044565 Msa0579390:CDS 45.0%
CACGAGCTGAAGAAATTGCA+GGG + chr4_1:84044623-84044642 Msa0579390:CDS 45.0%
ACTTCTTCAAACCTTGGGTC+TGG - chr4_1:84044907-84044926 None:intergenic 45.0%
CGACGAATTGATGGGATCTT+TGG + chr4_1:84044969-84044988 Msa0579390:CDS 45.0%
! GGATCTTTGGAAGGGAATGA+AGG + chr4_1:84044982-84045001 Msa0579390:CDS 45.0%
TTGGAAGGGAATGAAGGCTA+TGG + chr4_1:84044988-84045007 Msa0579390:CDS 45.0%
ATGCCTTGTCAACTTCCTCT+TGG - chr4_1:84045065-84045084 None:intergenic 45.0%
! GATGTGTGTTGGTGCAGAAA+TGG + chr4_1:84045413-84045432 Msa0579390:three_prime_UTR 45.0%
TGCCTGCAGGTTGTTGAGAA+TGG - chr4_1:84037935-84037954 None:intergenic 50.0%
CATTGGACAAGGTTGCTTGC+TGG + chr4_1:84038120-84038139 Msa0579390:intron 50.0%
ACTCTCAGGTCCTTATGCTG+AGG + chr4_1:84039486-84039505 Msa0579390:CDS 50.0%
TTCCTCAGAGCCTCAGCATA+AGG - chr4_1:84039499-84039518 None:intergenic 50.0%
AGCCGAAACCGCAACAACAA+AGG - chr4_1:84039577-84039596 None:intergenic 50.0%
GCCTAATCCTCCATTCCCAA+GGG - chr4_1:84040076-84040095 None:intergenic 50.0%
TTGGGAATGGAGGATTAGGC+CGG + chr4_1:84040076-84040095 Msa0579390:CDS 50.0%
CTAAGTCCATATCCCCATGC+AGG - chr4_1:84040144-84040163 None:intergenic 50.0%
ACGTATAACGAAGGACGGTC+AGG + chr4_1:84040188-84040207 Msa0579390:CDS 50.0%
TATAACGAAGGACGGTCAGG+AGG + chr4_1:84040191-84040210 Msa0579390:CDS 50.0%
AAGAACAAGCACGCCTGCAT+AGG - chr4_1:84040301-84040320 None:intergenic 50.0%
GTCCATTGCTTAGCTCCATC+TGG - chr4_1:84040486-84040505 None:intergenic 50.0%
GATGGAGCTAAGCAATGGAC+TGG + chr4_1:84040486-84040505 Msa0579390:CDS 50.0%
ATTATGCTCAGCCTCTCTCC+AGG + chr4_1:84041043-84041062 Msa0579390:CDS 50.0%
GGACTCCCTTCCAGATAAAG+TGG + chr4_1:84041112-84041131 Msa0579390:CDS 50.0%
CTCCCTTCCAGATAAAGTGG+TGG + chr4_1:84041115-84041134 Msa0579390:CDS 50.0%
! GCTCAGGAATGCAGAGTGTT+GGG - chr4_1:84041160-84041179 None:intergenic 50.0%
AGCTCAGGAATGCAGAGTGT+TGG - chr4_1:84041161-84041180 None:intergenic 50.0%
CTCCATTTCTCTAGTGCCTC+TGG - chr4_1:84041423-84041442 None:intergenic 50.0%
! TATTGAGTTGCCGGATTCGG+TGG + chr4_1:84041727-84041746 Msa0579390:CDS 50.0%
TCTTGCCGATGATCCTGTTG+AGG + chr4_1:84041772-84041791 Msa0579390:CDS 50.0%
CGAACCATCATTGGCAGGTT+TGG - chr4_1:84041974-84041993 None:intergenic 50.0%
ATGGGGTGACACCTAGAAGA+TGG + chr4_1:84042239-84042258 Msa0579390:CDS 50.0%
ATAGGCGACTCCTTAGTCGA+AGG + chr4_1:84042499-84042518 Msa0579390:intron 50.0%
TGTGAAAGATGGCAACGCCA+TGG + chr4_1:84043235-84043254 Msa0579390:intron 50.0%
! GGCAACGCCATGGCATTTTA+TGG + chr4_1:84043245-84043264 Msa0579390:intron 50.0%
TGATGTCAGATGGCAGACCT+TGG - chr4_1:84043311-84043330 None:intergenic 50.0%
CCTCCAAAAACACAAACCCG+AGG - chr4_1:84043837-84043856 None:intergenic 50.0%
!!! CCTCGGGTTTGTGTTTTTGG+AGG + chr4_1:84043834-84043853 Msa0579390:CDS 50.0%
GTTTAGTACAGCTGGGATGG+AGG + chr4_1:84044480-84044499 Msa0579390:intron 50.0%
GCACGAGCTGAAGAAATTGC+AGG + chr4_1:84044622-84044641 Msa0579390:CDS 50.0%
TGCAGTTTGTACCAGACCCA+AGG + chr4_1:84044893-84044912 Msa0579390:intron 50.0%
TAGGGAAGTCCTTGCCAACA+AGG - chr4_1:84045029-84045048 None:intergenic 50.0%
CAAGGACTTCCCTAGCTACT+TGG + chr4_1:84045035-84045054 Msa0579390:CDS 50.0%
CTTGGCACTCCAAGTAGCTA+GGG - chr4_1:84045047-84045066 None:intergenic 50.0%
TCTTGGCACTCCAAGTAGCT+AGG - chr4_1:84045048-84045067 None:intergenic 50.0%
! TAGCTACTTGGAGTGCCAAG+AGG + chr4_1:84045047-84045066 Msa0579390:CDS 50.0%
GTGCCAAGAGGAAGTTGACA+AGG + chr4_1:84045059-84045078 Msa0579390:CDS 50.0%
AGGTGAGCTTGAATGCCTGC+AGG - chr4_1:84037948-84037967 None:intergenic 55.0%
TGTTGCCAGCGACAAAGCAG+CGG + chr4_1:84038081-84038100 Msa0579390:CDS 55.0%
GTCCTTATGCTGAGGCTCTG+AGG + chr4_1:84039494-84039513 Msa0579390:CDS 55.0%
!! TGCTGAGGCTCTGAGGAAAC+TGG + chr4_1:84039501-84039520 Msa0579390:CDS 55.0%
!! GCTGAGGCTCTGAGGAAACT+GGG + chr4_1:84039502-84039521 Msa0579390:CDS 55.0%
GCCCTTGGGAATGGAGGATT+AGG + chr4_1:84040072-84040091 Msa0579390:CDS 55.0%
GGCCTAATCCTCCATTCCCA+AGG - chr4_1:84040077-84040096 None:intergenic 55.0%
GGCCAGATGGAGCTAAGCAA+TGG + chr4_1:84040481-84040500 Msa0579390:CDS 55.0%
!! GGAGCTAAGCAATGGACTGG+AGG + chr4_1:84040489-84040508 Msa0579390:CDS 55.0%
GTGCCTCTGGTAGAACTGTG+TGG - chr4_1:84041410-84041429 None:intergenic 55.0%
CCATGCGAACCATCATTGGC+AGG - chr4_1:84041979-84041998 None:intergenic 55.0%
CCTGCCAATGATGGTTCGCA+TGG + chr4_1:84041976-84041995 Msa0579390:CDS 55.0%
TGCTGGGACAATTCACTGCC+AGG - chr4_1:84044363-84044382 None:intergenic 55.0%
! CAGTTCCGCTGCTTTGTCGC+TGG - chr4_1:84038089-84038108 None:intergenic 60.0%
AGGAGCCAGATGCAGCCCTT+GGG + chr4_1:84040058-84040077 Msa0579390:intron 60.0%
CCATTCCCAAGGGCTGCATC+TGG - chr4_1:84040066-84040085 None:intergenic 60.0%
CCAGATGCAGCCCTTGGGAA+TGG + chr4_1:84040063-84040082 Msa0579390:CDS 60.0%
GATGCAGCCCTTGGGAATGG+AGG + chr4_1:84040066-84040085 Msa0579390:CDS 60.0%
CAGGAGCCAGATGCAGCCCT+TGG + chr4_1:84040057-84040076 Msa0579390:intron 65.0%
ACAGCTGGGATGGAGGCCAG+TGG + chr4_1:84044487-84044506 Msa0579390:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 84037690 84045886 84037690 ID=Msa0579390;Name=Msa0579390
chr4_1 mRNA 84037690 84045886 84037690 ID=Msa0579390-mRNA-1;Parent=Msa0579390;Name=Msa0579390-mRNA-1;_AED=0.09;_eAED=0.09;_QI=230|1|1|1|1|1|14|719|964
chr4_1 exon 84037690 84038130 84037690 ID=Msa0579390-mRNA-1:exon:30736;Parent=Msa0579390-mRNA-1
chr4_1 exon 84039127 84039359 84039127 ID=Msa0579390-mRNA-1:exon:30737;Parent=Msa0579390-mRNA-1
chr4_1 exon 84039451 84039552 84039451 ID=Msa0579390-mRNA-1:exon:30738;Parent=Msa0579390-mRNA-1
chr4_1 exon 84040060 84040236 84040060 ID=Msa0579390-mRNA-1:exon:30739;Parent=Msa0579390-mRNA-1
chr4_1 exon 84040408 84040683 84040408 ID=Msa0579390-mRNA-1:exon:30740;Parent=Msa0579390-mRNA-1
chr4_1 exon 84040972 84041243 84040972 ID=Msa0579390-mRNA-1:exon:30741;Parent=Msa0579390-mRNA-1
chr4_1 exon 84041389 84041506 84041389 ID=Msa0579390-mRNA-1:exon:30742;Parent=Msa0579390-mRNA-1
chr4_1 exon 84041641 84042093 84041641 ID=Msa0579390-mRNA-1:exon:30743;Parent=Msa0579390-mRNA-1
chr4_1 exon 84042208 84042360 84042208 ID=Msa0579390-mRNA-1:exon:30744;Parent=Msa0579390-mRNA-1
chr4_1 exon 84042591 84042719 84042591 ID=Msa0579390-mRNA-1:exon:30745;Parent=Msa0579390-mRNA-1
chr4_1 exon 84043723 84043959 84043723 ID=Msa0579390-mRNA-1:exon:30746;Parent=Msa0579390-mRNA-1
chr4_1 exon 84044312 84044388 84044312 ID=Msa0579390-mRNA-1:exon:30747;Parent=Msa0579390-mRNA-1
chr4_1 exon 84044486 84044672 84044486 ID=Msa0579390-mRNA-1:exon:30748;Parent=Msa0579390-mRNA-1
chr4_1 exon 84044898 84045886 84044898 ID=Msa0579390-mRNA-1:exon:30749;Parent=Msa0579390-mRNA-1
chr4_1 five_prime_UTR 84037690 84037919 84037690 ID=Msa0579390-mRNA-1:five_prime_utr;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84037920 84038130 84037920 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84039127 84039359 84039127 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84039451 84039552 84039451 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84040060 84040236 84040060 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84040408 84040683 84040408 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84040972 84041243 84040972 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84041389 84041506 84041389 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84041641 84042093 84041641 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84042208 84042360 84042208 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84042591 84042719 84042591 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84043723 84043959 84043723 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84044312 84044388 84044312 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84044486 84044672 84044486 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 CDS 84044898 84045167 84044898 ID=Msa0579390-mRNA-1:cds;Parent=Msa0579390-mRNA-1
chr4_1 three_prime_UTR 84045168 84045886 84045168 ID=Msa0579390-mRNA-1:three_prime_utr;Parent=Msa0579390-mRNA-1
Gene Sequence

>Msa0579390

ATGTCTGCTCTACCATTCTCAACAACCTGCAGGCATTCAAGCTCACCTTTACATTCCCATTCCAAATCAAACATTTGGCAGCGACAAAACAACATTTGGCAGTTGTTTGTCATCACAAAGTCAAATTCCAGAAGAGCAATTAGAAAGCTCTATGTGAAGAATGTTGCCAGCGACAAAGCAGCGGAACTGAAAGAACGACTCATTGGACAAGGCACCACTTCAAATGAATTCGTTGCAGATTCTGCATCTGTAGCTTCAAGCATAAAATATCATGCTGAGTTCACCACATCTTTTTCTCCTGAGAAATTTGAGCCCAGTAAGGCTTACTTTGCAACTGCAGAGAGTGTCCGTGATTCCCTTATCATAAATTGGAATGCAACATATGAATATTATGAGAGGGTTAATGTTAAGCAAGCTTATTACATGTCTATGGAGTATCTACAGGGTAGGGCATTGTTAAATGCAATTGGGAATTTACAACTCTCAGGTCCTTATGCTGAGGCTCTGAGGAAACTGGGTTACAATTTAGAGGATGTGGCTAATCAGGAGCCAGATGCAGCCCTTGGGAATGGAGGATTAGGCCGGCTTGCTTCTTGCTTTCTAGACTCCTTGGCAACACTGAATTACCCTGCATGGGGATATGGACTTAGATACAGGTATGGTTTATTCAAACAACGTATAACGAAGGACGGTCAGGAGGAAGTTGCTGAAAACTGGCTTGAGATGGGAAATCCCTGGGAAATTCAGAGAAACGATGTCTCTTATCCAGTTAGATTCTATGGAGAAGTTATTTCAGGGCCAGATGGAGCTAAGCAATGGACTGGAGGAGAAAGTATTTTGGCTGTTGCTTATGATGTTCCAATACCTGGATACAAAACTAGAACCACCATAAACTTGCGATTGTGGTCCTCTAAAGTTTCAACTGAAGAATTTGATTTGAAGGCTTTCAATACTGGGGATCATGCCAAAGCATACGCTGTCATGAAGAATGCAGAGAAGATCTGTTACATTCTATACCCTGGGGATGAATCAATAGAAGGCAAGACTTTACGACTAAAGCAACAATATACATTATGCTCAGCCTCTCTCCAGGATATCATTGCACGCTTTGAAAAGAGATCAGGAATGACGGTAAATTGGGACTCCCTTCCAGATAAAGTGGTGGTACAAATGAATGATACTCACCCAACACTCTGCATTCCTGAGCTGATTAGGATATTAATAGATGTGAAGGGTTTAAGCTGGGAGAAAGCTTGGGATATTACTAAAAGAACGGTTGCTTACACAAACCACACAGTTCTACCAGAGGCACTAGAGAAATGGAGTTTGACTCTTCTGCAGGATTTACTTCCTCGACATGTGGAAATAATAAAAAGGATAGATGAGGAGTTTACACATGAAGTTGTTGCTGAGTATGGGACAAATGATCTTAACATGCTGCAAGAAAAGCTCAGAAAGATGAGAATACTAGAGAATATTGAGTTGCCGGATTCGGTGGTCGAGTTTATTAACAATACAGTTCTTGCCGATGATCCTGTTGAGGAAATTGATGTTGATGATAATGATATAAAGGCAACAGAAAAGAAAGATAATGAAGAAGAAAATGATGATGATGACGGCGAAGAAGAAGAAGATGAAGTGGGGAAAGACAAACGAGAAGCAGAAGATGGTGAAGAGCTTGTTGTAGAGAACAAAAAAGAATGGAAATTTGAAGTTGATCCAAACCTGCCAATGATGGTTCGCATGGCTAACCTATGTGTTGTTGGTGGTTTTTCTGTGAACGGAGTAGCTGAGATTCACAGTGAGATTGTAAAAGAGGAAGTTTTTAATGAATTTTACGAGTTGTGGCCTGAGAAATTCCAGAATAAAACAAATGGGGTGACACCTAGAAGATGGATCCGTTTCTGTAATCCCGACCTTAGTAAAATCATAACCAAATGGATTGGAACAGAAGACTGGGTAACAGATCTTGAGAAATTGGCTGTACTTCGCAAGTTTGCAGATAATGAGGATCTGCAATCAGAGTGGATAGAATCAAAAAGGAGAAACAAGATTAACGTTGCATCATTTATCAAAGAGAAAACAGGTTATGTTGTCAGTCCAGATGCAATGTTTGATGTACAGGTAAAGCGTATTCATGAATACAAACGGCAGTTACTGAATATCATGGGAATTGTTTATCGCTACAAAAAAATGAAAGAATTGAATGCTGAGGAAAGAAAACAATTGTTTGTTCCTCGGGTTTGTGTTTTTGGAGGGAAAGCATTTGCAACATATGTTCAAGCCAAGAGGATTGTAAAATTCATCACAGATGTAGGAGCTACAGTTAATCACGATCCAGAGATTGGAGATCTTTTGAAGGTTATATTTGTTCCTGATTACAATGTTAGTGTTGCTGAAATGCTAATTCCTGGCAGTGAATTGTCCCAGCACATTAGTACAGCTGGGATGGAGGCCAGTGGAACAAGCAACATGAAATTTGCAATGAATGGATGTGTGCAAATTGGAACTCTCGATGGGGCTAATGTTGAAATAAGAGAAGAAGTTGGAGAAGACAACTTCTTTCTTTTTGGCGCACGAGCTGAAGAAATTGCAGGGTTAAGGAAAGAAAGAGCAGAAGGAAAGTTTGTACCAGACCCAAGGTTTGAAGAAGTAAAGGCATATGTTAGAAGTGGTGTTTTTGGCACCTACAACTACGACGAATTGATGGGATCTTTGGAAGGGAATGAAGGCTATGGCCGTGCTGATTATTTCCTTGTTGGCAAGGACTTCCCTAGCTACTTGGAGTGCCAAGAGGAAGTTGACAAGGCATACCGTGATCAAAAAGTAAGTAACATCAAGTCATGGACAAAACATGATATTTCGTCTATTACGTTCTTGTCGAATTCATTATGA
Protein sequence

>Msa0579390

MSALPFSTTCRHSSSPLHSHSKSNIWQRQNNIWQLFVITKSNSRRAIRKLYVKNVASDKAAELKERLIGQGTTSNEFVADSASVASSIKYHAEFTTSFSPEKFEPSKAYFATAESVRDSLIINWNATYEYYERVNVKQAYYMSMEYLQGRALLNAIGNLQLSGPYAEALRKLGYNLEDVANQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYRYGLFKQRITKDGQEEVAENWLEMGNPWEIQRNDVSYPVRFYGEVISGPDGAKQWTGGESILAVAYDVPIPGYKTRTTINLRLWSSKVSTEEFDLKAFNTGDHAKAYAVMKNAEKICYILYPGDESIEGKTLRLKQQYTLCSASLQDIIARFEKRSGMTVNWDSLPDKVVVQMNDTHPTLCIPELIRILIDVKGLSWEKAWDITKRTVAYTNHTVLPEALEKWSLTLLQDLLPRHVEIIKRIDEEFTHEVVAEYGTNDLNMLQEKLRKMRILENIELPDSVVEFINNTVLADDPVEEIDVDDNDIKATEKKDNEEENDDDDGEEEEDEVGKDKREAEDGEELVVENKKEWKFEVDPNLPMMVRMANLCVVGGFSVNGVAEIHSEIVKEEVFNEFYELWPEKFQNKTNGVTPRRWIRFCNPDLSKIITKWIGTEDWVTDLEKLAVLRKFADNEDLQSEWIESKRRNKINVASFIKEKTGYVVSPDAMFDVQVKRIHEYKRQLLNIMGIVYRYKKMKELNAEERKQLFVPRVCVFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFAMNGCVQIGTLDGANVEIREEVGEDNFFLFGARAEEIAGLRKERAEGKFVPDPRFEEVKAYVRSGVFGTYNYDELMGSLEGNEGYGRADYFLVGKDFPSYLECQEEVDKAYRDQKVSNIKSWTKHDISSITFLSNSL*