Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486920 | XP_024635441.1 | 96.512 | 688 | 22 | 2 | 1 | 687 | 1 | 687 | 0.0 | 1375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486920 | sp|Q9LG26|PARN_ARATH | 59.486 | 622 | 243 | 2 | 37 | 658 | 36 | 648 | 0.0 | 755 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486920 | A0A396ISR3 | 96.512 | 688 | 22 | 2 | 1 | 687 | 1 | 687 | 0.0 | 1375 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033950 | Msa0486920 | 0.806071 | 9.828110e-50 | -8.615850e-47 |
| Msa0034030 | Msa0486920 | 0.800466 | 1.422472e-48 | -8.615850e-47 |
| Msa0043660 | Msa0486920 | 0.810438 | 1.152657e-50 | -8.615850e-47 |
| Msa0054440 | Msa0486920 | 0.801224 | 9.961244e-49 | -8.615850e-47 |
| Msa0076780 | Msa0486920 | 0.803253 | 3.807668e-49 | -8.615850e-47 |
| Msa0127020 | Msa0486920 | 0.824060 | 9.903644e-54 | -8.615850e-47 |
| Msa0137550 | Msa0486920 | 0.815830 | 7.560259e-52 | -8.615850e-47 |
| Msa0169280 | Msa0486920 | 0.823646 | 1.238569e-53 | -8.615850e-47 |
| Msa0455540 | Msa0486920 | 0.962210 | 1.317455e-120 | -8.615850e-47 |
| Msa0241470 | Msa0486920 | 0.845462 | 4.001033e-59 | -8.615850e-47 |
| Msa0279220 | Msa0486920 | 0.830524 | 2.798039e-55 | -8.615850e-47 |
| Msa0279240 | Msa0486920 | 0.822766 | 1.986890e-53 | -8.615850e-47 |
| Msa0309750 | Msa0486920 | 0.804584 | 2.013593e-49 | -8.615850e-47 |
| Msa0318980 | Msa0486920 | 0.810793 | 9.661504e-51 | -8.615850e-47 |
| Msa0486920 | Msa0542090 | 0.855989 | 4.356762e-62 | -8.615850e-47 |
| Msa0486920 | Msa0542130 | 0.858131 | 1.016799e-62 | -8.615850e-47 |
| Msa0486920 | Msa0554290 | 0.808591 | 2.873204e-50 | -8.615850e-47 |
| Msa0486920 | Msa0605000 | 0.854252 | 1.393170e-61 | -8.615850e-47 |
| Msa0486920 | Msa0619210 | 0.804164 | 2.464079e-49 | -8.615850e-47 |
| Msa0486920 | Msa0685140 | 0.864162 | 1.482484e-64 | -8.615850e-47 |
| Msa0486920 | Msa0772480 | 0.805157 | 1.528597e-49 | -8.615850e-47 |
| Msa0486920 | Msa0819480 | 0.806174 | 9.350817e-50 | -8.615850e-47 |
| Msa0486920 | Msa0945440 | 0.865150 | 7.275265e-65 | -8.615850e-47 |
| Msa0486920 | Msa1021540 | 0.801173 | 1.020045e-48 | -8.615850e-47 |
| Msa0486920 | Msa1209760 | 0.814944 | 1.190005e-51 | -8.615850e-47 |
| Msa0486920 | Msa1219170 | 0.826481 | 2.649311e-54 | -8.615850e-47 |
| Msa0486920 | Msa1224810 | 0.809822 | 1.564767e-50 | -8.615850e-47 |
| Msa0486920 | Msa1245930 | 0.800809 | 1.210605e-48 | -8.615850e-47 |
| Msa0486920 | Msa1259060 | 0.801793 | 7.614402e-49 | -8.615850e-47 |
| Msa0486920 | Msa1294070 | 0.801207 | 1.003838e-48 | -8.615850e-47 |
| Msa0486920 | Msa1400220 | 0.805476 | 1.310587e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486920 | MtrunA17_Chr3g0102481 | 96.512 | 688 | 22 | 2 | 1 | 687 | 1 | 687 | 0.0 | 1375 |
| Msa0486920 | MtrunA17_Chr7g0234031 | 30.449 | 624 | 363 | 20 | 35 | 646 | 25 | 589 | 2.18e-70 | 241 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0486920 | AT1G55870.1 | 59.486 | 622 | 243 | 2 | 37 | 658 | 36 | 648 | 0.0 | 755 |
| Msa0486920 | AT1G55870.4 | 55.603 | 464 | 199 | 1 | 195 | 658 | 8 | 464 | 2.00e-179 | 520 |
| Msa0486920 | AT1G55870.2 | 60.580 | 345 | 129 | 1 | 314 | 658 | 1 | 338 | 5.78e-145 | 427 |
| Msa0486920 | AT1G55870.3 | 60.580 | 345 | 129 | 1 | 314 | 658 | 1 | 338 | 5.78e-145 | 427 |
| Msa0486920 | AT3G25430.1 | 27.516 | 636 | 376 | 19 | 18 | 635 | 4 | 572 | 2.65e-60 | 213 |
| Msa0486920 | AT3G25430.2 | 27.358 | 636 | 360 | 20 | 18 | 635 | 4 | 555 | 1.86e-57 | 205 |
Find 153 sgRNAs with CRISPR-Local
Find 553 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCAGGAGCTTTCTGGTTT+TGG | 0.164511 | 3_4:+5018342 | Msa0486920:CDS |
| TTTCCACGTCAGGAGCTTTC+TGG | 0.182890 | 3_4:+5018336 | Msa0486920:CDS |
| TTCCTTGTATTCAATCAATT+TGG | 0.228163 | 3_4:-5023889 | None:intergenic |
| TTGAGAACATTGTTATTATC+TGG | 0.233378 | 3_4:+5023535 | Msa0486920:CDS |
| CTCCTAAATCACTGCATAAC+TGG | 0.233696 | 3_4:-5023332 | None:intergenic |
| GCCCAGTTATGCAGTGATTT+AGG | 0.257302 | 3_4:+5023330 | Msa0486920:CDS |
| TGCTTCCCTTTCTTGTTCTC+TGG | 0.265913 | 3_4:-5018856 | None:intergenic |
| GACTACTTCGATGGATTTCT+TGG | 0.268029 | 3_4:+5018389 | Msa0486920:CDS |
| TTTCTAAATTAAATGATGTT+AGG | 0.268163 | 3_4:+5018922 | Msa0486920:CDS |
| TTCATGCGTGTTCTTCGTTC+GGG | 0.289154 | 3_4:-5016805 | None:intergenic |
| TGTAACTAGCTCGGTGCTTT+TGG | 0.289237 | 3_4:-5020188 | None:intergenic |
| CTCGTACTTCACTTGCCTTC+AGG | 0.295775 | 3_4:-5023572 | None:intergenic |
| GCATCCGCTGGGAAAACTTT+TGG | 0.305585 | 3_4:+5023752 | Msa0486920:CDS |
| AGAAACTCTGTTTGCTGATC+AGG | 0.312532 | 3_4:+5023839 | Msa0486920:CDS |
| TCACTTGCCTTCAGGTTAGA+AGG | 0.335224 | 3_4:-5023564 | None:intergenic |
| CTTAACTGATCAATTGTGTT+TGG | 0.336119 | 3_4:-5023995 | None:intergenic |
| TTTACATTCTCTTCTATAGT+TGG | 0.344960 | 3_4:-5023939 | None:intergenic |
| CATCCAGCTCTCAAGCTTGA+TGG | 0.345888 | 3_4:+5019110 | Msa0486920:CDS |
| GGCTTCTGCGCCACAGGAAT+GGG | 0.348545 | 3_4:-5024044 | None:intergenic |
| AATGTGAACAATGAGGTTTC+TGG | 0.349688 | 3_4:+5019381 | Msa0486920:CDS |
| AACAAGAAAGGGAAGCAATA+AGG | 0.360923 | 3_4:+5018862 | Msa0486920:CDS |
| CTTCATGCGTGTTCTTCGTT+CGG | 0.363263 | 3_4:-5016806 | None:intergenic |
| TTGTGGCGGTTGAAGAGGTT+AGG | 0.365222 | 3_4:-5016879 | None:intergenic |
| AGTTTGATCGCTCCGATGTT+CGG | 0.382519 | 3_4:+5017070 | Msa0486920:CDS |
| CATGTCTACAGCAAATTTAT+CGG | 0.389497 | 3_4:+5019989 | Msa0486920:CDS |
| CTGTATACACAACTATTTGT+TGG | 0.390531 | 3_4:-5019407 | None:intergenic |
| TCATTTAATTTAGAAATGTC+TGG | 0.392693 | 3_4:-5018915 | None:intergenic |
| AAGTTGAAGTTGATGATTCA+AGG | 0.401865 | 3_4:+5020230 | Msa0486920:CDS |
| TTCTAAATTAAATGATGTTA+GGG | 0.404843 | 3_4:+5018923 | Msa0486920:CDS |
| ATGGCGTGATGGGTTATTAC+AGG | 0.412013 | 3_4:+5019010 | Msa0486920:CDS |
| GGATGAACTAAACTTACTTC+TGG | 0.413972 | 3_4:+5019437 | Msa0486920:CDS |
| TGTTCTCAAACAAAATTTGT+TGG | 0.415338 | 3_4:-5023521 | None:intergenic |
| TGAGAACATTGTTATTATCT+GGG | 0.418628 | 3_4:+5023536 | Msa0486920:CDS |
| TGGCTTCTGCGCCACAGGAA+TGG | 0.419149 | 3_4:-5024045 | None:intergenic |
| AGCGGATGCAAAACCGAGAT+TGG | 0.425664 | 3_4:-5023738 | None:intergenic |
| GATGCTTATAAAGAAATTTG+TGG | 0.441063 | 3_4:+5023804 | Msa0486920:CDS |
| GAACATCGGAGCGATCAAAC+TGG | 0.442573 | 3_4:-5017068 | None:intergenic |
| CAAGTTGGCTTCTGCGCCAC+AGG | 0.442981 | 3_4:-5024050 | None:intergenic |
| GGTTATTACAGGAGCAAAAT+CGG | 0.443983 | 3_4:+5019021 | Msa0486920:CDS |
| TACATGCATTAAAATCAAAC+TGG | 0.446942 | 3_4:-5018419 | None:intergenic |
| TGTATACACAACTATTTGTT+GGG | 0.447606 | 3_4:-5019406 | None:intergenic |
| TCGGCGTTTGTCCTTTCCGA+TGG | 0.449616 | 3_4:+5017139 | Msa0486920:CDS |
| AGGTTCGCCGTTGTTCAGTT+CGG | 0.453497 | 3_4:+5017120 | Msa0486920:CDS |
| TGTCTGGACACTCACTATCA+TGG | 0.458158 | 3_4:-5018899 | None:intergenic |
| TTGGAGCCAGCAGCAATTTG+TGG | 0.460161 | 3_4:-5020169 | None:intergenic |
| ATTTATCCAGAGAACAAGAA+AGG | 0.462100 | 3_4:+5018850 | Msa0486920:CDS |
| CTAATTATGTGTACACCATC+AGG | 0.464455 | 3_4:+5024083 | Msa0486920:three_prime_UTR |
| TGTGGCGGTTGAAGAGGTTA+GGG | 0.473888 | 3_4:-5016878 | None:intergenic |
| CCTGCCTCATGCTTGCCTCC+AGG | 0.474138 | 3_4:-5023276 | None:intergenic |
| AGAAATCCATCGAAGTAGTC+TGG | 0.482313 | 3_4:-5018386 | None:intergenic |
| AAACTTCGAATCGTCGTTAG+CGG | 0.483892 | 3_4:+5016957 | Msa0486920:CDS |
| TGTAGTTTCTGTCTACCACT+TGG | 0.491252 | 3_4:+5023626 | Msa0486920:CDS |
| GCAAACAGAGTTTCTGATAA+GGG | 0.491406 | 3_4:-5023831 | None:intergenic |
| CGGCGTTTGTCCTTTCCGAT+GGG | 0.493200 | 3_4:+5017140 | Msa0486920:CDS |
| CTTGTAGAAGGAGGTAAAAG+AGG | 0.494009 | 3_4:+5019765 | Msa0486920:intron |
| CTGAACAACGGCGAACCTAC+TGG | 0.497338 | 3_4:-5017115 | None:intergenic |
| TCAGAACAGAAGTTGATAGT+TGG | 0.502195 | 3_4:+5019859 | Msa0486920:CDS |
| TATATCTTAGTTATATGCAT+GGG | 0.502273 | 3_4:+5023427 | Msa0486920:CDS |
| AATCGTCGTTAGCGGAGCTC+CGG | 0.504255 | 3_4:+5016965 | Msa0486920:CDS |
| GGATATGATGCTTTCATGAC+TGG | 0.504444 | 3_4:+5023297 | Msa0486920:CDS |
| AGCAAACAGAGTTTCTGATA+AGG | 0.504846 | 3_4:-5023832 | None:intergenic |
| TACACTAGAAACAAATTGAA+TGG | 0.506219 | 3_4:-5024111 | None:intergenic |
| GAAAGCTTAGAGAGAAGTAA+TGG | 0.511591 | 3_4:+5023714 | Msa0486920:CDS |
| TGGCAGAGAAATTCATTACA+TGG | 0.515487 | 3_4:-5018366 | None:intergenic |
| TCAGCTTAAGTTGATTCAGT+TGG | 0.517220 | 3_4:+5019145 | Msa0486920:CDS |
| ACGGATATGCCACGAAGGAC+TGG | 0.517851 | 3_4:-5017173 | None:intergenic |
| CCTGGAGGCAAGCATGAGGC+AGG | 0.518137 | 3_4:+5023276 | Msa0486920:CDS |
| AACCAAATTGATTGAATACA+AGG | 0.519448 | 3_4:+5023887 | Msa0486920:CDS |
| AGATCGTCCAGCTGGAATCC+TGG | 0.520249 | 3_4:+5023258 | Msa0486920:intron |
| CTTCGTTCGGGGTTTAGAAG+AGG | 0.521139 | 3_4:-5016793 | None:intergenic |
| TAGAAGAGGGATAACGAGAG+AGG | 0.521961 | 3_4:-5016779 | None:intergenic |
| AGGTAAAAGAGGAGAATCAA+AGG | 0.522105 | 3_4:+5019776 | Msa0486920:CDS |
| GGCGAAATCCAACTGCAGCT+TGG | 0.522198 | 3_4:-5019816 | None:intergenic |
| TCCTAAATCACTGCATAACT+GGG | 0.523426 | 3_4:-5023331 | None:intergenic |
| TTTATCCAGAGAACAAGAAA+GGG | 0.523900 | 3_4:+5018851 | Msa0486920:CDS |
| TGAAAGATAAGTTCAGTGAA+TGG | 0.529459 | 3_4:+5018991 | Msa0486920:CDS |
| GAATTTGCAGATCGTCCAGC+TGG | 0.533683 | 3_4:+5023250 | Msa0486920:intron |
| TTCGTCTAACCAGTCCTTCG+TGG | 0.534068 | 3_4:+5017164 | Msa0486920:CDS |
| TTCGAAGTTTGCAACGGTGA+CGG | 0.534899 | 3_4:-5016944 | None:intergenic |
| GCTGATCAGGCAAAGGCAGT+TGG | 0.534922 | 3_4:+5023852 | Msa0486920:CDS |
| GCAACGGTGACGGTCTTCGA+TGG | 0.535587 | 3_4:-5016934 | None:intergenic |
| TTCGTTCGGGGTTTAGAAGA+GGG | 0.536392 | 3_4:-5016792 | None:intergenic |
| AATCGGTCAGACCAAATTCA+AGG | 0.539111 | 3_4:+5019038 | Msa0486920:CDS |
| AAGTTCAGTGAATGGCGTGA+TGG | 0.547765 | 3_4:+5018999 | Msa0486920:CDS |
| CTATATCTTAGTTATATGCA+TGG | 0.549824 | 3_4:+5023426 | Msa0486920:CDS |
| AGTTCAGTGAATGGCGTGAT+GGG | 0.550536 | 3_4:+5019000 | Msa0486920:CDS |
| CCGACGATCGGACATGGTGC+CGG | 0.551309 | 3_4:-5016984 | None:intergenic |
| TTCCTTCAACAAAAGAAAGT+CGG | 0.553574 | 3_4:-5023694 | None:intergenic |
| AAACTGGAATGAATCACGCC+AGG | 0.554543 | 3_4:-5017052 | None:intergenic |
| CGGTGGTGTGGTTGTTGTGG+CGG | 0.555354 | 3_4:-5016893 | None:intergenic |
| GTCTGGACACTCACTATCAT+GGG | 0.555910 | 3_4:-5018898 | None:intergenic |
| GGTTGTTGTGGCGGTTGAAG+AGG | 0.557395 | 3_4:-5016884 | None:intergenic |
| GATATTATAGATCTAAATAC+CGG | 0.557851 | 3_4:+5023450 | Msa0486920:CDS |
| GGGATTTCCTTCTAACCTGA+AGG | 0.558626 | 3_4:+5023557 | Msa0486920:CDS |
| CTTGCCTCCAGGATTCCAGC+TGG | 0.558683 | 3_4:-5023265 | None:intergenic |
| CAAAGGCAGTTGGCATGAAG+TGG | 0.559051 | 3_4:+5023862 | Msa0486920:CDS |
| TCAACTTCTGTTCTGATGAA+AGG | 0.559958 | 3_4:-5019852 | None:intergenic |
| GAGAAGTAATGGTCCAATCT+CGG | 0.560192 | 3_4:+5023725 | Msa0486920:CDS |
| CGTGATAGTGTCGAAGAAGA+AGG | 0.563909 | 3_4:-5016841 | None:intergenic |
| ATGAAGATCCAAGCTGCAGT+TGG | 0.563917 | 3_4:+5019808 | Msa0486920:CDS |
| AATCCATCAAGCTTGAGAGC+TGG | 0.565036 | 3_4:-5019113 | None:intergenic |
| AGGCAAGCCGCCCATTCCTG+TGG | 0.568539 | 3_4:+5024034 | Msa0486920:three_prime_UTR |
| GCCATCGACCTCGAGATGAC+CGG | 0.569325 | 3_4:+5017015 | Msa0486920:CDS |
| TTGCGGTGGTGTGGTTGTTG+TGG | 0.569522 | 3_4:-5016896 | None:intergenic |
| TTTAATGCATGTATACATGA+AGG | 0.569703 | 3_4:+5018429 | Msa0486920:CDS |
| TCTCTGCCAGACTACTTCGA+TGG | 0.569944 | 3_4:+5018380 | Msa0486920:CDS |
| TTCTGCGCCACAGGAATGGG+CGG | 0.570014 | 3_4:-5024041 | None:intergenic |
| CGAAGTCCGACGATCGGACA+TGG | 0.576467 | 3_4:-5016990 | None:intergenic |
| TTGGGATGGTGTAACTAGCT+CGG | 0.581065 | 3_4:-5020197 | None:intergenic |
| CGTCTCTTGAGGTTATAGCT+TGG | 0.582065 | 3_4:-5023495 | None:intergenic |
| TGGCGACGAAGTCCGACGAT+CGG | 0.583110 | 3_4:-5016996 | None:intergenic |
| GAGAACATTGTTATTATCTG+GGG | 0.588898 | 3_4:+5023537 | Msa0486920:CDS |
| CTCCGATGTTCGGTATCTCA+AGG | 0.590111 | 3_4:+5017080 | Msa0486920:CDS |
| GGTAAAAGAGGAGAATCAAA+GGG | 0.595963 | 3_4:+5019777 | Msa0486920:CDS |
| AGGTTAGAGACTCCGCCAGT+AGG | 0.598496 | 3_4:+5017100 | Msa0486920:CDS |
| TCCGGTCATCTCGAGGTCGA+TGG | 0.602825 | 3_4:-5017016 | None:intergenic |
| TCTGTTTGCTGATCAGGCAA+AGG | 0.603663 | 3_4:+5023845 | Msa0486920:CDS |
| ATGTCTGCCATGTTGACAGA+AGG | 0.603946 | 3_4:-5018951 | None:intergenic |
| TTATATCAATGTGAACAATG+AGG | 0.605285 | 3_4:+5019374 | Msa0486920:CDS |
| TTGTAACTCCGGTCATCTCG+AGG | 0.608427 | 3_4:-5017023 | None:intergenic |
| TCATGCGTGTTCTTCGTTCG+GGG | 0.609189 | 3_4:-5016804 | None:intergenic |
| AAACCAGAAAGCTCCTGACG+TGG | 0.613387 | 3_4:-5018339 | None:intergenic |
| CCGGAGTTACAAGTTCTCCC+TGG | 0.615817 | 3_4:+5017034 | Msa0486920:CDS |
| TTTGTTGGTACCGTCTCTTG+AGG | 0.616510 | 3_4:-5023506 | None:intergenic |
| CCGGCACCATGTCCGATCGT+CGG | 0.619938 | 3_4:+5016984 | Msa0486920:CDS |
| CCAGGGAGAACTTGTAACTC+CGG | 0.620061 | 3_4:-5017034 | None:intergenic |
| TAAGAAATGTTCAATCTCGT+AGG | 0.624237 | 3_4:+5024014 | Msa0486920:three_prime_UTR |
| TGATTCACATTGCGGTGGTG+TGG | 0.624689 | 3_4:-5016905 | None:intergenic |
| GGCAGAGAAATTCATTACAT+GGG | 0.625343 | 3_4:-5018365 | None:intergenic |
| TTGAATACAAGGAATCATTG+AGG | 0.627788 | 3_4:+5023898 | Msa0486920:CDS |
| GGACATACCTTCTGTCAACA+TGG | 0.630760 | 3_4:+5018944 | Msa0486920:CDS |
| AACTGGAATGAATCACGCCA+GGG | 0.631908 | 3_4:-5017051 | None:intergenic |
| GAATCCTGGAGGCAAGCATG+AGG | 0.641547 | 3_4:+5023272 | Msa0486920:CDS |
| AATAGTTGTGTATACAGACT+CGG | 0.645056 | 3_4:+5019413 | Msa0486920:CDS |
| ATATCTTAGTTATATGCATG+GGG | 0.647653 | 3_4:+5023428 | Msa0486920:CDS |
| ACTGGTTAGACGAATCCCAT+CGG | 0.648981 | 3_4:-5017155 | None:intergenic |
| AATTGAATGGTGCATCCTGA+TGG | 0.654552 | 3_4:-5024098 | None:intergenic |
| ACAAACGCCGAACTGAACAA+CGG | 0.666707 | 3_4:-5017127 | None:intergenic |
| AACCTTGAGATACCGAACAT+CGG | 0.667246 | 3_4:-5017082 | None:intergenic |
| ATGAAAGGAGATCAATAACA+TGG | 0.667767 | 3_4:-5019837 | None:intergenic |
| CGACGATTCGAAGTTTGCAA+CGG | 0.670188 | 3_4:-5016950 | None:intergenic |
| CAAGCTATAACCTCAAGAGA+CGG | 0.676408 | 3_4:+5023496 | Msa0486920:CDS |
| GGAAACGCTGATTCACATTG+CGG | 0.692132 | 3_4:-5016913 | None:intergenic |
| AACGCTGATTCACATTGCGG+TGG | 0.693300 | 3_4:-5016910 | None:intergenic |
| TGGAAAGCACTTGTTAACAG+AGG | 0.695071 | 3_4:-5020044 | None:intergenic |
| TTAGACGAATCCCATCGGAA+AGG | 0.705477 | 3_4:-5017150 | None:intergenic |
| ACAAAACATAGAAAATGCAG+AGG | 0.706266 | 3_4:-5020146 | None:intergenic |
| AACAACGGCGAACCTACTGG+CGG | 0.710795 | 3_4:-5017112 | None:intergenic |
| AATCAACTTAAGCTGACGTG+AGG | 0.725978 | 3_4:-5019138 | None:intergenic |
| TCGTCCAGCTGGAATCCTGG+AGG | 0.728618 | 3_4:+5023261 | Msa0486920:CDS |
| ACACTGCTGTTGCATCCAAG+TGG | 0.730685 | 3_4:-5023641 | None:intergenic |
| GTGTTACGGATATGCCACGA+AGG | 0.738897 | 3_4:-5017178 | None:intergenic |
| AGTTGTGTATACAGACTCGG+AGG | 0.742262 | 3_4:+5019416 | Msa0486920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTCTTTTATTTTATACA+TGG | + | chr3_4:5018597-5018616 | Msa0486920:intron | 10.0% |
| !! | AAATTGAAAATACATATAAT+TGG | + | chr3_4:5020754-5020773 | Msa0486920:intron | 10.0% |
| !! | AATTGAAAATACATATAATT+GGG | + | chr3_4:5020755-5020774 | Msa0486920:intron | 10.0% |
| !! | TAAGTATAAATGGAAAATTA+AGG | + | chr3_4:5017382-5017401 | Msa0486920:intron | 15.0% |
| !! | AAAGAAATAAAAAATTAACC+AGG | - | chr3_4:5018586-5018605 | None:intergenic | 15.0% |
| !! | TTTCTAAATTAAATGATGTT+AGG | + | chr3_4:5018922-5018941 | Msa0486920:CDS | 15.0% |
| !! | TTCTAAATTAAATGATGTTA+GGG | + | chr3_4:5018923-5018942 | Msa0486920:CDS | 15.0% |
| !!! | TCATCTTTTAATATTATTTG+TGG | - | chr3_4:5019608-5019627 | None:intergenic | 15.0% |
| !! | AATTAAATCAATATCTGAAT+GGG | - | chr3_4:5020579-5020598 | None:intergenic | 15.0% |
| !! | AAATTAAATCAATATCTGAA+TGG | - | chr3_4:5020580-5020599 | None:intergenic | 15.0% |
| !!! | ATTTTTTCTTTTTACTGATT+TGG | + | chr3_4:5021280-5021299 | Msa0486920:intron | 15.0% |
| !!! | TTTTTTTCAAATTTTCACTT+TGG | + | chr3_4:5021360-5021379 | Msa0486920:intron | 15.0% |
| !!! | AACATTTGTTCTTTTAAATT+TGG | - | chr3_4:5024144-5024163 | None:intergenic | 15.0% |
| !!! | TAATTTTAACCAAATCAAAA+GGG | - | chr3_4:5024193-5024212 | None:intergenic | 15.0% |
| !! | ATTCATCAATCAAATTCTAT+TGG | - | chr3_4:5017765-5017784 | None:intergenic | 20.0% |
| !! | AATTATTGAGTGAAATTCAT+TGG | + | chr3_4:5017966-5017985 | Msa0486920:intron | 20.0% |
| !! | CATTTGAATTAAGAAAATGA+TGG | - | chr3_4:5018257-5018276 | None:intergenic | 20.0% |
| !! | TTAGCTAACTAATAGAATAA+AGG | + | chr3_4:5018506-5018525 | Msa0486920:intron | 20.0% |
| !!! | TCATTTAATTTAGAAATGTC+TGG | - | chr3_4:5018918-5018937 | None:intergenic | 20.0% |
| !!! | GATTATAAGTTTGAAATTTC+AGG | + | chr3_4:5019323-5019342 | Msa0486920:intron | 20.0% |
| !!! | ACTCTAGTTTTAGTTATAAA+TGG | + | chr3_4:5019582-5019601 | Msa0486920:intron | 20.0% |
| !! | GAGATTAAAGAACATTTATT+AGG | - | chr3_4:5019746-5019765 | None:intergenic | 20.0% |
| !! | ATTAAATCAATATCTGAATG+GGG | - | chr3_4:5020578-5020597 | None:intergenic | 20.0% |
| !! | GTAAAAAGAAAAAATGTACA+AGG | - | chr3_4:5021275-5021294 | None:intergenic | 20.0% |
| !! | AATTTAGTCAAAATCTGAAT+TGG | + | chr3_4:5021426-5021445 | Msa0486920:intron | 20.0% |
| !! | ATTTAGTCAAAATCTGAATT+GGG | + | chr3_4:5021427-5021446 | Msa0486920:intron | 20.0% |
| !! | TTTCATTAGAAAAAGTGAAA+AGG | + | chr3_4:5021591-5021610 | Msa0486920:intron | 20.0% |
| !! | CAAATAAAAAAACTGTACAA+TGG | + | chr3_4:5023020-5023039 | Msa0486920:intron | 20.0% |
| !! | AAATTATGTAGACAGAAAAA+TGG | - | chr3_4:5023071-5023090 | None:intergenic | 20.0% |
| !! | TATATCTTAGTTATATGCAT+GGG | + | chr3_4:5023427-5023446 | Msa0486920:CDS | 20.0% |
| !! | GATATTATAGATCTAAATAC+CGG | + | chr3_4:5023450-5023469 | Msa0486920:CDS | 20.0% |
| !!! | AATTTTAACCAAATCAAAAG+GGG | - | chr3_4:5024192-5024211 | None:intergenic | 20.0% |
| !!! | CTAATTTTAACCAAATCAAA+AGG | - | chr3_4:5024194-5024213 | None:intergenic | 20.0% |
| !!! | CTTTTGATTTGGTTAAAATT+AGG | + | chr3_4:5024192-5024211 | Msa0486920:three_prime_UTR | 20.0% |
| !!! | TCTCTTTTGTTTTTGAGAAA+TGG | + | chr3_4:5017220-5017239 | Msa0486920:intron | 25.0% |
| ! | ATAGATAGATAGATTCCTTA+GGG | + | chr3_4:5017319-5017338 | Msa0486920:intron | 25.0% |
| ! | AATTAAAGTAAGACTCTTAG+TGG | + | chr3_4:5017671-5017690 | Msa0486920:intron | 25.0% |
| !!! | TTTGACATTTTTTGTAATGC+TGG | + | chr3_4:5017698-5017717 | Msa0486920:intron | 25.0% |
| ! | TAAAACTGTTCAAGTAATAG+TGG | + | chr3_4:5017730-5017749 | Msa0486920:intron | 25.0% |
| ! | TTTGATTGATGAATCATGAT+TGG | + | chr3_4:5017771-5017790 | Msa0486920:intron | 25.0% |
| ! | TTGATTGATGAATCATGATT+GGG | + | chr3_4:5017772-5017791 | Msa0486920:intron | 25.0% |
| ! | CATATATCTACAAAAACATG+TGG | - | chr3_4:5017830-5017849 | None:intergenic | 25.0% |
| ! | TTTGTAGATATATGTTTGTC+AGG | + | chr3_4:5017836-5017855 | Msa0486920:intron | 25.0% |
| ! | ATTTACTAAGTCTAAACCAA+CGG | - | chr3_4:5018139-5018158 | None:intergenic | 25.0% |
| ! | GTTTAGACTTAGTAAATGTT+AGG | + | chr3_4:5018142-5018161 | Msa0486920:intron | 25.0% |
| ! | TACATGCATTAAAATCAAAC+TGG | - | chr3_4:5018422-5018441 | None:intergenic | 25.0% |
| ! | TTTAATGCATGTATACATGA+AGG | + | chr3_4:5018429-5018448 | Msa0486920:CDS | 25.0% |
| !!! | TTATTTTGTGCTATTAGCTT+TGG | + | chr3_4:5018468-5018487 | Msa0486920:intron | 25.0% |
| ! | TACATGGAAAAACTAAAATG+TGG | + | chr3_4:5018613-5018632 | Msa0486920:intron | 25.0% |
| ! | TTTGCATATAACCATTACAT+CGG | - | chr3_4:5018691-5018710 | None:intergenic | 25.0% |
| ! | AGAAATCATTGAAGTCATAA+TGG | - | chr3_4:5018786-5018805 | None:intergenic | 25.0% |
| !! | ATTTGTCTTTTCTCTCATAT+TGG | + | chr3_4:5019209-5019228 | Msa0486920:intron | 25.0% |
| ! | TTATATCAATGTGAACAATG+AGG | + | chr3_4:5019374-5019393 | Msa0486920:CDS | 25.0% |
| ! | TGTATACACAACTATTTGTT+GGG | - | chr3_4:5019409-5019428 | None:intergenic | 25.0% |
| ! | CCACATATCAAAAATTACAA+AGG | - | chr3_4:5019493-5019512 | None:intergenic | 25.0% |
| !! | CCTTTGTAATTTTTGATATG+TGG | + | chr3_4:5019490-5019509 | Msa0486920:intron | 25.0% |
| ! | CAAAATAATATAGCCTGTTA+AGG | - | chr3_4:5019922-5019941 | None:intergenic | 25.0% |
| !!! | GGCTATATTATTTTGTAAGA+CGG | + | chr3_4:5019927-5019946 | Msa0486920:intron | 25.0% |
| !! | TTCAACTTTTACTTTCACTT+GGG | - | chr3_4:5020218-5020237 | None:intergenic | 25.0% |
| ! | TGAAAGAGTTGTAAAAATGA+AGG | - | chr3_4:5020354-5020373 | None:intergenic | 25.0% |
| !!! | TTTTAGCTTAATTGCACTTT+TGG | + | chr3_4:5020452-5020471 | Msa0486920:intron | 25.0% |
| !! | AAATTGCTCATTTGAAACTA+CGG | - | chr3_4:5020517-5020536 | None:intergenic | 25.0% |
| !! | TAGTTTCAAATGAGCAATTT+TGG | + | chr3_4:5020517-5020536 | Msa0486920:intron | 25.0% |
| ! | AAAAAAGGGATAAACTATAG+GGG | - | chr3_4:5020543-5020562 | None:intergenic | 25.0% |
| ! | CAAAAAAGGGATAAACTATA+GGG | - | chr3_4:5020544-5020563 | None:intergenic | 25.0% |
| ! | TCAAAAAAGGGATAAACTAT+AGG | - | chr3_4:5020545-5020564 | None:intergenic | 25.0% |
| ! | TTAAATCAATATCTGAATGG+GGG | - | chr3_4:5020577-5020596 | None:intergenic | 25.0% |
| ! | ATTGTTTCAAATATCCACTT+TGG | - | chr3_4:5020656-5020675 | None:intergenic | 25.0% |
| !! | TCTTCACATTTTCAGAATTA+GGG | - | chr3_4:5020793-5020812 | None:intergenic | 25.0% |
| !! | TTCTTCACATTTTCAGAATT+AGG | - | chr3_4:5020794-5020813 | None:intergenic | 25.0% |
| ! | TTGAAAAACAATGAATTGTC+AGG | - | chr3_4:5021014-5021033 | None:intergenic | 25.0% |
| ! | TTTAGTCAAAATCTGAATTG+GGG | + | chr3_4:5021428-5021447 | Msa0486920:intron | 25.0% |
| !! | TTAGTTACAAATGAGCATTT+TGG | - | chr3_4:5021487-5021506 | None:intergenic | 25.0% |
| ! | AAAATGCTCATTTGTAACTA+AGG | + | chr3_4:5021486-5021505 | Msa0486920:intron | 25.0% |
| ! | AAATGCTCATTTGTAACTAA+GGG | + | chr3_4:5021487-5021506 | Msa0486920:intron | 25.0% |
| !! | TTTTACTGTTAGAAAAACAG+AGG | - | chr3_4:5021563-5021582 | None:intergenic | 25.0% |
| ! | TTCAACTATCTTCAAATCAA+GGG | - | chr3_4:5022166-5022185 | None:intergenic | 25.0% |
| ! | TTTCAACTATCTTCAAATCA+AGG | - | chr3_4:5022167-5022186 | None:intergenic | 25.0% |
| ! | ATTTGAAGATAGTTGAAACT+TGG | + | chr3_4:5022169-5022188 | Msa0486920:intron | 25.0% |
| ! | TTTGAAGATAGTTGAAACTT+GGG | + | chr3_4:5022170-5022189 | Msa0486920:intron | 25.0% |
| ! | TTTGACATTTCTGATATAAG+AGG | - | chr3_4:5022137-5022156 | None:intergenic | 25.0% |
| ! | TTTATTTGCCATAAAAGAGT+AGG | - | chr3_4:5023008-5023027 | None:intergenic | 25.0% |
| ! | ATAAAAAAACTGTACAATGG+CGG | + | chr3_4:5023023-5023042 | Msa0486920:intron | 25.0% |
| ! | GGAAGGAAAATTAATATAAG+AGG | - | chr3_4:5023171-5023190 | None:intergenic | 25.0% |
| ! | ATGAAAGGAACAATAAAAAG+AGG | - | chr3_4:5023215-5023234 | None:intergenic | 25.0% |
| !!! | ACATTTTTTGTTGGTATGAA+AGG | - | chr3_4:5023230-5023249 | None:intergenic | 25.0% |
| !!! | TGCAAATTCACATTTTTTGT+TGG | - | chr3_4:5023239-5023258 | None:intergenic | 25.0% |
| !!! | CTAATTGTTTTGAAGATTCA+TGG | - | chr3_4:5023371-5023390 | None:intergenic | 25.0% |
| ! | CTATATCTTAGTTATATGCA+TGG | + | chr3_4:5023426-5023445 | Msa0486920:CDS | 25.0% |
| ! | ATATCTTAGTTATATGCATG+GGG | + | chr3_4:5023428-5023447 | Msa0486920:CDS | 25.0% |
| !! | AGAATTTTCAACTGTATAAC+CGG | - | chr3_4:5023472-5023491 | None:intergenic | 25.0% |
| ! | TGTTCTCAAACAAAATTTGT+TGG | - | chr3_4:5023524-5023543 | None:intergenic | 25.0% |
| !! | TTGAGAACATTGTTATTATC+TGG | + | chr3_4:5023535-5023554 | Msa0486920:CDS | 25.0% |
| !! | TGAGAACATTGTTATTATCT+GGG | + | chr3_4:5023536-5023555 | Msa0486920:CDS | 25.0% |
| !!! | GAGTGTTTATCTAAAGTTTT+CGG | + | chr3_4:5023594-5023613 | Msa0486920:CDS | 25.0% |
| ! | GATGCTTATAAAGAAATTTG+TGG | + | chr3_4:5023804-5023823 | Msa0486920:CDS | 25.0% |
| ! | AACCAAATTGATTGAATACA+AGG | + | chr3_4:5023887-5023906 | Msa0486920:CDS | 25.0% |
| ! | TTCCTTGTATTCAATCAATT+TGG | - | chr3_4:5023892-5023911 | None:intergenic | 25.0% |
| ! | TTTACATTCTCTTCTATAGT+TGG | - | chr3_4:5023942-5023961 | None:intergenic | 25.0% |
| ! | TACACTAGAAACAAATTGAA+TGG | - | chr3_4:5024114-5024133 | None:intergenic | 25.0% |
| GATAGATAGATAGATTCCTT+AGG | + | chr3_4:5017318-5017337 | Msa0486920:intron | 30.0% | |
| TTGGTTGAACTCAATGTTAT+TGG | + | chr3_4:5017351-5017370 | Msa0486920:intron | 30.0% | |
| ATGGAAAATTAAGGCATGTT+TGG | + | chr3_4:5017391-5017410 | Msa0486920:intron | 30.0% | |
| ! | ATGTTCCATAACTTTTACAC+GGG | - | chr3_4:5018014-5018033 | None:intergenic | 30.0% |
| ! | CATGTTCCATAACTTTTACA+CGG | - | chr3_4:5018015-5018034 | None:intergenic | 30.0% |
| TATTTCACCAAAAAAGAGAG+AGG | + | chr3_4:5018039-5018058 | Msa0486920:intron | 30.0% | |
| TCTAAATGGAATACATATGC+TGG | + | chr3_4:5018101-5018120 | Msa0486920:intron | 30.0% | |
| GCAAGTTTCTAAATTAGAAC+AGG | - | chr3_4:5018290-5018309 | None:intergenic | 30.0% | |
| AAATGTGGATTCTACACATA+TGG | + | chr3_4:5018628-5018647 | Msa0486920:intron | 30.0% | |
| AATGTGGATTCTACACATAT+GGG | + | chr3_4:5018629-5018648 | Msa0486920:intron | 30.0% | |
| TCATGATAAAACCGATGTAA+TGG | + | chr3_4:5018677-5018696 | Msa0486920:intron | 30.0% | |
| AGGTCATAGGAAATTTGAAT+AGG | + | chr3_4:5018739-5018758 | Msa0486920:intron | 30.0% | |
| AGGAAATTTGAATAGGCATT+TGG | + | chr3_4:5018746-5018765 | Msa0486920:intron | 30.0% | |
| ATTTATCCAGAGAACAAGAA+AGG | + | chr3_4:5018850-5018869 | Msa0486920:CDS | 30.0% | |
| TTTATCCAGAGAACAAGAAA+GGG | + | chr3_4:5018851-5018870 | Msa0486920:CDS | 30.0% | |
| TGAAAGATAAGTTCAGTGAA+TGG | + | chr3_4:5018991-5019010 | Msa0486920:CDS | 30.0% | |
| ! | CATCATCTATTCACTTCTTT+TGG | + | chr3_4:5019243-5019262 | Msa0486920:intron | 30.0% |
| CTGTATACACAACTATTTGT+TGG | - | chr3_4:5019410-5019429 | None:intergenic | 30.0% | |
| AATAGTTGTGTATACAGACT+CGG | + | chr3_4:5019413-5019432 | Msa0486920:CDS | 30.0% | |
| !!! | TCTACATTGGCATTGATTTT+TGG | + | chr3_4:5019514-5019533 | Msa0486920:intron | 30.0% |
| ! | TTTGGTTTAGAATCTTGAGA+TGG | + | chr3_4:5019532-5019551 | Msa0486920:intron | 30.0% |
| CCTATGCTAATAGAGTATAA+AGG | - | chr3_4:5019633-5019652 | None:intergenic | 30.0% | |
| CCTTTATACTCTATTAGCAT+AGG | + | chr3_4:5019630-5019649 | Msa0486920:intron | 30.0% | |
| TGCTGTAACATCAATAAACT+CGG | - | chr3_4:5019711-5019730 | None:intergenic | 30.0% | |
| CATTTATTAGGAACCCAATA+CGG | - | chr3_4:5019734-5019753 | None:intergenic | 30.0% | |
| GTTCTTTAATCTCTTGTAGA+AGG | + | chr3_4:5019753-5019772 | Msa0486920:intron | 30.0% | |
| ATGAAAGGAGATCAATAACA+TGG | - | chr3_4:5019840-5019859 | None:intergenic | 30.0% | |
| !!! | GTTGGTCATAACTGTTTTTT+AGG | + | chr3_4:5019877-5019896 | Msa0486920:CDS | 30.0% |
| TGACATTCTTAATCCTTAAC+AGG | + | chr3_4:5019906-5019925 | Msa0486920:intron | 30.0% | |
| CATGTCTACAGCAAATTTAT+CGG | + | chr3_4:5019989-5020008 | Msa0486920:CDS | 30.0% | |
| !!! | TGGACTTTTTCATTCTTTCT+TGG | - | chr3_4:5020114-5020133 | None:intergenic | 30.0% |
| ACAAAACATAGAAAATGCAG+AGG | - | chr3_4:5020149-5020168 | None:intergenic | 30.0% | |
| ! | CTTCAACTTTTACTTTCACT+TGG | - | chr3_4:5020219-5020238 | None:intergenic | 30.0% |
| !! | AAGTTGAAGTTGATGATTCA+AGG | + | chr3_4:5020230-5020249 | Msa0486920:CDS | 30.0% |
| ATATAACCTTTGCATTACTG+GGG | - | chr3_4:5020401-5020420 | None:intergenic | 30.0% | |
| CATATAACCTTTGCATTACT+GGG | - | chr3_4:5020402-5020421 | None:intergenic | 30.0% | |
| !! | CAATTGATTTGAGAAACTAG+AGG | - | chr3_4:5020480-5020499 | None:intergenic | 30.0% |
| ! | AATTGCTCATTTGAAACTAC+GGG | - | chr3_4:5020516-5020535 | None:intergenic | 30.0% |
| TAAATCAATATCTGAATGGG+GGG | - | chr3_4:5020576-5020595 | None:intergenic | 30.0% | |
| ATGTGAAGAATACGAATTAG+AGG | + | chr3_4:5020804-5020823 | Msa0486920:intron | 30.0% | |
| TGAAGACAAATTGAAGATGA+GGG | - | chr3_4:5021041-5021060 | None:intergenic | 30.0% | |
| TTGAAGACAAATTGAAGATG+AGG | - | chr3_4:5021042-5021061 | None:intergenic | 30.0% | |
| TTAAAAATGTCGATGAACGA+TGG | - | chr3_4:5021074-5021093 | None:intergenic | 30.0% | |
| GACACATGTATCATTTCTAT+TGG | - | chr3_4:5021386-5021405 | None:intergenic | 30.0% | |
| TTAGTCAAAATCTGAATTGG+GGG | + | chr3_4:5021429-5021448 | Msa0486920:intron | 30.0% | |
| TCACACAATTAGAAAATGAG+AGG | + | chr3_4:5021518-5021537 | Msa0486920:intron | 30.0% | |
| CACACAATTAGAAAATGAGA+GGG | + | chr3_4:5021519-5021538 | Msa0486920:intron | 30.0% | |
| ACACAATTAGAAAATGAGAG+GGG | + | chr3_4:5021520-5021539 | Msa0486920:intron | 30.0% | |
| TGATTGTAGCAAATGTGTTT+AGG | + | chr3_4:5021626-5021645 | Msa0486920:intron | 30.0% | |
| ATCATCAACTACGAAGATAA+GGG | + | chr3_4:5021805-5021824 | Msa0486920:intron | 30.0% | |
| ATCTTTCTATCTATCCAGTT+AGG | + | chr3_4:5021836-5021855 | Msa0486920:intron | 30.0% | |
| TCTTTCTATCTATCCAGTTA+GGG | + | chr3_4:5021837-5021856 | Msa0486920:intron | 30.0% | |
| CTATATAAAGCTGCTTGTAA+CGG | - | chr3_4:5021977-5021996 | None:intergenic | 30.0% | |
| AAACACACTATAACTAAGCT+AGG | + | chr3_4:5022102-5022121 | Msa0486920:intron | 30.0% | |
| TCTGATATAAGAGATGTAGT+TGG | - | chr3_4:5022128-5022147 | None:intergenic | 30.0% | |
| AAACACACTATAACTAAGCT+AGG | + | chr3_4:5022102-5022121 | Msa0486920:intron | 30.0% | |
| TTCCACTATCTTCAAATCAA+GGG | - | chr3_4:5022324-5022343 | None:intergenic | 30.0% | |
| TTTCCACTATCTTCAAATCA+AGG | - | chr3_4:5022325-5022344 | None:intergenic | 30.0% | |
| !! | ATTTGAAGATAGTGGAAACT+TGG | + | chr3_4:5022327-5022346 | Msa0486920:intron | 30.0% |
| !! | TTTGAAGATAGTGGAAACTT+GGG | + | chr3_4:5022328-5022347 | Msa0486920:intron | 30.0% |
| ! | ATGTGAACTTCTTAACTTGA+GGG | + | chr3_4:5022653-5022672 | Msa0486920:intron | 30.0% |
| ! | GAAACATTCCTACTCTTTTA+TGG | + | chr3_4:5022997-5023016 | Msa0486920:intron | 30.0% |
| ! | CATAATTTGCATATAGCTTG+AGG | + | chr3_4:5023083-5023102 | Msa0486920:intron | 30.0% |
| ! | GAGAACATTGTTATTATCTG+GGG | + | chr3_4:5023537-5023556 | Msa0486920:CDS | 30.0% |
| TTCCTTCAACAAAAGAAAGT+CGG | - | chr3_4:5023697-5023716 | None:intergenic | 30.0% | |
| TTGAATACAAGGAATCATTG+AGG | + | chr3_4:5023898-5023917 | Msa0486920:CDS | 30.0% | |
| CTTAACTGATCAATTGTGTT+TGG | - | chr3_4:5023998-5024017 | None:intergenic | 30.0% | |
| TAAGAAATGTTCAATCTCGT+AGG | + | chr3_4:5024014-5024033 | Msa0486920:three_prime_UTR | 30.0% | |
| ATTAGCCAAAAATCACAAGT+TGG | - | chr3_4:5024068-5024087 | None:intergenic | 30.0% | |
| ! | GGTGTTACGCTAAGTATAAA+TGG | + | chr3_4:5017372-5017391 | Msa0486920:intron | 35.0% |
| ACAGCTTATCTAAGTGCTTA+AGG | + | chr3_4:5017418-5017437 | Msa0486920:intron | 35.0% | |
| CCACGATAACTTAATGAACA+CGG | - | chr3_4:5017563-5017582 | None:intergenic | 35.0% | |
| ATTGATGAATCATGATTGGG+AGG | + | chr3_4:5017775-5017794 | Msa0486920:intron | 35.0% | |
| ! | GTTGCTAGTGCTTTTCTAAA+TGG | + | chr3_4:5018087-5018106 | Msa0486920:intron | 35.0% |
| GTTGTAAATACAGTAGCTTC+TGG | + | chr3_4:5018202-5018221 | Msa0486920:intron | 35.0% | |
| ! | AATACAGTAGCTTCTGGAAA+TGG | + | chr3_4:5018208-5018227 | Msa0486920:intron | 35.0% |
| ! | TTAGAAACTTGCTCTTTCTC+AGG | + | chr3_4:5018298-5018317 | Msa0486920:intron | 35.0% |
| ! | TTTCTATGTTTTTCCACGTC+AGG | + | chr3_4:5018326-5018345 | Msa0486920:CDS | 35.0% |
| GGCAGAGAAATTCATTACAT+GGG | - | chr3_4:5018368-5018387 | None:intergenic | 35.0% | |
| TGGCAGAGAAATTCATTACA+TGG | - | chr3_4:5018369-5018388 | None:intergenic | 35.0% | |
| CTATAACTTTGATGCTTGAG+TGG | + | chr3_4:5018653-5018672 | Msa0486920:intron | 35.0% | |
| TGGTTATATGCAAACCTGAA+AGG | + | chr3_4:5018697-5018716 | Msa0486920:intron | 35.0% | |
| ATACATGACTCTTAGGTCAT+AGG | + | chr3_4:5018726-5018745 | Msa0486920:intron | 35.0% | |
| ATATCCCTGACATTATCCAA+GGG | - | chr3_4:5018827-5018846 | None:intergenic | 35.0% | |
| AACAAGAAAGGGAAGCAATA+AGG | + | chr3_4:5018862-5018881 | Msa0486920:CDS | 35.0% | |
| GGTTATTACAGGAGCAAAAT+CGG | + | chr3_4:5019021-5019040 | Msa0486920:CDS | 35.0% | |
| !! | CTTTTCGAGATCCTTGAATT+TGG | - | chr3_4:5019052-5019071 | None:intergenic | 35.0% |
| !! | TCAGCTTAAGTTGATTCAGT+TGG | + | chr3_4:5019145-5019164 | Msa0486920:CDS | 35.0% |
| ATAGTATTGTGCATGTGCTA+AGG | + | chr3_4:5019277-5019296 | Msa0486920:intron | 35.0% | |
| AATGTGAACAATGAGGTTTC+TGG | + | chr3_4:5019381-5019400 | Msa0486920:CDS | 35.0% | |
| GGATGAACTAAACTTACTTC+TGG | + | chr3_4:5019437-5019456 | Msa0486920:CDS | 35.0% | |
| ! | TTTGATATGTGGCTCTACAT+TGG | + | chr3_4:5019501-5019520 | Msa0486920:intron | 35.0% |
| TTAGAATCTTGAGATGGCTA+AGG | + | chr3_4:5019538-5019557 | Msa0486920:intron | 35.0% | |
| GTTCAACCTATACTACACAT+GGG | - | chr3_4:5019659-5019678 | None:intergenic | 35.0% | |
| TGTTCAACCTATACTACACA+TGG | - | chr3_4:5019660-5019679 | None:intergenic | 35.0% | |
| CTTTAATCTCTTGTAGAAGG+AGG | + | chr3_4:5019756-5019775 | Msa0486920:intron | 35.0% | |
| AGGTAAAAGAGGAGAATCAA+AGG | + | chr3_4:5019776-5019795 | Msa0486920:CDS | 35.0% | |
| GGTAAAAGAGGAGAATCAAA+GGG | + | chr3_4:5019777-5019796 | Msa0486920:CDS | 35.0% | |
| TCAACTTCTGTTCTGATGAA+AGG | - | chr3_4:5019855-5019874 | None:intergenic | 35.0% | |
| !! | TCAGAACAGAAGTTGATAGT+TGG | + | chr3_4:5019859-5019878 | Msa0486920:CDS | 35.0% |
| CATGAGCAATATCTGTATCA+TGG | - | chr3_4:5019973-5019992 | None:intergenic | 35.0% | |
| !!! | AACAAACTTTTCTGGAGTCT+CGG | - | chr3_4:5020023-5020042 | None:intergenic | 35.0% |
| ! | ATTTTCGTGTCAACAATGTG+TGG | - | chr3_4:5020067-5020086 | None:intergenic | 35.0% |
| ! | ACTTTTACTTTCACTTGGGA+TGG | - | chr3_4:5020214-5020233 | None:intergenic | 35.0% |
| CCATATAACCTTTGCATTAC+TGG | - | chr3_4:5020403-5020422 | None:intergenic | 35.0% | |
| CCAGTAATGCAAAGGTTATA+TGG | + | chr3_4:5020400-5020419 | Msa0486920:intron | 35.0% | |
| ! | ATTGCTCATTTGAAACTACG+GGG | - | chr3_4:5020515-5020534 | None:intergenic | 35.0% |
| GGGGCTATGAAATCAAAAAA+GGG | - | chr3_4:5020557-5020576 | None:intergenic | 35.0% | |
| TACGAATTAGAGGAGAAACA+CGG | + | chr3_4:5020814-5020833 | Msa0486920:intron | 35.0% | |
| TAACAACAACGTGTACTGTT+GGG | - | chr3_4:5021117-5021136 | None:intergenic | 35.0% | |
| TTAACAACAACGTGTACTGT+TGG | - | chr3_4:5021118-5021137 | None:intergenic | 35.0% | |
| GTACAAGGAATGCGAAAAAT+AGG | - | chr3_4:5021260-5021279 | None:intergenic | 35.0% | |
| TAGAAAGGGGATAAACTAGA+AGG | + | chr3_4:5021460-5021479 | Msa0486920:intron | 35.0% | |
| AGAAAGGGGATAAACTAGAA+GGG | + | chr3_4:5021461-5021480 | Msa0486920:intron | 35.0% | |
| AATGTGTTAAAGCTGACAGT+TGG | - | chr3_4:5021773-5021792 | None:intergenic | 35.0% | |
| GATCATCAACTACGAAGATA+AGG | + | chr3_4:5021804-5021823 | Msa0486920:intron | 35.0% | |
| CCAAAAATTTGATCCCTAAC+TGG | - | chr3_4:5021853-5021872 | None:intergenic | 35.0% | |
| ! | CCAGTTAGGGATCAAATTTT+TGG | + | chr3_4:5021850-5021869 | Msa0486920:intron | 35.0% |
| TCAGGTGTAAAATTCAGAGA+GGG | + | chr3_4:5021887-5021906 | Msa0486920:intron | 35.0% | |
| ! | CAGCTTTATATAGAAGCTGA+AGG | + | chr3_4:5021984-5022003 | Msa0486920:intron | 35.0% |
| !! | ACACATGTCAGTTTTGTAAC+AGG | - | chr3_4:5022031-5022050 | None:intergenic | 35.0% |
| TATGAATAGCTGTCAAGTGA+CGG | - | chr3_4:5022054-5022073 | None:intergenic | 35.0% | |
| AAGATAGTTGAAACTTGGGA+TGG | + | chr3_4:5022174-5022193 | Msa0486920:intron | 35.0% | |
| TATGAATAGCTGTCAAGTGA+CGG | - | chr3_4:5022054-5022073 | None:intergenic | 35.0% | |
| ! | TCTGATATAAGAGGTGTAGT+TGG | - | chr3_4:5022286-5022305 | None:intergenic | 35.0% |
| ! | ATCCCTTGATTTGAAGATAG+TGG | + | chr3_4:5022161-5022180 | Msa0486920:intron | 35.0% |
| !! | CTATTTTGGATAACATGGTG+TGG | - | chr3_4:5022394-5022413 | None:intergenic | 35.0% |
| !! | ATGGGCTATTTTGGATAACA+TGG | - | chr3_4:5022399-5022418 | None:intergenic | 35.0% |
| TGAAATGTCCTATCGAAGAT+GGG | - | chr3_4:5022417-5022436 | None:intergenic | 35.0% | |
| TTGAAATGTCCTATCGAAGA+TGG | - | chr3_4:5022418-5022437 | None:intergenic | 35.0% | |
| ! | TCTATGTCTGTTGTTTATGC+GGG | - | chr3_4:5022513-5022532 | None:intergenic | 35.0% |
| ! | CTCTATGTCTGTTGTTTATG+CGG | - | chr3_4:5022514-5022533 | None:intergenic | 35.0% |
| !! | AGTTTTGTACCTATGTCTGA+CGG | + | chr3_4:5022532-5022551 | Msa0486920:intron | 35.0% |
| AAGTTAAGAAGTTCACATGG+CGG | - | chr3_4:5022651-5022670 | None:intergenic | 35.0% | |
| CTCAAGTTAAGAAGTTCACA+TGG | - | chr3_4:5022654-5022673 | None:intergenic | 35.0% | |
| ! | CATGTGAACTTCTTAACTTG+AGG | + | chr3_4:5022652-5022671 | Msa0486920:intron | 35.0% |
| ! | AACACATCTTTGAAGATGCA+GGG | + | chr3_4:5022880-5022899 | Msa0486920:intron | 35.0% |
| TCTCAAAAAACCACTGTTGT+CGG | - | chr3_4:5022979-5022998 | None:intergenic | 35.0% | |
| TCCTAAATCACTGCATAACT+GGG | - | chr3_4:5023334-5023353 | None:intergenic | 35.0% | |
| ! | TTCCGACTTTCTTTTGTTGA+AGG | + | chr3_4:5023692-5023711 | Msa0486920:CDS | 35.0% |
| GAAAGCTTAGAGAGAAGTAA+TGG | + | chr3_4:5023714-5023733 | Msa0486920:CDS | 35.0% | |
| GCAAACAGAGTTTCTGATAA+GGG | - | chr3_4:5023834-5023853 | None:intergenic | 35.0% | |
| AGCAAACAGAGTTTCTGATA+AGG | - | chr3_4:5023835-5023854 | None:intergenic | 35.0% | |
| ! | AGAAGCCAACTTGTGATTTT+TGG | + | chr3_4:5024060-5024079 | Msa0486920:three_prime_UTR | 35.0% |
| CTAATTATGTGTACACCATC+AGG | + | chr3_4:5024083-5024102 | Msa0486920:three_prime_UTR | 35.0% | |
| AAACTTCGAATCGTCGTTAG+CGG | + | chr3_4:5016957-5016976 | Msa0486920:CDS | 40.0% | |
| AACCTTGAGATACCGAACAT+CGG | - | chr3_4:5017085-5017104 | None:intergenic | 40.0% | |
| TTCCTTAGGGTGTATGTGTT+TGG | + | chr3_4:5017332-5017351 | Msa0486920:intron | 40.0% | |
| AACCAAACACATACACCCTA+AGG | - | chr3_4:5017337-5017356 | None:intergenic | 40.0% | |
| CCGTGTTCATTAAGTTATCG+TGG | + | chr3_4:5017560-5017579 | Msa0486920:intron | 40.0% | |
| !! | GTTGTTTCTATAAGCTAGCC+TGG | + | chr3_4:5017604-5017623 | Msa0486920:intron | 40.0% |
| AACATGTTCATAAGCTCTCC+AGG | - | chr3_4:5017625-5017644 | None:intergenic | 40.0% | |
| !! | GAGGCATTGCAATTTCATGA+TGG | + | chr3_4:5017794-5017813 | Msa0486920:intron | 40.0% |
| TGAGTCCCGTGTAAAAGTTA+TGG | + | chr3_4:5018006-5018025 | Msa0486920:intron | 40.0% | |
| !!! | CCAACATCCTCTCTCTTTTT+TGG | - | chr3_4:5018049-5018068 | None:intergenic | 40.0% |
| CCAAAAAAGAGAGAGGATGT+TGG | + | chr3_4:5018046-5018065 | Msa0486920:intron | 40.0% | |
| AAAAGAGAGAGGATGTTGGA+AGG | + | chr3_4:5018050-5018069 | Msa0486920:intron | 40.0% | |
| CTGGTATGAATGTTATCCGT+TGG | + | chr3_4:5018120-5018139 | Msa0486920:intron | 40.0% | |
| AGAAATCCATCGAAGTAGTC+TGG | - | chr3_4:5018389-5018408 | None:intergenic | 40.0% | |
| ! | GACTACTTCGATGGATTTCT+TGG | + | chr3_4:5018389-5018408 | Msa0486920:CDS | 40.0% |
| TGACCTAAGAGTCATGTATC+TGG | - | chr3_4:5018725-5018744 | None:intergenic | 40.0% | |
| GATATCCCTGACATTATCCA+AGG | - | chr3_4:5018828-5018847 | None:intergenic | 40.0% | |
| AATCGGTCAGACCAAATTCA+AGG | + | chr3_4:5019038-5019057 | Msa0486920:CDS | 40.0% | |
| AATCAACTTAAGCTGACGTG+AGG | - | chr3_4:5019141-5019160 | None:intergenic | 40.0% | |
| ! | CATGTGCTAAGGTTTTACAC+TGG | + | chr3_4:5019288-5019307 | Msa0486920:intron | 40.0% |
| TTGATGTTACAGCACCGTAT+TGG | + | chr3_4:5019717-5019736 | Msa0486920:intron | 40.0% | |
| TGATGTTACAGCACCGTATT+GGG | + | chr3_4:5019718-5019737 | Msa0486920:intron | 40.0% | |
| CTTGTAGAAGGAGGTAAAAG+AGG | + | chr3_4:5019765-5019784 | Msa0486920:intron | 40.0% | |
| !!! | ACAAACTTTTCTGGAGTCTC+GGG | - | chr3_4:5020022-5020041 | None:intergenic | 40.0% |
| ! | ACAGAGGCAACAAACTTTTC+TGG | - | chr3_4:5020031-5020050 | None:intergenic | 40.0% |
| !! | TGGAAAGCACTTGTTAACAG+AGG | - | chr3_4:5020047-5020066 | None:intergenic | 40.0% |
| ! | TTTTGTCCACAAATTGCTGC+TGG | + | chr3_4:5020163-5020182 | Msa0486920:CDS | 40.0% |
| ATCTTACCCCAGTAATGCAA+AGG | + | chr3_4:5020392-5020411 | Msa0486920:intron | 40.0% | |
| ! | TTGCTCATTTGAAACTACGG+GGG | - | chr3_4:5020514-5020533 | None:intergenic | 40.0% |
| GGGGGCTATGAAATCAAAAA+AGG | - | chr3_4:5020558-5020577 | None:intergenic | 40.0% | |
| GACCCATGTTTCGTTTCTAT+TGG | + | chr3_4:5020630-5020649 | Msa0486920:intron | 40.0% | |
| GGCCAATAGAAACGAAACAT+GGG | - | chr3_4:5020635-5020654 | None:intergenic | 40.0% | |
| TGGCCAATAGAAACGAAACA+TGG | - | chr3_4:5020636-5020655 | None:intergenic | 40.0% | |
| TTCGTTTCTATTGGCCAAAG+TGG | + | chr3_4:5020639-5020658 | Msa0486920:intron | 40.0% | |
| GACAAATCAGAGGAGAAACA+TGG | + | chr3_4:5020841-5020860 | Msa0486920:intron | 40.0% | |
| !! | GACGAAGACGAAGGTATTAA+CGG | + | chr3_4:5020880-5020899 | Msa0486920:intron | 40.0% |
| !! | GGCGATGACAAAGGTATTAA+CGG | + | chr3_4:5020901-5020920 | Msa0486920:intron | 40.0% |
| ATGGAGAATACGACAGTTGA+TGG | + | chr3_4:5020954-5020973 | Msa0486920:intron | 40.0% | |
| AAAATGTCGATGAACGATGG+AGG | - | chr3_4:5021071-5021090 | None:intergenic | 40.0% | |
| AATGCAAACGAAGATGGCAA+GGG | - | chr3_4:5021202-5021221 | None:intergenic | 40.0% | |
| AAATGCAAACGAAGATGGCA+AGG | - | chr3_4:5021203-5021222 | None:intergenic | 40.0% | |
| GACGAAAATGCAAACGAAGA+TGG | - | chr3_4:5021208-5021227 | None:intergenic | 40.0% | |
| CAAAATCTGAATTGGGGGTA+TGG | + | chr3_4:5021434-5021453 | Msa0486920:intron | 40.0% | |
| ! | TTGGGGGTATGGAATTAGAA+AGG | + | chr3_4:5021445-5021464 | Msa0486920:intron | 40.0% |
| ! | TGGGGGTATGGAATTAGAAA+GGG | + | chr3_4:5021446-5021465 | Msa0486920:intron | 40.0% |
| ! | CAGAGGCTTAATTGCACTTT+TGG | - | chr3_4:5021546-5021565 | None:intergenic | 40.0% |
| GAGTTTCTCTCTTAAGTGGA+TGG | - | chr3_4:5021658-5021677 | None:intergenic | 40.0% | |
| GTTGGAGTTTCTCTCTTAAG+TGG | - | chr3_4:5021662-5021681 | None:intergenic | 40.0% | |
| TAACAATACACAGAGTCACC+AGG | + | chr3_4:5021712-5021731 | Msa0486920:intron | 40.0% | |
| TTGGTTTAGTCGTGCCAAAT+TGG | - | chr3_4:5021740-5021759 | None:intergenic | 40.0% | |
| !! | ATCTTCGTAGTTGATGATCG+TGG | - | chr3_4:5021803-5021822 | None:intergenic | 40.0% |
| CTCAGGTGTAAAATTCAGAG+AGG | + | chr3_4:5021886-5021905 | Msa0486920:intron | 40.0% | |
| !! | AAGATAGTGGAAACTTGGGA+TGG | + | chr3_4:5022332-5022351 | Msa0486920:intron | 40.0% |
| CTTGGGATGGTTGTAGAAAT+TGG | + | chr3_4:5022345-5022364 | Msa0486920:intron | 40.0% | |
| !!! | CTATCGAAGATGGGCTATTT+TGG | - | chr3_4:5022408-5022427 | None:intergenic | 40.0% |
| CAAAATAGCCCATCTTCGAT+AGG | + | chr3_4:5022406-5022425 | Msa0486920:intron | 40.0% | |
| !! | AATGGGCTTCCAGTTTTTAG+GGG | - | chr3_4:5022464-5022483 | None:intergenic | 40.0% |
| !! | GAATGGGCTTCCAGTTTTTA+GGG | - | chr3_4:5022465-5022484 | None:intergenic | 40.0% |
| TGACAACCATTGTGTCGAAT+GGG | - | chr3_4:5022481-5022500 | None:intergenic | 40.0% | |
| TCTTAAAAGCCGTCAGACAT+AGG | - | chr3_4:5022544-5022563 | None:intergenic | 40.0% | |
| !! | ATGTCTGACGGCTTTTAAGA+AGG | + | chr3_4:5022544-5022563 | Msa0486920:intron | 40.0% |
| ! | AAACACGGCTTGCTTCAAAA+TGG | + | chr3_4:5022600-5022619 | Msa0486920:intron | 40.0% |
| AGTTAAGAAGTTCACATGGC+GGG | - | chr3_4:5022650-5022669 | None:intergenic | 40.0% | |
| ! | TGAACTTCTTAACTTGAGGG+AGG | + | chr3_4:5022656-5022675 | Msa0486920:intron | 40.0% |
| ! | GAACTTCTTAACTTGAGGGA+GGG | + | chr3_4:5022657-5022676 | Msa0486920:intron | 40.0% |
| ! | AACTTCTTAACTTGAGGGAG+GGG | + | chr3_4:5022658-5022677 | Msa0486920:intron | 40.0% |
| ! | GAACACATCTTTGAAGATGC+AGG | + | chr3_4:5022879-5022898 | Msa0486920:intron | 40.0% |
| CTCAAAAAACCACTGTTGTC+GGG | - | chr3_4:5022978-5022997 | None:intergenic | 40.0% | |
| TAAGATAACACGGAAACGGA+AGG | - | chr3_4:5023188-5023207 | None:intergenic | 40.0% | |
| CAGCTAAGATAACACGGAAA+CGG | - | chr3_4:5023192-5023211 | None:intergenic | 40.0% | |
| AAGAGGCAGCTAAGATAACA+CGG | - | chr3_4:5023198-5023217 | None:intergenic | 40.0% | |
| GGATATGATGCTTTCATGAC+TGG | + | chr3_4:5023297-5023316 | Msa0486920:CDS | 40.0% | |
| CTCCTAAATCACTGCATAAC+TGG | - | chr3_4:5023335-5023354 | None:intergenic | 40.0% | |
| CAAGCTATAACCTCAAGAGA+CGG | + | chr3_4:5023496-5023515 | Msa0486920:CDS | 40.0% | |
| TGTAGTTTCTGTCTACCACT+TGG | + | chr3_4:5023626-5023645 | Msa0486920:CDS | 40.0% | |
| GAGAAGTAATGGTCCAATCT+CGG | + | chr3_4:5023725-5023744 | Msa0486920:CDS | 40.0% | |
| ! | AGAAACTCTGTTTGCTGATC+AGG | + | chr3_4:5023839-5023858 | Msa0486920:CDS | 40.0% |
| AATTGAATGGTGCATCCTGA+TGG | - | chr3_4:5024101-5024120 | None:intergenic | 40.0% | |
| !! | AGAAGTCACCCCTTTTGATT+TGG | + | chr3_4:5024181-5024200 | Msa0486920:three_prime_UTR | 40.0% |
| TAGAAGAGGGATAACGAGAG+AGG | - | chr3_4:5016782-5016801 | None:intergenic | 45.0% | |
| TTCGTTCGGGGTTTAGAAGA+GGG | - | chr3_4:5016795-5016814 | None:intergenic | 45.0% | |
| TTCATGCGTGTTCTTCGTTC+GGG | - | chr3_4:5016808-5016827 | None:intergenic | 45.0% | |
| CTTCATGCGTGTTCTTCGTT+CGG | - | chr3_4:5016809-5016828 | None:intergenic | 45.0% | |
| ! | CGTGATAGTGTCGAAGAAGA+AGG | - | chr3_4:5016844-5016863 | None:intergenic | 45.0% |
| !! | GGAAACGCTGATTCACATTG+CGG | - | chr3_4:5016916-5016935 | None:intergenic | 45.0% |
| TTCGAAGTTTGCAACGGTGA+CGG | - | chr3_4:5016947-5016966 | None:intergenic | 45.0% | |
| CGACGATTCGAAGTTTGCAA+CGG | - | chr3_4:5016953-5016972 | None:intergenic | 45.0% | |
| AACTGGAATGAATCACGCCA+GGG | - | chr3_4:5017054-5017073 | None:intergenic | 45.0% | |
| AAACTGGAATGAATCACGCC+AGG | - | chr3_4:5017055-5017074 | None:intergenic | 45.0% | |
| AGTTTGATCGCTCCGATGTT+CGG | + | chr3_4:5017070-5017089 | Msa0486920:CDS | 45.0% | |
| ACAAACGCCGAACTGAACAA+CGG | - | chr3_4:5017130-5017149 | None:intergenic | 45.0% | |
| TTAGACGAATCCCATCGGAA+AGG | - | chr3_4:5017153-5017172 | None:intergenic | 45.0% | |
| ACTGGTTAGACGAATCCCAT+CGG | - | chr3_4:5017158-5017177 | None:intergenic | 45.0% | |
| !! | AGAGAGAGAGAGAGGTGTTA+CGG | - | chr3_4:5017195-5017214 | None:intergenic | 45.0% |
| AGAGATAGAGAGAGAGAGAG+AGG | - | chr3_4:5017203-5017222 | None:intergenic | 45.0% | |
| GGGACTCATTCTCAAAGTAG+TGG | - | chr3_4:5017994-5018013 | None:intergenic | 45.0% | |
| GCACCACTATCTGCTGTAAA+AGG | + | chr3_4:5018536-5018555 | Msa0486920:intron | 45.0% | |
| ! | GGACCTTTTACAGCAGATAG+TGG | - | chr3_4:5018542-5018561 | None:intergenic | 45.0% |
| CTATCTGCTGTAAAAGGTCC+TGG | + | chr3_4:5018542-5018561 | Msa0486920:intron | 45.0% | |
| ! | TCATGTATCTGGAGCCTTTC+AGG | - | chr3_4:5018714-5018733 | None:intergenic | 45.0% |
| GCTCCAGATACATGACTCTT+AGG | + | chr3_4:5018719-5018738 | Msa0486920:intron | 45.0% | |
| AGTTTGAGAGTTTGCACCCT+TGG | + | chr3_4:5018808-5018827 | Msa0486920:intron | 45.0% | |
| TTGCACCCTTGGATAATGTC+AGG | + | chr3_4:5018819-5018838 | Msa0486920:intron | 45.0% | |
| TGCACCCTTGGATAATGTCA+GGG | + | chr3_4:5018820-5018839 | Msa0486920:intron | 45.0% | |
| TGCTTCCCTTTCTTGTTCTC+TGG | - | chr3_4:5018859-5018878 | None:intergenic | 45.0% | |
| GTCTGGACACTCACTATCAT+GGG | - | chr3_4:5018901-5018920 | None:intergenic | 45.0% | |
| TGTCTGGACACTCACTATCA+TGG | - | chr3_4:5018902-5018921 | None:intergenic | 45.0% | |
| GGACATACCTTCTGTCAACA+TGG | + | chr3_4:5018944-5018963 | Msa0486920:CDS | 45.0% | |
| ATGTCTGCCATGTTGACAGA+AGG | - | chr3_4:5018954-5018973 | None:intergenic | 45.0% | |
| AAGTTCAGTGAATGGCGTGA+TGG | + | chr3_4:5018999-5019018 | Msa0486920:CDS | 45.0% | |
| AGTTCAGTGAATGGCGTGAT+GGG | + | chr3_4:5019000-5019019 | Msa0486920:CDS | 45.0% | |
| !! | ATGGCGTGATGGGTTATTAC+AGG | + | chr3_4:5019010-5019029 | Msa0486920:CDS | 45.0% |
| AATCCATCAAGCTTGAGAGC+TGG | - | chr3_4:5019116-5019135 | None:intergenic | 45.0% | |
| AGTTGTGTATACAGACTCGG+AGG | + | chr3_4:5019416-5019435 | Msa0486920:CDS | 45.0% | |
| AGGCATCCCATGTGTAGTAT+AGG | + | chr3_4:5019650-5019669 | Msa0486920:intron | 45.0% | |
| ATGAAGATCCAAGCTGCAGT+TGG | + | chr3_4:5019808-5019827 | Msa0486920:CDS | 45.0% | |
| ! | TGCAGAGGCAAGTGATTTTC+TGG | - | chr3_4:5020134-5020153 | None:intergenic | 45.0% |
| !!! | TGTAACTAGCTCGGTGCTTT+TGG | - | chr3_4:5020191-5020210 | None:intergenic | 45.0% |
| TTGGGATGGTGTAACTAGCT+CGG | - | chr3_4:5020200-5020219 | None:intergenic | 45.0% | |
| GGTATTAACGGCGATGACAA+AGG | + | chr3_4:5020892-5020911 | Msa0486920:intron | 45.0% | |
| !! | GACAAAGGTATTAACGGCGA+TGG | + | chr3_4:5020907-5020926 | Msa0486920:intron | 45.0% |
| ! | AAGGTATTAACGGCGATGGA+AGG | + | chr3_4:5020911-5020930 | Msa0486920:intron | 45.0% |
| !! | GAGAATACGACAGTTGATGG+AGG | + | chr3_4:5020957-5020976 | Msa0486920:intron | 45.0% |
| !! | ATACGACAGTTGATGGAGGA+AGG | + | chr3_4:5020961-5020980 | Msa0486920:intron | 45.0% |
| GAGGAAAACGAATACGACGA+CGG | - | chr3_4:5021180-5021199 | None:intergenic | 45.0% | |
| ! | GGGGGTATGGAATTAGAAAG+GGG | + | chr3_4:5021447-5021466 | Msa0486920:intron | 45.0% |
| ! | AGTCATGACTGGTTAGGATC+TGG | - | chr3_4:5021686-5021705 | None:intergenic | 45.0% |
| TGTTACTCGTGAGTCATGAC+TGG | - | chr3_4:5021697-5021716 | None:intergenic | 45.0% | |
| !! | TCGTAGTTGATGATCGTGGA+CGG | - | chr3_4:5021799-5021818 | None:intergenic | 45.0% |
| TGAAGGTTACCTGCTATAGC+AGG | + | chr3_4:5022001-5022020 | Msa0486920:intron | 45.0% | |
| ACAGGTTAACCTGCTATAGC+AGG | - | chr3_4:5022013-5022032 | None:intergenic | 45.0% | |
| GTGTTTCAGCTATGTACAGC+TGG | - | chr3_4:5022088-5022107 | None:intergenic | 45.0% | |
| GTGTTTCAGCTATGTACAGC+TGG | - | chr3_4:5022088-5022107 | None:intergenic | 45.0% | |
| !! | AATTGGTGTCAGCACCAAAG+TGG | + | chr3_4:5022362-5022381 | Msa0486920:intron | 45.0% |
| TTGGATAACATGGTGTGGAC+AGG | - | chr3_4:5022389-5022408 | None:intergenic | 45.0% | |
| GCAATTTCCCCCCTAAAAAC+TGG | + | chr3_4:5022452-5022471 | Msa0486920:intron | 45.0% | |
| !! | ATGGGCTTCCAGTTTTTAGG+GGG | - | chr3_4:5022463-5022482 | None:intergenic | 45.0% |
| !! | CGAATGGGCTTCCAGTTTTT+AGG | - | chr3_4:5022466-5022485 | None:intergenic | 45.0% |
| GTGACAACCATTGTGTCGAA+TGG | - | chr3_4:5022482-5022501 | None:intergenic | 45.0% | |
| CGTTGAATCTCAGACTCGAA+CGG | - | chr3_4:5022570-5022589 | None:intergenic | 45.0% | |
| ! | CGTTCGAGTCTGAGATTCAA+CGG | + | chr3_4:5022568-5022587 | Msa0486920:intron | 45.0% |
| ! | GTCTGAGATTCAACGGTTGA+CGG | + | chr3_4:5022575-5022594 | Msa0486920:intron | 45.0% |
| ! | TCTGAGATTCAACGGTTGAC+GGG | + | chr3_4:5022576-5022595 | Msa0486920:intron | 45.0% |
| ! | ACGGCTTGCTTCAAAATGGA+GGG | + | chr3_4:5022604-5022623 | Msa0486920:intron | 45.0% |
| GTTAAGAAGTTCACATGGCG+GGG | - | chr3_4:5022649-5022668 | None:intergenic | 45.0% | |
| ! | ACTTCTTAACTTGAGGGAGG+GGG | + | chr3_4:5022659-5022678 | Msa0486920:intron | 45.0% |
| GAAAGGATGGTTACCGAACA+CGG | + | chr3_4:5022775-5022794 | Msa0486920:intron | 45.0% | |
| AAAGGATGGTTACCGAACAC+GGG | + | chr3_4:5022776-5022795 | Msa0486920:intron | 45.0% | |
| ! | TCTTTGAAGATGCAGGGAAC+TGG | + | chr3_4:5022886-5022905 | Msa0486920:intron | 45.0% |
| GGAAAATTTCCCGACAACAG+TGG | + | chr3_4:5022966-5022985 | Msa0486920:intron | 45.0% | |
| GCCCAGTTATGCAGTGATTT+AGG | + | chr3_4:5023330-5023349 | Msa0486920:CDS | 45.0% | |
| CGTCTCTTGAGGTTATAGCT+TGG | - | chr3_4:5023498-5023517 | None:intergenic | 45.0% | |
| TTTGTTGGTACCGTCTCTTG+AGG | - | chr3_4:5023509-5023528 | None:intergenic | 45.0% | |
| GGGATTTCCTTCTAACCTGA+AGG | + | chr3_4:5023557-5023576 | Msa0486920:CDS | 45.0% | |
| ! | TCACTTGCCTTCAGGTTAGA+AGG | - | chr3_4:5023567-5023586 | None:intergenic | 45.0% |
| ! | CCTTCCAAAAGTTTTCCCAG+CGG | - | chr3_4:5023759-5023778 | None:intergenic | 45.0% |
| !! | CTGGGAAAACTTTTGGAAGG+TGG | + | chr3_4:5023759-5023778 | Msa0486920:CDS | 45.0% |
| ! | TCTGTTTGCTGATCAGGCAA+AGG | + | chr3_4:5023845-5023864 | Msa0486920:CDS | 45.0% |
| CTTCGTTCGGGGTTTAGAAG+AGG | - | chr3_4:5016796-5016815 | None:intergenic | 50.0% | |
| TCATGCGTGTTCTTCGTTCG+GGG | - | chr3_4:5016807-5016826 | None:intergenic | 50.0% | |
| TGTGGCGGTTGAAGAGGTTA+GGG | - | chr3_4:5016881-5016900 | None:intergenic | 50.0% | |
| TTGTGGCGGTTGAAGAGGTT+AGG | - | chr3_4:5016882-5016901 | None:intergenic | 50.0% | |
| TGATTCACATTGCGGTGGTG+TGG | - | chr3_4:5016908-5016927 | None:intergenic | 50.0% | |
| !! | AACGCTGATTCACATTGCGG+TGG | - | chr3_4:5016913-5016932 | None:intergenic | 50.0% |
| TTGTAACTCCGGTCATCTCG+AGG | - | chr3_4:5017026-5017045 | None:intergenic | 50.0% | |
| CCAGGGAGAACTTGTAACTC+CGG | - | chr3_4:5017037-5017056 | None:intergenic | 50.0% | |
| GAACATCGGAGCGATCAAAC+TGG | - | chr3_4:5017071-5017090 | None:intergenic | 50.0% | |
| CTCCGATGTTCGGTATCTCA+AGG | + | chr3_4:5017080-5017099 | Msa0486920:CDS | 50.0% | |
| AGGTTCGCCGTTGTTCAGTT+CGG | + | chr3_4:5017120-5017139 | Msa0486920:CDS | 50.0% | |
| TTCGTCTAACCAGTCCTTCG+TGG | + | chr3_4:5017164-5017183 | Msa0486920:CDS | 50.0% | |
| GTGTTACGGATATGCCACGA+AGG | - | chr3_4:5017181-5017200 | None:intergenic | 50.0% | |
| AGAGAGAGGATGTTGGAAGG+AGG | + | chr3_4:5018053-5018072 | Msa0486920:intron | 50.0% | |
| TTTCCACGTCAGGAGCTTTC+TGG | + | chr3_4:5018336-5018355 | Msa0486920:CDS | 50.0% | |
| AAACCAGAAAGCTCCTGACG+TGG | - | chr3_4:5018342-5018361 | None:intergenic | 50.0% | |
| !!! | CGTCAGGAGCTTTCTGGTTT+TGG | + | chr3_4:5018342-5018361 | Msa0486920:CDS | 50.0% |
| TCTCTGCCAGACTACTTCGA+TGG | + | chr3_4:5018380-5018399 | Msa0486920:CDS | 50.0% | |
| CATCCAGCTCTCAAGCTTGA+TGG | + | chr3_4:5019110-5019129 | Msa0486920:CDS | 50.0% | |
| !!! | TTTTCTGGAGTCTCGGGAAG+AGG | - | chr3_4:5020016-5020035 | None:intergenic | 50.0% |
| TTGGAGCCAGCAGCAATTTG+TGG | - | chr3_4:5020172-5020191 | None:intergenic | 50.0% | |
| ACACGGAGACGACAAATCAG+AGG | + | chr3_4:5020831-5020850 | Msa0486920:intron | 50.0% | |
| ! | TACCTTCGTCTTCGTCGACT+TGG | - | chr3_4:5020876-5020895 | None:intergenic | 50.0% |
| ! | AAGGTGAGTTGAGGTCGACA+GGG | + | chr3_4:5020930-5020949 | Msa0486920:intron | 50.0% |
| !! | AGTTGATGGAGGAAGGCGAT+AGG | + | chr3_4:5020968-5020987 | Msa0486920:intron | 50.0% |
| ! | GTTGATGGAGGAAGGCGATA+GGG | + | chr3_4:5020969-5020988 | Msa0486920:intron | 50.0% |
| GATAGGGAGGGAAAGTCACA+GGG | + | chr3_4:5020985-5021004 | Msa0486920:intron | 50.0% | |
| GCAAAGATGTTCACTGCGAC+AGG | - | chr3_4:5021143-5021162 | None:intergenic | 50.0% | |
| GTCGCAGTGAACATCTTTGC+TGG | + | chr3_4:5021143-5021162 | Msa0486920:intron | 50.0% | |
| ! | GACTGGTTAGGATCTGGTGT+TGG | - | chr3_4:5021680-5021699 | None:intergenic | 50.0% |
| ! | CTCGTGAGTCATGACTGGTT+AGG | - | chr3_4:5021692-5021711 | None:intergenic | 50.0% |
| AGAGTCACCAGGAGCCAATT+TGG | + | chr3_4:5021723-5021742 | Msa0486920:intron | 50.0% | |
| TTGGCTACTGTAGTGTGCTC+AGG | + | chr3_4:5021869-5021888 | Msa0486920:intron | 50.0% | |
| !! | TGGGCTTCCAGTTTTTAGGG+GGG | - | chr3_4:5022462-5022481 | None:intergenic | 50.0% |
| TGGAAGCCCATTCGACACAA+TGG | + | chr3_4:5022472-5022491 | Msa0486920:intron | 50.0% | |
| ! | CACGGCTTGCTTCAAAATGG+AGG | + | chr3_4:5022603-5022622 | Msa0486920:intron | 50.0% |
| ! | CGGCTTGCTTCAAAATGGAG+GGG | + | chr3_4:5022605-5022624 | Msa0486920:intron | 50.0% |
| ! | GGCTTGCTTCAAAATGGAGG+GGG | + | chr3_4:5022606-5022625 | Msa0486920:intron | 50.0% |
| ! | GTTCACATGGCGGGGATATA+TGG | - | chr3_4:5022641-5022660 | None:intergenic | 50.0% |
| ! | CTTCTTAACTTGAGGGAGGG+GGG | + | chr3_4:5022660-5022679 | Msa0486920:intron | 50.0% |
| AGGGGGATGATGTGCATATG+CGG | + | chr3_4:5022745-5022764 | Msa0486920:intron | 50.0% | |
| GCATATGCGGCGTTTGTGAA+AGG | + | chr3_4:5022758-5022777 | Msa0486920:intron | 50.0% | |
| ATGCGGCGTTTGTGAAAGGA+TGG | + | chr3_4:5022762-5022781 | Msa0486920:intron | 50.0% | |
| GTGAAGTAGACCGTGGAAGA+GGG | + | chr3_4:5022798-5022817 | Msa0486920:intron | 50.0% | |
| TGAAGTAGACCGTGGAAGAG+GGG | + | chr3_4:5022799-5022818 | Msa0486920:intron | 50.0% | |
| AAGAGGGGTCATGGGAAGAT+GGG | + | chr3_4:5022814-5022833 | Msa0486920:intron | 50.0% | |
| !! | GTCATGGGAAGATGGGTTGA+TGG | + | chr3_4:5022821-5022840 | Msa0486920:intron | 50.0% |
| !! | ATGGGAAGATGGGTTGATGG+AGG | + | chr3_4:5022824-5022843 | Msa0486920:intron | 50.0% |
| ! | GAGGTACCATGGTGGTGAAA+TGG | + | chr3_4:5022850-5022869 | Msa0486920:intron | 50.0% |
| ACGCTACCATTTCACCACCA+TGG | - | chr3_4:5022859-5022878 | None:intergenic | 50.0% | |
| ! | TGGTTTTCTCCCCCATCAGT+GGG | - | chr3_4:5022933-5022952 | None:intergenic | 50.0% |
| GAGAAAACCACCACAAGGGA+GGG | + | chr3_4:5022943-5022962 | Msa0486920:intron | 50.0% | |
| AGAAAACCACCACAAGGGAG+GGG | + | chr3_4:5022944-5022963 | Msa0486920:intron | 50.0% | |
| ! | GAAATTTTCCCCCTCCCTTG+TGG | - | chr3_4:5022956-5022975 | None:intergenic | 50.0% |
| GAATTTGCAGATCGTCCAGC+TGG | + | chr3_4:5023250-5023269 | Msa0486920:intron | 50.0% | |
| CTCGTACTTCACTTGCCTTC+AGG | - | chr3_4:5023575-5023594 | None:intergenic | 50.0% | |
| ACACTGCTGTTGCATCCAAG+TGG | - | chr3_4:5023644-5023663 | None:intergenic | 50.0% | |
| AGCGGATGCAAAACCGAGAT+TGG | - | chr3_4:5023741-5023760 | None:intergenic | 50.0% | |
| ! | AATCTCGGTTTTGCATCCGC+TGG | + | chr3_4:5023740-5023759 | Msa0486920:CDS | 50.0% |
| ! | ATCTCGGTTTTGCATCCGCT+GGG | + | chr3_4:5023741-5023760 | Msa0486920:CDS | 50.0% |
| ! | GCATCCGCTGGGAAAACTTT+TGG | + | chr3_4:5023752-5023771 | Msa0486920:CDS | 50.0% |
| ! | CCGCTGGGAAAACTTTTGGA+AGG | + | chr3_4:5023756-5023775 | Msa0486920:CDS | 50.0% |
| CAAAGGCAGTTGGCATGAAG+TGG | + | chr3_4:5023862-5023881 | Msa0486920:CDS | 50.0% | |
| GGTTGTTGTGGCGGTTGAAG+AGG | - | chr3_4:5016887-5016906 | None:intergenic | 55.0% | |
| TTGCGGTGGTGTGGTTGTTG+TGG | - | chr3_4:5016899-5016918 | None:intergenic | 55.0% | |
| AATCGTCGTTAGCGGAGCTC+CGG | + | chr3_4:5016965-5016984 | Msa0486920:CDS | 55.0% | |
| CCGGAGTTACAAGTTCTCCC+TGG | + | chr3_4:5017034-5017053 | Msa0486920:CDS | 55.0% | |
| AGGTTAGAGACTCCGCCAGT+AGG | + | chr3_4:5017100-5017119 | Msa0486920:CDS | 55.0% | |
| AACAACGGCGAACCTACTGG+CGG | - | chr3_4:5017115-5017134 | None:intergenic | 55.0% | |
| CTGAACAACGGCGAACCTAC+TGG | - | chr3_4:5017118-5017137 | None:intergenic | 55.0% | |
| TCGGCGTTTGTCCTTTCCGA+TGG | + | chr3_4:5017139-5017158 | Msa0486920:CDS | 55.0% | |
| CGGCGTTTGTCCTTTCCGAT+GGG | + | chr3_4:5017140-5017159 | Msa0486920:CDS | 55.0% | |
| ACGGATATGCCACGAAGGAC+TGG | - | chr3_4:5017176-5017195 | None:intergenic | 55.0% | |
| GCTGTAAAAGGTCCTGGCCA+TGG | + | chr3_4:5018548-5018567 | Msa0486920:intron | 55.0% | |
| AAGGTCCTGGCCATGGTAAC+TGG | + | chr3_4:5018555-5018574 | Msa0486920:intron | 55.0% | |
| CTAGTCCAGTTACCATGGCC+AGG | - | chr3_4:5018563-5018582 | None:intergenic | 55.0% | |
| ! | CCAGGCTAGTCCAGTTACCA+TGG | - | chr3_4:5018568-5018587 | None:intergenic | 55.0% |
| !! | CCATGGTAACTGGACTAGCC+TGG | + | chr3_4:5018565-5018584 | Msa0486920:intron | 55.0% |
| GGCGAAATCCAACTGCAGCT+TGG | - | chr3_4:5019819-5019838 | None:intergenic | 55.0% | |
| GACCAAGTCGACGAAGACGA+AGG | + | chr3_4:5020871-5020890 | Msa0486920:intron | 55.0% | |
| ! | GAAGGTGAGTTGAGGTCGAC+AGG | + | chr3_4:5020929-5020948 | Msa0486920:intron | 55.0% |
| ATGGAGGAAGGCGATAGGGA+GGG | + | chr3_4:5020973-5020992 | Msa0486920:intron | 55.0% | |
| CGATAGGGAGGGAAAGTCAC+AGG | + | chr3_4:5020984-5021003 | Msa0486920:intron | 55.0% | |
| GCAAACGAAGATGGCAAGGG+AGG | - | chr3_4:5021199-5021218 | None:intergenic | 55.0% | |
| ! | AGTCGTGCCAAATTGGCTCC+TGG | - | chr3_4:5021733-5021752 | None:intergenic | 55.0% |
| TGGTGTGGACAGGACCACTT+TGG | - | chr3_4:5022379-5022398 | None:intergenic | 55.0% | |
| ! | CAACGGTTGACGGGCAAACA+CGG | + | chr3_4:5022585-5022604 | Msa0486920:intron | 55.0% |
| ! | TTAACTTGAGGGAGGGGGGT+AGG | + | chr3_4:5022664-5022683 | Msa0486920:intron | 55.0% |
| TAACTTGAGGGAGGGGGGTA+GGG | + | chr3_4:5022665-5022684 | Msa0486920:intron | 55.0% | |
| CTGTCAAGCTGGAGACCTAG+CGG | + | chr3_4:5022705-5022724 | Msa0486920:intron | 55.0% | |
| ! | AAGCTGGAGACCTAGCGGAT+GGG | + | chr3_4:5022710-5022729 | Msa0486920:intron | 55.0% |
| CGGTCTACTTCACCCGTGTT+CGG | - | chr3_4:5022791-5022810 | None:intergenic | 55.0% | |
| AACACGGGTGAAGTAGACCG+TGG | + | chr3_4:5022791-5022810 | Msa0486920:intron | 55.0% | |
| GGTGAAGTAGACCGTGGAAG+AGG | + | chr3_4:5022797-5022816 | Msa0486920:intron | 55.0% | |
| TTCCCATGACCCCTCTTCCA+CGG | - | chr3_4:5022811-5022830 | None:intergenic | 55.0% | |
| GAAGAGGGGTCATGGGAAGA+TGG | + | chr3_4:5022813-5022832 | Msa0486920:intron | 55.0% | |
| !! | GATGGGTTGATGGAGGAGTG+AGG | + | chr3_4:5022831-5022850 | Msa0486920:intron | 55.0% |
| ! | GATGGAGGAGTGAGGTACCA+TGG | + | chr3_4:5022839-5022858 | Msa0486920:intron | 55.0% |
| GAAGATGCAGGGAACTGGAG+AGG | + | chr3_4:5022891-5022910 | Msa0486920:intron | 55.0% | |
| ! | GTGGTTTTCTCCCCCATCAG+TGG | - | chr3_4:5022934-5022953 | None:intergenic | 55.0% |
| TGGGGGAGAAAACCACCACA+AGG | + | chr3_4:5022938-5022957 | Msa0486920:intron | 55.0% | |
| GGGGGAGAAAACCACCACAA+GGG | + | chr3_4:5022939-5022958 | Msa0486920:intron | 55.0% | |
| GGAGAAAACCACCACAAGGG+AGG | + | chr3_4:5022942-5022961 | Msa0486920:intron | 55.0% | |
| GAAAACCACCACAAGGGAGG+GGG | + | chr3_4:5022945-5022964 | Msa0486920:intron | 55.0% | |
| ! | ATTTTCCCCCTCCCTTGTGG+TGG | - | chr3_4:5022953-5022972 | None:intergenic | 55.0% |
| AGATCGTCCAGCTGGAATCC+TGG | + | chr3_4:5023258-5023277 | Msa0486920:intron | 55.0% | |
| GAATCCTGGAGGCAAGCATG+AGG | + | chr3_4:5023272-5023291 | Msa0486920:CDS | 55.0% | |
| GCTGATCAGGCAAAGGCAGT+TGG | + | chr3_4:5023852-5023871 | Msa0486920:CDS | 55.0% | |
| CGGTGGTGTGGTTGTTGTGG+CGG | - | chr3_4:5016896-5016915 | None:intergenic | 60.0% | |
| ! | GCAACGGTGACGGTCTTCGA+TGG | - | chr3_4:5016937-5016956 | None:intergenic | 60.0% |
| CGAAGTCCGACGATCGGACA+TGG | - | chr3_4:5016993-5017012 | None:intergenic | 60.0% | |
| TGGCGACGAAGTCCGACGAT+CGG | - | chr3_4:5016999-5017018 | None:intergenic | 60.0% | |
| GCCATCGACCTCGAGATGAC+CGG | + | chr3_4:5017015-5017034 | Msa0486920:CDS | 60.0% | |
| TCCGGTCATCTCGAGGTCGA+TGG | - | chr3_4:5017019-5017038 | None:intergenic | 60.0% | |
| CGGCGATGGAAGGTGAGTTG+AGG | + | chr3_4:5020921-5020940 | Msa0486920:intron | 60.0% | |
| GAGTTGAGGTCGACAGGGCA+TGG | + | chr3_4:5020935-5020954 | Msa0486920:intron | 60.0% | |
| GATGGAGGAAGGCGATAGGG+AGG | + | chr3_4:5020972-5020991 | Msa0486920:intron | 60.0% | |
| AACTTGAGGGAGGGGGGTAG+GGG | + | chr3_4:5022666-5022685 | Msa0486920:intron | 60.0% | |
| GCTTGACAGAGCTCCCCAAC+CGG | - | chr3_4:5022694-5022713 | None:intergenic | 60.0% | |
| GTTGGGGAGCTCTGTCAAGC+TGG | + | chr3_4:5022694-5022713 | Msa0486920:intron | 60.0% | |
| CAAGCTGGAGACCTAGCGGA+TGG | + | chr3_4:5022709-5022728 | Msa0486920:intron | 60.0% | |
| CAATCTCGCTCCCATCCGCT+AGG | - | chr3_4:5022723-5022742 | None:intergenic | 60.0% | |
| GGATGGGAGCGAGATTGCGA+GGG | + | chr3_4:5022726-5022745 | Msa0486920:intron | 60.0% | |
| GATGGGAGCGAGATTGCGAG+GGG | + | chr3_4:5022727-5022746 | Msa0486920:intron | 60.0% | |
| ATGGGAGCGAGATTGCGAGG+GGG | + | chr3_4:5022728-5022747 | Msa0486920:intron | 60.0% | |
| AGACCGTGGAAGAGGGGTCA+TGG | + | chr3_4:5022805-5022824 | Msa0486920:intron | 60.0% | |
| GACCGTGGAAGAGGGGTCAT+GGG | + | chr3_4:5022806-5022825 | Msa0486920:intron | 60.0% | |
| ! | GGAGGAGTGAGGTACCATGG+TGG | + | chr3_4:5022842-5022861 | Msa0486920:intron | 60.0% |
| TCGTCCAGCTGGAATCCTGG+AGG | + | chr3_4:5023261-5023280 | Msa0486920:CDS | 60.0% | |
| CTTGCCTCCAGGATTCCAGC+TGG | - | chr3_4:5023268-5023287 | None:intergenic | 60.0% | |
| TTCTGCGCCACAGGAATGGG+CGG | - | chr3_4:5024044-5024063 | None:intergenic | 60.0% | |
| GGCTTCTGCGCCACAGGAAT+GGG | - | chr3_4:5024047-5024066 | None:intergenic | 60.0% | |
| TGGCTTCTGCGCCACAGGAA+TGG | - | chr3_4:5024048-5024067 | None:intergenic | 60.0% | |
| ! | CAAGTTGGCTTCTGCGCCAC+AGG | - | chr3_4:5024053-5024072 | None:intergenic | 60.0% |
| CCGACGATCGGACATGGTGC+CGG | - | chr3_4:5016987-5017006 | None:intergenic | 65.0% | |
| CCGGCACCATGTCCGATCGT+CGG | + | chr3_4:5016984-5017003 | Msa0486920:CDS | 65.0% | |
| CGGATGGGAGCGAGATTGCG+AGG | + | chr3_4:5022725-5022744 | Msa0486920:intron | 65.0% | |
| ATCAGTGGGAGCGAGGCTGC+TGG | - | chr3_4:5022919-5022938 | None:intergenic | 65.0% | |
| AGCAGCCTCGCTCCCACTGA+TGG | + | chr3_4:5022918-5022937 | Msa0486920:intron | 65.0% | |
| GCAGCCTCGCTCCCACTGAT+GGG | + | chr3_4:5022919-5022938 | Msa0486920:intron | 65.0% | |
| CAGCCTCGCTCCCACTGATG+GGG | + | chr3_4:5022920-5022939 | Msa0486920:intron | 65.0% | |
| AGCCTCGCTCCCACTGATGG+GGG | + | chr3_4:5022921-5022940 | Msa0486920:intron | 65.0% | |
| CCTGCCTCATGCTTGCCTCC+AGG | - | chr3_4:5023279-5023298 | None:intergenic | 65.0% | |
| CCTGGAGGCAAGCATGAGGC+AGG | + | chr3_4:5023276-5023295 | Msa0486920:CDS | 65.0% | |
| AGGCAAGCCGCCCATTCCTG+TGG | + | chr3_4:5024034-5024053 | Msa0486920:three_prime_UTR | 65.0% | |
| CTCCCCCATCAGTGGGAGCG+AGG | - | chr3_4:5022926-5022945 | None:intergenic | 70.0% | |
| AGGGAGGGGGGTAGGGGCTC+CGG | + | chr3_4:5022672-5022691 | Msa0486920:intron | 75.0% | |
| AGGGGGGTAGGGGCTCCGGT+TGG | + | chr3_4:5022676-5022695 | Msa0486920:intron | 75.0% | |
| GGGGGGTAGGGGCTCCGGTT+GGG | + | chr3_4:5022677-5022696 | Msa0486920:intron | 75.0% | |
| GGGGGTAGGGGCTCCGGTTG+GGG | + | chr3_4:5022678-5022697 | Msa0486920:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 5016770 | 5024246 | 5016770 | ID=Msa0486920;Name=Msa0486920 |
| chr3_4 | mRNA | 5016770 | 5024246 | 5016770 | ID=Msa0486920-mRNA-1;Parent=Msa0486920;Name=Msa0486920-mRNA-1;_AED=0.02;_eAED=0.02;_QI=53|1|1|1|0.66|0.71|7|263|687 |
| chr3_4 | exon | 5016770 | 5017193 | 5016770 | ID=Msa0486920-mRNA-1:exon:1938;Parent=Msa0486920-mRNA-1 |
| chr3_4 | exon | 5018320 | 5018450 | 5018320 | ID=Msa0486920-mRNA-1:exon:1939;Parent=Msa0486920-mRNA-1 |
| chr3_4 | exon | 5018841 | 5019166 | 5018841 | ID=Msa0486920-mRNA-1:exon:1940;Parent=Msa0486920-mRNA-1 |
| chr3_4 | exon | 5019345 | 5019458 | 5019345 | ID=Msa0486920-mRNA-1:exon:1941;Parent=Msa0486920-mRNA-1 |
| chr3_4 | exon | 5019772 | 5019898 | 5019772 | ID=Msa0486920-mRNA-1:exon:1942;Parent=Msa0486920-mRNA-1 |
| chr3_4 | exon | 5019981 | 5020251 | 5019981 | ID=Msa0486920-mRNA-1:exon:1943;Parent=Msa0486920-mRNA-1 |
| chr3_4 | exon | 5023260 | 5024246 | 5023260 | ID=Msa0486920-mRNA-1:exon:1944;Parent=Msa0486920-mRNA-1 |
| chr3_4 | five_prime_UTR | 5016770 | 5016822 | 5016770 | ID=Msa0486920-mRNA-1:five_prime_utr;Parent=Msa0486920-mRNA-1 |
| chr3_4 | CDS | 5016823 | 5017193 | 5016823 | ID=Msa0486920-mRNA-1:cds;Parent=Msa0486920-mRNA-1 |
| chr3_4 | CDS | 5018320 | 5018450 | 5018320 | ID=Msa0486920-mRNA-1:cds;Parent=Msa0486920-mRNA-1 |
| chr3_4 | CDS | 5018841 | 5019166 | 5018841 | ID=Msa0486920-mRNA-1:cds;Parent=Msa0486920-mRNA-1 |
| chr3_4 | CDS | 5019345 | 5019458 | 5019345 | ID=Msa0486920-mRNA-1:cds;Parent=Msa0486920-mRNA-1 |
| chr3_4 | CDS | 5019772 | 5019898 | 5019772 | ID=Msa0486920-mRNA-1:cds;Parent=Msa0486920-mRNA-1 |
| chr3_4 | CDS | 5019981 | 5020251 | 5019981 | ID=Msa0486920-mRNA-1:cds;Parent=Msa0486920-mRNA-1 |
| chr3_4 | CDS | 5023260 | 5023983 | 5023260 | ID=Msa0486920-mRNA-1:cds;Parent=Msa0486920-mRNA-1 |
| chr3_4 | three_prime_UTR | 5023984 | 5024246 | 5023984 | ID=Msa0486920-mRNA-1:three_prime_utr;Parent=Msa0486920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
