AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0127020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0127020 MtrunA17_Chr1g0185981 97.360 1288 34 0 1 1288 1 1288 0.0 2583
Msa0127020 MtrunA17_Chr1g0185991 86.022 1302 157 6 1 1288 1 1291 0.0 2249
Msa0127020 MtrunA17_Chr1g0173231 28.787 1129 737 23 10 1103 8 1104 4.08e-107 365
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0127020 AT2G34357.1 52.232 1277 572 16 16 1285 24 1269 0.0 1211
Msa0127020 AT4G23540.1 28.571 1078 690 25 14 1051 18 1055 2.32e-108 369

Find 270 sgRNAs with CRISPR-Local

Find 705 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTGTTCTTCTCCGCTTT+TGG 0.114005 1_3:-56240388 None:intergenic
TTTACTTTGTGCAGATATTT+TGG 0.170487 1_3:+56231340 Msa0127020:intron
ATCCTTTATACCATTGAATT+TGG 0.176595 1_3:+56232691 Msa0127020:CDS
ACCTCATCAAATGAGATTTC+TGG 0.183929 1_3:+56231129 Msa0127020:CDS
TGAGGTTCTGCTTGGGCTTA+TGG 0.208576 1_3:+56234934 Msa0127020:CDS
CAGATCTTTCAACAAGTTCT+TGG 0.242536 1_3:-56233257 None:intergenic
GGCCAATCTTGGTTTATTAA+AGG 0.244569 1_3:+56238716 Msa0127020:intron
TAGAAATTGCCTTGCCGTTC+AGG 0.255024 1_3:-56239779 None:intergenic
TGCCTATGATTGGACGTATT+AGG 0.272542 1_3:+56232810 Msa0127020:CDS
TCAAATGATAAAGATGATAT+TGG 0.273601 1_3:+56233151 Msa0127020:CDS
TCCGCAATGTTTCACAAATT+AGG 0.275204 1_3:+56231584 Msa0127020:CDS
ATTTATCTGTGTCAAATATA+TGG 0.275809 1_3:+56232723 Msa0127020:CDS
ATAAAGGATAAGAAAGTTTC+AGG 0.277939 1_3:-56232677 None:intergenic
ATTAACCAAGACTTGTTCTT+TGG 0.291284 1_3:-56233185 None:intergenic
GCCTATGATTGGACGTATTA+GGG 0.297196 1_3:+56232811 Msa0127020:CDS
CAATCCTTCTGCTTGTGATT+TGG 0.298079 1_3:-56238748 None:intergenic
CATATTATTCCACGAATATC+AGG 0.314917 1_3:-56233082 None:intergenic
CTGAAGGACGTTTGATTATC+CGG 0.320522 1_3:+56240267 Msa0127020:CDS
TGATGAGAGTTTGATTAAAC+AGG 0.320857 1_3:+56231430 Msa0127020:CDS
GTGTATTTATTTGATGATAA+AGG 0.321403 1_3:+56240727 Msa0127020:three_prime_UTR
TGCATCTGTGACTGCGAATA+TGG 0.321404 1_3:-56231381 None:intergenic
AATCAGCAGCATCGTCATTC+AGG 0.322268 1_3:+56239829 Msa0127020:CDS
TTTCGCATTTGTTGATTCAT+AGG 0.325836 1_3:+56229998 Msa0127020:CDS
AGCTTGAACCTTATGCATAT+TGG 0.332365 1_3:+56240492 Msa0127020:CDS
AGTATTAAAGCCAGCATTGC+AGG 0.334576 1_3:+56234524 Msa0127020:CDS
CTGTGGTAAATATGACAAAA+AGG 0.345210 1_3:+56240582 Msa0127020:CDS
AACCTTTAATAAACCAAGAT+TGG 0.349531 1_3:-56238718 None:intergenic
TCGGAGAGTATCGTTGTTGA+TGG 0.352716 1_3:+56229964 Msa0127020:CDS
TTCCAAATTCAATGGTATAA+AGG 0.353034 1_3:-56232693 None:intergenic
TCTTCCCCAGTCGCATATTT+CGG 0.358176 1_3:+56229757 Msa0127020:CDS
TGAGGTGTTGTGCACATTAT+CGG 0.358806 1_3:+56231098 Msa0127020:CDS
GTCGAAGTCGCCCATGCATT+TGG 0.359151 1_3:+56238276 Msa0127020:CDS
TTCAATTCCATTTCCGATCA+TGG 0.359263 1_3:+56229573 Msa0127020:exon
TTCTCCGTCGTCGAAGAATT+CGG 0.360523 1_3:+56229945 Msa0127020:CDS
ATGACGTGGTCAGGTGGATT+AGG 0.364631 1_3:-56229817 None:intergenic
TTCTCCGTGTAGGCCAATCT+TGG 0.365341 1_3:+56238705 Msa0127020:intron
AGTTAGACCTGTTTCCTAAA+GGG 0.366515 1_3:-56231992 None:intergenic
ATTCCTTCCATGATCGGAAA+TGG 0.367716 1_3:-56229580 None:intergenic
ACGCACTTGCTTACTCTTTG+TGG 0.368574 1_3:+56232966 Msa0127020:CDS
GGTAAGAAGGCAATCCCATT+TGG 0.370830 1_3:+56230741 Msa0127020:intron
AGTAAAGGCAATCAAGTCTA+TGG 0.372158 1_3:-56234991 None:intergenic
CAAAATGCCAACAGAATAGA+TGG 0.394116 1_3:+56234221 Msa0127020:CDS
CTCTAGCTCCCACGGCGGCA+AGG 0.395446 1_3:-56229529 None:intergenic
CTTGCAGACAAATGACTATC+AGG 0.396859 1_3:-56240350 None:intergenic
ATTATCACTATGCTGCTGCC+TGG 0.397194 1_3:+56231540 Msa0127020:CDS
GAACAGGGCTTATGACATTC+TGG 0.398126 1_3:+56238254 Msa0127020:CDS
CCTAGTCACTAGGCGCATAA+TGG 0.399891 1_3:+56231017 Msa0127020:CDS
TACTTTGCAGCTTGAGAAGC+AGG 0.404455 1_3:+56232916 Msa0127020:intron
CTAATAAGAAAACCAGGAAC+AGG 0.405034 1_3:+56238238 Msa0127020:CDS
TAGGTTGCTCGCGGCCTTGT+TGG 0.405180 1_3:+56238457 Msa0127020:intron
AGCGATTCGATGACGTGGTC+AGG 0.405656 1_3:-56229826 None:intergenic
TTTCCTCACTGAGATAATAC+TGG 0.407293 1_3:+56235285 Msa0127020:CDS
AATGTCATAAGCCCTGTTCC+TGG 0.407903 1_3:-56238250 None:intergenic
CGAAGCTTGAGGTTCTGCTT+GGG 0.409869 1_3:+56234927 Msa0127020:CDS
CAAATGATAAAGATGATATT+GGG 0.410170 1_3:+56233152 Msa0127020:CDS
AGACATCACGGAGGCCCAAA+TGG 0.410616 1_3:-56230756 None:intergenic
GGATCAGCCCTTGTTGCAAT+GGG 0.414422 1_3:+56232653 Msa0127020:CDS
CTTGGTTAATTACTCGCAAC+AGG 0.414607 1_3:+56233198 Msa0127020:CDS
TCGAAGCTTGAGGTTCTGCT+TGG 0.418257 1_3:+56234926 Msa0127020:CDS
AGATGATGGTGGTTGTTTGC+AGG 0.419096 1_3:+56233306 Msa0127020:CDS
CGTCAAAGGTTTAGCTCGCT+TGG 0.420509 1_3:+56238507 Msa0127020:CDS
GCAGAGGTGTTGGTGGTTAA+CGG 0.421525 1_3:-56229686 None:intergenic
ATCTCAGTGAGGAAAACTTC+TGG 0.421709 1_3:-56235277 None:intergenic
CTCCAACAAACCTGCAATGC+TGG 0.421914 1_3:-56234534 None:intergenic
GGAGCTAGAGCTAGCTAGCC+AGG 0.430497 1_3:+56229542 Msa0127020:five_prime_UTR
CTAAAGGGAAAATCTTCATC+AGG 0.430536 1_3:-56231977 None:intergenic
CAGAGCCTGGTAGGGCTGGT+AGG 0.435386 1_3:+56240408 Msa0127020:CDS
TGGATCAGCCCTTGTTGCAA+TGG 0.440463 1_3:+56232652 Msa0127020:CDS
AGAGCCTGGTAGGGCTGGTA+GGG 0.440903 1_3:+56240409 Msa0127020:CDS
CAAAGGTAGGCATTCTTTCA+AGG 0.441898 1_3:-56230929 None:intergenic
AGATGATATTGGGCAAGATA+TGG 0.443019 1_3:+56233162 Msa0127020:CDS
AGGAACTAAGGGAGCCCAAC+AGG 0.447331 1_3:+56230888 Msa0127020:CDS
TGCTTGATCGGCAGAAAGTA+AGG 0.447864 1_3:+56240177 Msa0127020:CDS
TCTAGCTCCCACGGCGGCAA+GGG 0.450775 1_3:-56229528 None:intergenic
ACTGCTCGCTTGCTTGATGC+TGG 0.451373 1_3:+56231168 Msa0127020:CDS
AACAGAAAATTTGAGGGCAT+TGG 0.453453 1_3:+56233225 Msa0127020:CDS
CCATTATGCGCCTAGTGACT+AGG 0.453764 1_3:-56231017 None:intergenic
ATTTGATGATAAAGGAAAGC+AGG 0.455540 1_3:+56240735 Msa0127020:three_prime_UTR
TCGAGCAGGACAAATGTAGA+TGG 0.455711 1_3:-56238574 None:intergenic
GTAAGAAGGCAATCCCATTT+GGG 0.457342 1_3:+56230742 Msa0127020:CDS
GCAATCAAGTCTATGGCGTT+TGG 0.458967 1_3:-56234984 None:intergenic
CCGTCTGTTCCCTTTCCTCC+CGG 0.460840 1_3:-56240286 None:intergenic
TCTTCAGCTTCCAAATTCAA+TGG 0.460919 1_3:-56232701 None:intergenic
AAGCTGGTGGAGATATTAAG+AGG 0.462137 1_3:+56240462 Msa0127020:CDS
CTTGAAGGCAAGAGTGCCTC+TGG 0.463007 1_3:+56240605 Msa0127020:CDS
GTGTTGGTGGTTAACGGCGG+TGG 0.463079 1_3:-56229680 None:intergenic
CTGGGGAAGAAGGGAGGTTG+TGG 0.464578 1_3:-56229744 None:intergenic
TCCCTAATACGTCCAATCAT+AGG 0.465765 1_3:-56232812 None:intergenic
ACGGTTGCACTTATCATATG+TGG 0.468050 1_3:-56238487 None:intergenic
TGAATTGCATATGTCATCGT+TGG 0.468163 1_3:-56229635 None:intergenic
TTCCGGTACGATGCGGTTCA+AGG 0.471050 1_3:-56229794 None:intergenic
ACAGCAGAGCCTGGTAGGGC+TGG 0.471151 1_3:+56240404 Msa0127020:CDS
ATGAATCTCAATCAGTTCTC+AGG 0.474206 1_3:+56234279 Msa0127020:CDS
ATACCTTTGATTTCGAGTCT+TGG 0.476758 1_3:-56235078 None:intergenic
TTCATAGGGATAGTGTTCAT+TGG 0.476869 1_3:+56230013 Msa0127020:CDS
ATTTCGATTCCTTCCATGAT+CGG 0.478506 1_3:-56229586 None:intergenic
AGTATACCTCTCATAAAGTA+AGG 0.479237 1_3:-56231926 None:intergenic
CTGGATGAATCAAGGAGATC+AGG 0.479568 1_3:+56231470 Msa0127020:CDS
TAGACAAAACAAGAACATAA+AGG 0.479604 1_3:+56233126 Msa0127020:CDS
AAATATGCGACTGGGGAAGA+AGG 0.485097 1_3:-56229754 None:intergenic
CATTATGCGCCTAGTGACTA+GGG 0.486726 1_3:-56231016 None:intergenic
AGACACAGCTAAAAGCTTCA+AGG 0.487391 1_3:+56233021 Msa0127020:CDS
AAAGAAGAACCTGATATTCG+TGG 0.488875 1_3:+56233073 Msa0127020:CDS
TGGTCAGGTGGATTAGGTTC+CGG 0.488914 1_3:-56229811 None:intergenic
CCTAGCATCATATTCTGAAT+CGG 0.488966 1_3:-56240321 None:intergenic
TGAAGGACGTTTGATTATCC+GGG 0.489005 1_3:+56240268 Msa0127020:CDS
TCTCCTCGTCTCCAAATGCA+TGG 0.489991 1_3:-56238287 None:intergenic
TAGTTAGACCTGTTTCCTAA+AGG 0.491566 1_3:-56231993 None:intergenic
CTTGGACTGTTAAGAAGTAA+AGG 0.492219 1_3:-56235060 None:intergenic
CATCTCATCATCGTCTGACC+TGG 0.494658 1_3:-56240234 None:intergenic
TTCGCATTTGTTGATTCATA+GGG 0.495983 1_3:+56229999 Msa0127020:CDS
AGTCATTTGTCTGCAAGGTC+CGG 0.497944 1_3:+56240356 Msa0127020:CDS
TCTATAAACCCTTGCCGCCG+TGG 0.498802 1_3:+56229520 Msa0127020:five_prime_UTR
AGGTTGCAACAGAAAATTTG+AGG 0.498991 1_3:+56233218 Msa0127020:CDS
TCCTTCTTCAACACAGCTAC+GGG 0.499484 1_3:-56229883 None:intergenic
CAAGCGAGCTAAACCTTTGA+CGG 0.500697 1_3:-56238506 None:intergenic
AAATGCTGGTGAAGGAACTA+AGG 0.500927 1_3:+56230876 Msa0127020:CDS
TATTAGGGAGAAGGCTCAAA+AGG 0.501198 1_3:+56232826 Msa0127020:CDS
GAGTCGTCGGCCACAACATA+GGG 0.502468 1_3:+56240535 Msa0127020:CDS
CGGAGAAGAACAGCAGAGCC+TGG 0.503610 1_3:+56240395 Msa0127020:CDS
TTTGATTATCCGGGAGGAAA+GGG 0.504061 1_3:+56240277 Msa0127020:CDS
AGTGAGGAAAACTTCTGGCC+AGG 0.505041 1_3:-56235272 None:intergenic
GTTTGATTATCCGGGAGGAA+AGG 0.505910 1_3:+56240276 Msa0127020:CDS
CTCCTTGAACCGCATCGTAC+CGG 0.508711 1_3:+56229792 Msa0127020:CDS
ATGATAAGTGCAACCGTCAA+AGG 0.509071 1_3:+56238493 Msa0127020:CDS
GAGTTTGATTAAACAGGGAG+TGG 0.510391 1_3:+56231436 Msa0127020:CDS
CTCCTTCTTCAACACAGCTA+CGG 0.511006 1_3:-56229884 None:intergenic
TTGGATTCGTTGTTGAATGT+TGG 0.511127 1_3:-56229616 None:intergenic
GATCATGGAAGGAATCGAAA+TGG 0.513498 1_3:+56229588 Msa0127020:exon
GAAGAACAGCAGAGCCTGGT+AGG 0.515608 1_3:+56240399 Msa0127020:CDS
GAAGGATAGTTACAAAATGA+AGG 0.516245 1_3:-56232998 None:intergenic
TTAGATCTGAGAATCTCAAA+AGG 0.517424 1_3:+56240207 Msa0127020:CDS
TGAGTCGTCGGCCACAACAT+AGG 0.517871 1_3:+56240534 Msa0127020:CDS
AGATCAAGGAGCGGAAAGAG+AGG 0.518453 1_3:+56239134 Msa0127020:intron
GCTTATCACGAAGTGTGGAT+TGG 0.518922 1_3:+56238980 Msa0127020:CDS
GCATCATATTCTGAATCGGC+TGG 0.519730 1_3:-56240317 None:intergenic
GATCATTATTTGCAGGATGT+TGG 0.519934 1_3:+56234627 Msa0127020:intron
AGTTCTTACAACAGGTAAGA+AGG 0.519955 1_3:+56230728 Msa0127020:intron
CAATAACGCAGTCTTGAAGC+TGG 0.520527 1_3:-56240825 None:intergenic
CTGAAATCTACAAAAGATGA+TGG 0.520706 1_3:+56233292 Msa0127020:CDS
TCAAGTGGCCAATATGCATA+AGG 0.523498 1_3:-56240500 None:intergenic
TGGTGGAGATATTAAGAGGA+AGG 0.524645 1_3:+56240466 Msa0127020:CDS
CTGCCGACAGGATGATTCAA+TGG 0.525113 1_3:+56235249 Msa0127020:intron
TTCAGGTCCCATTGCAACAA+GGG 0.527489 1_3:-56232660 None:intergenic
CAACACCTCTGCACCGTCAT+CGG 0.530998 1_3:+56229697 Msa0127020:CDS
AAGTTCTCTCGATCATACTC+AGG 0.531090 1_3:+56234673 Msa0127020:CDS
GTGCAGCTTCATACGTGCCT+TGG 0.531128 1_3:+56232632 Msa0127020:intron
GCCCGTAGCTGTGTTGAAGA+AGG 0.531646 1_3:+56229882 Msa0127020:CDS
AGCCACTTGATTTGCTTGAT+CGG 0.532416 1_3:+56240165 Msa0127020:CDS
GACATCACGGAGGCCCAAAT+GGG 0.532838 1_3:-56230755 None:intergenic
GATAATACTGGCTCTTAAAG+AGG 0.532942 1_3:+56235297 Msa0127020:CDS
CTATAAACCCTTGCCGCCGT+GGG 0.534662 1_3:+56229521 Msa0127020:five_prime_UTR
GTCTGAACCATCTATTCTGT+TGG 0.538070 1_3:-56234228 None:intergenic
CGTCATCGGCGCAATGTCAC+AGG 0.538926 1_3:+56229711 Msa0127020:CDS
TATGGCCAAAGAACAAGTCT+TGG 0.539050 1_3:+56233180 Msa0127020:CDS
AGCAAGGTCAGAGAATTCAT+AGG 0.539362 1_3:-56238530 None:intergenic
CTCTCCGAATTCTTCGACGA+CGG 0.540604 1_3:-56229949 None:intergenic
CAAGAACATACAAAACCTGT+TGG 0.540635 1_3:-56230903 None:intergenic
AGATAACTCTGGATGAATCA+AGG 0.542333 1_3:+56231462 Msa0127020:CDS
TGTTGGTGTCATGCAGAAGA+AGG 0.543631 1_3:+56234644 Msa0127020:CDS
GTTGCGCCGAAATATGCGAC+TGG 0.543868 1_3:-56229763 None:intergenic
GACAGGATGATTCAATGGCC+TGG 0.544833 1_3:+56235254 Msa0127020:intron
AGAATCTCAAAAGGAAGTCC+AGG 0.546874 1_3:+56240216 Msa0127020:CDS
GGGATGCTTATCACGAAGTG+TGG 0.547145 1_3:+56238975 Msa0127020:CDS
ATTCCATTTCCGATCATGGA+AGG 0.548811 1_3:+56229577 Msa0127020:exon
TTATCACTATGCTGCTGCCT+GGG 0.549257 1_3:+56231541 Msa0127020:CDS
CACCTCAAGTAGTGCTTCAG+AGG 0.550298 1_3:-56231082 None:intergenic
GGTTGCAACAGAAAATTTGA+GGG 0.550727 1_3:+56233219 Msa0127020:CDS
TTTGCAGCAGCCCTATGTTG+TGG 0.551398 1_3:-56240545 None:intergenic
TCTTACTGATTCAAGACCGA+AGG 0.552941 1_3:+56230074 Msa0127020:CDS
GATTCGTCAGACAAGTGCTC+AGG 0.554011 1_3:-56240134 None:intergenic
TCAACTAACCTTGCGTATGT+TGG 0.557578 1_3:-56239048 None:intergenic
TTTCAAAAGCAACTACATCC+AGG 0.559469 1_3:+56239194 Msa0127020:CDS
CTGATAGTCATTTGTCTGCA+AGG 0.559535 1_3:+56240351 Msa0127020:CDS
CGCCCATGCATTTGGAGACG+AGG 0.560462 1_3:+56238284 Msa0127020:CDS
CTGTGACATTGCGCCGATGA+CGG 0.561333 1_3:-56229710 None:intergenic
TCAAATGAGATTTCTGGAGA+TGG 0.561668 1_3:+56231135 Msa0127020:CDS
CGATGACGGTGCAGAGGTGT+TGG 0.562762 1_3:-56229696 None:intergenic
TGGTTGAGTGTTTGTTTCAG+TGG 0.562799 1_3:+56238790 Msa0127020:CDS
CTCCTCGTCTCCAAATGCAT+GGG 0.565443 1_3:-56238286 None:intergenic
GCATTTGGAGACGAGGAGAA+AGG 0.567246 1_3:+56238291 Msa0127020:CDS
AAGAACATACAAAACCTGTT+GGG 0.567767 1_3:-56230902 None:intergenic
CAGGTCAGACGATGATGAGA+TGG 0.570043 1_3:+56240235 Msa0127020:CDS
AGGGACTGACAGTGTCATCA+AGG 0.571222 1_3:+56232936 Msa0127020:CDS
GATTGGACGTATTAGGGAGA+AGG 0.572003 1_3:+56232817 Msa0127020:CDS
TATGGCGTTTGGCAGAAGAA+TGG 0.572032 1_3:-56234973 None:intergenic
AATATGCGACTGGGGAAGAA+GGG 0.573040 1_3:-56229753 None:intergenic
TTTGGCATCTGAACATGAAG+AGG 0.575489 1_3:+56231358 Msa0127020:CDS
TATCACGAAGTGTGGATTGG+AGG 0.576082 1_3:+56238983 Msa0127020:CDS
GAACTCAACTTTGACTGCCT+CGG 0.577235 1_3:-56235038 None:intergenic
GGGAGTGGATCAGATAACTC+TGG 0.577650 1_3:+56231451 Msa0127020:CDS
CCGATTCAGAATATGATGCT+AGG 0.582895 1_3:+56240321 Msa0127020:CDS
CTAGCTAGCTCTAGCTCCCA+CGG 0.583705 1_3:-56229537 None:intergenic
TAAGCCCTACCAGCCCTACC+AGG 0.584920 1_3:-56240413 None:intergenic
TGCGTCAACCCCTAGTCACT+AGG 0.585009 1_3:+56231007 Msa0127020:CDS
AACTCTCCTTACTTTATGAG+AGG 0.585087 1_3:+56231920 Msa0127020:CDS
TACAGGCTAATAAGAAAACC+AGG 0.585447 1_3:+56238232 Msa0127020:intron
ACCTAATTTGTGAAACATTG+CGG 0.586553 1_3:-56231585 None:intergenic
GTAGCCAAATCACAAGCAGA+AGG 0.588275 1_3:+56238744 Msa0127020:CDS
AAGAACAGCAGAGCCTGGTA+GGG 0.589719 1_3:+56240400 Msa0127020:CDS
TTTCAGGTCCCATTGCAACA+AGG 0.591569 1_3:-56232661 None:intergenic
TTTGAGATCACTGAAAACAC+TGG 0.591847 1_3:-56231241 None:intergenic
GATTCGATGACGTGGTCAGG+TGG 0.592836 1_3:-56229823 None:intergenic
TTTGGAGACGAGGAGAAAGG+TGG 0.594862 1_3:+56238294 Msa0127020:CDS
TTGCGCCGAAATATGCGACT+GGG 0.595787 1_3:-56229762 None:intergenic
CTATTAGCATCTGCGAGTGA+AGG 0.596295 1_3:+56230802 Msa0127020:CDS
AATCAAAAGCAGTTAAAGCA+AGG 0.596980 1_3:-56238546 None:intergenic
TTGCAACAAGGGCTGATCCA+AGG 0.597962 1_3:-56232649 None:intergenic
TGACGGTGCAGAGGTGTTGG+TGG 0.598610 1_3:-56229693 None:intergenic
CTGCCTCGGACTTCATGACA+TGG 0.599170 1_3:-56235024 None:intergenic
ACTTTGCAGCTTGAGAAGCA+GGG 0.599256 1_3:+56232917 Msa0127020:intron
TTCGCAGTTTCATTGTTGCG+TGG 0.600713 1_3:+56234468 Msa0127020:CDS
TTGGAGACGAGGAGAAAGGT+GGG 0.601042 1_3:+56238295 Msa0127020:CDS
AATCATAGGCAAAATTTCGT+CGG 0.602575 1_3:-56232798 None:intergenic
GAAAGTTTATCAAGACATCA+CGG 0.603730 1_3:-56230768 None:intergenic
GAGTTTGATGGAGACAGCAA+AGG 0.604231 1_3:+56239741 Msa0127020:CDS
CCGGGAGGAAAGGGAACAGA+CGG 0.606596 1_3:+56240286 Msa0127020:CDS
AACGGCAAGGCAATTTCTAG+AGG 0.609750 1_3:+56239783 Msa0127020:CDS
TGGTAGGGCTTACACTGGAA+AGG 0.611286 1_3:+56240424 Msa0127020:CDS
GGTGGAGCAAATGCAAATGC+TGG 0.613071 1_3:+56230862 Msa0127020:CDS
GATGAGAGTTTGATTAAACA+GGG 0.613401 1_3:+56231431 Msa0127020:CDS
AGTCCAAGACTCGAAATCAA+AGG 0.613427 1_3:+56235075 Msa0127020:CDS
AATAACGCAGTCTTGAAGCT+GGG 0.613618 1_3:-56240824 None:intergenic
TTCCTCTGAAGCACTACTTG+AGG 0.615882 1_3:+56231080 Msa0127020:CDS
ACGGCAAGGCAATTTCTAGA+GGG 0.621924 1_3:+56239784 Msa0127020:CDS
GTAGCAGATTGATAGAGCCA+TGG 0.622425 1_3:+56240694 Msa0127020:three_prime_UTR
TGCCGATCAAGCAAATCAAG+TGG 0.625596 1_3:-56240167 None:intergenic
TTGCGCCGATGACGGTGCAG+AGG 0.626574 1_3:-56229702 None:intergenic
GAGCGGAAAGAGAGGAACCG+AGG 0.627235 1_3:+56239142 Msa0127020:CDS
TGCTGCTGATTTGAGATGTG+TGG 0.628832 1_3:-56239817 None:intergenic
GATTAGGTTCCGGTACGATG+CGG 0.630939 1_3:-56229801 None:intergenic
GGCAAGGCAATTTCTAGAGG+GGG 0.631149 1_3:+56239786 Msa0127020:CDS
AATGCTGGTGAAGGAACTAA+GGG 0.631940 1_3:+56230877 Msa0127020:CDS
TAATAAGAAAACCAGGAACA+GGG 0.632518 1_3:+56238239 Msa0127020:CDS
TCCAGAAATCTCATTTGATG+AGG 0.632522 1_3:-56231130 None:intergenic
GTCAGACGATGATGAGATGG+AGG 0.633184 1_3:+56240238 Msa0127020:CDS
TTGAGATCACTGAAAACACT+GGG 0.634526 1_3:-56231240 None:intergenic
GCAAATGCAAATGCTGGTGA+AGG 0.636144 1_3:+56230868 Msa0127020:CDS
GGAGGAAAGGGAACAGACGG+AGG 0.636748 1_3:+56240289 Msa0127020:CDS
GTGCTAAATCTGAAGAAACC+AGG 0.641226 1_3:+56239164 Msa0127020:CDS
ACTTCTGACCAACATACGCA+AGG 0.645110 1_3:+56239040 Msa0127020:CDS
CGGCAAGGCAATTTCTAGAG+GGG 0.645153 1_3:+56239785 Msa0127020:CDS
GAGCTAGAGCTAGCTAGCCA+GGG 0.645388 1_3:+56229543 Msa0127020:five_prime_UTR
TGGAATTGAACAGTAAACCC+TGG 0.646580 1_3:-56229560 None:intergenic
GAGATGGAGGTAGATTCTGA+AGG 0.647548 1_3:+56240251 Msa0127020:CDS
ATGCGACTGGGGAAGAAGGG+AGG 0.648895 1_3:-56229750 None:intergenic
TTTCTTCAGATTTAGCACCT+CGG 0.650186 1_3:-56239159 None:intergenic
AGTTCTCTCGATCATACTCA+GGG 0.654484 1_3:+56234674 Msa0127020:CDS
AGGGCTGGTAGGGCTTACAC+TGG 0.665086 1_3:+56240419 Msa0127020:CDS
AATACACTTACAGTAAACCA+TGG 0.666124 1_3:-56240711 None:intergenic
TTGTGAGCTTAGGTTGCTCG+CGG 0.669687 1_3:+56238448 Msa0127020:intron
TGCAGAATACCTGAACGGCA+AGG 0.670993 1_3:+56239770 Msa0127020:CDS
CCGGAACTAAAGCCCAAAAG+CGG 0.676318 1_3:+56240375 Msa0127020:CDS
TTGTAAAACAGATCAAGGAG+CGG 0.680605 1_3:+56239125 Msa0127020:intron
AGGACGTTTGATTATCCGGG+AGG 0.685208 1_3:+56240271 Msa0127020:CDS
AGTGATGCAGAATACCTGAA+CGG 0.696328 1_3:+56239765 Msa0127020:CDS
AAATCTACAAAAGATGATGG+TGG 0.698268 1_3:+56233295 Msa0127020:CDS
CGGTACGATGCGGTTCAAGG+AGG 0.699527 1_3:-56229791 None:intergenic
CTTCATAGAAAGCACGCCAG+AGG 0.701114 1_3:-56240621 None:intergenic
TTAAAAGCGATTCGATGACG+TGG 0.701711 1_3:-56229831 None:intergenic
ACTCCATGTCATGAAGTCCG+AGG 0.707627 1_3:+56235021 Msa0127020:CDS
ATTATGCGCCTAGTGACTAG+GGG 0.709999 1_3:-56231015 None:intergenic
AAAGAATAAAGAGATAACCA+AGG 0.711747 1_3:+56238600 Msa0127020:CDS
TGCGCCGAAATATGCGACTG+GGG 0.717004 1_3:-56229761 None:intergenic
GAGGTGTTGGTGGTTAACGG+CGG 0.724078 1_3:-56229683 None:intergenic
GCAAATGCATCTGAAGAGCG+TGG 0.729213 1_3:+56238770 Msa0127020:CDS
CGTTTGGCAGAAGAATGGCA+AGG 0.732352 1_3:-56234968 None:intergenic
GAGCCAGTATTATCTCAGTG+AGG 0.735723 1_3:-56235288 None:intergenic
GCTAGCTCTAGCTCCCACGG+CGG 0.779006 1_3:-56229534 None:intergenic
AGTTTATCAAGACATCACGG+AGG 0.840719 1_3:-56230765 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAATATTAAAAATT+GGG - chr1_3:56237531-56237550 None:intergenic 0.0%
!! AAAATAAAAATATTAAAAAT+TGG - chr1_3:56237532-56237551 None:intergenic 0.0%
!!! ATTTTAAATTTTAAATGTTG+TGG + chr1_3:56230616-56230635 Msa0127020:intron 10.0%
!!! TTATAATTTATATAGTTTGT+TGG + chr1_3:56231651-56231670 Msa0127020:intron 10.0%
!!! AATTATCTTATTTGATTTTT+CGG + chr1_3:56234392-56234411 Msa0127020:intron 10.0%
!!! CTAATTTTCAATATTATTAA+GGG - chr1_3:56237336-56237355 None:intergenic 10.0%
!!! ACTAATTTTCAATATTATTA+AGG - chr1_3:56237337-56237356 None:intergenic 10.0%
!! TGTTAAAAATATGAATAAAT+AGG - chr1_3:56238917-56238936 None:intergenic 10.0%
!!! GTTTTCAATTGTTATTTATA+AGG + chr1_3:56230444-56230463 Msa0127020:intron 15.0%
!!! TTGATTTGTTTTCTAAATTA+TGG + chr1_3:56230678-56230697 Msa0127020:intron 15.0%
!!! TATTTACCTGTTTTTTTTTT+TGG + chr1_3:56231296-56231315 Msa0127020:intron 15.0%
!! AAAAAATCTAACAGAAAAAA+CGG - chr1_3:56231748-56231767 None:intergenic 15.0%
!! TCATATCATACATATTAAAA+TGG + chr1_3:56232268-56232287 Msa0127020:intron 15.0%
!! CATATCATACATATTAAAAT+GGG + chr1_3:56232269-56232288 Msa0127020:intron 15.0%
!! ATTTCTATATTCATAATTGA+AGG - chr1_3:56233894-56233913 None:intergenic 15.0%
!! ATAGAAATAGAAGTTATATA+TGG + chr1_3:56233906-56233925 Msa0127020:intron 15.0%
!! AAAATCAAATAAGATAATTC+AGG - chr1_3:56234391-56234410 None:intergenic 15.0%
!! AATAAGAAAAATCAAATAGT+AGG - chr1_3:56234713-56234732 None:intergenic 15.0%
!!! TTAAATGAAATTTTCATGTT+GGG - chr1_3:56235697-56235716 None:intergenic 15.0%
!!! TTTAAATGAAATTTTCATGT+TGG - chr1_3:56235698-56235717 None:intergenic 15.0%
!! ACTTCAATTAAATCATAAAA+TGG + chr1_3:56235752-56235771 Msa0127020:intron 15.0%
!! AAATAATCGAATAATTAAGA+CGG + chr1_3:56237734-56237753 Msa0127020:intron 15.0%
!!! GTATTTAGTTTTTAAGTAAT+AGG + chr1_3:56238018-56238037 Msa0127020:intron 15.0%
!!! ATTTGATTTTAGTTATTATG+TGG + chr1_3:56238102-56238121 Msa0127020:intron 15.0%
!!! TTTGATTTTAGTTATTATGT+GGG + chr1_3:56238103-56238122 Msa0127020:intron 15.0%
!!! AATTTTGAAGTTATTTTTAC+AGG + chr1_3:56238215-56238234 Msa0127020:intron 15.0%
!! AATATTTAATTAATAGCTCA+AGG - chr1_3:56238681-56238700 None:intergenic 15.0%
!! AAAAATATGAATAAATAGGT+TGG - chr1_3:56238913-56238932 None:intergenic 15.0%
!!! ATTTTGATAATTCTTTTATG+TGG + chr1_3:56239076-56239095 Msa0127020:intron 15.0%
!! AATTAGCATATATATTTGAA+AGG - chr1_3:56239321-56239340 None:intergenic 15.0%
!!! ATATATTAGTTCTATGATTA+GGG + chr1_3:56239563-56239582 Msa0127020:intron 15.0%
!! TTATTTGATATTGCATAAAT+TGG + chr1_3:56239965-56239984 Msa0127020:intron 15.0%
!! AATCAACAAAAAAAAAAACG+AGG - chr1_3:56230121-56230140 None:intergenic 20.0%
!! AAATGTTTGTAATAACTTGA+TGG + chr1_3:56230183-56230202 Msa0127020:intron 20.0%
!!! CACAATTTTTTTCAATGAAA+AGG + chr1_3:56230416-56230435 Msa0127020:intron 20.0%
!! AAAAATCTAACAGAAAAAAC+GGG - chr1_3:56231747-56231766 None:intergenic 20.0%
!! TGAAATTATGTGAAATTGTA+AGG - chr1_3:56231828-56231847 None:intergenic 20.0%
!!! ATTTTACACTGTATTATTTG+AGG - chr1_3:56231853-56231872 None:intergenic 20.0%
!! TAGATACTGTTCATATAATT+GGG - chr1_3:56232122-56232141 None:intergenic 20.0%
!! TTAGATACTGTTCATATAAT+TGG - chr1_3:56232123-56232142 None:intergenic 20.0%
!!! ATTGAATTTCTATTGATTCA+TGG + chr1_3:56232435-56232454 Msa0127020:intron 20.0%
!!! TTGAATTTCTATTGATTCAT+GGG + chr1_3:56232436-56232455 Msa0127020:intron 20.0%
!!! ATTGAATTTCTATTGATTCA+TGG + chr1_3:56232435-56232454 Msa0127020:intron 20.0%
!!! TTGAATTTCTATTGATTCAT+GGG + chr1_3:56232436-56232455 Msa0127020:intron 20.0%
!! ATTTATCTGTGTCAAATATA+TGG + chr1_3:56232723-56232742 Msa0127020:CDS 20.0%
!!! ACAATATGCTGTTTTAAAAT+GGG - chr1_3:56232755-56232774 None:intergenic 20.0%
!!! AACAATATGCTGTTTTAAAA+TGG - chr1_3:56232756-56232775 None:intergenic 20.0%
!!! ATTTTAAAACAGCATATTGT+TGG + chr1_3:56232755-56232774 Msa0127020:CDS 20.0%
!! TCAAATGATAAAGATGATAT+TGG + chr1_3:56233151-56233170 Msa0127020:CDS 20.0%
!! CAAATGATAAAGATGATATT+GGG + chr1_3:56233152-56233171 Msa0127020:CDS 20.0%
!! TATAATAAAAGCTGAAACAT+GGG - chr1_3:56233514-56233533 None:intergenic 20.0%
!!! TATTTTAAAGACAATGATTC+AGG + chr1_3:56233605-56233624 Msa0127020:intron 20.0%
!!! ATTTTAAAGACAATGATTCA+GGG + chr1_3:56233606-56233625 Msa0127020:intron 20.0%
!! ATTGAAGTAAATATATGACA+AGG + chr1_3:56233761-56233780 Msa0127020:intron 20.0%
!! TTGAAGTAAATATATGACAA+GGG + chr1_3:56233762-56233781 Msa0127020:intron 20.0%
!! TCAGATTAATGAAGATATTT+CGG - chr1_3:56233951-56233970 None:intergenic 20.0%
!! TGAGGAATGAAATTAAAAAA+TGG - chr1_3:56234005-56234024 None:intergenic 20.0%
!!! ATGATTTTACTTCATTTACA+GGG + chr1_3:56234110-56234129 Msa0127020:intron 20.0%
!! TATTAAAATAAATGCTACGT+GGG - chr1_3:56235375-56235394 None:intergenic 20.0%
!! TTATTAAAATAAATGCTACG+TGG - chr1_3:56235376-56235395 None:intergenic 20.0%
!! AGTATACTTGTATATTTCTT+GGG + chr1_3:56235443-56235462 Msa0127020:intron 20.0%
!!! ACTTATGAGATTTTTCAATA+AGG - chr1_3:56235872-56235891 None:intergenic 20.0%
!!! TATTAAGGGTATAATTCTAT+AGG - chr1_3:56237322-56237341 None:intergenic 20.0%
!! GATTTATAACTGAATTATGA+GGG - chr1_3:56237628-56237647 None:intergenic 20.0%
!! TGATTTATAACTGAATTATG+AGG - chr1_3:56237629-56237648 None:intergenic 20.0%
!! TATGATTTATGAAGTTGAAT+GGG - chr1_3:56237657-56237676 None:intergenic 20.0%
!! TTATGATTTATGAAGTTGAA+TGG - chr1_3:56237658-56237677 None:intergenic 20.0%
!! AATAATCGAATAATTAAGAC+GGG + chr1_3:56237735-56237754 Msa0127020:intron 20.0%
!!! AGATATAACAATTTTACTCA+GGG - chr1_3:56237949-56237968 None:intergenic 20.0%
!!! AAGATATAACAATTTTACTC+AGG - chr1_3:56237950-56237969 None:intergenic 20.0%
!!! TTAGTTTTTAAGTAATAGGA+TGG + chr1_3:56238022-56238041 Msa0127020:intron 20.0%
!!! TAGTTTTTAAGTAATAGGAT+GGG + chr1_3:56238023-56238042 Msa0127020:intron 20.0%
!! AAAATAAAGATGAAAAAGCA+CGG - chr1_3:56238374-56238393 None:intergenic 20.0%
!!! TGTTTCATTTTCTATTTTGT+TGG + chr1_3:56238625-56238644 Msa0127020:intron 20.0%
!!! CTTTGCTTTAAAATGATTTT+TGG - chr1_3:56238826-56238845 None:intergenic 20.0%
!!! CAAAAATCATTTTAAAGCAA+AGG + chr1_3:56238824-56238843 Msa0127020:CDS 20.0%
!! TGAATAAAGGAAATAAATAC+AGG - chr1_3:56239227-56239246 None:intergenic 20.0%
!!! CATATATTAGTTCTATGATT+AGG + chr1_3:56239562-56239581 Msa0127020:intron 20.0%
!! ATATTGTGCTATAATGAATT+TGG + chr1_3:56239638-56239657 Msa0127020:intron 20.0%
!!! GTGTATTTATTTGATGATAA+AGG + chr1_3:56240727-56240746 Msa0127020:three_prime_UTR 20.0%
! AAAAATTGTGAGCAAAATGA+CGG - chr1_3:56230406-56230425 None:intergenic 25.0%
! TATATTGGAATGTTAAGAGA+TGG - chr1_3:56230506-56230525 None:intergenic 25.0%
! AATTATGGTATATACTTGAG+TGG + chr1_3:56230693-56230712 Msa0127020:intron 25.0%
! TAGTTGCCAAAAAAAAAAAC+AGG - chr1_3:56231305-56231324 None:intergenic 25.0%
!!! GTTTTTTTTTTTGGCAACTA+TGG + chr1_3:56231305-56231324 Msa0127020:intron 25.0%
!! TTTACTTTGTGCAGATATTT+TGG + chr1_3:56231340-56231359 Msa0127020:intron 25.0%
!! CAAATTTTCTCAATAATGGT+TGG - chr1_3:56231497-56231516 None:intergenic 25.0%
!! TGCACAAATTTTCTCAATAA+TGG - chr1_3:56231501-56231520 None:intergenic 25.0%
! AAAAATCTAACAGAAAAACC+GGG - chr1_3:56231805-56231824 None:intergenic 25.0%
! GAAAAATCTAACAGAAAAAC+CGG - chr1_3:56231806-56231825 None:intergenic 25.0%
!!! AAGACATTCTACTTTTTTAC+AGG - chr1_3:56232155-56232174 None:intergenic 25.0%
! TGATGATTTCAAAAGCAAAT+AGG + chr1_3:56232198-56232217 Msa0127020:intron 25.0%
! AACCAACTTGATTATGATAT+TGG - chr1_3:56232522-56232541 None:intergenic 25.0%
! ATAAAGGATAAGAAAGTTTC+AGG - chr1_3:56232680-56232699 None:intergenic 25.0%
! ATCCTTTATACCATTGAATT+TGG + chr1_3:56232691-56232710 Msa0127020:CDS 25.0%
! TTCCAAATTCAATGGTATAA+AGG - chr1_3:56232696-56232715 None:intergenic 25.0%
! TAGACAAAACAAGAACATAA+AGG + chr1_3:56233126-56233145 Msa0127020:CDS 25.0%
! GTATAATAAAAGCTGAAACA+TGG - chr1_3:56233515-56233534 None:intergenic 25.0%
!!! TTCACTCATGGTATTTTAAT+TGG + chr1_3:56233561-56233580 Msa0127020:intron 25.0%
! TGAAGTAAATATATGACAAG+GGG + chr1_3:56233763-56233782 Msa0127020:intron 25.0%
!!! ATGAAGTACTCTTTTTTACT+TGG + chr1_3:56234059-56234078 Msa0127020:intron 25.0%
! TACTTGGTTTCTTGATATAT+AGG + chr1_3:56234075-56234094 Msa0127020:intron 25.0%
!! GATGATTTTACTTCATTTAC+AGG + chr1_3:56234109-56234128 Msa0127020:intron 25.0%
!!! CATTTTGAGTACATTTTAAG+AGG - chr1_3:56234208-56234227 None:intergenic 25.0%
! TTCAAATAGAAAAGTTACGA+TGG + chr1_3:56234597-56234616 Msa0127020:intron 25.0%
! TTATTGTGATCATTATTTGC+AGG + chr1_3:56234620-56234639 Msa0127020:intron 25.0%
! TTGGTTAAAATGTTCAATCA+CGG + chr1_3:56234763-56234782 Msa0127020:intron 25.0%
!!! AAATCAAAGGTATCCAAAAT+TGG + chr1_3:56235088-56235107 Msa0127020:intron 25.0%
!!! AATCAAAGGTATCCAAAATT+GGG + chr1_3:56235089-56235108 Msa0127020:intron 25.0%
!! TTGAATCAGTGTATTTCTTT+TGG + chr1_3:56235396-56235415 Msa0127020:intron 25.0%
! CAGTATACTTGTATATTTCT+TGG + chr1_3:56235442-56235461 Msa0127020:intron 25.0%
!! AAATTTTCATGTTGGGAAAA+CGG - chr1_3:56235690-56235709 None:intergenic 25.0%
! TTTCATGATGTTGAATTTGA+AGG - chr1_3:56235792-56235811 None:intergenic 25.0%
! AAAATCTTAAACTATTGCAG+CGG + chr1_3:56235810-56235829 Msa0127020:intron 25.0%
! AGTTCAACATTTAAAAGTCT+TGG + chr1_3:56235838-56235857 Msa0127020:intron 25.0%
!! AGTTGTTAAATGCGTTTTAT+TGG - chr1_3:56236091-56236110 None:intergenic 25.0%
! TTTGTGATGAGAATTAGTAA+TGG - chr1_3:56236187-56236206 None:intergenic 25.0%
! AATGTGTTAACATTCACATA+AGG + chr1_3:56236672-56236691 Msa0127020:intron 25.0%
! GATGATAATTAGATGCTATT+TGG - chr1_3:56237167-56237186 None:intergenic 25.0%
! ATCATCTTAAGTCATATCTA+AGG + chr1_3:56237181-56237200 Msa0127020:intron 25.0%
!! AAACATAATACGTACGTTTT+TGG - chr1_3:56237437-56237456 None:intergenic 25.0%
! TAGTAGTGATAAGAGTAATT+AGG - chr1_3:56237487-56237506 None:intergenic 25.0%
! ATTCAAGGAGTAAATAAACT+CGG + chr1_3:56237811-56237830 Msa0127020:intron 25.0%
! CCTTGATAAAAAATTGATAG+AGG - chr1_3:56238332-56238351 None:intergenic 25.0%
!!! CCTCTATCAATTTTTTATCA+AGG + chr1_3:56238329-56238348 Msa0127020:CDS 25.0%
! AAATCAAATTACTGTTGGTA+TGG - chr1_3:56238419-56238438 None:intergenic 25.0%
! AAAGAATAAAGAGATAACCA+AGG + chr1_3:56238600-56238619 Msa0127020:CDS 25.0%
! ATAGAAAATGAAACAAACCT+TGG - chr1_3:56238620-56238639 None:intergenic 25.0%
! AACCTTTAATAAACCAAGAT+TGG - chr1_3:56238721-56238740 None:intergenic 25.0%
!!! TTTCATTGATTTGTTGAAGA+TGG + chr1_3:56238872-56238891 Msa0127020:intron 25.0%
!!! AGAAGTTTTATATGTTCTTC+AGG - chr1_3:56239026-56239045 None:intergenic 25.0%
!! GTTCTCTTCATTTTGAATAA+AGG - chr1_3:56239240-56239259 None:intergenic 25.0%
! TAAATTCAAAATCTCACAGA+GGG - chr1_3:56239280-56239299 None:intergenic 25.0%
! ATAAATTCAAAATCTCACAG+AGG - chr1_3:56239281-56239300 None:intergenic 25.0%
!!! GAACCATACTGATATTTTTT+CGG + chr1_3:56239719-56239738 Msa0127020:CDS 25.0%
!!! GTTAGTTGAAATTGATTTTC+AGG - chr1_3:56240062-56240081 None:intergenic 25.0%
!!! ATTGTTTTTTAGTCTCATCT+TGG - chr1_3:56240111-56240130 None:intergenic 25.0%
! CTAAAAAGAACTCAAAAGAA+AGG + chr1_3:56240653-56240672 Msa0127020:CDS 25.0%
!! TTTCGCATTTGTTGATTCAT+AGG + chr1_3:56229998-56230017 Msa0127020:CDS 30.0%
!! TTCGCATTTGTTGATTCATA+GGG + chr1_3:56229999-56230018 Msa0127020:CDS 30.0%
AATTCATGAATCGATACCTT+CGG - chr1_3:56230093-56230112 None:intergenic 30.0%
! ACTTGATGGTTACTATTGAT+TGG + chr1_3:56230197-56230216 Msa0127020:intron 30.0%
ACGTGTTTATTGCTCTATAT+TGG - chr1_3:56230521-56230540 None:intergenic 30.0%
!! TTTTAAATGTTGTGGACTGT+TGG + chr1_3:56230624-56230643 Msa0127020:intron 30.0%
! TTTAAATGTTGTGGACTGTT+GGG + chr1_3:56230625-56230644 Msa0127020:intron 30.0%
GAAAGTTTATCAAGACATCA+CGG - chr1_3:56230771-56230790 None:intergenic 30.0%
AAGAACATACAAAACCTGTT+GGG - chr1_3:56230905-56230924 None:intergenic 30.0%
! TTGTCTTTTAGTGACAACAA+AGG - chr1_3:56230949-56230968 None:intergenic 30.0%
!!! AGAAAGTTTTTTCTCTGAAC+AGG + chr1_3:56231196-56231215 Msa0127020:CDS 30.0%
TGATGAGAGTTTGATTAAAC+AGG + chr1_3:56231430-56231449 Msa0127020:CDS 30.0%
GATGAGAGTTTGATTAAACA+GGG + chr1_3:56231431-56231450 Msa0127020:CDS 30.0%
! ACCTAATTTGTGAAACATTG+CGG - chr1_3:56231588-56231607 None:intergenic 30.0%
ATTACTGCTATATTCAATGC+AGG + chr1_3:56231893-56231912 Msa0127020:intron 30.0%
AGTATACCTCTCATAAAGTA+AGG - chr1_3:56231929-56231948 None:intergenic 30.0%
!!! TTTTGAGTTTCGTATTTGTG+TGG - chr1_3:56232051-56232070 None:intergenic 30.0%
TTGTCACAGAATAACTAACA+GGG - chr1_3:56232237-56232256 None:intergenic 30.0%
TTTGTCACAGAATAACTAAC+AGG - chr1_3:56232238-56232257 None:intergenic 30.0%
TTGATTCATGGGAATTTGAA+TGG + chr1_3:56232476-56232495 Msa0127020:intron 30.0%
!!! TGGTTTCCTGGTATTTTTTT+TGG + chr1_3:56232496-56232515 Msa0127020:intron 30.0%
TATTGGCCAAAAAAAATACC+AGG - chr1_3:56232505-56232524 None:intergenic 30.0%
!!! ATCAAGTTGGTTTTTGTTAG+AGG + chr1_3:56232530-56232549 Msa0127020:intron 30.0%
AATCATAGGCAAAATTTCGT+CGG - chr1_3:56232801-56232820 None:intergenic 30.0%
GAAGGATAGTTACAAAATGA+AGG - chr1_3:56233001-56233020 None:intergenic 30.0%
CATATTATTCCACGAATATC+AGG - chr1_3:56233085-56233104 None:intergenic 30.0%
! ATTAACCAAGACTTGTTCTT+TGG - chr1_3:56233188-56233207 None:intergenic 30.0%
! CATCATCTTTTGTAGATTTC+AGG - chr1_3:56233294-56233313 None:intergenic 30.0%
CTGAAATCTACAAAAGATGA+TGG + chr1_3:56233292-56233311 Msa0127020:CDS 30.0%
! AAATCTACAAAAGATGATGG+TGG + chr1_3:56233295-56233314 Msa0127020:CDS 30.0%
ATGTTGGCATAACATAAAAC+TGG + chr1_3:56233403-56233422 Msa0127020:intron 30.0%
!!! CATGGTATTTTAATTGGTTG+AGG + chr1_3:56233567-56233586 Msa0127020:intron 30.0%
ATATTCATAATTGAAGGACG+TGG - chr1_3:56233888-56233907 None:intergenic 30.0%
!!! GATTGATTTTTTCGTGAAGT+TGG + chr1_3:56234336-56234355 Msa0127020:intron 30.0%
! ATAGAATTTCTTTTCATCCC+AGG + chr1_3:56234430-56234449 Msa0127020:intron 30.0%
! TAGAATTTCTTTTCATCCCA+GGG + chr1_3:56234431-56234450 Msa0127020:intron 30.0%
AATTTCAGTAATTCCTTGCA+AGG - chr1_3:56234572-56234591 None:intergenic 30.0%
TGGTTAAAATGTTCAATCAC+GGG + chr1_3:56234764-56234783 Msa0127020:intron 30.0%
! GCAGAAATGTTTTTCTAACA+TGG - chr1_3:56234853-56234872 None:intergenic 30.0%
! CATGGAGTATCAAAAAGTAA+AGG - chr1_3:56235009-56235028 None:intergenic 30.0%
! ACAACAAAAGTGTGCATTAA+GGG - chr1_3:56235135-56235154 None:intergenic 30.0%
!!! ATCCACACATTTTTTAGGTT+TGG + chr1_3:56235475-56235494 Msa0127020:intron 30.0%
!!! TCCACACATTTTTTAGGTTT+GGG + chr1_3:56235476-56235495 Msa0127020:intron 30.0%
TTCATCTTAGTGTTTACACA+TGG - chr1_3:56235655-56235674 None:intergenic 30.0%
! AATTTTCATGTTGGGAAAAC+GGG - chr1_3:56235689-56235708 None:intergenic 30.0%
!!! TCAGAGTATTTTGATCACAA+CGG + chr1_3:56235719-56235738 Msa0127020:intron 30.0%
AAATGCATTTGCATATCAAG+AGG - chr1_3:56236307-56236326 None:intergenic 30.0%
TCTTGATATGCAAATGCATT+TGG + chr1_3:56236306-56236325 Msa0127020:intron 30.0%
CTAATTACGCTCATATAAGT+TGG - chr1_3:56236359-56236378 None:intergenic 30.0%
CAACTTATATGAGCGTAATT+AGG + chr1_3:56236357-56236376 Msa0127020:intron 30.0%
!!! AGTTGTGATTTTTAGGTTTC+TGG - chr1_3:56237117-56237136 None:intergenic 30.0%
! GGTGAAAAGTTGTGATTTTT+AGG - chr1_3:56237124-56237143 None:intergenic 30.0%
GATGAAGGAATCATGAATAT+AGG - chr1_3:56237145-56237164 None:intergenic 30.0%
! ATTAGATGCTATTTGGATGA+AGG - chr1_3:56237160-56237179 None:intergenic 30.0%
TTTGGTGAGAATTGAGAATT+AGG - chr1_3:56237273-56237292 None:intergenic 30.0%
! AGCATGATTAGGTTAAGTTT+TGG - chr1_3:56237291-56237310 None:intergenic 30.0%
AGGATGAATTTAGCATGATT+AGG - chr1_3:56237302-56237321 None:intergenic 30.0%
ATTTCATCATAACCAGGTAA+GGG - chr1_3:56237364-56237383 None:intergenic 30.0%
! TTATGAGGGATATTTTGTTG+TGG - chr1_3:56237614-56237633 None:intergenic 30.0%
ATCCAAAATGATGGTATTCA+AGG + chr1_3:56237796-56237815 Msa0127020:intron 30.0%
TTCAAGGAGTAAATAAACTC+GGG + chr1_3:56237812-56237831 Msa0127020:intron 30.0%
TTGAAGTAATATGTGCTTGT+TGG - chr1_3:56237911-56237930 None:intergenic 30.0%
GCTTGTGAAGTTAATTTAGA+TGG - chr1_3:56238181-56238200 None:intergenic 30.0%
TAATAAGAAAACCAGGAACA+GGG + chr1_3:56238239-56238258 Msa0127020:CDS 30.0%
AATTACTGTTGGTATGGTTA+AGG - chr1_3:56238413-56238432 None:intergenic 30.0%
GCACAAAATCAAATTACTGT+TGG - chr1_3:56238424-56238443 None:intergenic 30.0%
AATCAAAAGCAGTTAAAGCA+AGG - chr1_3:56238549-56238568 None:intergenic 30.0%
!!! CTTTATTCTTTTTTTCGAGC+AGG - chr1_3:56238591-56238610 None:intergenic 30.0%
!! AATATTTGTTTTCTCCGTGT+AGG + chr1_3:56238695-56238714 Msa0127020:intron 30.0%
! GCGTCATTCAAATTATTTTC+AGG + chr1_3:56238938-56238957 Msa0127020:intron 30.0%
!! TTTCAGGTCAAACTTCTTTT+AGG + chr1_3:56238954-56238973 Msa0127020:intron 30.0%
! TTCAGGTCAAACTTCTTTTA+GGG + chr1_3:56238955-56238974 Msa0127020:intron 30.0%
TCCATTTGTAAAACAGATCA+AGG + chr1_3:56239120-56239139 Msa0127020:intron 30.0%
! TCCTTGATCTGTTTTACAAA+TGG - chr1_3:56239124-56239143 None:intergenic 30.0%
ATAAATACAGGATGAATACC+TGG - chr1_3:56239215-56239234 None:intergenic 30.0%
ATTTATCCACTTACATGTAG+TGG + chr1_3:56239295-56239314 Msa0127020:intron 30.0%
TTGAAGTTTAGTGAACTTCT+AGG + chr1_3:56239352-56239371 Msa0127020:intron 30.0%
TGAAGTTTAGTGAACTTCTA+GGG + chr1_3:56239353-56239372 Msa0127020:intron 30.0%
TGAAGTTTAGTGAACTTCTA+CGG + chr1_3:56239353-56239372 Msa0127020:intron 30.0%
TATCAATAACGATGCAAGAA+TGG + chr1_3:56239419-56239438 Msa0127020:intron 30.0%
TGTGCATATCTTAAGATTAG+CGG - chr1_3:56239462-56239481 None:intergenic 30.0%
!! GAAAAAGTGCGTCAATTTTT+GGG - chr1_3:56239518-56239537 None:intergenic 30.0%
!! AGAAAAAGTGCGTCAATTTT+TGG - chr1_3:56239519-56239538 None:intergenic 30.0%
!!! TCTTTTTCAGGAAAAGTAGA+TGG + chr1_3:56239697-56239716 Msa0127020:intron 30.0%
ACTCCGAAAAAATATCAGTA+TGG - chr1_3:56239725-56239744 None:intergenic 30.0%
!!! GATATTTTTTCGGAGTTTGA+TGG + chr1_3:56239729-56239748 Msa0127020:CDS 30.0%
ATACTTGAAGTCTTCATTCT+TGG + chr1_3:56239915-56239934 Msa0127020:intron 30.0%
GGTTCTTGATTAGTAATAAC+CGG + chr1_3:56239992-56240011 Msa0127020:intron 30.0%
CTTTATGCTATTGTAGGTTA+CGG - chr1_3:56240036-56240055 None:intergenic 30.0%
TTAGATCTGAGAATCTCAAA+AGG + chr1_3:56240207-56240226 Msa0127020:CDS 30.0%
CTGTGGTAAATATGACAAAA+AGG + chr1_3:56240582-56240601 Msa0127020:CDS 30.0%
AATATGACAAAAAGGCTTGA+AGG + chr1_3:56240590-56240609 Msa0127020:CDS 30.0%
AATACACTTACAGTAAACCA+TGG - chr1_3:56240714-56240733 None:intergenic 30.0%
! ATTTGATGATAAAGGAAAGC+AGG + chr1_3:56240735-56240754 Msa0127020:three_prime_UTR 30.0%
! ATAAAGGAAAGCAGGTTTTT+GGG + chr1_3:56240743-56240762 Msa0127020:three_prime_UTR 30.0%
TTCAATTCCATTTCCGATCA+TGG + chr1_3:56229573-56229592 Msa0127020:exon 35.0%
ATTTCGATTCCTTCCATGAT+CGG - chr1_3:56229589-56229608 None:intergenic 35.0%
TTGGATTCGTTGTTGAATGT+TGG - chr1_3:56229619-56229638 None:intergenic 35.0%
TGAATTGCATATGTCATCGT+TGG - chr1_3:56229638-56229657 None:intergenic 35.0%
TTCATAGGGATAGTGTTCAT+TGG + chr1_3:56230013-56230032 Msa0127020:CDS 35.0%
! ACGTTGTTCAATCTTTTGCT+GGG + chr1_3:56230048-56230067 Msa0127020:CDS 35.0%
! TACTATTGATTGGAGCTATG+TGG + chr1_3:56230207-56230226 Msa0127020:intron 35.0%
GGCAATGTACAACTTGTATT+AGG - chr1_3:56230341-56230360 None:intergenic 35.0%
TACAAGTTGTACATTGCCTT+TGG + chr1_3:56230343-56230362 Msa0127020:intron 35.0%
ACGTTGTTCATGTAATAGCT+GGG + chr1_3:56230537-56230556 Msa0127020:intron 35.0%
TTCATGTAATAGCTGGGATT+GGG + chr1_3:56230543-56230562 Msa0127020:intron 35.0%
ACAAGCTCAGCAAATTAGAA+TGG - chr1_3:56230579-56230598 None:intergenic 35.0%
! TTAAATGTTGTGGACTGTTG+GGG + chr1_3:56230626-56230645 Msa0127020:intron 35.0%
AGTTCTTACAACAGGTAAGA+AGG + chr1_3:56230728-56230747 Msa0127020:intron 35.0%
GTGTCAAAAACCTACTTGAA+AGG + chr1_3:56230824-56230843 Msa0127020:CDS 35.0%
! GCAGTAAAAACCTTTCAAGT+AGG - chr1_3:56230837-56230856 None:intergenic 35.0%
CAAGAACATACAAAACCTGT+TGG - chr1_3:56230906-56230925 None:intergenic 35.0%
! CTTTTAGTGACAACAAAGGT+AGG - chr1_3:56230945-56230964 None:intergenic 35.0%
ACCTCATCAAATGAGATTTC+TGG + chr1_3:56231129-56231148 Msa0127020:CDS 35.0%
TCCAGAAATCTCATTTGATG+AGG - chr1_3:56231133-56231152 None:intergenic 35.0%
! TCAAATGAGATTTCTGGAGA+TGG + chr1_3:56231135-56231154 Msa0127020:CDS 35.0%
TTGAGATCACTGAAAACACT+GGG - chr1_3:56231243-56231262 None:intergenic 35.0%
! TTTGAGATCACTGAAAACAC+TGG - chr1_3:56231244-56231263 None:intergenic 35.0%
! AGTGTTTTCAGTGATCTCAA+AGG + chr1_3:56231243-56231262 Msa0127020:CDS 35.0%
AGATAACTCTGGATGAATCA+AGG + chr1_3:56231462-56231481 Msa0127020:CDS 35.0%
TCCGCAATGTTTCACAAATT+AGG + chr1_3:56231584-56231603 Msa0127020:CDS 35.0%
!! CTTGTTTCTGTTTCTTGCAT+TGG + chr1_3:56231627-56231646 Msa0127020:intron 35.0%
! AATTGTTGTTGTACTTCTCC+CGG + chr1_3:56231784-56231803 Msa0127020:intron 35.0%
AACTCTCCTTACTTTATGAG+AGG + chr1_3:56231920-56231939 Msa0127020:CDS 35.0%
! GAGAGGTATACTCAAAAACT+TGG + chr1_3:56231937-56231956 Msa0127020:CDS 35.0%
CTAAAGGGAAAATCTTCATC+AGG - chr1_3:56231980-56231999 None:intergenic 35.0%
! CTGATGAAGATTTTCCCTTT+AGG + chr1_3:56231978-56231997 Msa0127020:CDS 35.0%
!! AGATTTTCCCTTTAGGAAAC+AGG + chr1_3:56231985-56232004 Msa0127020:CDS 35.0%
AGTTAGACCTGTTTCCTAAA+GGG - chr1_3:56231995-56232014 None:intergenic 35.0%
TAGTTAGACCTGTTTCCTAA+AGG - chr1_3:56231996-56232015 None:intergenic 35.0%
AGTTTCGTATTTGTGTGGTT+TGG - chr1_3:56232046-56232065 None:intergenic 35.0%
GTTCATATAATTGGGACACA+TGG - chr1_3:56232114-56232133 None:intergenic 35.0%
GGCCAATATCATAATCAAGT+TGG + chr1_3:56232517-56232536 Msa0127020:intron 35.0%
!! TTGGTTTTTGTTAGAGGATC+TGG + chr1_3:56232536-56232555 Msa0127020:intron 35.0%
! TGGTTTTTGTTAGAGGATCT+GGG + chr1_3:56232537-56232556 Msa0127020:intron 35.0%
TCTTCAGCTTCCAAATTCAA+TGG - chr1_3:56232704-56232723 None:intergenic 35.0%
! GACGAAATTTTGCCTATGAT+TGG + chr1_3:56232800-56232819 Msa0127020:CDS 35.0%
TGAGTAGGAAATGAATACCA+TGG - chr1_3:56232893-56232912 None:intergenic 35.0%
AGCTGCAAAGTATAATGAGT+AGG - chr1_3:56232908-56232927 None:intergenic 35.0%
AAAGAAGAACCTGATATTCG+TGG + chr1_3:56233073-56233092 Msa0127020:CDS 35.0%
AGATGATATTGGGCAAGATA+TGG + chr1_3:56233162-56233181 Msa0127020:CDS 35.0%
AGGTTGCAACAGAAAATTTG+AGG + chr1_3:56233218-56233237 Msa0127020:CDS 35.0%
GGTTGCAACAGAAAATTTGA+GGG + chr1_3:56233219-56233238 Msa0127020:CDS 35.0%
! AACAGAAAATTTGAGGGCAT+TGG + chr1_3:56233225-56233244 Msa0127020:CDS 35.0%
CAGATCTTTCAACAAGTTCT+TGG - chr1_3:56233260-56233279 None:intergenic 35.0%
CTATAGTTGAGCCAAATGTA+TGG + chr1_3:56233347-56233366 Msa0127020:intron 35.0%
ATCATCATCAGTTTCACTCA+TGG + chr1_3:56233549-56233568 Msa0127020:intron 35.0%
AACTCCAAAGCACAAAATGT+TGG - chr1_3:56233670-56233689 None:intergenic 35.0%
TGGACAACTAATGAGCAATA+CGG - chr1_3:56233825-56233844 None:intergenic 35.0%
! TTGCTCTAGATATCTACTCA+TGG - chr1_3:56233845-56233864 None:intergenic 35.0%
CAAAATGCCAACAGAATAGA+TGG + chr1_3:56234221-56234240 Msa0127020:CDS 35.0%
ATGAATCTCAATCAGTTCTC+AGG + chr1_3:56234279-56234298 Msa0127020:CDS 35.0%
GATATATAGTTCTCCTTGCA+AGG + chr1_3:56234556-56234575 Msa0127020:intron 35.0%
GATCATTATTTGCAGGATGT+TGG + chr1_3:56234627-56234646 Msa0127020:intron 35.0%
!!! TCTGCTTACTTTTTTCTCGT+TGG + chr1_3:56234868-56234887 Msa0127020:intron 35.0%
!! TTTTGTTTCATCGAAGCTTG+AGG + chr1_3:56234916-56234935 Msa0127020:CDS 35.0%
AGTAAAGGCAATCAAGTCTA+TGG - chr1_3:56234994-56235013 None:intergenic 35.0%
CTTGGACTGTTAAGAAGTAA+AGG - chr1_3:56235063-56235082 None:intergenic 35.0%
! ATACCTTTGATTTCGAGTCT+TGG - chr1_3:56235081-56235100 None:intergenic 35.0%
! TGGATGCAATAACCCAATTT+TGG - chr1_3:56235104-56235123 None:intergenic 35.0%
! CAACAAAAGTGTGCATTAAG+GGG - chr1_3:56235134-56235153 None:intergenic 35.0%
! CACAACAAAAGTGTGCATTA+AGG - chr1_3:56235136-56235155 None:intergenic 35.0%
! CTTAATGCACACTTTTGTTG+TGG + chr1_3:56235134-56235153 Msa0127020:intron 35.0%
TGTGGTGTATCTGATATGTT+CGG + chr1_3:56235152-56235171 Msa0127020:intron 35.0%
TTTCCTCACTGAGATAATAC+TGG + chr1_3:56235285-56235304 Msa0127020:CDS 35.0%
!! GATAATACTGGCTCTTAAAG+AGG + chr1_3:56235297-56235316 Msa0127020:CDS 35.0%
CCTAAAAAATGTGTGGATAC+TGG - chr1_3:56235473-56235492 None:intergenic 35.0%
!!! CCAGTATCCACACATTTTTT+AGG + chr1_3:56235470-56235489 Msa0127020:intron 35.0%
!!! CCACACATTTTTTAGGTTTG+GGG + chr1_3:56235477-56235496 Msa0127020:intron 35.0%
!!! CACACATTTTTTAGGTTTGG+GGG + chr1_3:56235478-56235497 Msa0127020:intron 35.0%
! ATTTTCATGTTGGGAAAACG+GGG - chr1_3:56235688-56235707 None:intergenic 35.0%
GTTCATAAAAGAGACACGTA+AGG + chr1_3:56235894-56235913 Msa0127020:intron 35.0%
GTGCAGGTAATAAAGATTAG+AGG - chr1_3:56235997-56236016 None:intergenic 35.0%
!! TACGCTCATATAAGTTGGTT+GGG - chr1_3:56236354-56236373 None:intergenic 35.0%
!! TTACGCTCATATAAGTTGGT+TGG - chr1_3:56236355-56236374 None:intergenic 35.0%
! AGCTTTTGTTCACTATGTTG+GGG - chr1_3:56236401-56236420 None:intergenic 35.0%
! GAGCTTTTGTTCACTATGTT+GGG - chr1_3:56236402-56236421 None:intergenic 35.0%
TGCTTAGTCATTCACATGAT+TGG - chr1_3:56236443-56236462 None:intergenic 35.0%
!! CACTCATATAAGTTGGTTGA+GGG - chr1_3:56236481-56236500 None:intergenic 35.0%
!! ACACTCATATAAGTTGGTTG+AGG - chr1_3:56236482-56236501 None:intergenic 35.0%
CATTGCACACTCATATAAGT+TGG - chr1_3:56236488-56236507 None:intergenic 35.0%
CAACTTATATGAGTGTGCAA+TGG + chr1_3:56236486-56236505 Msa0127020:intron 35.0%
ACTCATACGACTCATAATCA+TGG + chr1_3:56236545-56236564 Msa0127020:intron 35.0%
AGTAAGTTAGAGAGCTGTTT+GGG - chr1_3:56236805-56236824 None:intergenic 35.0%
AAGTAAGTTAGAGAGCTGTT+TGG - chr1_3:56236806-56236825 None:intergenic 35.0%
AGCTCTCTAACTTACTTCTA+AGG + chr1_3:56236809-56236828 Msa0127020:intron 35.0%
GATTTCATCATAACCAGGTA+AGG - chr1_3:56237365-56237384 None:intergenic 35.0%
!! CGTACGTTTTTGGAGAAAAA+GGG - chr1_3:56237427-56237446 None:intergenic 35.0%
!! ACGTACGTTTTTGGAGAAAA+AGG - chr1_3:56237428-56237447 None:intergenic 35.0%
ACTGGTAACATCCAAAATGA+TGG + chr1_3:56237787-56237806 Msa0127020:intron 35.0%
! CTCCTTGAATACCATCATTT+TGG - chr1_3:56237801-56237820 None:intergenic 35.0%
!! TTTTAAGTAATAGGATGGGC+TGG + chr1_3:56238027-56238046 Msa0127020:intron 35.0%
TGTGGGTATAATGTTCAGAA+AGG + chr1_3:56238120-56238139 Msa0127020:intron 35.0%
TACAGGCTAATAAGAAAACC+AGG + chr1_3:56238232-56238251 Msa0127020:intron 35.0%
CTAATAAGAAAACCAGGAAC+AGG + chr1_3:56238238-56238257 Msa0127020:CDS 35.0%
! TATGTGGAGTTTTTCCAACA+AGG - chr1_3:56238474-56238493 None:intergenic 35.0%
! AGCTCAAGGAAATGTTACTT+CGG - chr1_3:56238667-56238686 None:intergenic 35.0%
GGCCAATCTTGGTTTATTAA+AGG + chr1_3:56238716-56238735 Msa0127020:intron 35.0%
! GTTTTATATGTTCTTCAGGC+AGG - chr1_3:56239022-56239041 None:intergenic 35.0%
TTGTAAAACAGATCAAGGAG+CGG + chr1_3:56239125-56239144 Msa0127020:intron 35.0%
TTTCTTCAGATTTAGCACCT+CGG - chr1_3:56239162-56239181 None:intergenic 35.0%
TTTCAAAAGCAACTACATCC+AGG + chr1_3:56239194-56239213 Msa0127020:CDS 35.0%
ACAAGCATGTCATGTTAACA+TGG - chr1_3:56239491-56239510 None:intergenic 35.0%
! GACAATGTGATGTCTTTTTC+AGG + chr1_3:56239685-56239704 Msa0127020:intron 35.0%
GATATTGCATAAATTGGCAG+TGG + chr1_3:56239971-56239990 Msa0127020:intron 35.0%
AGGACACTTTATGCTATTGT+AGG - chr1_3:56240042-56240061 None:intergenic 35.0%
! AGTTGTTACTTGTTCCATCT+AGG + chr1_3:56240084-56240103 Msa0127020:intron 35.0%
CCTAGCATCATATTCTGAAT+CGG - chr1_3:56240324-56240343 None:intergenic 35.0%
GAATATGCTAGCAAAAAAGC+TGG + chr1_3:56240446-56240465 Msa0127020:CDS 35.0%
AGCTTGAACCTTATGCATAT+TGG + chr1_3:56240492-56240511 Msa0127020:CDS 35.0%
!! CTCATCATTTTTCGATCAAG+TGG - chr1_3:56240518-56240537 None:intergenic 35.0%
ATCGAAAAATGATGAGTCGT+CGG + chr1_3:56240522-56240541 Msa0127020:CDS 35.0%
! AAAAAAAGGTATGGCTACTG+TGG + chr1_3:56240565-56240584 Msa0127020:CDS 35.0%
! GATAAAGGAAAGCAGGTTTT+TGG + chr1_3:56240742-56240761 Msa0127020:three_prime_UTR 35.0%
TGGAATTGAACAGTAAACCC+TGG - chr1_3:56229563-56229582 None:intergenic 40.0%
ATTCCATTTCCGATCATGGA+AGG + chr1_3:56229577-56229596 Msa0127020:exon 40.0%
ATTCCTTCCATGATCGGAAA+TGG - chr1_3:56229583-56229602 None:intergenic 40.0%
GATCATGGAAGGAATCGAAA+TGG + chr1_3:56229588-56229607 Msa0127020:exon 40.0%
TTAAAAGCGATTCGATGACG+TGG - chr1_3:56229834-56229853 None:intergenic 40.0%
! GACGTTGTTCAATCTTTTGC+TGG + chr1_3:56230047-56230066 Msa0127020:CDS 40.0%
! CGTTGTTCAATCTTTTGCTG+GGG + chr1_3:56230049-56230068 Msa0127020:CDS 40.0%
!! TCTTACTGATTCAAGACCGA+AGG + chr1_3:56230074-56230093 Msa0127020:CDS 40.0%
GTTGTACATTGCCTTTGGTT+TGG + chr1_3:56230348-56230367 Msa0127020:intron 40.0%
! GAGATGGAAAAGCGTGAAAA+AGG - chr1_3:56230490-56230509 None:intergenic 40.0%
CACGTTGTTCATGTAATAGC+TGG + chr1_3:56230536-56230555 Msa0127020:intron 40.0%
GTTCATGTAATAGCTGGGAT+TGG + chr1_3:56230542-56230561 Msa0127020:intron 40.0%
! TGCTGACTAGTTCTTACAAC+AGG + chr1_3:56230720-56230739 Msa0127020:intron 40.0%
GTAAGAAGGCAATCCCATTT+GGG + chr1_3:56230742-56230761 Msa0127020:CDS 40.0%
AGTTTATCAAGACATCACGG+AGG - chr1_3:56230768-56230787 None:intergenic 40.0%
! GAAAGGTTTTTACTGCTTGC+TGG + chr1_3:56230841-56230860 Msa0127020:CDS 40.0%
AAATGCTGGTGAAGGAACTA+AGG + chr1_3:56230876-56230895 Msa0127020:CDS 40.0%
AATGCTGGTGAAGGAACTAA+GGG + chr1_3:56230877-56230896 Msa0127020:CDS 40.0%
CAAAGGTAGGCATTCTTTCA+AGG - chr1_3:56230932-56230951 None:intergenic 40.0%
!! TGAGGTGTTGTGCACATTAT+CGG + chr1_3:56231098-56231117 Msa0127020:CDS 40.0%
TTTGGCATCTGAACATGAAG+AGG + chr1_3:56231358-56231377 Msa0127020:CDS 40.0%
GAGTTTGATTAAACAGGGAG+TGG + chr1_3:56231436-56231455 Msa0127020:CDS 40.0%
AACATCAAAAACTCTGTCCC+AGG - chr1_3:56231561-56231580 None:intergenic 40.0%
TGGGAATTTGAATGGTTTCC+TGG + chr1_3:56232484-56232503 Msa0127020:intron 40.0%
TGCCTATGATTGGACGTATT+AGG + chr1_3:56232810-56232829 Msa0127020:CDS 40.0%
GCCTATGATTGGACGTATTA+GGG + chr1_3:56232811-56232830 Msa0127020:CDS 40.0%
TCCCTAATACGTCCAATCAT+AGG - chr1_3:56232815-56232834 None:intergenic 40.0%
TATTAGGGAGAAGGCTCAAA+AGG + chr1_3:56232826-56232845 Msa0127020:CDS 40.0%
!! AAGCTTTTAGCTGTGTCTGA+AGG - chr1_3:56233019-56233038 None:intergenic 40.0%
AGACACAGCTAAAAGCTTCA+AGG + chr1_3:56233021-56233040 Msa0127020:CDS 40.0%
TATGGCCAAAGAACAAGTCT+TGG + chr1_3:56233180-56233199 Msa0127020:CDS 40.0%
CTTGGTTAATTACTCGCAAC+AGG + chr1_3:56233198-56233217 Msa0127020:CDS 40.0%
GGAATGCAATGCCATACATT+TGG - chr1_3:56233361-56233380 None:intergenic 40.0%
CATGCTCAATTGCAAGAACA+TGG - chr1_3:56233382-56233401 None:intergenic 40.0%
TTGCAATTGAGCATGCATGT+TGG + chr1_3:56233387-56233406 Msa0127020:intron 40.0%
ATAGTACATACGAGCACAAC+AGG - chr1_3:56233469-56233488 None:intergenic 40.0%
! GTGAAACTGATGATGATACG+TGG - chr1_3:56233546-56233565 None:intergenic 40.0%
AAGCACAAAATGTTGGCAAC+TGG - chr1_3:56233663-56233682 None:intergenic 40.0%
! GTTGCCAACATTTTGTGCTT+TGG + chr1_3:56233663-56233682 Msa0127020:intron 40.0%
TACTAGAAGCAAAGTGAGCT+TGG - chr1_3:56233724-56233743 None:intergenic 40.0%
AAGGGGATGTAGAGATTATG+TGG + chr1_3:56233780-56233799 Msa0127020:intron 40.0%
AGGGGATGTAGAGATTATGT+GGG + chr1_3:56233781-56233800 Msa0127020:intron 40.0%
GTCTGAACCATCTATTCTGT+TGG - chr1_3:56234231-56234250 None:intergenic 40.0%
AGTATTAAAGCCAGCATTGC+AGG + chr1_3:56234524-56234543 Msa0127020:CDS 40.0%
AAGTTCTCTCGATCATACTC+AGG + chr1_3:56234673-56234692 Msa0127020:CDS 40.0%
AGTTCTCTCGATCATACTCA+GGG + chr1_3:56234674-56234693 Msa0127020:CDS 40.0%
GGATTATTCTTGACAGAGCT+CGG + chr1_3:56234889-56234908 Msa0127020:intron 40.0%
AGTCCAAGACTCGAAATCAA+AGG + chr1_3:56235075-56235094 Msa0127020:CDS 40.0%
ATCTCAGTGAGGAAAACTTC+TGG - chr1_3:56235280-56235299 None:intergenic 40.0%
AGGTAATGCAGTGTTAGTTG+TGG + chr1_3:56235317-56235336 Msa0127020:intron 40.0%
AAATAAATGCTACGTGGGAG+AGG - chr1_3:56235370-56235389 None:intergenic 40.0%
!!! GTATTTCTTTTGGCTCTGCT+CGG + chr1_3:56235406-56235425 Msa0127020:intron 40.0%
CCCCAAACCTAAAAAATGTG+TGG - chr1_3:56235480-56235499 None:intergenic 40.0%
!!! ACATTTTTTAGGTTTGGGGG+TGG + chr1_3:56235481-56235500 Msa0127020:intron 40.0%
!!! CATTTTTTAGGTTTGGGGGT+GGG + chr1_3:56235482-56235501 Msa0127020:intron 40.0%
CTACAAGGAATGGACAGATT+AGG - chr1_3:56235547-56235566 None:intergenic 40.0%
CCACTACTTACTACAAGGAA+TGG - chr1_3:56235557-56235576 None:intergenic 40.0%
CCATTCCTTGTAGTAAGTAG+TGG + chr1_3:56235554-56235573 Msa0127020:intron 40.0%
TTGCACATACAATAGCACAC+TGG + chr1_3:56235584-56235603 Msa0127020:intron 40.0%
TGCACATACAATAGCACACT+GGG + chr1_3:56235585-56235604 Msa0127020:intron 40.0%
GCACACTGGGTAATTGAAAT+AGG + chr1_3:56235598-56235617 Msa0127020:intron 40.0%
ATTTAAAAGTCTTGGCACGC+AGG + chr1_3:56235846-56235865 Msa0127020:intron 40.0%
TATTACCTGCACATTACCCA+CGG + chr1_3:56236005-56236024 Msa0127020:intron 40.0%
TTGATAGAGTTGCATGGTCA+AGG - chr1_3:56236250-56236269 None:intergenic 40.0%
! GCTTTTGTTCACTATGTTGG+GGG - chr1_3:56236400-56236419 None:intergenic 40.0%
! GGAGCTTTTGTTCACTATGT+TGG - chr1_3:56236403-56236422 None:intergenic 40.0%
ACATAGTGAACAAAAGCTCC+AGG + chr1_3:56236403-56236422 Msa0127020:intron 40.0%
CATAGTGAACAAAAGCTCCA+GGG + chr1_3:56236404-56236423 Msa0127020:intron 40.0%
GTCATTCACATGATTGGTGA+GGG - chr1_3:56236437-56236456 None:intergenic 40.0%
AGTCATTCACATGATTGGTG+AGG - chr1_3:56236438-56236457 None:intergenic 40.0%
TGTGAATGACTAAGCATTCC+AGG + chr1_3:56236447-56236466 Msa0127020:intron 40.0%
GTGAATGACTAAGCATTCCA+GGG + chr1_3:56236448-56236467 Msa0127020:intron 40.0%
TAAGCTCCAGAAGTCTGTTA+TGG - chr1_3:56236773-56236792 None:intergenic 40.0%
! AAATTAGTCTCACCCTTACC+TGG + chr1_3:56237349-56237368 Msa0127020:intron 40.0%
ACTGCGATTTCATCATAACC+AGG - chr1_3:56237370-56237389 None:intergenic 40.0%
AGGGAGAAAAGTCAGAAAAG+AGG - chr1_3:56237408-56237427 None:intergenic 40.0%
ACATAACTGTTGCATGCTAC+TGG + chr1_3:56237769-56237788 Msa0127020:intron 40.0%
ATTCTGTAACGACCATCTAG+TGG + chr1_3:56237843-56237862 Msa0127020:intron 40.0%
TTCTGTAACGACCATCTAGT+GGG + chr1_3:56237844-56237863 Msa0127020:intron 40.0%
TTTACTCAGGGATATGTGCT+TGG - chr1_3:56237937-56237956 None:intergenic 40.0%
AGATGGCAAAAAGTGATGTC+TGG - chr1_3:56238164-56238183 None:intergenic 40.0%
TTAACTTCACAAGCTTCCAG+AGG + chr1_3:56238187-56238206 Msa0127020:intron 40.0%
ACTTCAAAATTCAGCACCTC+TGG - chr1_3:56238206-56238225 None:intergenic 40.0%
GTTGGTATGGTTAAGGCAAA+GGG - chr1_3:56238406-56238425 None:intergenic 40.0%
TGTTGGTATGGTTAAGGCAA+AGG - chr1_3:56238407-56238426 None:intergenic 40.0%
!!! TTGTGCTGTTTTGTGAGCTT+AGG + chr1_3:56238438-56238457 Msa0127020:intron 40.0%
ACGGTTGCACTTATCATATG+TGG - chr1_3:56238490-56238509 None:intergenic 40.0%
ATGATAAGTGCAACCGTCAA+AGG + chr1_3:56238493-56238512 Msa0127020:CDS 40.0%
AGCAAGGTCAGAGAATTCAT+AGG - chr1_3:56238533-56238552 None:intergenic 40.0%
!! TAAACCAAGATTGGCCTACA+CGG - chr1_3:56238712-56238731 None:intergenic 40.0%
CAATCCTTCTGCTTGTGATT+TGG - chr1_3:56238751-56238770 None:intergenic 40.0%
TGGTTGAGTGTTTGTTTCAG+TGG + chr1_3:56238790-56238809 Msa0127020:CDS 40.0%
!! GTTGAAGATGGCTGTTGTTT+TGG + chr1_3:56238884-56238903 Msa0127020:intron 40.0%
TCAACTAACCTTGCGTATGT+TGG - chr1_3:56239051-56239070 None:intergenic 40.0%
GTGCTAAATCTGAAGAAACC+AGG + chr1_3:56239164-56239183 Msa0127020:CDS 40.0%
!!! TGCTTTTGAAACATGAGACC+TGG - chr1_3:56239185-56239204 None:intergenic 40.0%
AGTGATGCAGAATACCTGAA+CGG + chr1_3:56239765-56239784 Msa0127020:CDS 40.0%
TTACGGAGATAACTCATCAC+AGG - chr1_3:56240019-56240038 None:intergenic 40.0%
!! AGCCACTTGATTTGCTTGAT+CGG + chr1_3:56240165-56240184 Msa0127020:CDS 40.0%
AGAATCTCAAAAGGAAGTCC+AGG + chr1_3:56240216-56240235 Msa0127020:CDS 40.0%
CTGAAGGACGTTTGATTATC+CGG + chr1_3:56240267-56240286 Msa0127020:CDS 40.0%
TGAAGGACGTTTGATTATCC+GGG + chr1_3:56240268-56240287 Msa0127020:CDS 40.0%
TTTGATTATCCGGGAGGAAA+GGG + chr1_3:56240277-56240296 Msa0127020:CDS 40.0%
CCGATTCAGAATATGATGCT+AGG + chr1_3:56240321-56240340 Msa0127020:CDS 40.0%
CTTGCAGACAAATGACTATC+AGG - chr1_3:56240353-56240372 None:intergenic 40.0%
CTGATAGTCATTTGTCTGCA+AGG + chr1_3:56240351-56240370 Msa0127020:CDS 40.0%
TATGCTAGCAAAAAAGCTGG+TGG + chr1_3:56240449-56240468 Msa0127020:CDS 40.0%
AAGCTGGTGGAGATATTAAG+AGG + chr1_3:56240462-56240481 Msa0127020:CDS 40.0%
TGGTGGAGATATTAAGAGGA+AGG + chr1_3:56240466-56240485 Msa0127020:CDS 40.0%
TCAAGTGGCCAATATGCATA+AGG - chr1_3:56240503-56240522 None:intergenic 40.0%
AATAACGCAGTCTTGAAGCT+GGG - chr1_3:56240827-56240846 None:intergenic 40.0%
AATATGCGACTGGGGAAGAA+GGG - chr1_3:56229756-56229775 None:intergenic 45.0%
AAATATGCGACTGGGGAAGA+AGG - chr1_3:56229757-56229776 None:intergenic 45.0%
TCTTCCCCAGTCGCATATTT+CGG + chr1_3:56229757-56229776 Msa0127020:CDS 45.0%
TCCTTCTTCAACACAGCTAC+GGG - chr1_3:56229886-56229905 None:intergenic 45.0%
CTCCTTCTTCAACACAGCTA+CGG - chr1_3:56229887-56229906 None:intergenic 45.0%
TTCTCCGTCGTCGAAGAATT+CGG + chr1_3:56229945-56229964 Msa0127020:CDS 45.0%
!! TCGGAGAGTATCGTTGTTGA+TGG + chr1_3:56229964-56229983 Msa0127020:CDS 45.0%
GCAGGATCAAACCAAACCAA+AGG - chr1_3:56230362-56230381 None:intergenic 45.0%
TGGAAGATTGAACACTACGC+AGG - chr1_3:56230380-56230399 None:intergenic 45.0%
TGTGAGCAAAATGACGGTAG+TGG - chr1_3:56230400-56230419 None:intergenic 45.0%
GGTAAGAAGGCAATCCCATT+TGG + chr1_3:56230741-56230760 Msa0127020:intron 45.0%
CTATTAGCATCTGCGAGTGA+AGG + chr1_3:56230802-56230821 Msa0127020:CDS 45.0%
!! AGGTTTTTACTGCTTGCTGG+TGG + chr1_3:56230844-56230863 Msa0127020:CDS 45.0%
GCAAATGCAAATGCTGGTGA+AGG + chr1_3:56230868-56230887 Msa0127020:CDS 45.0%
ATTATGCGCCTAGTGACTAG+GGG - chr1_3:56231018-56231037 None:intergenic 45.0%
CATTATGCGCCTAGTGACTA+GGG - chr1_3:56231019-56231038 None:intergenic 45.0%
!! TTCCTCTGAAGCACTACTTG+AGG + chr1_3:56231080-56231099 Msa0127020:CDS 45.0%
TGCATCTGTGACTGCGAATA+TGG - chr1_3:56231384-56231403 None:intergenic 45.0%
CTGGATGAATCAAGGAGATC+AGG + chr1_3:56231470-56231489 Msa0127020:CDS 45.0%
ATTATCACTATGCTGCTGCC+TGG + chr1_3:56231540-56231559 Msa0127020:CDS 45.0%
TTATCACTATGCTGCTGCCT+GGG + chr1_3:56231541-56231560 Msa0127020:CDS 45.0%
ATTGGGACACATGGTTGTTC+TGG - chr1_3:56232105-56232124 None:intergenic 45.0%
TTCAGGTCCCATTGCAACAA+GGG - chr1_3:56232663-56232682 None:intergenic 45.0%
! TTTCAGGTCCCATTGCAACA+AGG - chr1_3:56232664-56232683 None:intergenic 45.0%
GATTGGACGTATTAGGGAGA+AGG + chr1_3:56232817-56232836 Msa0127020:CDS 45.0%
! GGAGAAGGCTCAAAAGGTAT+TGG + chr1_3:56232832-56232851 Msa0127020:intron 45.0%
! CAGCGTTTTTCTTCTCTCCA+TGG + chr1_3:56232873-56232892 Msa0127020:intron 45.0%
TACTTTGCAGCTTGAGAAGC+AGG + chr1_3:56232916-56232935 Msa0127020:intron 45.0%
ACTTTGCAGCTTGAGAAGCA+GGG + chr1_3:56232917-56232936 Msa0127020:intron 45.0%
ACGCACTTGCTTACTCTTTG+TGG + chr1_3:56232966-56232985 Msa0127020:CDS 45.0%
!! AGATGATGGTGGTTGTTTGC+AGG + chr1_3:56233306-56233325 Msa0127020:CDS 45.0%
AAAAGCTGAAACATGGGCAC+TGG - chr1_3:56233508-56233527 None:intergenic 45.0%
TGCAGCAATCTTTCAACGTG+AGG - chr1_3:56234023-56234042 None:intergenic 45.0%
!! TGTTGGTGTCATGCAGAAGA+AGG + chr1_3:56234644-56234663 Msa0127020:CDS 45.0%
! TTCAATCACGGGTGTTGTCA+TGG + chr1_3:56234775-56234794 Msa0127020:intron 45.0%
TATGGCGTTTGGCAGAAGAA+TGG - chr1_3:56234976-56234995 None:intergenic 45.0%
GCAATCAAGTCTATGGCGTT+TGG - chr1_3:56234987-56235006 None:intergenic 45.0%
GAACTCAACTTTGACTGCCT+CGG - chr1_3:56235041-56235060 None:intergenic 45.0%
GTGCATTAAGGGGACAAACA+TGG - chr1_3:56235124-56235143 None:intergenic 45.0%
TGAACTTATGTACTGCCGAC+AGG + chr1_3:56235237-56235256 Msa0127020:intron 45.0%
AGGCCATTGAATCATCCTGT+CGG - chr1_3:56235255-56235274 None:intergenic 45.0%
GAGCCAGTATTATCTCAGTG+AGG - chr1_3:56235291-56235310 None:intergenic 45.0%
AGATTAGGAAGTTCCCGGTT+AGG - chr1_3:56235532-56235551 None:intergenic 45.0%
TGGACAGATTAGGAAGTTCC+CGG - chr1_3:56235537-56235556 None:intergenic 45.0%
GCTCACCACTACTTACTACA+AGG - chr1_3:56235562-56235581 None:intergenic 45.0%
ACAGGTTCAAGGAGTGAACA+TGG - chr1_3:56235627-56235646 None:intergenic 45.0%
TGTTTACACATGGCAGCAAC+AGG - chr1_3:56235645-56235664 None:intergenic 45.0%
TAGGTGCTCTGATACGTAAC+GGG - chr1_3:56235945-56235964 None:intergenic 45.0%
CTAGGTGCTCTGATACGTAA+CGG - chr1_3:56235946-56235965 None:intergenic 45.0%
! TTCATGAGTGGACTCTCAGT+TGG - chr1_3:56235972-56235991 None:intergenic 45.0%
!! AGATTAGAGGCGTTCATGAG+TGG - chr1_3:56235984-56236003 None:intergenic 45.0%
GAGGCAACATATACGCAGAA+GGG + chr1_3:56236030-56236049 Msa0127020:intron 45.0%
AGGCAACATATACGCAGAAG+GGG + chr1_3:56236031-56236050 Msa0127020:intron 45.0%
!! GTCGAGTTGATAGAGTTGCA+TGG - chr1_3:56236256-56236275 None:intergenic 45.0%
TGAGCGTAATTAGGCTCTTC+AGG + chr1_3:56236366-56236385 Msa0127020:intron 45.0%
GAGCGTAATTAGGCTCTTCA+GGG + chr1_3:56236367-56236386 Msa0127020:intron 45.0%
CACGTCGTTGTCTAAGTTGT+TGG - chr1_3:56236521-56236540 None:intergenic 45.0%
CATGAGTCGGTCTATGTTGT+TGG - chr1_3:56236586-56236605 None:intergenic 45.0%
TGTCTTGAGGTTGCATGAGT+CGG - chr1_3:56236599-56236618 None:intergenic 45.0%
! TGTCGACTGTTAGTGTCTTG+AGG - chr1_3:56236612-56236631 None:intergenic 45.0%
CAGTCACCATAACAGACTTC+TGG + chr1_3:56236764-56236783 Msa0127020:intron 45.0%
! GATCGCATCGGGACAATTTT+GGG + chr1_3:56236858-56236877 Msa0127020:intron 45.0%
ACTAACAGCTTAACTCGCAG+TGG + chr1_3:56236883-56236902 Msa0127020:intron 45.0%
TCCTACGTATTTACTCGCAG+TGG + chr1_3:56236951-56236970 Msa0127020:intron 45.0%
CAGAAAAGAGGAGAACCAGA+GGG - chr1_3:56237396-56237415 None:intergenic 45.0%
TCAGAAAAGAGGAGAACCAG+AGG - chr1_3:56237397-56237416 None:intergenic 45.0%
TGTAGAGAACACCCACTAGA+TGG - chr1_3:56237858-56237877 None:intergenic 45.0%
! TTGGAACCTCAGAAGAGTAC+AGG - chr1_3:56237892-56237911 None:intergenic 45.0%
TGCCAGAGCAAACACAACAA+TGG - chr1_3:56238053-56238072 None:intergenic 45.0%
AATGTCATAAGCCCTGTTCC+TGG - chr1_3:56238253-56238272 None:intergenic 45.0%
GAACAGGGCTTATGACATTC+TGG + chr1_3:56238254-56238273 Msa0127020:CDS 45.0%
CAAGCGAGCTAAACCTTTGA+CGG - chr1_3:56238509-56238528 None:intergenic 45.0%
TCGAGCAGGACAAATGTAGA+TGG - chr1_3:56238577-56238596 None:intergenic 45.0%
GTAGCCAAATCACAAGCAGA+AGG + chr1_3:56238744-56238763 Msa0127020:CDS 45.0%
GCTTATCACGAAGTGTGGAT+TGG + chr1_3:56238980-56238999 Msa0127020:CDS 45.0%
!! TATCACGAAGTGTGGATTGG+AGG + chr1_3:56238983-56239002 Msa0127020:CDS 45.0%
ACTTCTGACCAACATACGCA+AGG + chr1_3:56239040-56239059 Msa0127020:CDS 45.0%
GAAAGGCCACTACATGTAAG+TGG - chr1_3:56239304-56239323 None:intergenic 45.0%
GCTGTATCTTGAGCTGCATT+TGG + chr1_3:56239663-56239682 Msa0127020:intron 45.0%
GAGTTTGATGGAGACAGCAA+AGG + chr1_3:56239741-56239760 Msa0127020:CDS 45.0%
TAGAAATTGCCTTGCCGTTC+AGG - chr1_3:56239782-56239801 None:intergenic 45.0%
! AACGGCAAGGCAATTTCTAG+AGG + chr1_3:56239783-56239802 Msa0127020:CDS 45.0%
! ACGGCAAGGCAATTTCTAGA+GGG + chr1_3:56239784-56239803 Msa0127020:CDS 45.0%
!! TGCTGCTGATTTGAGATGTG+TGG - chr1_3:56239820-56239839 None:intergenic 45.0%
AATCAGCAGCATCGTCATTC+AGG + chr1_3:56239829-56239848 Msa0127020:CDS 45.0%
GAGATAACTCATCACAGGAC+CGG - chr1_3:56240014-56240033 None:intergenic 45.0%
AGTCTCATCTTGGACCTAGA+TGG - chr1_3:56240101-56240120 None:intergenic 45.0%
TGCCGATCAAGCAAATCAAG+TGG - chr1_3:56240170-56240189 None:intergenic 45.0%
TGCTTGATCGGCAGAAAGTA+AGG + chr1_3:56240177-56240196 Msa0127020:CDS 45.0%
GAGATGGAGGTAGATTCTGA+AGG + chr1_3:56240251-56240270 Msa0127020:CDS 45.0%
GTTTGATTATCCGGGAGGAA+AGG + chr1_3:56240276-56240295 Msa0127020:CDS 45.0%
GCATCATATTCTGAATCGGC+TGG - chr1_3:56240320-56240339 None:intergenic 45.0%
AGTCATTTGTCTGCAAGGTC+CGG + chr1_3:56240356-56240375 Msa0127020:CDS 45.0%
!! TGCTGTTCTTCTCCGCTTTT+GGG - chr1_3:56240390-56240409 None:intergenic 45.0%
CATAGGGCTGCTGCAAAAAA+AGG + chr1_3:56240551-56240570 Msa0127020:CDS 45.0%
GGCTGCTGCAAAAAAAGGTA+TGG + chr1_3:56240556-56240575 Msa0127020:CDS 45.0%
GTAGCAGATTGATAGAGCCA+TGG + chr1_3:56240694-56240713 Msa0127020:three_prime_UTR 45.0%
CAATAACGCAGTCTTGAAGC+TGG - chr1_3:56240828-56240847 None:intergenic 45.0%
!!! TTCAAATTATTTTAATATTT+TGG + chr1_3:56234744-56234763 Msa0127020:intron 5.0%
!! GCAGAGGTGTTGGTGGTTAA+CGG - chr1_3:56229689-56229708 None:intergenic 50.0%
TTGCGCCGAAATATGCGACT+GGG - chr1_3:56229765-56229784 None:intergenic 50.0%
GATTAGGTTCCGGTACGATG+CGG - chr1_3:56229804-56229823 None:intergenic 50.0%
!! TGGTCAGGTGGATTAGGTTC+CGG - chr1_3:56229814-56229833 None:intergenic 50.0%
! ATGACGTGGTCAGGTGGATT+AGG - chr1_3:56229820-56229839 None:intergenic 50.0%
CTCTCCGAATTCTTCGACGA+CGG - chr1_3:56229952-56229971 None:intergenic 50.0%
! TGTTGTGGACTGTTGGGGTA+AGG + chr1_3:56230631-56230650 Msa0127020:intron 50.0%
! GTTGTGGACTGTTGGGGTAA+GGG + chr1_3:56230632-56230651 Msa0127020:intron 50.0%
! TTGTGGACTGTTGGGGTAAG+GGG + chr1_3:56230633-56230652 Msa0127020:intron 50.0%
GGTGGAGCAAATGCAAATGC+TGG + chr1_3:56230862-56230881 Msa0127020:CDS 50.0%
CCATTATGCGCCTAGTGACT+AGG - chr1_3:56231020-56231039 None:intergenic 50.0%
CCTAGTCACTAGGCGCATAA+TGG + chr1_3:56231017-56231036 Msa0127020:CDS 50.0%
CACCTCAAGTAGTGCTTCAG+AGG - chr1_3:56231085-56231104 None:intergenic 50.0%
GGGAGTGGATCAGATAACTC+TGG + chr1_3:56231451-56231470 Msa0127020:CDS 50.0%
TTGCAACAAGGGCTGATCCA+AGG - chr1_3:56232652-56232671 None:intergenic 50.0%
TGGATCAGCCCTTGTTGCAA+TGG + chr1_3:56232652-56232671 Msa0127020:CDS 50.0%
GGATCAGCCCTTGTTGCAAT+GGG + chr1_3:56232653-56232672 Msa0127020:CDS 50.0%
AGGGACTGACAGTGTCATCA+AGG + chr1_3:56232936-56232955 Msa0127020:CDS 50.0%
! TTTCTTTTCATCCCAGGGCG+CGG + chr1_3:56234436-56234455 Msa0127020:intron 50.0%
AGCCAGCATTGCAGGTTTGT+TGG + chr1_3:56234532-56234551 Msa0127020:intron 50.0%
CTCCAACAAACCTGCAATGC+TGG - chr1_3:56234537-56234556 None:intergenic 50.0%
TCGAAGCTTGAGGTTCTGCT+TGG + chr1_3:56234926-56234945 Msa0127020:CDS 50.0%
CGAAGCTTGAGGTTCTGCTT+GGG + chr1_3:56234927-56234946 Msa0127020:CDS 50.0%
TGAGGTTCTGCTTGGGCTTA+TGG + chr1_3:56234934-56234953 Msa0127020:CDS 50.0%
CGTTTGGCAGAAGAATGGCA+AGG - chr1_3:56234971-56234990 None:intergenic 50.0%
ACTCCATGTCATGAAGTCCG+AGG + chr1_3:56235021-56235040 Msa0127020:CDS 50.0%
CTGCCGACAGGATGATTCAA+TGG + chr1_3:56235249-56235268 Msa0127020:intron 50.0%
GACAGGATGATTCAATGGCC+TGG + chr1_3:56235254-56235273 Msa0127020:intron 50.0%
AGTGAGGAAAACTTCTGGCC+AGG - chr1_3:56235275-56235294 None:intergenic 50.0%
!!! TGGCTCTGCTCGGTTTTTTC+TGG + chr1_3:56235416-56235435 Msa0127020:intron 50.0%
ACATGGCAGCAACAGGTTCA+AGG - chr1_3:56235638-56235657 None:intergenic 50.0%
! TCTGATACGTAACGGGATGG+GGG - chr1_3:56235938-56235957 None:intergenic 50.0%
! CTCTGATACGTAACGGGATG+GGG - chr1_3:56235939-56235958 None:intergenic 50.0%
! GCTCTGATACGTAACGGGAT+GGG - chr1_3:56235940-56235959 None:intergenic 50.0%
! TGCTCTGATACGTAACGGGA+TGG - chr1_3:56235941-56235960 None:intergenic 50.0%
! TGGACTCTCAGTTGGTGTCT+AGG - chr1_3:56235964-56235983 None:intergenic 50.0%
GTATATGTTGCCTCGACCGT+GGG - chr1_3:56236024-56236043 None:intergenic 50.0%
CGAGGCAACATATACGCAGA+AGG + chr1_3:56236029-56236048 Msa0127020:intron 50.0%
GGGAGCTTGATGCTCTGTAT+TGG - chr1_3:56236334-56236353 None:intergenic 50.0%
CTCAAGACTACACGTGCGAA+AGG + chr1_3:56236836-56236855 Msa0127020:intron 50.0%
! GGATCGCATCGGGACAATTT+TGG + chr1_3:56236857-56236876 Msa0127020:intron 50.0%
GCGAGCAAAGTGTGCATTCT+GGG + chr1_3:56236927-56236946 Msa0127020:intron 50.0%
GCCACTGCGAGTAAATACGT+AGG - chr1_3:56236955-56236974 None:intergenic 50.0%
GCGAGCGATGAATGTCAGTA+CGG + chr1_3:56237091-56237110 Msa0127020:intron 50.0%
TGAAATCGCAGTTCTCCCTC+TGG + chr1_3:56237378-56237397 Msa0127020:intron 50.0%
TGCTGACCTGTACTCTTCTG+AGG + chr1_3:56237883-56237902 Msa0127020:intron 50.0%
GGCCATTGTTGTGTTTGCTC+TGG + chr1_3:56238048-56238067 Msa0127020:intron 50.0%
CTCCTCGTCTCCAAATGCAT+GGG - chr1_3:56238289-56238308 None:intergenic 50.0%
TCTCCTCGTCTCCAAATGCA+TGG - chr1_3:56238290-56238309 None:intergenic 50.0%
GCATTTGGAGACGAGGAGAA+AGG + chr1_3:56238291-56238310 Msa0127020:CDS 50.0%
TTTGGAGACGAGGAGAAAGG+TGG + chr1_3:56238294-56238313 Msa0127020:CDS 50.0%
TTGGAGACGAGGAGAAAGGT+GGG + chr1_3:56238295-56238314 Msa0127020:CDS 50.0%
! TTGTGAGCTTAGGTTGCTCG+CGG + chr1_3:56238448-56238467 Msa0127020:intron 50.0%
! CGTCAAAGGTTTAGCTCGCT+TGG + chr1_3:56238507-56238526 Msa0127020:CDS 50.0%
TTCTCCGTGTAGGCCAATCT+TGG + chr1_3:56238705-56238724 Msa0127020:intron 50.0%
GCAAATGCATCTGAAGAGCG+TGG + chr1_3:56238770-56238789 Msa0127020:CDS 50.0%
GGGATGCTTATCACGAAGTG+TGG + chr1_3:56238975-56238994 Msa0127020:CDS 50.0%
AGATCAAGGAGCGGAAAGAG+AGG + chr1_3:56239134-56239153 Msa0127020:intron 50.0%
TGCAGAATACCTGAACGGCA+AGG + chr1_3:56239770-56239789 Msa0127020:CDS 50.0%
! CGGCAAGGCAATTTCTAGAG+GGG + chr1_3:56239785-56239804 Msa0127020:CDS 50.0%
! GGCAAGGCAATTTCTAGAGG+GGG + chr1_3:56239786-56239805 Msa0127020:CDS 50.0%
GATTCGTCAGACAAGTGCTC+AGG - chr1_3:56240137-56240156 None:intergenic 50.0%
CATCTCATCATCGTCTGACC+TGG - chr1_3:56240237-56240256 None:intergenic 50.0%
CAGGTCAGACGATGATGAGA+TGG + chr1_3:56240235-56240254 Msa0127020:CDS 50.0%
GTCAGACGATGATGAGATGG+AGG + chr1_3:56240238-56240257 Msa0127020:CDS 50.0%
AGGACGTTTGATTATCCGGG+AGG + chr1_3:56240271-56240290 Msa0127020:CDS 50.0%
!! CCGCTTTTGGGCTTTAGTTC+CGG - chr1_3:56240378-56240397 None:intergenic 50.0%
CCGGAACTAAAGCCCAAAAG+CGG + chr1_3:56240375-56240394 Msa0127020:CDS 50.0%
! CTGCTGTTCTTCTCCGCTTT+TGG - chr1_3:56240391-56240410 None:intergenic 50.0%
AAGAACAGCAGAGCCTGGTA+GGG + chr1_3:56240400-56240419 Msa0127020:CDS 50.0%
TGGTAGGGCTTACACTGGAA+AGG + chr1_3:56240424-56240443 Msa0127020:CDS 50.0%
TTTGCAGCAGCCCTATGTTG+TGG - chr1_3:56240548-56240567 None:intergenic 50.0%
! CTTCATAGAAAGCACGCCAG+AGG - chr1_3:56240624-56240643 None:intergenic 50.0%
TCTATAAACCCTTGCCGCCG+TGG + chr1_3:56229520-56229539 Msa0127020:five_prime_UTR 55.0%
CTATAAACCCTTGCCGCCGT+GGG + chr1_3:56229521-56229540 Msa0127020:five_prime_UTR 55.0%
!! CTAGCTAGCTCTAGCTCCCA+CGG - chr1_3:56229540-56229559 None:intergenic 55.0%
GAGCTAGAGCTAGCTAGCCA+GGG + chr1_3:56229543-56229562 Msa0127020:five_prime_UTR 55.0%
!! GAGGTGTTGGTGGTTAACGG+CGG - chr1_3:56229686-56229705 None:intergenic 55.0%
CAACACCTCTGCACCGTCAT+CGG + chr1_3:56229697-56229716 Msa0127020:CDS 55.0%
! CTGTGACATTGCGCCGATGA+CGG - chr1_3:56229713-56229732 None:intergenic 55.0%
TGCGCCGAAATATGCGACTG+GGG - chr1_3:56229764-56229783 None:intergenic 55.0%
GTTGCGCCGAAATATGCGAC+TGG - chr1_3:56229766-56229785 None:intergenic 55.0%
CTCCTTGAACCGCATCGTAC+CGG + chr1_3:56229792-56229811 Msa0127020:CDS 55.0%
TTCCGGTACGATGCGGTTCA+AGG - chr1_3:56229797-56229816 None:intergenic 55.0%
GATTCGATGACGTGGTCAGG+TGG - chr1_3:56229826-56229845 None:intergenic 55.0%
AGCGATTCGATGACGTGGTC+AGG - chr1_3:56229829-56229848 None:intergenic 55.0%
GCCCGTAGCTGTGTTGAAGA+AGG + chr1_3:56229882-56229901 Msa0127020:CDS 55.0%
TGGGGTAAGGGGATGTAGCA+TGG + chr1_3:56230644-56230663 Msa0127020:intron 55.0%
GACATCACGGAGGCCCAAAT+GGG - chr1_3:56230758-56230777 None:intergenic 55.0%
AGACATCACGGAGGCCCAAA+TGG - chr1_3:56230759-56230778 None:intergenic 55.0%
AGGAACTAAGGGAGCCCAAC+AGG + chr1_3:56230888-56230907 Msa0127020:CDS 55.0%
TGCGTCAACCCCTAGTCACT+AGG + chr1_3:56231007-56231026 Msa0127020:CDS 55.0%
ACTGCTCGCTTGCTTGATGC+TGG + chr1_3:56231168-56231187 Msa0127020:CDS 55.0%
GTGCAGCTTCATACGTGCCT+TGG + chr1_3:56232632-56232651 Msa0127020:intron 55.0%
AAATCAAGAAGCCGCGCCCT+GGG - chr1_3:56234450-56234469 None:intergenic 55.0%
CTGCCTCGGACTTCATGACA+TGG - chr1_3:56235027-56235046 None:intergenic 55.0%
CGAGCCTTCATGAGCCTAAC+CGG + chr1_3:56235515-56235534 Msa0127020:intron 55.0%
GAGCCTTCATGAGCCTAACC+GGG + chr1_3:56235516-56235535 Msa0127020:intron 55.0%
GTTCCCGGTTAGGCTCATGA+AGG - chr1_3:56235522-56235541 None:intergenic 55.0%
CGTATATGTTGCCTCGACCG+TGG - chr1_3:56236025-56236044 None:intergenic 55.0%
CACGTGCGAAAGGATCGCAT+CGG + chr1_3:56236846-56236865 Msa0127020:intron 55.0%
ACGTGCGAAAGGATCGCATC+GGG + chr1_3:56236847-56236866 Msa0127020:intron 55.0%
GCGAGTAACTTCACTCGCAC+TGG + chr1_3:56236905-56236924 Msa0127020:intron 55.0%
GGCGAGCAAAGTGTGCATTC+TGG + chr1_3:56236926-56236945 Msa0127020:intron 55.0%
TTGCTCGCAGTTGCGAGTTC+TGG + chr1_3:56237030-56237049 Msa0127020:intron 55.0%
TGCTCGCAGTTGCGAGTTCT+GGG + chr1_3:56237031-56237050 Msa0127020:intron 55.0%
ATGCGAGTGTTCTTGCTCGC+AGG + chr1_3:56237067-56237086 Msa0127020:intron 55.0%
GTCGAAGTCGCCCATGCATT+TGG + chr1_3:56238276-56238295 Msa0127020:CDS 55.0%
GAAGAACAGCAGAGCCTGGT+AGG + chr1_3:56240399-56240418 Msa0127020:CDS 55.0%
TGAGTCGTCGGCCACAACAT+AGG + chr1_3:56240534-56240553 Msa0127020:CDS 55.0%
GAGTCGTCGGCCACAACATA+GGG + chr1_3:56240535-56240554 Msa0127020:CDS 55.0%
!! CTTGAAGGCAAGAGTGCCTC+TGG + chr1_3:56240605-56240624 Msa0127020:CDS 55.0%
GGAGCTAGAGCTAGCTAGCC+AGG + chr1_3:56229542-56229561 Msa0127020:five_prime_UTR 60.0%
!! GTGTTGGTGGTTAACGGCGG+TGG - chr1_3:56229683-56229702 None:intergenic 60.0%
!! TGACGGTGCAGAGGTGTTGG+TGG - chr1_3:56229696-56229715 None:intergenic 60.0%
! CGATGACGGTGCAGAGGTGT+TGG - chr1_3:56229699-56229718 None:intergenic 60.0%
CGTCATCGGCGCAATGTCAC+AGG + chr1_3:56229711-56229730 Msa0127020:CDS 60.0%
CTGGGGAAGAAGGGAGGTTG+TGG - chr1_3:56229747-56229766 None:intergenic 60.0%
ATGCGACTGGGGAAGAAGGG+AGG - chr1_3:56229753-56229772 None:intergenic 60.0%
CGGTACGATGCGGTTCAAGG+AGG - chr1_3:56229794-56229813 None:intergenic 60.0%
GAAATCAAGAAGCCGCGCCC+TGG - chr1_3:56234451-56234470 None:intergenic 60.0%
! TAGGTTTGGGGGTGGGCTCT+AGG + chr1_3:56235489-56235508 Msa0127020:intron 60.0%
CTCGACCGTGGGTAATGTGC+AGG - chr1_3:56236013-56236032 None:intergenic 60.0%
CTGCACATTACCCACGGTCG+AGG + chr1_3:56236011-56236030 Msa0127020:intron 60.0%
TTGGTGAGGGCTTGATGCCC+TGG - chr1_3:56236424-56236443 None:intergenic 60.0%
TGGTTGAGGGCTTGATGCCC+TGG - chr1_3:56236468-56236487 None:intergenic 60.0%
CGCCCATGCATTTGGAGACG+AGG + chr1_3:56238284-56238303 Msa0127020:CDS 60.0%
! TAGGTTGCTCGCGGCCTTGT+TGG + chr1_3:56238457-56238476 Msa0127020:intron 60.0%
GAGCGGAAAGAGAGGAACCG+AGG + chr1_3:56239142-56239161 Msa0127020:CDS 60.0%
CCGTCTGTTCCCTTTCCTCC+CGG - chr1_3:56240289-56240308 None:intergenic 60.0%
CCGGGAGGAAAGGGAACAGA+CGG + chr1_3:56240286-56240305 Msa0127020:CDS 60.0%
GGAGGAAAGGGAACAGACGG+AGG + chr1_3:56240289-56240308 Msa0127020:CDS 60.0%
CGGAGAAGAACAGCAGAGCC+TGG + chr1_3:56240395-56240414 Msa0127020:CDS 60.0%
! AGAGCCTGGTAGGGCTGGTA+GGG + chr1_3:56240409-56240428 Msa0127020:CDS 60.0%
TAAGCCCTACCAGCCCTACC+AGG - chr1_3:56240416-56240435 None:intergenic 60.0%
! AGGGCTGGTAGGGCTTACAC+TGG + chr1_3:56240419-56240438 Msa0127020:CDS 60.0%
! TCTAGCTCCCACGGCGGCAA+GGG - chr1_3:56229531-56229550 None:intergenic 65.0%
!! GCTAGCTCTAGCTCCCACGG+CGG - chr1_3:56229537-56229556 None:intergenic 65.0%
! TTGCGCCGATGACGGTGCAG+AGG - chr1_3:56229705-56229724 None:intergenic 65.0%
GCTCGCAGTTGCGAGCTCAC+AGG + chr1_3:56236985-56237004 Msa0127020:intron 65.0%
ACAGCAGAGCCTGGTAGGGC+TGG + chr1_3:56240404-56240423 Msa0127020:CDS 65.0%
! CAGAGCCTGGTAGGGCTGGT+AGG + chr1_3:56240408-56240427 Msa0127020:CDS 65.0%
! CTCTAGCTCCCACGGCGGCA+AGG - chr1_3:56229532-56229551 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 56229488 56240905 56229488 ID=Msa0127020;Name=Msa0127020
chr1_3 mRNA 56229488 56240905 56229488 ID=Msa0127020-mRNA-1;Parent=Msa0127020;Name=Msa0127020-mRNA-1;_AED=0.08;_eAED=0.08;_QI=104|1|1|1|1|1|18|217|1288
chr1_3 exon 56229488 56230095 56229488 ID=Msa0127020-mRNA-1:exon:17645;Parent=Msa0127020-mRNA-1
chr1_3 exon 56230742 56231264 56230742 ID=Msa0127020-mRNA-1:exon:17646;Parent=Msa0127020-mRNA-1
chr1_3 exon 56231354 56231605 56231354 ID=Msa0127020-mRNA-1:exon:17647;Parent=Msa0127020-mRNA-1
chr1_3 exon 56231915 56232006 56231915 ID=Msa0127020-mRNA-1:exon:17648;Parent=Msa0127020-mRNA-1
chr1_3 exon 56232638 56232847 56232638 ID=Msa0127020-mRNA-1:exon:17649;Parent=Msa0127020-mRNA-1
chr1_3 exon 56232926 56233327 56232926 ID=Msa0127020-mRNA-1:exon:17650;Parent=Msa0127020-mRNA-1
chr1_3 exon 56234131 56234300 56234131 ID=Msa0127020-mRNA-1:exon:17651;Parent=Msa0127020-mRNA-1
chr1_3 exon 56234452 56234545 56234452 ID=Msa0127020-mRNA-1:exon:17652;Parent=Msa0127020-mRNA-1
chr1_3 exon 56234642 56234695 56234642 ID=Msa0127020-mRNA-1:exon:17653;Parent=Msa0127020-mRNA-1
chr1_3 exon 56234905 56235096 56234905 ID=Msa0127020-mRNA-1:exon:17654;Parent=Msa0127020-mRNA-1
chr1_3 exon 56235259 56235318 56235259 ID=Msa0127020-mRNA-1:exon:17655;Parent=Msa0127020-mRNA-1
chr1_3 exon 56238237 56238350 56238237 ID=Msa0127020-mRNA-1:exon:17656;Parent=Msa0127020-mRNA-1
chr1_3 exon 56238460 56238621 56238460 ID=Msa0127020-mRNA-1:exon:17657;Parent=Msa0127020-mRNA-1
chr1_3 exon 56238717 56238845 56238717 ID=Msa0127020-mRNA-1:exon:17658;Parent=Msa0127020-mRNA-1
chr1_3 exon 56238960 56239061 56238960 ID=Msa0127020-mRNA-1:exon:17659;Parent=Msa0127020-mRNA-1
chr1_3 exon 56239136 56239215 56239136 ID=Msa0127020-mRNA-1:exon:17660;Parent=Msa0127020-mRNA-1
chr1_3 exon 56239707 56239850 56239707 ID=Msa0127020-mRNA-1:exon:17661;Parent=Msa0127020-mRNA-1
chr1_3 exon 56240106 56240905 56240106 ID=Msa0127020-mRNA-1:exon:17662;Parent=Msa0127020-mRNA-1
chr1_3 five_prime_UTR 56229488 56229591 56229488 ID=Msa0127020-mRNA-1:five_prime_utr;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56229592 56230095 56229592 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56230742 56231264 56230742 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56231354 56231605 56231354 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56231915 56232006 56231915 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56232638 56232847 56232638 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56232926 56233327 56232926 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56234131 56234300 56234131 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56234452 56234545 56234452 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56234642 56234695 56234642 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56234905 56235096 56234905 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56235259 56235318 56235259 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56238237 56238350 56238237 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56238460 56238621 56238460 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56238717 56238845 56238717 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56238960 56239061 56238960 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56239136 56239215 56239136 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56239707 56239850 56239707 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 CDS 56240106 56240688 56240106 ID=Msa0127020-mRNA-1:cds;Parent=Msa0127020-mRNA-1
chr1_3 three_prime_UTR 56240689 56240905 56240689 ID=Msa0127020-mRNA-1:three_prime_utr;Parent=Msa0127020-mRNA-1
Gene Sequence

>Msa0127020

ATGGAAGGAATCGAAATGGAGCAACCAACATTCAACAACGAATCCAACGATGACATATGCAATTCAATTCTCTCTCGTTTTTCAAAATCCACCGCCGTTAACCACCAACACCTCTGCACCGTCATCGGCGCAATGTCACAGGAACTCAAAGACCACAACCTCCCTTCTTCCCCAGTCGCATATTTCGGCGCAACGTGCTCCTCCTTGAACCGCATCGTACCGGAACCTAATCCACCTGACCACGTCATCGAATCGCTTTTAACGATTCTCTCGATTGTTATCGTTAAAGTGCCCGTAGCTGTGTTGAAGAAGGAGAGAGAGTCTTTGTCTGAGCTTATTGTGAAACTTATTCATTCTCCGTCGTCGAAGAATTCGGAGAGTATCGTTGTTGATGGATTGAAGTGTGTTTCGCATTTGTTGATTCATAGGGATAGTGTTCATTGGTCTGATGTGTCGACGTTGTTCAATCTTTTGCTGGGGTTTCTTACTGATTCAAGACCGAAGGTAAGAAGGCAATCCCATTTGGGCCTCCGTGATGTCTTGATAAACTTTCAAAAGTCTTCACTATTAGCATCTGCGAGTGAAGGTGTCAAAAACCTACTTGAAAGGTTTTTACTGCTTGCTGGTGGAGCAAATGCAAATGCTGGTGAAGGAACTAAGGGAGCCCAACAGGTTTTGTATGTTCTTGATGCCTTGAAAGAATGCCTACCTTTGTTGTCACTAAAAGACAAGAACAGCATTCTCAAGCACTTCAAAACTCTATTGAATCTGCGTCAACCCCTAGTCACTAGGCGCATAATGGATGCTTTGAATTTTATCTGTCTTAACTCAACATCAGAAGTTTCCTCTGAAGCACTACTTGAGGTGTTGTGCACATTATCGGCTCTTTCTACCTCATCAAATGAGATTTCTGGAGATGGCATGACATTTACTGCTCGCTTGCTTGATGCTGGAATGAAGAAAGTTTTTTCTCTGAACAGGCAAATGTGTGTAATTAAGCTTCCCAGTGTTTTCAGTGATCTCAAAGATATTTTGGCATCTGAACATGAAGAGGCCATATTCGCAGTCACAGATGCACTCAAAAGCATGATCAATTATTGCATTGATGAGAGTTTGATTAAACAGGGAGTGGATCAGATAACTCTGGATGAATCAAGGAGATCAGGACCAACCATTATTGAGAAAATTTGTGCAACTGTTGAGAGCTTACTTGATTATCACTATGCTGCTGCCTGGGACAGAGTTTTTGATGTTGTTTCCGCAATGTTTCACAAATTAGGAAGTAACTCTCCTTACTTTATGAGAGGTATACTCAAAAACTTGGAAGATATGCAGAAGCTGCCTGATGAAGATTTTCCCTTTAGGAAACAGCTTCATACGTGCCTTGGATCAGCCCTTGTTGCAATGGGACCTGAAACTTTCTTATCCTTTATACCATTGAATTTGGAAGCTGAAGATTTATCTGTGTCAAATATATGGCTTTTTCCCATTTTAAAACAGCATATTGTTGGTGCACATCTAAAATATTTTACCGACGAAATTTTGCCTATGATTGGACGTATTAGGGAGAAGGCTCAAAAGCTTGAGAAGCAGGGACTGACAGTGTCATCAAGGAATGCAGACGCACTTGCTTACTCTTTGTGGTCTTTACTGCCTTCATTTTGTAACTATCCTTCAGACACAGCTAAAAGCTTCAAGGATCTAGAGAGACATTTACGTAGTACACTAAAAGAAGAACCTGATATTCGTGGAATAATATGCACTAGCTTGCAGCTTCTGATTAGACAAAACAAGAACATAAAGGACTCAAATGATAAAGATGATATTGGGCAAGATATGGCCAAAGAACAAGTCTTGGTTAATTACTCGCAACAGGTTGCAACAGAAAATTTGAGGGCATTGGAGATATCTGCCAAGAACTTGTTGAAAGATCTGTCAGACGTGTTCCTGAAATCTACAAAAGATGATGGTGGTTGTTTGCAGGGCACAATTAGTGACATTGCTTCTATAGCAGAAAAGAAAGTCGTACAAAACTTATTTAAGAAGAAGATGTCAGACCTCTTAAAATGTACTCAAAATGCCAACAGAATAGATGGTTCAGACAGCTCTATGCAGATTGATGCATCAAATGATGAATCTCAATCAGTTCTCAGGGCGCGGCTTCTTGATTTCGCAGTTTCATTGTTGCGTGGATTAGATACAAAAGATATTGATTTATTATTTCAAGTATTAAAGCCAGCATTGCAGGATGTTGGTGTCATGCAGAAGAAGGCATACAAAGTTCTCTCGATCATACTCAGGAGCTCGGATAGTTTTGTTTCATCGAAGCTTGAGGTTCTGCTTGGGCTTATGGTTGAAATTCTTCCTTGCCATTCTTCTGCCAAACGCCATAGACTTGATTGCCTTTACTTTTTGATACTCCATGTCATGAAGTCCGAGGCAGTCAAAGTTGAGTTCCTTTACTTCTTAACAGTCCAAGACTCGAAATCAAAGGATGATTCAATGGCCTGGCCAGAAGTTTTCCTCACTGAGATAATACTGGCTCTTAAAGAGGCTAATAAGAAAACCAGGAACAGGGCTTATGACATTCTGGTCGAAGTCGCCCATGCATTTGGAGACGAGGAGAAAGGTGGGAACAGAAATAACCTCTATCAATTTTTTATCAAGGTTGCTCGCGGCCTTGTTGGAAAAACTCCACATATGATAAGTGCAACCGTCAAAGGTTTAGCTCGCTTGGCCTATGAATTCTCTGACCTTGCTTTAACTGCTTTTGATTTGCTTCCATCTACATTTGTCCTGCTCGAAAAAAAGAATAAAGAGATAACCAAGGCCAATCTTGGTTTATTAAAGGTTTTAGTAGCCAAATCACAAGCAGAAGGATTGCAAATGCATCTGAAGAGCGTGGTTGAGTGTTTGTTTCAGTGGCAAGATGAAGCCAAAAATCATTTTAAAGCAAAGGTCAAACTTCTTTTAGGGATGCTTATCACGAAGTGTGGATTGGAGGCTGTTAAAGCTGTCCTGCCTGAAGAACATATAAAACTTCTGACCAACATACGCAAGATCAAGGAGCGGAAAGAGAGGAACCGAGGTGCTAAATCTGAAGAAACCAGGTCTCATGTTTCAAAAGCAACTACATCCAGGAAAAGTAGATGGAACCATACTGATATTTTTTCGGAGTTTGATGGAGACAGCAAAGGTAGTGATGCAGAATACCTGAACGGCAAGGCAATTTCTAGAGGGGGTAAATCTTCCACACATCTCAAATCAGCAGCATCGTCATTCAGGTCCAAGATGAGACTAAAAAACAATATTCCTGAGCACTTGTCTGACGAATCAGATGACGAGCCACTTGATTTGCTTGATCGGCAGAAAGTAAGGTCTGCTCTTAGATCTGAGAATCTCAAAAGGAAGTCCAGGTCAGACGATGATGAGATGGAGGTAGATTCTGAAGGACGTTTGATTATCCGGGAGGAAAGGGAACAGACGGAGGAAAAACCAGCCGATTCAGAATATGATGCTAGGAGTGAGCCTGATAGTCATTTGTCTGCAAGGTCCGGAACTAAAGCCCAAAAGCGGAGAAGAACAGCAGAGCCTGGTAGGGCTGGTAGGGCTTACACTGGAAAGGAATATGCTAGCAAAAAAGCTGGTGGAGATATTAAGAGGAAGGATAAGCTTGAACCTTATGCATATTGGCCACTTGATCGAAAAATGATGAGTCGTCGGCCACAACATAGGGCTGCTGCAAAAAAAGGTATGGCTACTGTGGTAAATATGACAAAAAGGCTTGAAGGCAAGAGTGCCTCTGGCGTGCTTTCTATGAAGAGTATGAAACTAAAAAGAACTCAAAAGAAAGGTAGCAAGCAATAG
Protein sequence

>Msa0127020

MEGIEMEQPTFNNESNDDICNSILSRFSKSTAVNHQHLCTVIGAMSQELKDHNLPSSPVAYFGATCSSLNRIVPEPNPPDHVIESLLTILSIVIVKVPVAVLKKERESLSELIVKLIHSPSSKNSESIVVDGLKCVSHLLIHRDSVHWSDVSTLFNLLLGFLTDSRPKVRRQSHLGLRDVLINFQKSSLLASASEGVKNLLERFLLLAGGANANAGEGTKGAQQVLYVLDALKECLPLLSLKDKNSILKHFKTLLNLRQPLVTRRIMDALNFICLNSTSEVSSEALLEVLCTLSALSTSSNEISGDGMTFTARLLDAGMKKVFSLNRQMCVIKLPSVFSDLKDILASEHEEAIFAVTDALKSMINYCIDESLIKQGVDQITLDESRRSGPTIIEKICATVESLLDYHYAAAWDRVFDVVSAMFHKLGSNSPYFMRGILKNLEDMQKLPDEDFPFRKQLHTCLGSALVAMGPETFLSFIPLNLEAEDLSVSNIWLFPILKQHIVGAHLKYFTDEILPMIGRIREKAQKLEKQGLTVSSRNADALAYSLWSLLPSFCNYPSDTAKSFKDLERHLRSTLKEEPDIRGIICTSLQLLIRQNKNIKDSNDKDDIGQDMAKEQVLVNYSQQVATENLRALEISAKNLLKDLSDVFLKSTKDDGGCLQGTISDIASIAEKKVVQNLFKKKMSDLLKCTQNANRIDGSDSSMQIDASNDESQSVLRARLLDFAVSLLRGLDTKDIDLLFQVLKPALQDVGVMQKKAYKVLSIILRSSDSFVSSKLEVLLGLMVEILPCHSSAKRHRLDCLYFLILHVMKSEAVKVEFLYFLTVQDSKSKDDSMAWPEVFLTEIILALKEANKKTRNRAYDILVEVAHAFGDEEKGGNRNNLYQFFIKVARGLVGKTPHMISATVKGLARLAYEFSDLALTAFDLLPSTFVLLEKKNKEITKANLGLLKVLVAKSQAEGLQMHLKSVVECLFQWQDEAKNHFKAKVKLLLGMLITKCGLEAVKAVLPEEHIKLLTNIRKIKERKERNRGAKSEETRSHVSKATTSRKSRWNHTDIFSEFDGDSKGSDAEYLNGKAISRGGKSSTHLKSAASSFRSKMRLKNNIPEHLSDESDDEPLDLLDRQKVRSALRSENLKRKSRSDDDEMEVDSEGRLIIREEREQTEEKPADSEYDARSEPDSHLSARSGTKAQKRRRTAEPGRAGRAYTGKEYASKKAGGDIKRKDKLEPYAYWPLDRKMMSRRPQHRAAAKKGMATVVNMTKRLEGKSASGVLSMKSMKLKRTQKKGSKQ*