Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034030 | sp|Q9FZ24|PPR4_ARATH | 43.160 | 519 | 245 | 6 | 1 | 469 | 1 | 519 | 2.21e-144 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011960 | Msa0034030 | 0.854762 | 9.916691e-62 | -8.615850e-47 |
| Msa0021220 | Msa0034030 | 0.844620 | 6.754813e-59 | -8.615850e-47 |
| Msa0027770 | Msa0034030 | 0.847605 | 1.040176e-59 | -8.615850e-47 |
| Msa0030200 | Msa0034030 | 0.823068 | 1.690187e-53 | -8.615850e-47 |
| Msa0033950 | Msa0034030 | 0.992364 | 7.584718e-193 | -8.615850e-47 |
| Msa0034030 | Msa0037770 | 0.803958 | 2.718597e-49 | -8.615850e-47 |
| Msa0034030 | Msa0043660 | 0.851231 | 1.015737e-60 | -8.615850e-47 |
| Msa0034030 | Msa0048550 | 0.838737 | 2.407309e-57 | -8.615850e-47 |
| Msa0034030 | Msa0054440 | 0.854427 | 1.239643e-61 | -8.615850e-47 |
| Msa0034030 | Msa0054480 | 0.842755 | 2.129716e-58 | -8.615850e-47 |
| Msa0034030 | Msa0059110 | 0.801995 | 6.919589e-49 | -8.615850e-47 |
| Msa0034030 | Msa0061080 | 0.821818 | 3.298166e-53 | -8.615850e-47 |
| Msa0034030 | Msa0061630 | 0.802232 | 6.186779e-49 | -8.615850e-47 |
| Msa0034030 | Msa0063530 | 0.843775 | 1.138932e-58 | -8.615850e-47 |
| Msa0034030 | Msa0067630 | 0.813659 | 2.288244e-51 | -8.615850e-47 |
| Msa0034030 | Msa0070700 | 0.852878 | 3.456507e-61 | -8.615850e-47 |
| Msa0034030 | Msa0075500 | 0.848254 | 6.889669e-60 | -8.615850e-47 |
| Msa0034030 | Msa0091560 | 0.814996 | 1.158873e-51 | -8.615850e-47 |
| Msa0034030 | Msa0105620 | 0.848462 | 6.035402e-60 | -8.615850e-47 |
| Msa0034030 | Msa0115130 | 0.844377 | 7.852984e-59 | -8.615850e-47 |
| Msa0034030 | Msa0115400 | 0.859817 | 3.181767e-63 | -8.615850e-47 |
| Msa0034030 | Msa0118590 | 0.851808 | 6.971577e-61 | -8.615850e-47 |
| Msa0034030 | Msa0123360 | 0.835449 | 1.667036e-56 | -8.615850e-47 |
| Msa0034030 | Msa0127020 | 0.867093 | 1.764095e-65 | -8.615850e-47 |
| Msa0034030 | Msa0128050 | 0.936115 | 2.905333e-97 | -8.615850e-47 |
| Msa0034030 | Msa0137550 | 0.861008 | 1.386557e-63 | -8.615850e-47 |
| Msa0034030 | Msa0139350 | 0.870516 | 1.375478e-66 | -8.615850e-47 |
| Msa0034030 | Msa0141660 | 0.841423 | 4.794048e-58 | -8.615850e-47 |
| Msa0034030 | Msa0144370 | 0.859635 | 3.608827e-63 | -8.615850e-47 |
| Msa0034030 | Msa0146770 | 0.824525 | 7.699083e-54 | -8.615850e-47 |
| Msa0034030 | Msa0150820 | 0.819505 | 1.121209e-52 | -8.615850e-47 |
| Msa0034030 | Msa0159170 | 0.856575 | 2.932129e-62 | -8.615850e-47 |
| Msa0034030 | Msa0160550 | 0.809830 | 1.558780e-50 | -8.615850e-47 |
| Msa0034030 | Msa0168230 | 0.867918 | 9.602781e-66 | -8.615850e-47 |
| Msa0034030 | Msa0169280 | 0.864979 | 8.231814e-65 | -8.615850e-47 |
| Msa0034030 | Msa0170200 | 0.816224 | 6.174691e-52 | -8.615850e-47 |
| Msa0034030 | Msa0179190 | 0.822754 | 2.000136e-53 | -8.615850e-47 |
| Msa0034030 | Msa0189300 | 0.820826 | 5.586265e-53 | -8.615850e-47 |
| Msa0034030 | Msa0220720 | 0.806511 | 7.940617e-50 | -8.615850e-47 |
| Msa0034030 | Msa0231660 | 0.812236 | 4.692496e-51 | -8.615850e-47 |
| Msa0034030 | Msa0241470 | 0.819842 | 9.392216e-53 | -8.615850e-47 |
| Msa0034030 | Msa0279220 | 0.835798 | 1.360509e-56 | -8.615850e-47 |
| Msa0034030 | Msa0279240 | 0.853536 | 2.240134e-61 | -8.615850e-47 |
| Msa0034030 | Msa0309750 | 0.844125 | 9.177545e-59 | -8.615850e-47 |
| Msa0034030 | Msa0318980 | 0.836158 | 1.102267e-56 | -8.615850e-47 |
| Msa0034030 | Msa0325590 | 0.842106 | 3.165384e-58 | -8.615850e-47 |
| Msa0034030 | Msa0345350 | 0.837303 | 5.628763e-57 | -8.615850e-47 |
| Msa0034030 | Msa0345390 | 0.834739 | 2.517655e-56 | -8.615850e-47 |
| Msa0034030 | Msa0351990 | 0.819529 | 1.107056e-52 | -8.615850e-47 |
| Msa0034030 | Msa0383800 | 0.803254 | 3.804945e-49 | -8.615850e-47 |
| Msa0034030 | Msa0388700 | 0.872528 | 2.966762e-67 | -8.615850e-47 |
| Msa0034030 | Msa0393940 | 0.831910 | 1.276724e-55 | -8.615850e-47 |
| Msa0034030 | Msa0397070 | 0.803607 | 3.216273e-49 | -8.615850e-47 |
| Msa0034030 | Msa0397540 | 0.848185 | 7.198870e-60 | -8.615850e-47 |
| Msa0034030 | Msa0398810 | 0.828545 | 8.469006e-55 | -8.615850e-47 |
| Msa0034030 | Msa0409090 | 0.823885 | 1.088381e-53 | -8.615850e-47 |
| Msa0034030 | Msa0411430 | 0.809209 | 2.118536e-50 | -8.615850e-47 |
| Msa0034030 | Msa0422840 | 0.822826 | 1.924600e-53 | -8.615850e-47 |
| Msa0034030 | Msa0422920 | 0.825781 | 3.886825e-54 | -8.615850e-47 |
| Msa0034030 | Msa0428060 | 0.815471 | 9.088907e-52 | -8.615850e-47 |
| Msa0034030 | Msa0434180 | 0.803876 | 2.828087e-49 | -8.615850e-47 |
| Msa0034030 | Msa0437360 | 0.907183 | 6.670561e-81 | -8.615850e-47 |
| Msa0034030 | Msa0446050 | 0.806691 | 7.273713e-50 | -8.615850e-47 |
| Msa0034030 | Msa0449210 | 0.815576 | 8.614624e-52 | -8.615850e-47 |
| Msa0034030 | Msa0474400 | 0.831523 | 1.590674e-55 | -8.615850e-47 |
| Msa0034030 | Msa0481030 | 0.816010 | 6.891769e-52 | -8.615850e-47 |
| Msa0034030 | Msa0481280 | 0.832051 | 1.178427e-55 | -8.615850e-47 |
| Msa0034030 | Msa0481530 | 0.815605 | 8.487581e-52 | -8.615850e-47 |
| Msa0034030 | Msa0482130 | 0.885335 | 8.882834e-72 | -8.615850e-47 |
| Msa0034030 | Msa0486920 | 0.800466 | 1.422472e-48 | -8.615850e-47 |
| Msa0034030 | Msa0489410 | 0.843730 | 1.170562e-58 | -8.615850e-47 |
| Msa0034030 | Msa0493410 | 0.839897 | 1.203354e-57 | -8.615850e-47 |
| Msa0034030 | Msa0500470 | 0.807387 | 5.181743e-50 | -8.615850e-47 |
| Msa0034030 | Msa0502090 | 0.821587 | 3.729199e-53 | -8.615850e-47 |
| Msa0034030 | Msa0522070 | 0.801707 | 7.929994e-49 | -8.615850e-47 |
| Msa0034030 | Msa0529890 | 0.818335 | 2.068736e-52 | -8.615850e-47 |
| Msa0034030 | Msa0542090 | 0.900991 | 4.204486e-78 | -8.615850e-47 |
| Msa0034030 | Msa0542130 | 0.900482 | 7.007371e-78 | -8.615850e-47 |
| Msa0034030 | Msa0554290 | 0.818830 | 1.597367e-52 | -8.615850e-47 |
| Msa0034030 | Msa0555450 | 0.809355 | 1.971464e-50 | -8.615850e-47 |
| Msa0034030 | Msa0566100 | 0.856110 | 4.013523e-62 | -8.615850e-47 |
| Msa0034030 | Msa0581280 | 0.824525 | 7.698994e-54 | -8.615850e-47 |
| Msa0034030 | Msa0585560 | 0.812648 | 3.814256e-51 | -8.615850e-47 |
| Msa0034030 | Msa0605000 | 0.871127 | 8.658304e-67 | -8.615850e-47 |
| Msa0034030 | Msa0610430 | 0.810341 | 1.209538e-50 | -8.615850e-47 |
| Msa0034030 | Msa0615490 | 0.800980 | 1.117294e-48 | -8.615850e-47 |
| Msa0034030 | Msa0617640 | 0.813743 | 2.193626e-51 | -8.615850e-47 |
| Msa0034030 | Msa0625720 | 0.818185 | 2.236861e-52 | -8.615850e-47 |
| Msa0034030 | Msa0643060 | 0.807541 | 4.806908e-50 | -8.615850e-47 |
| Msa0034030 | Msa0648780 | 0.831719 | 1.423623e-55 | -8.615850e-47 |
| Msa0034030 | Msa0660490 | 0.830325 | 3.128858e-55 | -8.615850e-47 |
| Msa0034030 | Msa0660850 | 0.814606 | 1.414483e-51 | -8.615850e-47 |
| Msa0034030 | Msa0663390 | 0.803447 | 3.471812e-49 | -8.615850e-47 |
| Msa0034030 | Msa0685140 | 0.889741 | 1.845717e-73 | -8.615850e-47 |
| Msa0034030 | Msa0689260 | 0.848770 | 4.959876e-60 | -8.615850e-47 |
| Msa0034030 | Msa0691290 | 0.826084 | 3.294085e-54 | -8.615850e-47 |
| Msa0034030 | Msa0692830 | 0.842124 | 3.132331e-58 | -8.615850e-47 |
| Msa0034030 | Msa0692950 | 0.822070 | 2.883725e-53 | -8.615850e-47 |
| Msa0034030 | Msa0698800 | 0.802323 | 5.925102e-49 | -8.615850e-47 |
| Msa0034030 | Msa0702370 | 0.842755 | 2.129716e-58 | -8.615850e-47 |
| Msa0034030 | Msa0702550 | 0.843504 | 1.345636e-58 | -8.615850e-47 |
| Msa0034030 | Msa0709040 | 0.845796 | 3.247604e-59 | -8.615850e-47 |
| Msa0034030 | Msa0711780 | 0.868601 | 5.783538e-66 | -8.615850e-47 |
| Msa0034030 | Msa0715650 | 0.841672 | 4.121789e-58 | -8.615850e-47 |
| Msa0034030 | Msa0715700 | 0.832934 | 7.118484e-56 | -8.615850e-47 |
| Msa0034030 | Msa0719420 | 0.812392 | 4.339319e-51 | -8.615850e-47 |
| Msa0034030 | Msa0719610 | 0.815729 | 7.964548e-52 | -8.615850e-47 |
| Msa0034030 | Msa0741230 | 0.800330 | 1.516190e-48 | -8.615850e-47 |
| Msa0034030 | Msa0745740 | 0.837761 | 4.293888e-57 | -8.615850e-47 |
| Msa0034030 | Msa0754380 | 0.839038 | 2.011985e-57 | -8.615850e-47 |
| Msa0034030 | Msa0755700 | 0.807802 | 4.231202e-50 | -8.615850e-47 |
| Msa0034030 | Msa0757940 | 0.811674 | 6.220525e-51 | -8.615850e-47 |
| Msa0034030 | Msa0763330 | 0.852863 | 3.491483e-61 | -8.615850e-47 |
| Msa0034030 | Msa0772480 | 0.856874 | 2.394502e-62 | -8.615850e-47 |
| Msa0034030 | Msa0789680 | 0.816204 | 6.238681e-52 | -8.615850e-47 |
| Msa0034030 | Msa0794670 | 0.859380 | 4.305911e-63 | -8.615850e-47 |
| Msa0034030 | Msa0795820 | 0.819154 | 1.347845e-52 | -8.615850e-47 |
| Msa0034030 | Msa0796210 | 0.827241 | 1.743691e-54 | -8.615850e-47 |
| Msa0034030 | Msa0798440 | 0.845126 | 4.933706e-59 | -8.615850e-47 |
| Msa0034030 | Msa0799260 | 0.829602 | 4.695843e-55 | -8.615850e-47 |
| Msa0034030 | Msa0799310 | 0.824330 | 8.558067e-54 | -8.615850e-47 |
| Msa0034030 | Msa0802410 | 0.822003 | 2.988657e-53 | -8.615850e-47 |
| Msa0034030 | Msa0816700 | 0.804731 | 1.876949e-49 | -8.615850e-47 |
| Msa0034030 | Msa0830040 | 0.824755 | 6.796342e-54 | -8.615850e-47 |
| Msa0034030 | Msa0830540 | 0.867378 | 1.430509e-65 | -8.615850e-47 |
| Msa0034030 | Msa0831530 | 0.812188 | 4.808082e-51 | -8.615850e-47 |
| Msa0034030 | Msa0862530 | 0.828729 | 7.646615e-55 | -8.615850e-47 |
| Msa0034030 | Msa0869130 | 0.807382 | 5.193477e-50 | -8.615850e-47 |
| Msa0034030 | Msa0887250 | 0.809441 | 1.889287e-50 | -8.615850e-47 |
| Msa0034030 | Msa0909110 | 0.814424 | 1.551433e-51 | -8.615850e-47 |
| Msa0034030 | Msa0909950 | 0.818119 | 2.314692e-52 | -8.615850e-47 |
| Msa0034030 | Msa0937150 | 0.815587 | 8.564690e-52 | -8.615850e-47 |
| Msa0034030 | Msa0945440 | 0.889522 | 2.246014e-73 | -8.615850e-47 |
| Msa0034030 | Msa0964060 | 0.806444 | 8.200163e-50 | -8.615850e-47 |
| Msa0034030 | Msa0969340 | 0.800014 | 1.758212e-48 | -8.615850e-47 |
| Msa0034030 | Msa0970530 | 0.812630 | 3.848292e-51 | -8.615850e-47 |
| Msa0034030 | Msa0987370 | 0.830445 | 2.925340e-55 | -8.615850e-47 |
| Msa0034030 | Msa0989540 | 0.823077 | 1.682201e-53 | -8.615850e-47 |
| Msa0034030 | Msa1009820 | 0.830579 | 2.713058e-55 | -8.615850e-47 |
| Msa0034030 | Msa1014730 | 0.813128 | 2.994025e-51 | -8.615850e-47 |
| Msa0034030 | Msa1051200 | 0.845075 | 5.090645e-59 | -8.615850e-47 |
| Msa0034030 | Msa1082250 | 0.816478 | 5.417954e-52 | -8.615850e-47 |
| Msa0034030 | Msa1083560 | 0.826535 | 2.571772e-54 | -8.615850e-47 |
| Msa0034030 | Msa1091940 | 0.823369 | 1.437353e-53 | -8.615850e-47 |
| Msa0034030 | Msa1097920 | 0.800828 | 1.200113e-48 | -8.615850e-47 |
| Msa0034030 | Msa1128570 | 0.867073 | 1.789646e-65 | -8.615850e-47 |
| Msa0034030 | Msa1137700 | 0.843795 | 1.124537e-58 | -8.615850e-47 |
| Msa0034030 | Msa1144040 | 0.830998 | 2.141339e-55 | -8.615850e-47 |
| Msa0034030 | Msa1153060 | 0.868537 | 6.068259e-66 | -8.615850e-47 |
| Msa0034030 | Msa1160590 | 0.881051 | 3.307699e-70 | -8.615850e-47 |
| Msa0034030 | Msa1174470 | 0.852526 | 4.356487e-61 | -8.615850e-47 |
| Msa0034030 | Msa1179070 | 0.805549 | 1.265146e-49 | -8.615850e-47 |
| Msa0034030 | Msa1181250 | 0.881623 | 2.058202e-70 | -8.615850e-47 |
| Msa0034030 | Msa1181330 | 0.881262 | 2.777104e-70 | -8.615850e-47 |
| Msa0034030 | Msa1208880 | 0.818883 | 1.553747e-52 | -8.615850e-47 |
| Msa0034030 | Msa1209200 | 0.826909 | 2.094182e-54 | -8.615850e-47 |
| Msa0034030 | Msa1209260 | 0.868438 | 6.527170e-66 | -8.615850e-47 |
| Msa0034030 | Msa1209760 | 0.856007 | 4.303048e-62 | -8.615850e-47 |
| Msa0034030 | Msa1217470 | 0.822997 | 1.755574e-53 | -8.615850e-47 |
| Msa0034030 | Msa1224810 | 0.850617 | 1.512869e-60 | -8.615850e-47 |
| Msa0034030 | Msa1237630 | 0.829827 | 4.140868e-55 | -8.615850e-47 |
| Msa0034030 | Msa1237700 | 0.818885 | 1.551538e-52 | -8.615850e-47 |
| Msa0034030 | Msa1245930 | 0.830725 | 2.498738e-55 | -8.615850e-47 |
| Msa0034030 | Msa1259060 | 0.834942 | 2.238102e-56 | -8.615850e-47 |
| Msa0034030 | Msa1266990 | 0.853700 | 2.008766e-61 | -8.615850e-47 |
| Msa0034030 | Msa1275980 | 0.804612 | 1.986555e-49 | -8.615850e-47 |
| Msa0034030 | Msa1294070 | 0.808269 | 3.365090e-50 | -8.615850e-47 |
| Msa0034030 | Msa1306920 | 0.814020 | 1.905676e-51 | -8.615850e-47 |
| Msa0034030 | Msa1332590 | 0.815644 | 8.318859e-52 | -8.615850e-47 |
| Msa0034030 | Msa1358250 | 0.850271 | 1.890919e-60 | -8.615850e-47 |
| Msa0034030 | Msa1384190 | 0.841279 | 5.231552e-58 | -8.615850e-47 |
| Msa0034030 | Msa1384880 | 0.816226 | 6.168848e-52 | -8.615850e-47 |
| Msa0034030 | Msa1392780 | 0.848022 | 7.986613e-60 | -8.615850e-47 |
| Msa0034030 | Msa1394290 | 0.813381 | 2.634853e-51 | -8.615850e-47 |
| Msa0034030 | Msa1400220 | 0.997501 | 1.132668e-243 | -8.615850e-47 |
| Msa0034030 | Msa1400580 | 0.831780 | 1.374539e-55 | -8.615850e-47 |
| Msa0034030 | Msa1403420 | 0.812950 | 3.275335e-51 | -8.615850e-47 |
| Msa0034030 | Msa1411750 | 0.859120 | 5.150845e-63 | -8.615850e-47 |
| Msa0034030 | Msa1419870 | 0.869917 | 2.160422e-66 | -8.615850e-47 |
| Msa0034030 | Msa1429120 | 0.816220 | 6.188560e-52 | -8.615850e-47 |
| Msa0034030 | Msa1436520 | 0.810510 | 1.112047e-50 | -8.615850e-47 |
| Msa0034030 | Msa1439550 | 0.825003 | 5.941226e-54 | -8.615850e-47 |
| Msa0034030 | Msa1457920 | 0.854632 | 1.081888e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034030 | MtrunA17_Chr1g0194521 | 97.292 | 480 | 13 | 0 | 1 | 480 | 60 | 539 | 0.0 | 972 |
| Msa0034030 | MtrunA17_Chr8g0368151 | 38.377 | 456 | 265 | 7 | 40 | 480 | 29 | 483 | 1.66e-93 | 292 |
| Msa0034030 | MtrunA17_Chr2g0282091 | 30.176 | 454 | 303 | 8 | 29 | 471 | 26 | 476 | 1.77e-62 | 211 |
| Msa0034030 | MtrunA17_Chr8g0359961 | 28.846 | 416 | 293 | 3 | 30 | 442 | 32 | 447 | 6.17e-61 | 207 |
| Msa0034030 | MtrunA17_Chr1g0185601 | 30.839 | 441 | 289 | 9 | 20 | 450 | 25 | 459 | 2.07e-56 | 195 |
| Msa0034030 | MtrunA17_Chr2g0303221 | 30.189 | 424 | 280 | 8 | 13 | 430 | 19 | 432 | 3.18e-56 | 194 |
| Msa0034030 | MtrunA17_Chr4g0021331 | 30.425 | 424 | 281 | 6 | 14 | 431 | 16 | 431 | 2.40e-55 | 192 |
| Msa0034030 | MtrunA17_Chr3g0132571 | 29.252 | 441 | 295 | 8 | 20 | 450 | 26 | 459 | 7.11e-51 | 180 |
| Msa0034030 | MtrunA17_Chr2g0324251 | 27.381 | 420 | 255 | 9 | 51 | 441 | 52 | 450 | 5.56e-42 | 155 |
| Msa0034030 | MtrunA17_Chr1g0155351 | 30.241 | 291 | 199 | 4 | 46 | 332 | 69 | 359 | 1.62e-41 | 152 |
| Msa0034030 | MtrunA17_Chr8g0335951 | 32.018 | 228 | 153 | 2 | 235 | 460 | 199 | 426 | 3.12e-30 | 122 |
| Msa0034030 | MtrunA17_Chr8g0335951 | 28.082 | 292 | 170 | 8 | 9 | 264 | 46 | 333 | 3.64e-19 | 89.7 |
| Msa0034030 | MtrunA17_Chr8g0349421 | 32.653 | 196 | 131 | 1 | 251 | 445 | 3 | 198 | 1.40e-26 | 107 |
| Msa0034030 | MtrunA17_Chr7g0256181 | 23.810 | 399 | 286 | 12 | 38 | 430 | 163 | 549 | 1.68e-24 | 107 |
| Msa0034030 | MtrunA17_Chr1g0171501 | 22.931 | 423 | 306 | 12 | 29 | 445 | 139 | 547 | 2.39e-22 | 100 |
| Msa0034030 | MtrunA17_Chr2g0328121 | 23.197 | 319 | 241 | 4 | 17 | 333 | 30 | 346 | 6.32e-18 | 86.3 |
| Msa0034030 | MtrunA17_Chr8g0349431 | 40.870 | 115 | 65 | 2 | 45 | 157 | 8 | 121 | 1.43e-16 | 76.3 |
| Msa0034030 | MtrunA17_Chr8g0387281 | 22.884 | 319 | 234 | 7 | 82 | 392 | 334 | 648 | 1.71e-12 | 69.7 |
| Msa0034030 | MtrunA17_Chr7g0220481 | 29.213 | 178 | 122 | 3 | 130 | 304 | 283 | 459 | 1.20e-11 | 67.4 |
| Msa0034030 | MtrunA17_Chr8g0377751 | 22.812 | 320 | 223 | 8 | 53 | 359 | 722 | 1030 | 7.40e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034030 | AT1G02370.1 | 43.160 | 519 | 245 | 6 | 1 | 469 | 1 | 519 | 2.25e-145 | 427 |
| Msa0034030 | AT4G01990.1 | 43.542 | 480 | 249 | 8 | 11 | 469 | 6 | 484 | 2.50e-128 | 382 |
| Msa0034030 | AT1G60770.1 | 37.069 | 464 | 271 | 10 | 33 | 480 | 25 | 483 | 1.13e-89 | 282 |
| Msa0034030 | AT1G02150.1 | 34.259 | 432 | 279 | 4 | 33 | 459 | 69 | 500 | 1.33e-76 | 249 |
| Msa0034030 | AT4G21705.1 | 31.818 | 418 | 281 | 4 | 29 | 442 | 23 | 440 | 1.46e-68 | 227 |
| Msa0034030 | AT2G20710.1 | 29.540 | 413 | 284 | 5 | 32 | 441 | 39 | 447 | 1.15e-57 | 198 |
| Msa0034030 | AT4G02820.1 | 29.895 | 475 | 305 | 9 | 8 | 470 | 41 | 499 | 4.33e-55 | 192 |
| Msa0034030 | AT5G27460.1 | 29.070 | 430 | 290 | 6 | 12 | 431 | 21 | 445 | 5.80e-53 | 186 |
| Msa0034030 | AT5G09450.1 | 31.056 | 322 | 216 | 5 | 25 | 340 | 49 | 370 | 2.66e-48 | 171 |
| Msa0034030 | AT2G20710.2 | 29.942 | 344 | 235 | 4 | 100 | 441 | 13 | 352 | 5.68e-47 | 167 |
| Msa0034030 | AT1G28020.1 | 28.267 | 329 | 231 | 5 | 36 | 359 | 41 | 369 | 3.99e-32 | 129 |
| Msa0034030 | AT1G80270.1 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa0034030 | AT1G80270.3 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa0034030 | AT1G80270.2 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa0034030 | AT1G80270.5 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa0034030 | AT1G80270.4 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.30e-24 | 105 |
| Msa0034030 | AT1G15480.1 | 25.205 | 365 | 261 | 9 | 43 | 402 | 138 | 495 | 3.97e-23 | 103 |
| Msa0034030 | AT3G15590.1 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.31e-22 | 101 |
| Msa0034030 | AT3G15590.2 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.31e-22 | 101 |
| Msa0034030 | AT1G07590.1 | 24.633 | 341 | 251 | 5 | 27 | 365 | 64 | 400 | 2.41e-19 | 91.3 |
| Msa0034030 | AT3G11380.1 | 26.780 | 295 | 180 | 6 | 66 | 355 | 78 | 341 | 8.44e-18 | 86.7 |
| Msa0034030 | AT3G11380.1 | 34.722 | 144 | 90 | 4 | 57 | 196 | 372 | 515 | 4.59e-12 | 68.6 |
| Msa0034030 | AT1G28000.1 | 24.567 | 289 | 210 | 6 | 13 | 293 | 13 | 301 | 1.30e-15 | 79.0 |
| Msa0034030 | AT5G21222.1 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa0034030 | AT5G21222.2 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa0034030 | AT5G21222.4 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa0034030 | AT5G21222.3 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.39e-12 | 70.1 |
| Msa0034030 | AT5G02860.1 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa0034030 | AT5G02860.4 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa0034030 | AT5G02860.2 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa0034030 | AT5G02860.5 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
| Msa0034030 | AT5G02860.3 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.36e-11 | 65.5 |
Find 137 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAGGTTTGCCTTCTTATT+TGG | 0.179522 | 1_1:+61931551 | None:intergenic |
| GGGCATAATAAAATTGTTTA+AGG | 0.218164 | 1_1:-61929819 | Msa0034030:CDS |
| AATTACGGCCGTTTGATTTC+CGG | 0.228375 | 1_1:-61931626 | Msa0034030:CDS |
| TTTGATAAGATGGATGAATT+AGG | 0.262779 | 1_1:-61930325 | Msa0034030:CDS |
| GTCTACTTGTTGTTTCTTGA+AGG | 0.279974 | 1_1:+61931689 | None:intergenic |
| ATGAGTTAAGCAAGATTCTT+AGG | 0.291614 | 1_1:-61929484 | Msa0034030:CDS |
| GGCATGTTAGTTATGATTCT+AGG | 0.296691 | 1_1:-61929784 | Msa0034030:CDS |
| CCATATCATTAAGCCTTCTA+AGG | 0.308417 | 1_1:+61929843 | None:intergenic |
| TTATGCTTTCTAACCTTAGA+AGG | 0.314226 | 1_1:-61929856 | Msa0034030:CDS |
| CTTTCCCTTCGATTATATAC+TGG | 0.317101 | 1_1:+61931474 | None:intergenic |
| GCTGCAGAGGACCTTTCTTT+AGG | 0.319713 | 1_1:-61929679 | Msa0034030:CDS |
| GAAAACCAGTACTTATCTTA+AGG | 0.323675 | 1_1:+61929214 | None:intergenic |
| AGGACCTTTCTTTAGGATTC+GGG | 0.341722 | 1_1:-61929672 | Msa0034030:CDS |
| GAGGACCTTTCTTTAGGATT+CGG | 0.351526 | 1_1:-61929673 | Msa0034030:CDS |
| TAGGATTCGGGAAATGTTCA+TGG | 0.370256 | 1_1:-61929660 | Msa0034030:CDS |
| CCTTAGAAGGCTTAATGATA+TGG | 0.371817 | 1_1:-61929843 | Msa0034030:CDS |
| GGAATGTTCTTGTGGGCTTA+AGG | 0.373813 | 1_1:-61929043 | Msa0034030:three_prime_UTR |
| ACAAGAACATTCCCTCCTAT+TGG | 0.387788 | 1_1:+61929053 | None:intergenic |
| TTCTTGCTGAGCCTTTATGC+TGG | 0.387794 | 1_1:-61929959 | Msa0034030:CDS |
| CATATACATAGACATCAAAT+TGG | 0.389303 | 1_1:+61930279 | None:intergenic |
| TTTATTGGAGAAAGGTCAAT+TGG | 0.391224 | 1_1:-61929633 | Msa0034030:CDS |
| CTAGTGATGATTTGATAATC+AGG | 0.397665 | 1_1:-61929248 | Msa0034030:three_prime_UTR |
| GGAAGCTGTGTCGGTCTTTG+AGG | 0.399258 | 1_1:-61929714 | Msa0034030:CDS |
| GTTGGTTGGTGTTGCAGTGC+AGG | 0.407651 | 1_1:-61929762 | Msa0034030:CDS |
| CTCTATGATCGAACCACAGC+AGG | 0.410581 | 1_1:+61931660 | None:intergenic |
| GTTACAAATTCTCGTGGGCT+TGG | 0.417988 | 1_1:+61929363 | None:intergenic |
| TCTACTTGTTGTTTCTTGAA+GGG | 0.418981 | 1_1:+61931690 | None:intergenic |
| CTGCATGAGCTCAGTCCAAT+AGG | 0.427006 | 1_1:-61929068 | Msa0034030:three_prime_UTR |
| GAAGAAGAAACAGATCTTGA+TGG | 0.427741 | 1_1:-61929512 | Msa0034030:CDS |
| AATAAAATTGTTTAAGGAGT+GGG | 0.433563 | 1_1:-61929813 | Msa0034030:CDS |
| TGTTTAAGGAGTGGGAATCT+AGG | 0.433657 | 1_1:-61929805 | Msa0034030:CDS |
| TGGTGCTATGAGCCACTTAG+AGG | 0.441022 | 1_1:-61929609 | Msa0034030:CDS |
| CATTACCAGTCCCAGCATAA+AGG | 0.447077 | 1_1:+61929948 | None:intergenic |
| TCAGTTGGTTAATGTTATGA+AGG | 0.448455 | 1_1:-61930230 | Msa0034030:CDS |
| TCTTGCTGAGCCTTTATGCT+GGG | 0.452519 | 1_1:-61929958 | Msa0034030:CDS |
| ATGGGTGCGGTGTGTATTCA+TGG | 0.462683 | 1_1:+61929323 | None:intergenic |
| GATAGCTCCGATTGGTCACC+GGG | 0.462784 | 1_1:+61929882 | None:intergenic |
| CATAAAGGCTCAGCAAGAAA+TGG | 0.465952 | 1_1:+61929963 | None:intergenic |
| TTAAAGAGGTTTATAGAGTG+TGG | 0.469721 | 1_1:-61929925 | Msa0034030:CDS |
| ATTTGATGTCTATGTATATG+AGG | 0.470560 | 1_1:-61930276 | Msa0034030:CDS |
| CGTCTGCGACACGGTTCCTC+CGG | 0.470565 | 1_1:+61931502 | None:intergenic |
| TTTCTAGGTCGGCTAGTCTT+CGG | 0.471475 | 1_1:+61931528 | None:intergenic |
| TATTTCCTTAAGATAAGTAC+TGG | 0.471573 | 1_1:-61929219 | Msa0034030:three_prime_UTR |
| GCACTTACAGCTTGTGGTGA+AGG | 0.473435 | 1_1:+61929551 | None:intergenic |
| TGGTATTCATACAGTATTGA+AGG | 0.474569 | 1_1:-61929402 | Msa0034030:CDS |
| TATGTGTACTTGTTCTTAGC+AGG | 0.476882 | 1_1:+61930406 | None:intergenic |
| GTTTGATTTCCGGCGGAGGA+AGG | 0.482051 | 1_1:-61931616 | Msa0034030:CDS |
| AGAGACTCTGAGATGAATTA+CGG | 0.482119 | 1_1:-61931641 | Msa0034030:exon |
| TAAAGAGGTTTATAGAGTGT+GGG | 0.486756 | 1_1:-61929924 | Msa0034030:CDS |
| CTGAGCCTTTATGCTGGGAC+TGG | 0.488058 | 1_1:-61929953 | Msa0034030:CDS |
| AGTTATGATTCTAGGTTGGT+TGG | 0.491947 | 1_1:-61929776 | Msa0034030:CDS |
| ATAATCGAAGGGAAAGCCTT+AGG | 0.492451 | 1_1:-61931467 | Msa0034030:CDS |
| TTCAACCACTCCTTTCACTT+TGG | 0.493231 | 1_1:+61930459 | None:intergenic |
| TACGATACTTTCGAAGCTCC+TGG | 0.493561 | 1_1:+61931420 | None:intergenic |
| CACCGGGGTGATCTTCTTGA+GGG | 0.494822 | 1_1:+61929898 | None:intergenic |
| TGTTCTTGTGGGCTTAAGGC+AGG | 0.495189 | 1_1:-61929039 | Msa0034030:three_prime_UTR |
| TGTGCTGCTTTGAATGACCT+TGG | 0.495240 | 1_1:-61930157 | Msa0034030:CDS |
| ATGAATACCAGGAGATGATT+CGG | 0.497054 | 1_1:+61929415 | None:intergenic |
| GGCCGTTTGATTTCCGGCGG+AGG | 0.498441 | 1_1:-61931620 | Msa0034030:CDS |
| TCGGAGAAGCCTTCCTCCGC+CGG | 0.500205 | 1_1:+61931607 | None:intergenic |
| AGATCACCCCGGTGACCAAT+CGG | 0.504230 | 1_1:-61929889 | Msa0034030:CDS |
| TGAACTCGAGAGATGCGTCC+AGG | 0.504375 | 1_1:-61931438 | Msa0034030:CDS |
| GCTGCTATCTATATAAAAGC+TGG | 0.505469 | 1_1:-61930058 | Msa0034030:CDS |
| TTCCTCCGCCGGAAATCAAA+CGG | 0.507328 | 1_1:+61931618 | None:intergenic |
| GCCCACGAGAATTTGTAACT+TGG | 0.511061 | 1_1:-61929359 | Msa0034030:exon |
| GGTCGGCTAGTCTTCGGTAA+AGG | 0.515798 | 1_1:+61931534 | None:intergenic |
| TGAGGTTGAACGTGTTTATG+AGG | 0.516026 | 1_1:-61930134 | Msa0034030:CDS |
| TGTTAGTTATGATTCTAGGT+TGG | 0.519722 | 1_1:-61929780 | Msa0034030:CDS |
| ATAGGAGGGAATGTTCTTGT+GGG | 0.520788 | 1_1:-61929050 | Msa0034030:three_prime_UTR |
| AAGATGAAGACAAAATTGAC+TGG | 0.525053 | 1_1:-61930099 | Msa0034030:CDS |
| TTGTGGGCTTAAGGCAGGAT+AGG | 0.526744 | 1_1:-61929034 | Msa0034030:three_prime_UTR |
| TACTTGTTCTTAGCAGGAGG+AGG | 0.531968 | 1_1:+61930412 | None:intergenic |
| TGGGACTGGTAATGTTAAAG+AGG | 0.532622 | 1_1:-61929939 | Msa0034030:CDS |
| AGATAGCTCCGATTGGTCAC+CGG | 0.533726 | 1_1:+61929881 | None:intergenic |
| CCCACGAGAATTTGTAACTT+GGG | 0.533882 | 1_1:-61929358 | Msa0034030:exon |
| ATTTCCCGAATCCTAAAGAA+AGG | 0.537745 | 1_1:+61929668 | None:intergenic |
| TGCTTTGAATGACCTTGGTG+AGG | 0.538207 | 1_1:-61930152 | Msa0034030:CDS |
| TCACCGGGGTGATCTTCTTG+AGG | 0.539174 | 1_1:+61929897 | None:intergenic |
| TTGGAGAAAGGTCAATTGGA+TGG | 0.539563 | 1_1:-61929629 | Msa0034030:CDS |
| AGAAAAGCACTTACAGCTTG+TGG | 0.542366 | 1_1:+61929545 | None:intergenic |
| AAAGAGGTTTATAGAGTGTG+GGG | 0.547043 | 1_1:-61929923 | Msa0034030:CDS |
| GAAGCTCTCAAGAGCTGCAG+AGG | 0.547848 | 1_1:-61929692 | Msa0034030:CDS |
| AGCTGAGCTTCCAAATAAGA+AGG | 0.548369 | 1_1:-61931561 | Msa0034030:CDS |
| GATCTTGTGTCCAAAGTGAA+AGG | 0.549809 | 1_1:-61930469 | Msa0034030:CDS |
| ACTGCATCCGAATCATCTCC+TGG | 0.552993 | 1_1:-61929422 | Msa0034030:CDS |
| AGAAATGGTAAGTTTCGCGT+TGG | 0.553517 | 1_1:+61929978 | None:intergenic |
| TTACAGCTTGTGGTGAAGGT+TGG | 0.556374 | 1_1:+61929555 | None:intergenic |
| TAATAAAATTGTTTAAGGAG+TGG | 0.559489 | 1_1:-61929814 | Msa0034030:CDS |
| TTCAATACTGTATGAATACC+AGG | 0.559830 | 1_1:+61929404 | None:intergenic |
| TCCCAAGTTACAAATTCTCG+TGG | 0.560694 | 1_1:+61929357 | None:intergenic |
| TTGAACCAGTATATAATCGA+AGG | 0.561352 | 1_1:-61931479 | Msa0034030:CDS |
| ATTGGTTGCAGATAATGGAA+TGG | 0.561950 | 1_1:-61930543 | Msa0034030:intron |
| AATAGGAGGGAATGTTCTTG+TGG | 0.564209 | 1_1:-61929051 | Msa0034030:three_prime_UTR |
| AGCTGAGTTGATGCTTAAGA+AGG | 0.568467 | 1_1:-61930023 | Msa0034030:CDS |
| TGGTAAGTTTCGCGTTGGCG+CGG | 0.569478 | 1_1:+61929983 | None:intergenic |
| CTGAAAGTGCGGCCTCTAAG+TGG | 0.571070 | 1_1:+61929597 | None:intergenic |
| ATGTCTATGTATATGAGGCT+AGG | 0.571867 | 1_1:-61930271 | Msa0034030:CDS |
| TAGATTCCATCATGCATTCG+AGG | 0.573744 | 1_1:-61931399 | Msa0034030:intron |
| TTATCAAATCATCACTAGCT+CGG | 0.573776 | 1_1:+61929253 | None:intergenic |
| CATGGACAAGGAAGCTGTGT+CGG | 0.574022 | 1_1:-61929723 | Msa0034030:CDS |
| CATGAGCTCAGTCCAATAGG+AGG | 0.577937 | 1_1:-61929065 | Msa0034030:three_prime_UTR |
| CTGGTTCAACGTCTGCGACA+CGG | 0.577943 | 1_1:+61931493 | None:intergenic |
| ACCGTCGAAAGTTCCTCAGT+TGG | 0.578763 | 1_1:-61930245 | Msa0034030:CDS |
| ACGACTATGCACGGCTGCGA+CGG | 0.581337 | 1_1:-61931585 | Msa0034030:CDS |
| TAGAAGGCTTAATGATATGG+AGG | 0.581977 | 1_1:-61929840 | Msa0034030:CDS |
| GAGGCCGCACTTTCAGAAGT+CGG | 0.583270 | 1_1:-61929590 | Msa0034030:CDS |
| ACCAACTGAGGAACTTTCGA+CGG | 0.585028 | 1_1:+61930244 | None:intergenic |
| CATAATAAGATAGCTCCGAT+TGG | 0.585163 | 1_1:+61929874 | None:intergenic |
| GCGATACCTCGAATGCATGA+TGG | 0.585983 | 1_1:+61931393 | None:intergenic |
| GTGTACTTGTTCTTAGCAGG+AGG | 0.589015 | 1_1:+61930409 | None:intergenic |
| TGGTTAATGTTATGAAGGAG+AGG | 0.593769 | 1_1:-61930225 | Msa0034030:CDS |
| ATCACATGTGTATCATATGT+AGG | 0.598621 | 1_1:-61929287 | Msa0034030:three_prime_UTR |
| TTCATAACATTAACCAACTG+AGG | 0.600464 | 1_1:+61930232 | None:intergenic |
| AGAAGGCTTAATGATATGGA+GGG | 0.604451 | 1_1:-61929839 | Msa0034030:CDS |
| GCTAAGAACAAGTACACATA+CGG | 0.606065 | 1_1:-61930403 | Msa0034030:CDS |
| TCTTCTAAACTGTTACTGCA+AGG | 0.614146 | 1_1:-61930377 | Msa0034030:CDS |
| TACGGCCGTTTGATTTCCGG+CGG | 0.616646 | 1_1:-61931623 | Msa0034030:CDS |
| GGCTTACTTGAGTCAAAACA+TGG | 0.616784 | 1_1:-61929741 | Msa0034030:CDS |
| CCCAAGTTACAAATTCTCGT+GGG | 0.622015 | 1_1:+61929358 | None:intergenic |
| CTTGAGTCAAAACATGGACA+AGG | 0.623542 | 1_1:-61929735 | Msa0034030:CDS |
| AAGAGGTTTATAGAGTGTGG+GGG | 0.627275 | 1_1:-61929922 | Msa0034030:CDS |
| TGAACCAGTATATAATCGAA+GGG | 0.630767 | 1_1:-61931478 | Msa0034030:CDS |
| TCGCAGCCGTGCATAGTCGT+CGG | 0.630947 | 1_1:+61931588 | None:intergenic |
| CTAGCCGACCTAGAAAAGAC+CGG | 0.635101 | 1_1:-61931521 | Msa0034030:CDS |
| TGAGTTGATGCTTAAGAAGG+TGG | 0.644162 | 1_1:-61930020 | Msa0034030:CDS |
| ATGAGCTCAGTCCAATAGGA+GGG | 0.651102 | 1_1:-61929064 | Msa0034030:three_prime_UTR |
| TAATGGAATGGATGATGATG+AGG | 0.652324 | 1_1:-61930531 | Msa0034030:CDS |
| CAAGGAACTAATGCTAGACA+AGG | 0.652550 | 1_1:-61930359 | Msa0034030:CDS |
| GACCCTCAAGAAGATCACCC+CGG | 0.654594 | 1_1:-61929900 | Msa0034030:CDS |
| AGTAGACAAAATCCCTGCTG+TGG | 0.658513 | 1_1:-61931673 | Msa0034030:five_prime_UTR |
| ATCGCCGACTTCTGAAAGTG+CGG | 0.674194 | 1_1:+61929586 | None:intergenic |
| TCTATGATCGAACCACAGCA+GGG | 0.676707 | 1_1:+61931661 | None:intergenic |
| GCTTCTCCGACGACTATGCA+CGG | 0.690136 | 1_1:-61931594 | Msa0034030:CDS |
| GCCGACCTAGAAAAGACCGG+AGG | 0.743237 | 1_1:-61931518 | Msa0034030:CDS |
| TGTGTCCAAAGTGAAAGGAG+TGG | 0.764655 | 1_1:-61930464 | Msa0034030:CDS |
| AAACACGTTCAACCTCACCA+AGG | 0.766259 | 1_1:+61930140 | None:intergenic |
| ATAGCTCCGATTGGTCACCG+GGG | 0.806286 | 1_1:+61929883 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAATGATGTTTTGAT+TGG | - | chr1_1:61930173-61930192 | Msa0034030:CDS | 15.0% |
| !! | TCAACATGAATCAAAATTTA+GGG | + | chr1_1:61929389-61929408 | None:intergenic | 20.0% |
| !! | TTGTTAATAAATGAATCAAC+TGG | - | chr1_1:61929640-61929659 | Msa0034030:CDS | 20.0% |
| !! | AGATTTAAAGATTAACAAGT+TGG | - | chr1_1:61930021-61930040 | Msa0034030:CDS | 20.0% |
| !! | TAATAAAATTGTTTAAGGAG+TGG | - | chr1_1:61930920-61930939 | Msa0034030:intron | 20.0% |
| !! | AATAAAATTGTTTAAGGAGT+GGG | - | chr1_1:61930921-61930940 | Msa0034030:intron | 20.0% |
| !! | TTAAAAAAGACATAAACTGT+CGG | - | chr1_1:61931610-61931629 | Msa0034030:CDS | 20.0% |
| !! | AAATTTAGGGTGGAAAAAAT+TGG | + | chr1_1:61929376-61929395 | None:intergenic | 25.0% |
| ! | CTCAACATGAATCAAAATTT+AGG | + | chr1_1:61929390-61929409 | None:intergenic | 25.0% |
| ! | AAAATTAGTTAGAGTCGTTT+AGG | + | chr1_1:61929486-61929505 | None:intergenic | 25.0% |
| ! | ACTAATTATGTTCTGTGTAA+TGG | - | chr1_1:61929604-61929623 | Msa0034030:CDS | 25.0% |
| ! | TTATATAGTAGTCACAAGAT+CGG | - | chr1_1:61929705-61929724 | Msa0034030:CDS | 25.0% |
| !!! | TTTACCATCTTTTTTACGAT+AGG | + | chr1_1:61929863-61929882 | None:intergenic | 25.0% |
| !! | TAAAGATTAACAAGTTGGAT+AGG | - | chr1_1:61930026-61930045 | Msa0034030:CDS | 25.0% |
| !! | AAAGATTAACAAGTTGGATA+GGG | - | chr1_1:61930027-61930046 | Msa0034030:CDS | 25.0% |
| ! | TAGTATATGATAGAACACTA+TGG | - | chr1_1:61930053-61930072 | Msa0034030:CDS | 25.0% |
| !! | TGAGGCAAATTAATTTTTCA+TGG | - | chr1_1:61930221-61930240 | Msa0034030:CDS | 25.0% |
| !! | GAGGCAAATTAATTTTTCAT+GGG | - | chr1_1:61930222-61930241 | Msa0034030:CDS | 25.0% |
| !!! | ATTGTCTCATTTTGATAAGA+TGG | - | chr1_1:61930399-61930418 | Msa0034030:CDS | 25.0% |
| ! | TTTGATAAGATGGATGAATT+AGG | - | chr1_1:61930409-61930428 | Msa0034030:CDS | 25.0% |
| ! | CATATACATAGACATCAAAT+TGG | + | chr1_1:61930458-61930477 | None:intergenic | 25.0% |
| ! | ATTTGATGTCTATGTATATG+AGG | - | chr1_1:61930458-61930477 | Msa0034030:CDS | 25.0% |
| !! | CTGAATTTACATACATTTTG+TGG | - | chr1_1:61930545-61930564 | Msa0034030:intron | 25.0% |
| ! | GGGCATAATAAAATTGTTTA+AGG | - | chr1_1:61930915-61930934 | Msa0034030:intron | 25.0% |
| !!! | AATGTTCATGGTGTTTTTAT+TGG | - | chr1_1:61931086-61931105 | Msa0034030:intron | 25.0% |
| !!! | AGTAATGCAAGTTTTAATAG+AGG | + | chr1_1:61931295-61931314 | None:intergenic | 25.0% |
| !!! | GTGATTGTTTTTTCAATGAT+GGG | + | chr1_1:61931432-61931451 | None:intergenic | 25.0% |
| !!! | TGTGATTGTTTTTTCAATGA+TGG | + | chr1_1:61931433-61931452 | None:intergenic | 25.0% |
| ! | TATTTCCTTAAGATAAGTAC+TGG | - | chr1_1:61931515-61931534 | Msa0034030:CDS | 25.0% |
| !!! | TTTCTTGAAGGGTTTTGTTA+GGG | + | chr1_1:61929036-61929055 | None:intergenic | 30.0% |
| !! | TCTACTTGTTGTTTCTTGAA+GGG | + | chr1_1:61929047-61929066 | None:intergenic | 30.0% |
| TAAAGGTTTGCCTTCTTATT+TGG | + | chr1_1:61929186-61929205 | None:intergenic | 30.0% | |
| TTGAACCAGTATATAATCGA+AGG | - | chr1_1:61929255-61929274 | Msa0034030:three_prime_UTR | 30.0% | |
| TGAACCAGTATATAATCGAA+GGG | - | chr1_1:61929256-61929275 | Msa0034030:three_prime_UTR | 30.0% | |
| ACATGAATCAAAATTTAGGG+TGG | + | chr1_1:61929386-61929405 | None:intergenic | 30.0% | |
| TGATGATAAACTATGAAGCA+TGG | + | chr1_1:61929564-61929583 | None:intergenic | 30.0% | |
| !!! | AATTAGTTTTGCCTTGTCTA+TGG | + | chr1_1:61929591-61929610 | None:intergenic | 30.0% |
| !!! | CGCTTATTTTATTCTCATGT+TGG | + | chr1_1:61929757-61929776 | None:intergenic | 30.0% |
| ATGACAATATTAGAGAGAGT+TGG | - | chr1_1:61929830-61929849 | Msa0034030:CDS | 30.0% | |
| TGACAATATTAGAGAGAGTT+GGG | - | chr1_1:61929831-61929850 | Msa0034030:CDS | 30.0% | |
| ! | AGATGGTAAAAGTTTGACTT+AGG | - | chr1_1:61929873-61929892 | Msa0034030:CDS | 30.0% |
| !! | TTTTGATTGGTTGCAGATAA+TGG | - | chr1_1:61930186-61930205 | Msa0034030:CDS | 30.0% |
| TTCATAACATTAACCAACTG+AGG | + | chr1_1:61930505-61930524 | None:intergenic | 30.0% | |
| TCAGTTGGTTAATGTTATGA+AGG | - | chr1_1:61930504-61930523 | Msa0034030:CDS | 30.0% | |
| ! | ACATACATTTTGTGGATGAA+TGG | - | chr1_1:61930553-61930572 | Msa0034030:intron | 30.0% |
| AAGATGAAGACAAAATTGAC+TGG | - | chr1_1:61930635-61930654 | Msa0034030:intron | 30.0% | |
| ! | CTTTTATATAGATAGCAGCA+AGG | + | chr1_1:61930675-61930694 | None:intergenic | 30.0% |
| TTAAAGAGGTTTATAGAGTG+TGG | - | chr1_1:61930809-61930828 | Msa0034030:intron | 30.0% | |
| TAAAGAGGTTTATAGAGTGT+GGG | - | chr1_1:61930810-61930829 | Msa0034030:intron | 30.0% | |
| TTATGCTTTCTAACCTTAGA+AGG | - | chr1_1:61930878-61930897 | Msa0034030:intron | 30.0% | |
| TGTTAGTTATGATTCTAGGT+TGG | - | chr1_1:61930954-61930973 | Msa0034030:intron | 30.0% | |
| !! | ATGGTGTTTTTATTGGAGAA+AGG | - | chr1_1:61931093-61931112 | Msa0034030:intron | 30.0% |
| TTTATTGGAGAAAGGTCAAT+TGG | - | chr1_1:61931101-61931120 | Msa0034030:intron | 30.0% | |
| ATGAGTTAAGCAAGATTCTT+AGG | - | chr1_1:61931250-61931269 | Msa0034030:intron | 30.0% | |
| TTCAATACTGTATGAATACC+AGG | + | chr1_1:61931333-61931352 | None:intergenic | 30.0% | |
| ! | TGGTATTCATACAGTATTGA+AGG | - | chr1_1:61931332-61931351 | Msa0034030:intron | 30.0% |
| ATCACATGTGTATCATATGT+AGG | - | chr1_1:61931447-61931466 | Msa0034030:CDS | 30.0% | |
| TTATCAAATCATCACTAGCT+CGG | + | chr1_1:61931484-61931503 | None:intergenic | 30.0% | |
| ! | CTAGTGATGATTTGATAATC+AGG | - | chr1_1:61931486-61931505 | Msa0034030:CDS | 30.0% |
| GAAAACCAGTACTTATCTTA+AGG | + | chr1_1:61931523-61931542 | None:intergenic | 30.0% | |
| !!! | TCTAGTTGTTTTGTTTGCTA+TGG | - | chr1_1:61931570-61931589 | Msa0034030:CDS | 30.0% |
| !!! | GTTTCTTGAAGGGTTTTGTT+AGG | + | chr1_1:61929037-61929056 | None:intergenic | 35.0% |
| !! | GTCTACTTGTTGTTTCTTGA+AGG | + | chr1_1:61929048-61929067 | None:intergenic | 35.0% |
| !! | AGAGACTCTGAGATGAATTA+CGG | - | chr1_1:61929093-61929112 | Msa0034030:three_prime_UTR | 35.0% |
| CTTTCCCTTCGATTATATAC+TGG | + | chr1_1:61929263-61929282 | None:intergenic | 35.0% | |
| ATCATCACAATCCATAGACA+AGG | - | chr1_1:61929577-61929596 | Msa0034030:CDS | 35.0% | |
| ! | AAATGAATCAACTGGCTTAG+TGG | - | chr1_1:61929648-61929667 | Msa0034030:CDS | 35.0% |
| AGCACCTATCGTAAAAAAGA+TGG | - | chr1_1:61929856-61929875 | Msa0034030:CDS | 35.0% | |
| ! | TGGTAAAAGTTTGACTTAGG+TGG | - | chr1_1:61929876-61929895 | Msa0034030:CDS | 35.0% |
| ! | GACCTGTAGATTTTGTAGTA+CGG | - | chr1_1:61929918-61929937 | Msa0034030:CDS | 35.0% |
| ! | CAAGTCTTATCCCACTAATT+GGG | + | chr1_1:61930103-61930122 | None:intergenic | 35.0% |
| !! | ATTGGTTGCAGATAATGGAA+TGG | - | chr1_1:61930191-61930210 | Msa0034030:CDS | 35.0% |
| ! | TAATGGAATGGATGATGATG+AGG | - | chr1_1:61930203-61930222 | Msa0034030:CDS | 35.0% |
| TATGTGTACTTGTTCTTAGC+AGG | + | chr1_1:61930331-61930350 | None:intergenic | 35.0% | |
| GCTAAGAACAAGTACACATA+CGG | - | chr1_1:61930331-61930350 | Msa0034030:CDS | 35.0% | |
| TCTTCTAAACTGTTACTGCA+AGG | - | chr1_1:61930357-61930376 | Msa0034030:CDS | 35.0% | |
| ATGTCTATGTATATGAGGCT+AGG | - | chr1_1:61930463-61930482 | Msa0034030:CDS | 35.0% | |
| TGGTTAATGTTATGAAGGAG+AGG | - | chr1_1:61930509-61930528 | Msa0034030:CDS | 35.0% | |
| GCTGCTATCTATATAAAAGC+TGG | - | chr1_1:61930676-61930695 | Msa0034030:intron | 35.0% | |
| AAAGAGGTTTATAGAGTGTG+GGG | - | chr1_1:61930811-61930830 | Msa0034030:intron | 35.0% | |
| CATAATAAGATAGCTCCGAT+TGG | + | chr1_1:61930863-61930882 | None:intergenic | 35.0% | |
| CCATATCATTAAGCCTTCTA+AGG | + | chr1_1:61930894-61930913 | None:intergenic | 35.0% | |
| CCTTAGAAGGCTTAATGATA+TGG | - | chr1_1:61930891-61930910 | Msa0034030:intron | 35.0% | |
| TAGAAGGCTTAATGATATGG+AGG | - | chr1_1:61930894-61930913 | Msa0034030:intron | 35.0% | |
| AGAAGGCTTAATGATATGGA+GGG | - | chr1_1:61930895-61930914 | Msa0034030:intron | 35.0% | |
| GGCATGTTAGTTATGATTCT+AGG | - | chr1_1:61930950-61930969 | Msa0034030:intron | 35.0% | |
| !! | AGTTATGATTCTAGGTTGGT+TGG | - | chr1_1:61930958-61930977 | Msa0034030:intron | 35.0% |
| ATTTCCCGAATCCTAAAGAA+AGG | + | chr1_1:61931069-61931088 | None:intergenic | 35.0% | |
| GAAGAAGAAACAGATCTTGA+TGG | - | chr1_1:61931222-61931241 | Msa0034030:intron | 35.0% | |
| ATGAATACCAGGAGATGATT+CGG | + | chr1_1:61931322-61931341 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTCAATGATGGGTG+CGG | + | chr1_1:61931427-61931446 | None:intergenic | 35.0% |
| AAAAAGACATAAACTGTCGG+TGG | - | chr1_1:61931613-61931632 | Msa0034030:CDS | 35.0% | |
| ! | AATTACGGCCGTTTGATTTC+CGG | - | chr1_1:61929108-61929127 | Msa0034030:three_prime_UTR | 40.0% |
| AGCTGAGCTTCCAAATAAGA+AGG | - | chr1_1:61929173-61929192 | Msa0034030:three_prime_UTR | 40.0% | |
| ATAATCGAAGGGAAAGCCTT+AGG | - | chr1_1:61929267-61929286 | Msa0034030:three_prime_UTR | 40.0% | |
| ! | CTCGAGTTCATCTTTTCCTA+AGG | + | chr1_1:61929286-61929305 | None:intergenic | 40.0% |
| TAGATTCCATCATGCATTCG+AGG | - | chr1_1:61929335-61929354 | Msa0034030:three_prime_UTR | 40.0% | |
| !! | GTAACATCGACTCTGATTGA+AGG | - | chr1_1:61929425-61929444 | Msa0034030:CDS | 40.0% |
| ! | TAAAGTACCACTCAAGCTGA+AGG | - | chr1_1:61929677-61929696 | Msa0034030:CDS | 40.0% |
| ! | AAAGTACCACTCAAGCTGAA+GGG | - | chr1_1:61929678-61929697 | Msa0034030:CDS | 40.0% |
| ACAAGATCGGTGATGTTGTA+TGG | - | chr1_1:61929718-61929737 | Msa0034030:CDS | 40.0% | |
| ! | AAGTTTGACTTAGGTGGTCT+AGG | - | chr1_1:61929882-61929901 | Msa0034030:CDS | 40.0% |
| CTCCGTACTACAAAATCTAC+AGG | + | chr1_1:61929923-61929942 | None:intergenic | 40.0% | |
| TGATTTGACTAACCTCCATC+TGG | + | chr1_1:61929952-61929971 | None:intergenic | 40.0% | |
| ! | GAGGTTAGTCAAATCACTTG+AGG | - | chr1_1:61929956-61929975 | Msa0034030:CDS | 40.0% |
| CTTATCCCACTAATTGGGAT+CGG | + | chr1_1:61930098-61930117 | None:intergenic | 40.0% | |
| ! | CCAAGTCTTATCCCACTAAT+TGG | + | chr1_1:61930104-61930123 | None:intergenic | 40.0% |
| CCAATTAGTGGGATAAGACT+TGG | - | chr1_1:61930101-61930120 | Msa0034030:CDS | 40.0% | |
| GATCTTGTGTCCAAAGTGAA+AGG | - | chr1_1:61930265-61930284 | Msa0034030:CDS | 40.0% | |
| TTCAACCACTCCTTTCACTT+TGG | + | chr1_1:61930278-61930297 | None:intergenic | 40.0% | |
| CAAGGAACTAATGCTAGACA+AGG | - | chr1_1:61930375-61930394 | Msa0034030:CDS | 40.0% | |
| TGAGGTTGAACGTGTTTATG+AGG | - | chr1_1:61930600-61930619 | Msa0034030:intron | 40.0% | |
| !! | AGCTGAGTTGATGCTTAAGA+AGG | - | chr1_1:61930711-61930730 | Msa0034030:intron | 40.0% |
| !! | TGAGTTGATGCTTAAGAAGG+TGG | - | chr1_1:61930714-61930733 | Msa0034030:intron | 40.0% |
| AGAAATGGTAAGTTTCGCGT+TGG | + | chr1_1:61930759-61930778 | None:intergenic | 40.0% | |
| CATAAAGGCTCAGCAAGAAA+TGG | + | chr1_1:61930774-61930793 | None:intergenic | 40.0% | |
| ! | TGGGACTGGTAATGTTAAAG+AGG | - | chr1_1:61930795-61930814 | Msa0034030:intron | 40.0% |
| AAGAGGTTTATAGAGTGTGG+GGG | - | chr1_1:61930812-61930831 | Msa0034030:intron | 40.0% | |
| TGTTTAAGGAGTGGGAATCT+AGG | - | chr1_1:61930929-61930948 | Msa0034030:intron | 40.0% | |
| GGCTTACTTGAGTCAAAACA+TGG | - | chr1_1:61930993-61931012 | Msa0034030:intron | 40.0% | |
| CTTGAGTCAAAACATGGACA+AGG | - | chr1_1:61930999-61931018 | Msa0034030:intron | 40.0% | |
| !! | GAGGACCTTTCTTTAGGATT+CGG | - | chr1_1:61931061-61931080 | Msa0034030:intron | 40.0% |
| !! | AGGACCTTTCTTTAGGATTC+GGG | - | chr1_1:61931062-61931081 | Msa0034030:intron | 40.0% |
| TAGGATTCGGGAAATGTTCA+TGG | - | chr1_1:61931074-61931093 | Msa0034030:intron | 40.0% | |
| TTGGAGAAAGGTCAATTGGA+TGG | - | chr1_1:61931105-61931124 | Msa0034030:intron | 40.0% | |
| !! | AGAAAAGCACTTACAGCTTG+TGG | + | chr1_1:61931192-61931211 | None:intergenic | 40.0% |
| CCCAAGTTACAAATTCTCGT+GGG | + | chr1_1:61931379-61931398 | None:intergenic | 40.0% | |
| CCCACGAGAATTTGTAACTT+GGG | - | chr1_1:61931376-61931395 | Msa0034030:intron | 40.0% | |
| TCCCAAGTTACAAATTCTCG+TGG | + | chr1_1:61931380-61931399 | None:intergenic | 40.0% | |
| ACAAGAACATTCCCTCCTAT+TGG | + | chr1_1:61931684-61931703 | None:intergenic | 40.0% | |
| AATAGGAGGGAATGTTCTTG+TGG | - | chr1_1:61931683-61931702 | Msa0034030:five_prime_UTR | 40.0% | |
| ATAGGAGGGAATGTTCTTGT+GGG | - | chr1_1:61931684-61931703 | Msa0034030:five_prime_UTR | 40.0% | |
| AGTAGACAAAATCCCTGCTG+TGG | - | chr1_1:61929061-61929080 | Msa0034030:three_prime_UTR | 45.0% | |
| TCTATGATCGAACCACAGCA+GGG | + | chr1_1:61929076-61929095 | None:intergenic | 45.0% | |
| !! | TTTCTAGGTCGGCTAGTCTT+CGG | + | chr1_1:61929209-61929228 | None:intergenic | 45.0% |
| TACGATACTTTCGAAGCTCC+TGG | + | chr1_1:61929317-61929336 | None:intergenic | 45.0% | |
| AATTGTCCCTTCAGCTTGAG+TGG | + | chr1_1:61929687-61929706 | None:intergenic | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | - | chr1_1:61929788-61929807 | Msa0034030:CDS | 45.0% | |
| AGTCAAATCACTTGAGGCAG+AGG | - | chr1_1:61929962-61929981 | Msa0034030:CDS | 45.0% | |
| ACTAATTGGGATCGGCTACA+TGG | + | chr1_1:61930090-61930109 | None:intergenic | 45.0% | |
| ATGTAGCCGATCCCAATTAG+TGG | - | chr1_1:61930089-61930108 | Msa0034030:CDS | 45.0% | |
| TGTAGCCGATCCCAATTAGT+GGG | - | chr1_1:61930090-61930109 | Msa0034030:CDS | 45.0% | |
| ! | AGTGGGATAAGACTTGGTTG+TGG | - | chr1_1:61930107-61930126 | Msa0034030:CDS | 45.0% |
| TGTGTCCAAAGTGAAAGGAG+TGG | - | chr1_1:61930270-61930289 | Msa0034030:CDS | 45.0% | |
| TACTTGTTCTTAGCAGGAGG+AGG | + | chr1_1:61930325-61930344 | None:intergenic | 45.0% | |
| GTGTACTTGTTCTTAGCAGG+AGG | + | chr1_1:61930328-61930347 | None:intergenic | 45.0% | |
| ACCAACTGAGGAACTTTCGA+CGG | + | chr1_1:61930493-61930512 | None:intergenic | 45.0% | |
| !! | TGTGCTGCTTTGAATGACCT+TGG | - | chr1_1:61930577-61930596 | Msa0034030:intron | 45.0% |
| ! | TGCTTTGAATGACCTTGGTG+AGG | - | chr1_1:61930582-61930601 | Msa0034030:intron | 45.0% |
| AAACACGTTCAACCTCACCA+AGG | + | chr1_1:61930597-61930616 | None:intergenic | 45.0% | |
| TTCTTGCTGAGCCTTTATGC+TGG | - | chr1_1:61930775-61930794 | Msa0034030:intron | 45.0% | |
| TCTTGCTGAGCCTTTATGCT+GGG | - | chr1_1:61930776-61930795 | Msa0034030:intron | 45.0% | |
| CATTACCAGTCCCAGCATAA+AGG | + | chr1_1:61930789-61930808 | None:intergenic | 45.0% | |
| TTACAGCTTGTGGTGAAGGT+TGG | + | chr1_1:61931182-61931201 | None:intergenic | 45.0% | |
| GTTACAAATTCTCGTGGGCT+TGG | + | chr1_1:61931374-61931393 | None:intergenic | 45.0% | |
| GCCCACGAGAATTTGTAACT+TGG | - | chr1_1:61931375-61931394 | Msa0034030:intron | 45.0% | |
| ATGAGCTCAGTCCAATAGGA+GGG | - | chr1_1:61931670-61931689 | Msa0034030:five_prime_UTR | 45.0% | |
| GGAATGTTCTTGTGGGCTTA+AGG | - | chr1_1:61931691-61931710 | Msa0034030:five_prime_UTR | 45.0% | |
| CTCTATGATCGAACCACAGC+AGG | + | chr1_1:61929077-61929096 | None:intergenic | 50.0% | |
| TTCCTCCGCCGGAAATCAAA+CGG | + | chr1_1:61929119-61929138 | None:intergenic | 50.0% | |
| CTAGCCGACCTAGAAAAGAC+CGG | - | chr1_1:61929213-61929232 | Msa0034030:three_prime_UTR | 50.0% | |
| ! | TCCTCCGGTCTTTTCTAGGT+CGG | + | chr1_1:61929220-61929239 | None:intergenic | 50.0% |
| GCGATACCTCGAATGCATGA+TGG | + | chr1_1:61929344-61929363 | None:intergenic | 50.0% | |
| GTCGTTTAGGTGTCAGACAC+CGG | + | chr1_1:61929473-61929492 | None:intergenic | 50.0% | |
| AAATAAGCGTAGCCGAGACG+AGG | - | chr1_1:61929768-61929787 | Msa0034030:CDS | 50.0% | |
| CCAACACAACATCCTCGTCT+CGG | + | chr1_1:61929783-61929802 | None:intergenic | 50.0% | |
| AGTACGGAGAGTAGACCAGA+TGG | - | chr1_1:61929934-61929953 | Msa0034030:CDS | 50.0% | |
| ACCGTCGAAAGTTCCTCAGT+TGG | - | chr1_1:61930489-61930508 | Msa0034030:CDS | 50.0% | |
| ! | AGATAGCTCCGATTGGTCAC+CGG | + | chr1_1:61930856-61930875 | None:intergenic | 50.0% |
| CATGGACAAGGAAGCTGTGT+CGG | - | chr1_1:61931011-61931030 | Msa0034030:intron | 50.0% | |
| GCTGCAGAGGACCTTTCTTT+AGG | - | chr1_1:61931055-61931074 | Msa0034030:intron | 50.0% | |
| !! | TGGTGCTATGAGCCACTTAG+AGG | - | chr1_1:61931125-61931144 | Msa0034030:intron | 50.0% |
| !! | ATCGCCGACTTCTGAAAGTG+CGG | + | chr1_1:61931151-61931170 | None:intergenic | 50.0% |
| GCACTTACAGCTTGTGGTGA+AGG | + | chr1_1:61931186-61931205 | None:intergenic | 50.0% | |
| ACTGCATCCGAATCATCTCC+TGG | - | chr1_1:61931312-61931331 | Msa0034030:intron | 50.0% | |
| ATGGGTGCGGTGTGTATTCA+TGG | + | chr1_1:61931414-61931433 | None:intergenic | 50.0% | |
| CTGCATGAGCTCAGTCCAAT+AGG | - | chr1_1:61931666-61931685 | Msa0034030:five_prime_UTR | 50.0% | |
| CATGAGCTCAGTCCAATAGG+AGG | - | chr1_1:61931669-61931688 | Msa0034030:five_prime_UTR | 50.0% | |
| TGTTCTTGTGGGCTTAAGGC+AGG | - | chr1_1:61931695-61931714 | Msa0034030:five_prime_UTR | 50.0% | |
| TTGTGGGCTTAAGGCAGGAT+AGG | - | chr1_1:61931700-61931719 | Msa0034030:five_prime_UTR | 50.0% | |
| ! | TACGGCCGTTTGATTTCCGG+CGG | - | chr1_1:61929111-61929130 | Msa0034030:three_prime_UTR | 55.0% |
| ! | GTTTGATTTCCGGCGGAGGA+AGG | - | chr1_1:61929118-61929137 | Msa0034030:three_prime_UTR | 55.0% |
| GCTTCTCCGACGACTATGCA+CGG | - | chr1_1:61929140-61929159 | Msa0034030:three_prime_UTR | 55.0% | |
| !! | GGTCGGCTAGTCTTCGGTAA+AGG | + | chr1_1:61929203-61929222 | None:intergenic | 55.0% |
| ! | CGGTTCCTCCGGTCTTTTCT+AGG | + | chr1_1:61929224-61929243 | None:intergenic | 55.0% |
| CTGGTTCAACGTCTGCGACA+CGG | + | chr1_1:61929244-61929263 | None:intergenic | 55.0% | |
| TGAACTCGAGAGATGCGTCC+AGG | - | chr1_1:61929296-61929315 | Msa0034030:three_prime_UTR | 55.0% | |
| GTTCCGTGTCCAACACTTGC+CGG | - | chr1_1:61929451-61929470 | Msa0034030:CDS | 55.0% | |
| !! | ACACCGGCAAGTGTTGGACA+CGG | + | chr1_1:61929457-61929476 | None:intergenic | 55.0% |
| TGTCAGACACCGGCAAGTGT+TGG | + | chr1_1:61929463-61929482 | None:intergenic | 55.0% | |
| CCGAGACGAGGATGTTGTGT+TGG | - | chr1_1:61929780-61929799 | Msa0034030:CDS | 55.0% | |
| ACGGAGAGTAGACCAGATGG+AGG | - | chr1_1:61929937-61929956 | Msa0034030:CDS | 55.0% | |
| ! | TGGTAAGTTTCGCGTTGGCG+CGG | + | chr1_1:61930754-61930773 | None:intergenic | 55.0% |
| CTGAGCCTTTATGCTGGGAC+TGG | - | chr1_1:61930781-61930800 | Msa0034030:intron | 55.0% | |
| GACCCTCAAGAAGATCACCC+CGG | - | chr1_1:61930834-61930853 | Msa0034030:intron | 55.0% | |
| CACCGGGGTGATCTTCTTGA+GGG | + | chr1_1:61930839-61930858 | None:intergenic | 55.0% | |
| TCACCGGGGTGATCTTCTTG+AGG | + | chr1_1:61930840-61930859 | None:intergenic | 55.0% | |
| AGATCACCCCGGTGACCAAT+CGG | - | chr1_1:61930845-61930864 | Msa0034030:intron | 55.0% | |
| ! | ATAGCTCCGATTGGTCACCG+GGG | + | chr1_1:61930854-61930873 | None:intergenic | 55.0% |
| ! | GATAGCTCCGATTGGTCACC+GGG | + | chr1_1:61930855-61930874 | None:intergenic | 55.0% |
| !! | GTTGGTTGGTGTTGCAGTGC+AGG | - | chr1_1:61930972-61930991 | Msa0034030:intron | 55.0% |
| ! | GGAAGCTGTGTCGGTCTTTG+AGG | - | chr1_1:61931020-61931039 | Msa0034030:intron | 55.0% |
| GAAGCTCTCAAGAGCTGCAG+AGG | - | chr1_1:61931042-61931061 | Msa0034030:intron | 55.0% | |
| ! | CTGAAAGTGCGGCCTCTAAG+TGG | + | chr1_1:61931140-61931159 | None:intergenic | 55.0% |
| GAGGCCGCACTTTCAGAAGT+CGG | - | chr1_1:61931144-61931163 | Msa0034030:intron | 55.0% | |
| TCGCAGCCGTGCATAGTCGT+CGG | + | chr1_1:61929149-61929168 | None:intergenic | 60.0% | |
| ACGACTATGCACGGCTGCGA+CGG | - | chr1_1:61929149-61929168 | Msa0034030:three_prime_UTR | 60.0% | |
| GCCGACCTAGAAAAGACCGG+AGG | - | chr1_1:61929216-61929235 | Msa0034030:three_prime_UTR | 60.0% | |
| ! | GGCCGTTTGATTTCCGGCGG+AGG | - | chr1_1:61929114-61929133 | Msa0034030:three_prime_UTR | 65.0% |
| TCGGAGAAGCCTTCCTCCGC+CGG | + | chr1_1:61929130-61929149 | None:intergenic | 65.0% | |
| CGTCTGCGACACGGTTCCTC+CGG | + | chr1_1:61929235-61929254 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 61929030 | 61931726 | 61929030 | ID=Msa0034030;Name=Msa0034030 |
| chr1_1 | mRNA | 61929030 | 61931726 | 61929030 | ID=Msa0034030-mRNA-1;Parent=Msa0034030;Name=Msa0034030-mRNA-1;_AED=0.23;_eAED=0.23;_QI=75|1|1|1|1|1|2|334|480 |
| chr1_1 | exon | 61929030 | 61930554 | 61929030 | ID=Msa0034030-mRNA-1:exon:19432;Parent=Msa0034030-mRNA-1 |
| chr1_1 | exon | 61931400 | 61931726 | 61931400 | ID=Msa0034030-mRNA-1:exon:19431;Parent=Msa0034030-mRNA-1 |
| chr1_1 | five_prime_UTR | 61931652 | 61931726 | 61931652 | ID=Msa0034030-mRNA-1:five_prime_utr;Parent=Msa0034030-mRNA-1 |
| chr1_1 | CDS | 61931400 | 61931651 | 61931400 | ID=Msa0034030-mRNA-1:cds;Parent=Msa0034030-mRNA-1 |
| chr1_1 | CDS | 61929364 | 61930554 | 61929364 | ID=Msa0034030-mRNA-1:cds;Parent=Msa0034030-mRNA-1 |
| chr1_1 | three_prime_UTR | 61929030 | 61929363 | 61929030 | ID=Msa0034030-mRNA-1:three_prime_utr;Parent=Msa0034030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
