Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294070 | sp|P40620|HMGL_VICFA | 85.897 | 78 | 11 | 0 | 15 | 92 | 57 | 134 | 3.34e-42 | 138 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294070 | B7FN80 | 75.887 | 141 | 0 | 1 | 1 | 107 | 1 | 141 | 2.44e-60 | 190 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1294070 | TR | HMG |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011960 | Msa1294070 | 0.857989 | 1.120923e-62 | -8.615850e-47 |
| Msa0023000 | Msa1294070 | 0.800049 | 1.729241e-48 | -8.615850e-47 |
| Msa0025730 | Msa1294070 | 0.809325 | 2.001177e-50 | -8.615850e-47 |
| Msa0027770 | Msa1294070 | 0.812501 | 4.106627e-51 | -8.615850e-47 |
| Msa0028660 | Msa1294070 | 0.802232 | 6.184964e-49 | -8.615850e-47 |
| Msa0032580 | Msa1294070 | 0.827737 | 1.326242e-54 | -8.615850e-47 |
| Msa0033950 | Msa1294070 | 0.806739 | 7.107095e-50 | -8.615850e-47 |
| Msa0034030 | Msa1294070 | 0.808269 | 3.365090e-50 | -8.615850e-47 |
| Msa0043660 | Msa1294070 | 0.845302 | 4.420324e-59 | -8.615850e-47 |
| Msa0047160 | Msa1294070 | 0.807716 | 4.411330e-50 | -8.615850e-47 |
| Msa0051750 | Msa1294070 | 0.800695 | 1.277591e-48 | -8.615850e-47 |
| Msa0054440 | Msa1294070 | 0.850796 | 1.346887e-60 | -8.615850e-47 |
| Msa0054480 | Msa1294070 | 0.831705 | 1.434590e-55 | -8.615850e-47 |
| Msa0057140 | Msa1294070 | 0.819637 | 1.046141e-52 | -8.615850e-47 |
| Msa0061080 | Msa1294070 | 0.824287 | 8.759125e-54 | -8.615850e-47 |
| Msa0065950 | Msa1294070 | 0.804464 | 2.133094e-49 | -8.615850e-47 |
| Msa0075500 | Msa1294070 | 0.846216 | 2.496993e-59 | -8.615850e-47 |
| Msa0079180 | Msa1294070 | 0.802136 | 6.474994e-49 | -8.615850e-47 |
| Msa0084940 | Msa1294070 | 0.817314 | 3.516010e-52 | -8.615850e-47 |
| Msa0086180 | Msa1294070 | 0.804401 | 2.198887e-49 | -8.615850e-47 |
| Msa0094470 | Msa1294070 | 0.811361 | 7.276231e-51 | -8.615850e-47 |
| Msa0100740 | Msa1294070 | 0.803858 | 2.851548e-49 | -8.615850e-47 |
| Msa0105620 | Msa1294070 | 0.844988 | 5.372947e-59 | -8.615850e-47 |
| Msa0603670 | Msa1294070 | 0.805000 | 1.648642e-49 | -8.615850e-47 |
| Msa0605000 | Msa1294070 | 0.833487 | 5.184390e-56 | -8.615850e-47 |
| Msa0607050 | Msa1294070 | 0.806911 | 6.537094e-50 | -8.615850e-47 |
| Msa0610390 | Msa1294070 | 0.800706 | 1.270805e-48 | -8.615850e-47 |
| Msa0610430 | Msa1294070 | 0.811763 | 5.948388e-51 | -8.615850e-47 |
| Msa0617640 | Msa1294070 | 0.808406 | 3.146561e-50 | -8.615850e-47 |
| Msa0625720 | Msa1294070 | 0.818323 | 2.080947e-52 | -8.615850e-47 |
| Msa0647500 | Msa1294070 | 0.831866 | 1.309546e-55 | -8.615850e-47 |
| Msa0650920 | Msa1294070 | 0.802124 | 6.509828e-49 | -8.615850e-47 |
| Msa0663390 | Msa1294070 | 0.821856 | 3.231944e-53 | -8.615850e-47 |
| Msa0673460 | Msa1294070 | 0.801230 | 9.930987e-49 | -8.615850e-47 |
| Msa0673470 | Msa1294070 | 0.806866 | 6.681690e-50 | -8.615850e-47 |
| Msa0683600 | Msa1294070 | 0.809619 | 1.729985e-50 | -8.615850e-47 |
| Msa0685140 | Msa1294070 | 0.850715 | 1.419437e-60 | -8.615850e-47 |
| Msa0689260 | Msa1294070 | 0.838078 | 3.560280e-57 | -8.615850e-47 |
| Msa0690150 | Msa1294070 | 0.824018 | 1.013324e-53 | -8.615850e-47 |
| Msa0691290 | Msa1294070 | 0.824160 | 9.383879e-54 | -8.615850e-47 |
| Msa0692830 | Msa1294070 | 0.816392 | 5.661400e-52 | -8.615850e-47 |
| Msa0692940 | Msa1294070 | 0.822534 | 2.250553e-53 | -8.615850e-47 |
| Msa0692950 | Msa1294070 | 0.800209 | 1.604816e-48 | -8.615850e-47 |
| Msa0694840 | Msa1294070 | 0.808518 | 2.977003e-50 | -8.615850e-47 |
| Msa0696130 | Msa1294070 | 0.824978 | 6.020029e-54 | -8.615850e-47 |
| Msa0702370 | Msa1294070 | 0.801341 | 9.426226e-49 | -8.615850e-47 |
| Msa0702550 | Msa1294070 | 0.800935 | 1.140991e-48 | -8.615850e-47 |
| Msa0708610 | Msa1294070 | 0.801822 | 7.512342e-49 | -8.615850e-47 |
| Msa0709160 | Msa1294070 | 0.817937 | 2.544711e-52 | -8.615850e-47 |
| Msa0709500 | Msa1294070 | 0.824986 | 5.995411e-54 | -8.615850e-47 |
| Msa0711780 | Msa1294070 | 0.863888 | 1.804579e-64 | -8.615850e-47 |
| Msa0715650 | Msa1294070 | 0.833308 | 5.745036e-56 | -8.615850e-47 |
| Msa0715700 | Msa1294070 | 0.819595 | 1.069565e-52 | -8.615850e-47 |
| Msa0719420 | Msa1294070 | 0.827535 | 1.482574e-54 | -8.615850e-47 |
| Msa0726830 | Msa1294070 | 0.808444 | 3.088288e-50 | -8.615850e-47 |
| Msa0726860 | Msa1294070 | 0.800804 | 1.213618e-48 | -8.615850e-47 |
| Msa0737560 | Msa1294070 | 0.803263 | 3.789424e-49 | -8.615850e-47 |
| Msa0750430 | Msa1294070 | 0.813251 | 2.813549e-51 | -8.615850e-47 |
| Msa0753140 | Msa1294070 | 0.817270 | 3.598110e-52 | -8.615850e-47 |
| Msa0763330 | Msa1294070 | 0.818670 | 1.736685e-52 | -8.615850e-47 |
| Msa0772480 | Msa1294070 | 0.852266 | 5.168649e-61 | -8.615850e-47 |
| Msa0784380 | Msa1294070 | 0.809918 | 1.491993e-50 | -8.615850e-47 |
| Msa0789680 | Msa1294070 | 0.830986 | 2.155521e-55 | -8.615850e-47 |
| Msa0790850 | Msa1294070 | 0.825859 | 3.725512e-54 | -8.615850e-47 |
| Msa0793390 | Msa1294070 | 0.826361 | 2.829063e-54 | -8.615850e-47 |
| Msa0793800 | Msa1294070 | 0.808422 | 3.121346e-50 | -8.615850e-47 |
| Msa0794670 | Msa1294070 | 0.859330 | 4.455922e-63 | -8.615850e-47 |
| Msa0796260 | Msa1294070 | 0.800738 | 1.251870e-48 | -8.615850e-47 |
| Msa0798440 | Msa1294070 | 0.854895 | 9.074614e-62 | -8.615850e-47 |
| Msa0802410 | Msa1294070 | 0.849288 | 3.559819e-60 | -8.615850e-47 |
| Msa0805500 | Msa1294070 | 0.804962 | 1.679176e-49 | -8.615850e-47 |
| Msa0809770 | Msa1294070 | 0.816226 | 6.166622e-52 | -8.615850e-47 |
| Msa0816700 | Msa1294070 | 0.820218 | 7.704969e-53 | -8.615850e-47 |
| Msa0830540 | Msa1294070 | 0.873961 | 9.795615e-68 | -8.615850e-47 |
| Msa0831530 | Msa1294070 | 0.807709 | 4.428041e-50 | -8.615850e-47 |
| Msa0127020 | Msa1294070 | 0.831269 | 1.836869e-55 | -8.615850e-47 |
| Msa0128860 | Msa1294070 | 0.809476 | 1.857047e-50 | -8.615850e-47 |
| Msa0136070 | Msa1294070 | 0.805185 | 1.507914e-49 | -8.615850e-47 |
| Msa0137550 | Msa1294070 | 0.843778 | 1.136582e-58 | -8.615850e-47 |
| Msa0138020 | Msa1294070 | 0.801843 | 7.435189e-49 | -8.615850e-47 |
| Msa0144370 | Msa1294070 | 0.802440 | 5.603662e-49 | -8.615850e-47 |
| Msa0146770 | Msa1294070 | 0.829031 | 6.460910e-55 | -8.615850e-47 |
| Msa0150820 | Msa1294070 | 0.856969 | 2.244518e-62 | -8.615850e-47 |
| Msa0157100 | Msa1294070 | 0.801714 | 7.904422e-49 | -8.615850e-47 |
| Msa0159170 | Msa1294070 | 0.850342 | 1.807261e-60 | -8.615850e-47 |
| Msa0160550 | Msa1294070 | 0.805927 | 1.053930e-49 | -8.615850e-47 |
| Msa0165950 | Msa1294070 | 0.803489 | 3.402034e-49 | -8.615850e-47 |
| Msa0168230 | Msa1294070 | 0.832347 | 9.957734e-56 | -8.615850e-47 |
| Msa0169280 | Msa1294070 | 0.830599 | 2.682001e-55 | -8.615850e-47 |
| Msa0171540 | Msa1294070 | 0.805286 | 1.436583e-49 | -8.615850e-47 |
| Msa0172970 | Msa1294070 | 0.821216 | 4.542766e-53 | -8.615850e-47 |
| Msa0174730 | Msa1294070 | 0.809757 | 1.616348e-50 | -8.615850e-47 |
| Msa0187120 | Msa1294070 | 0.812046 | 5.163047e-51 | -8.615850e-47 |
| Msa0187490 | Msa1294070 | 0.804847 | 1.774611e-49 | -8.615850e-47 |
| Msa0189300 | Msa1294070 | 0.840768 | 7.128679e-58 | -8.615850e-47 |
| Msa0189520 | Msa1294070 | 0.828010 | 1.140023e-54 | -8.615850e-47 |
| Msa0217680 | Msa1294070 | 0.807443 | 5.042552e-50 | -8.615850e-47 |
| Msa0220720 | Msa1294070 | 0.818452 | 1.945453e-52 | -8.615850e-47 |
| Msa0222620 | Msa1294070 | 0.802324 | 5.920504e-49 | -8.615850e-47 |
| Msa0228070 | Msa1294070 | 0.805833 | 1.103051e-49 | -8.615850e-47 |
| Msa0231660 | Msa1294070 | 0.843757 | 1.151416e-58 | -8.615850e-47 |
| Msa1224810 | Msa1294070 | 0.845210 | 4.680442e-59 | -8.615850e-47 |
| Msa1228620 | Msa1294070 | -0.805746 | 1.150080e-49 | -8.615850e-47 |
| Msa1245930 | Msa1294070 | 0.836587 | 8.576316e-57 | -8.615850e-47 |
| Msa1253800 | Msa1294070 | 0.873812 | 1.099577e-67 | -8.615850e-47 |
| Msa1254510 | Msa1294070 | 0.815339 | 9.726964e-52 | -8.615850e-47 |
| Msa1255040 | Msa1294070 | -0.807738 | 4.365986e-50 | -8.615850e-47 |
| Msa1259060 | Msa1294070 | 0.841346 | 5.023629e-58 | -8.615850e-47 |
| Msa1265630 | Msa1294070 | 0.810796 | 9.647425e-51 | -8.615850e-47 |
| Msa1267520 | Msa1294070 | 0.804502 | 2.094751e-49 | -8.615850e-47 |
| Msa1276440 | Msa1294070 | 0.801653 | 8.135065e-49 | -8.615850e-47 |
| Msa1294070 | Msa1305190 | 0.810752 | 9.860168e-51 | -8.615850e-47 |
| Msa1294070 | Msa1305340 | 0.827818 | 1.267826e-54 | -8.615850e-47 |
| Msa1294070 | Msa1305710 | 0.814674 | 1.365905e-51 | -8.615850e-47 |
| Msa1294070 | Msa1306920 | 0.805534 | 1.274342e-49 | -8.615850e-47 |
| Msa1294070 | Msa1307180 | 0.800807 | 1.212039e-48 | -8.615850e-47 |
| Msa1294070 | Msa1340260 | 0.800130 | 1.664994e-48 | -8.615850e-47 |
| Msa1294070 | Msa1348560 | 0.800404 | 1.464350e-48 | -8.615850e-47 |
| Msa1294070 | Msa1355700 | 0.804023 | 2.635020e-49 | -8.615850e-47 |
| Msa1294070 | Msa1356440 | 0.817556 | 3.102354e-52 | -8.615850e-47 |
| Msa1294070 | Msa1357430 | 0.801088 | 1.062029e-48 | -8.615850e-47 |
| Msa1294070 | Msa1358250 | 0.839854 | 1.235188e-57 | -8.615850e-47 |
| Msa1294070 | Msa1364210 | 0.802147 | 6.440324e-49 | -8.615850e-47 |
| Msa1294070 | Msa1379760 | 0.809143 | 2.188695e-50 | -8.615850e-47 |
| Msa1294070 | Msa1392780 | 0.815649 | 8.297497e-52 | -8.615850e-47 |
| Msa1294070 | Msa1394290 | 0.815200 | 1.044440e-51 | -8.615850e-47 |
| Msa1294070 | Msa1400220 | 0.809269 | 2.056653e-50 | -8.615850e-47 |
| Msa1294070 | Msa1400580 | 0.840781 | 7.068846e-58 | -8.615850e-47 |
| Msa1294070 | Msa1419870 | 0.850519 | 1.611763e-60 | -8.615850e-47 |
| Msa1294070 | Msa1436520 | 0.848471 | 6.001736e-60 | -8.615850e-47 |
| Msa1294070 | Msa1436600 | 0.804162 | 2.465567e-49 | -8.615850e-47 |
| Msa1294070 | Msa1444310 | 0.817403 | 3.357356e-52 | -8.615850e-47 |
| Msa1294070 | Msa1457920 | 0.856834 | 2.461101e-62 | -8.615850e-47 |
| Msa1294070 | Msa1458810 | 0.812836 | 3.469591e-51 | -8.615850e-47 |
| Msa0385490 | Msa1294070 | 0.803074 | 4.146830e-49 | -8.615850e-47 |
| Msa0385580 | Msa1294070 | 0.838655 | 2.527891e-57 | -8.615850e-47 |
| Msa0388700 | Msa1294070 | 0.846703 | 1.839144e-59 | -8.615850e-47 |
| Msa0397540 | Msa1294070 | 0.812573 | 3.961634e-51 | -8.615850e-47 |
| Msa0402650 | Msa1294070 | 0.808016 | 3.809701e-50 | -8.615850e-47 |
| Msa0402790 | Msa1294070 | 0.802017 | 6.848306e-49 | -8.615850e-47 |
| Msa0419520 | Msa1294070 | 0.809972 | 1.452764e-50 | -8.615850e-47 |
| Msa0422400 | Msa1294070 | 0.800579 | 1.349033e-48 | -8.615850e-47 |
| Msa0431340 | Msa1294070 | 0.806154 | 9.440019e-50 | -8.615850e-47 |
| Msa0447220 | Msa1294070 | 0.802760 | 4.814655e-49 | -8.615850e-47 |
| Msa0455540 | Msa1294070 | 0.814769 | 1.301345e-51 | -8.615850e-47 |
| Msa0465550 | Msa1294070 | 0.834385 | 3.090129e-56 | -8.615850e-47 |
| Msa0467220 | Msa1294070 | 0.815796 | 7.695520e-52 | -8.615850e-47 |
| Msa0467780 | Msa1294070 | 0.800080 | 1.704356e-48 | -8.615850e-47 |
| Msa0476460 | Msa1294070 | 0.801779 | 7.664409e-49 | -8.615850e-47 |
| Msa0481280 | Msa1294070 | 0.816034 | 6.809652e-52 | -8.615850e-47 |
| Msa0481530 | Msa1294070 | 0.827157 | 1.826626e-54 | -8.615850e-47 |
| Msa0482130 | Msa1294070 | 0.836347 | 9.872639e-57 | -8.615850e-47 |
| Msa0980020 | Msa1294070 | 0.830368 | 3.055573e-55 | -8.615850e-47 |
| Msa0982270 | Msa1294070 | 0.801484 | 8.810216e-49 | -8.615850e-47 |
| Msa0987370 | Msa1294070 | 0.808399 | 3.157263e-50 | -8.615850e-47 |
| Msa0989540 | Msa1294070 | 0.835309 | 1.809202e-56 | -8.615850e-47 |
| Msa1009820 | Msa1294070 | 0.802075 | 6.662997e-49 | -8.615850e-47 |
| Msa1013400 | Msa1294070 | 0.815335 | 9.743672e-52 | -8.615850e-47 |
| Msa1014420 | Msa1294070 | 0.800143 | 1.654712e-48 | -8.615850e-47 |
| Msa1024750 | Msa1294070 | 0.811647 | 6.304701e-51 | -8.615850e-47 |
| Msa1050200 | Msa1294070 | 0.824440 | 8.063090e-54 | -8.615850e-47 |
| Msa1051200 | Msa1294070 | 0.816351 | 5.784796e-52 | -8.615850e-47 |
| Msa1077030 | Msa1294070 | 0.842859 | 1.998830e-58 | -8.615850e-47 |
| Msa1084470 | Msa1294070 | 0.819445 | 1.157434e-52 | -8.615850e-47 |
| Msa1088290 | Msa1294070 | 0.813940 | 1.984097e-51 | -8.615850e-47 |
| Msa1091100 | Msa1294070 | 0.814456 | 1.526918e-51 | -8.615850e-47 |
| Msa1091940 | Msa1294070 | 0.811083 | 8.358209e-51 | -8.615850e-47 |
| Msa1093530 | Msa1294070 | 0.820130 | 8.069351e-53 | -8.615850e-47 |
| Msa1100720 | Msa1294070 | 0.848379 | 6.365667e-60 | -8.615850e-47 |
| Msa1104140 | Msa1294070 | 0.813588 | 2.372631e-51 | -8.615850e-47 |
| Msa0239800 | Msa1294070 | 0.805214 | 1.487216e-49 | -8.615850e-47 |
| Msa0241470 | Msa1294070 | 0.827755 | 1.313062e-54 | -8.615850e-47 |
| Msa0260680 | Msa1294070 | 0.808525 | 2.967724e-50 | -8.615850e-47 |
| Msa0262310 | Msa1294070 | 0.813005 | 3.186403e-51 | -8.615850e-47 |
| Msa0271360 | Msa1294070 | 0.852611 | 4.119391e-61 | -8.615850e-47 |
| Msa0271530 | Msa1294070 | 0.833398 | 5.457865e-56 | -8.615850e-47 |
| Msa0279220 | Msa1294070 | 0.822364 | 2.464672e-53 | -8.615850e-47 |
| Msa0279240 | Msa1294070 | 0.808157 | 3.554694e-50 | -8.615850e-47 |
| Msa0299870 | Msa1294070 | 0.810821 | 9.524377e-51 | -8.615850e-47 |
| Msa0305890 | Msa1294070 | 0.801159 | 1.026726e-48 | -8.615850e-47 |
| Msa0309750 | Msa1294070 | 0.845058 | 5.147008e-59 | -8.615850e-47 |
| Msa0309770 | Msa1294070 | 0.812408 | 4.304701e-51 | -8.615850e-47 |
| Msa0309880 | Msa1294070 | 0.818428 | 1.970219e-52 | -8.615850e-47 |
| Msa0317510 | Msa1294070 | 0.804189 | 2.434484e-49 | -8.615850e-47 |
| Msa0318980 | Msa1294070 | 0.806737 | 7.112585e-50 | -8.615850e-47 |
| Msa0337650 | Msa1294070 | 0.808233 | 3.424793e-50 | -8.615850e-47 |
| Msa0340810 | Msa1294070 | 0.800147 | 1.651914e-48 | -8.615850e-47 |
| Msa0344540 | Msa1294070 | 0.802725 | 4.895446e-49 | -8.615850e-47 |
| Msa0351990 | Msa1294070 | 0.834154 | 3.530542e-56 | -8.615850e-47 |
| Msa1128570 | Msa1294070 | 0.804477 | 2.120208e-49 | -8.615850e-47 |
| Msa1131220 | Msa1294070 | 0.811173 | 7.993931e-51 | -8.615850e-47 |
| Msa1133400 | Msa1294070 | 0.800590 | 1.341874e-48 | -8.615850e-47 |
| Msa1134090 | Msa1294070 | 0.807170 | 5.762042e-50 | -8.615850e-47 |
| Msa1137700 | Msa1294070 | 0.815475 | 9.072745e-52 | -8.615850e-47 |
| Msa1138870 | Msa1294070 | 0.801535 | 8.599303e-49 | -8.615850e-47 |
| Msa1144040 | Msa1294070 | 0.814653 | 1.380569e-51 | -8.615850e-47 |
| Msa1160590 | Msa1294070 | 0.859932 | 2.937370e-63 | -8.615850e-47 |
| Msa1171360 | Msa1294070 | 0.828313 | 9.634229e-55 | -8.615850e-47 |
| Msa1181250 | Msa1294070 | 0.813354 | 2.671222e-51 | -8.615850e-47 |
| Msa1181330 | Msa1294070 | 0.805622 | 1.221328e-49 | -8.615850e-47 |
| Msa1200800 | Msa1294070 | 0.835379 | 1.736707e-56 | -8.615850e-47 |
| Msa1201560 | Msa1294070 | 0.810600 | 1.063673e-50 | -8.615850e-47 |
| Msa1204530 | Msa1294070 | 0.800357 | 1.496877e-48 | -8.615850e-47 |
| Msa1207270 | Msa1294070 | 0.802259 | 6.107179e-49 | -8.615850e-47 |
| Msa1208880 | Msa1294070 | 0.836108 | 1.135403e-56 | -8.615850e-47 |
| Msa1209200 | Msa1294070 | 0.816506 | 5.338595e-52 | -8.615850e-47 |
| Msa1209260 | Msa1294070 | 0.831598 | 1.524642e-55 | -8.615850e-47 |
| Msa1209760 | Msa1294070 | 0.872424 | 3.213770e-67 | -8.615850e-47 |
| Msa1217470 | Msa1294070 | 0.844837 | 5.901417e-59 | -8.615850e-47 |
| Msa1218500 | Msa1294070 | 0.809152 | 2.179196e-50 | -8.615850e-47 |
| Msa1218580 | Msa1294070 | 0.803912 | 2.778943e-49 | -8.615850e-47 |
| Msa1218600 | Msa1294070 | 0.816744 | 4.722475e-52 | -8.615850e-47 |
| Msa1219170 | Msa1294070 | 0.814228 | 1.714520e-51 | -8.615850e-47 |
| Msa0484780 | Msa1294070 | 0.801811 | 7.548191e-49 | -8.615850e-47 |
| Msa0486920 | Msa1294070 | 0.801207 | 1.003838e-48 | -8.615850e-47 |
| Msa0489410 | Msa1294070 | 0.809021 | 2.325071e-50 | -8.615850e-47 |
| Msa0493410 | Msa1294070 | 0.834476 | 2.932322e-56 | -8.615850e-47 |
| Msa0497490 | Msa1294070 | 0.822259 | 2.606811e-53 | -8.615850e-47 |
| Msa0502090 | Msa1294070 | 0.844739 | 6.272488e-59 | -8.615850e-47 |
| Msa0511490 | Msa1294070 | 0.823064 | 1.693536e-53 | -8.615850e-47 |
| Msa0514180 | Msa1294070 | 0.816923 | 4.305665e-52 | -8.615850e-47 |
| Msa0529890 | Msa1294070 | 0.820961 | 5.201864e-53 | -8.615850e-47 |
| Msa0542090 | Msa1294070 | 0.857634 | 1.428565e-62 | -8.615850e-47 |
| Msa0542130 | Msa1294070 | 0.858262 | 9.295280e-63 | -8.615850e-47 |
| Msa0554290 | Msa1294070 | 0.804438 | 2.160320e-49 | -8.615850e-47 |
| Msa0555450 | Msa1294070 | 0.826182 | 3.120918e-54 | -8.615850e-47 |
| Msa0561230 | Msa1294070 | 0.801112 | 1.050128e-48 | -8.615850e-47 |
| Msa0571920 | Msa1294070 | 0.807269 | 5.489072e-50 | -8.615850e-47 |
| Msa0581280 | Msa1294070 | 0.814846 | 1.251185e-51 | -8.615850e-47 |
| Msa0585560 | Msa1294070 | 0.820414 | 6.946416e-53 | -8.615850e-47 |
| Msa0589190 | Msa1294070 | 0.832057 | 1.174301e-55 | -8.615850e-47 |
| Msa0590650 | Msa1294070 | 0.802214 | 6.239879e-49 | -8.615850e-47 |
| Msa0592440 | Msa1294070 | 0.800235 | 1.585430e-48 | -8.615850e-47 |
| Msa0842830 | Msa1294070 | 0.807264 | 5.501842e-50 | -8.615850e-47 |
| Msa0859180 | Msa1294070 | 0.812300 | 4.545071e-51 | -8.615850e-47 |
| Msa0869120 | Msa1294070 | 0.840243 | 9.776674e-58 | -8.615850e-47 |
| Msa0872440 | Msa1294070 | 0.803540 | 3.320519e-49 | -8.615850e-47 |
| Msa0880040 | Msa1294070 | 0.800978 | 1.118235e-48 | -8.615850e-47 |
| Msa0880810 | Msa1294070 | 0.801154 | 1.029287e-48 | -8.615850e-47 |
| Msa0902760 | Msa1294070 | 0.818587 | 1.813218e-52 | -8.615850e-47 |
| Msa0908920 | Msa1294070 | -0.808216 | 3.453387e-50 | -8.615850e-47 |
| Msa0925770 | Msa1294070 | 0.800854 | 1.185635e-48 | -8.615850e-47 |
| Msa0933290 | Msa1294070 | 0.834823 | 2.398975e-56 | -8.615850e-47 |
| Msa0945440 | Msa1294070 | 0.847437 | 1.157182e-59 | -8.615850e-47 |
| Msa0968590 | Msa1294070 | 0.801209 | 1.003243e-48 | -8.615850e-47 |
| Msa0970030 | Msa1294070 | 0.815652 | 8.283162e-52 | -8.615850e-47 |
| Msa0970530 | Msa1294070 | 0.828142 | 1.059563e-54 | -8.615850e-47 |
| Msa0970600 | Msa1294070 | 0.818201 | 2.217761e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294070 | MtrunA17_Chr8g0370431 | 75.887 | 141 | 0 | 1 | 1 | 107 | 1 | 141 | 4.69e-64 | 190 |
| Msa1294070 | MtrunA17_Chr5g0407011 | 44.882 | 127 | 35 | 2 | 1 | 92 | 1 | 127 | 1.78e-25 | 92.8 |
| Msa1294070 | MtrunA17_Chr3g0143991 | 66.102 | 59 | 20 | 0 | 16 | 74 | 58 | 116 | 7.70e-21 | 81.6 |
| Msa1294070 | MtrunA17_Chr7g0242251 | 54.878 | 82 | 36 | 1 | 16 | 96 | 64 | 145 | 1.76e-17 | 73.2 |
| Msa1294070 | MtrunA17_Chr4g0052011 | 47.541 | 61 | 32 | 0 | 16 | 76 | 77 | 137 | 6.17e-13 | 60.8 |
| Msa1294070 | MtrunA17_Chr1g0212341 | 37.079 | 89 | 47 | 1 | 16 | 104 | 115 | 194 | 3.09e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1294070 | AT1G20696.3 | 65.116 | 86 | 29 | 1 | 14 | 98 | 4 | 89 | 3.33e-28 | 99.0 |
| Msa1294070 | AT1G20693.2 | 63.043 | 92 | 31 | 2 | 16 | 104 | 51 | 142 | 3.59e-28 | 100 |
| Msa1294070 | AT1G20696.4 | 65.000 | 80 | 27 | 1 | 14 | 92 | 4 | 83 | 5.22e-26 | 93.2 |
| Msa1294070 | AT1G20696.1 | 65.385 | 78 | 26 | 1 | 16 | 92 | 48 | 125 | 3.85e-25 | 92.4 |
| Msa1294070 | AT1G20693.3 | 62.821 | 78 | 28 | 1 | 16 | 92 | 51 | 128 | 2.21e-24 | 90.5 |
| Msa1294070 | AT1G20693.1 | 62.821 | 78 | 28 | 1 | 16 | 92 | 51 | 128 | 2.27e-24 | 90.5 |
| Msa1294070 | AT2G17560.2 | 56.044 | 91 | 38 | 1 | 16 | 104 | 48 | 138 | 2.96e-24 | 90.1 |
| Msa1294070 | AT2G17560.1 | 56.044 | 91 | 38 | 1 | 16 | 104 | 48 | 138 | 2.96e-24 | 90.1 |
| Msa1294070 | AT3G51880.2 | 59.756 | 82 | 29 | 2 | 16 | 96 | 66 | 144 | 2.82e-23 | 89.0 |
| Msa1294070 | AT3G51880.5 | 59.756 | 82 | 29 | 2 | 16 | 96 | 66 | 144 | 2.88e-23 | 88.6 |
| Msa1294070 | AT3G51880.1 | 59.756 | 82 | 29 | 2 | 16 | 96 | 66 | 144 | 2.88e-23 | 88.6 |
| Msa1294070 | AT3G51880.3 | 59.756 | 82 | 29 | 2 | 16 | 96 | 66 | 144 | 2.88e-23 | 88.6 |
| Msa1294070 | AT2G17560.3 | 57.471 | 87 | 34 | 2 | 16 | 100 | 48 | 133 | 4.75e-22 | 84.3 |
| Msa1294070 | AT3G51880.4 | 57.692 | 78 | 29 | 2 | 16 | 92 | 66 | 140 | 9.87e-21 | 81.6 |
| Msa1294070 | AT1G20696.2 | 66.667 | 60 | 20 | 0 | 16 | 75 | 48 | 107 | 1.57e-20 | 80.9 |
| Msa1294070 | AT1G20696.5 | 66.667 | 60 | 20 | 0 | 16 | 75 | 48 | 107 | 1.91e-20 | 80.1 |
| Msa1294070 | AT4G35570.1 | 44.286 | 70 | 39 | 0 | 16 | 85 | 47 | 116 | 3.08e-17 | 71.6 |
| Msa1294070 | AT4G35570.2 | 44.286 | 70 | 39 | 0 | 16 | 85 | 47 | 116 | 3.08e-17 | 71.6 |
| Msa1294070 | AT2G34450.4 | 44.262 | 61 | 34 | 0 | 16 | 76 | 76 | 136 | 6.13e-13 | 61.2 |
| Msa1294070 | AT2G34450.3 | 44.262 | 61 | 34 | 0 | 16 | 76 | 76 | 136 | 6.13e-13 | 61.2 |
| Msa1294070 | AT2G34450.1 | 44.262 | 61 | 34 | 0 | 16 | 76 | 76 | 136 | 6.13e-13 | 61.2 |
| Msa1294070 | AT2G34450.2 | 43.548 | 62 | 34 | 1 | 16 | 76 | 76 | 137 | 1.14e-11 | 58.2 |
Find 48 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATACTGAACCGTACTTTAG+AGG | 0.264950 | 8_3:+51763165 | None:intergenic |
| GTTGCGTTGTTGTGAGATTT+TGG | 0.268294 | 8_3:+51764534 | None:intergenic |
| CTTATACTGTTCTCTAAAAT+CGG | 0.321982 | 8_3:+51764054 | None:intergenic |
| ATTCACCAGTTTCTTGTTGT+AGG | 0.325921 | 8_3:+51763640 | None:intergenic |
| GCGGCAACGGATTTGTTGTT+AGG | 0.341320 | 8_3:+51764022 | None:intergenic |
| ACCACCACATGATGAAGTTT+AGG | 0.344212 | 8_3:-51763295 | Msa1294070:three_prime_UTR |
| TTACCGGTTATCAGCGGGTT+TGG | 0.344714 | 8_3:+51764418 | None:intergenic |
| TTGGAATCAGCTTTAACTTT+CGG | 0.360829 | 8_3:+51764437 | None:intergenic |
| GGGTAGGGAGTGAAGGGTAT+AGG | 0.361659 | 8_3:+51764581 | None:intergenic |
| CCACCACATGATGAAGTTTA+GGG | 0.386914 | 8_3:-51763294 | Msa1294070:three_prime_UTR |
| AGTTATTTGATTGGTTGAAA+TGG | 0.397936 | 8_3:+51764701 | None:intergenic |
| GAACGAGAGAGGGGATAAGA+AGG | 0.424761 | 8_3:+51764560 | None:intergenic |
| CGTTTCAATTCTGTTCTGTT+CGG | 0.436324 | 8_3:-51763105 | Msa1294070:three_prime_UTR |
| ATTCCAAACCCGCTGATAAC+CGG | 0.438213 | 8_3:-51764421 | Msa1294070:intron |
| TCGTTTATTGTCTTTCATAA+CGG | 0.442522 | 8_3:-51763054 | None:intergenic |
| ACAAGCCTACAACAAGAAAC+TGG | 0.447828 | 8_3:-51763645 | Msa1294070:intron |
| TTTAACCTTGTAGGAGGATG+AGG | 0.448986 | 8_3:-51763364 | Msa1294070:intron |
| TTCAATGCCCTAGCAGCATA+AGG | 0.463633 | 8_3:+51763695 | None:intergenic |
| ATAAGAAGGGTAGGGAGTGA+AGG | 0.464153 | 8_3:+51764574 | None:intergenic |
| AGAGAGGGGATAAGAAGGGT+AGG | 0.478048 | 8_3:+51764565 | None:intergenic |
| TTCATCCTCATCATTGACTT+CGG | 0.480014 | 8_3:+51763481 | None:intergenic |
| TCCGTGTGAAGTTATTTGAT+TGG | 0.481394 | 8_3:+51764692 | None:intergenic |
| GCGATTTACCGGTTATCAGC+GGG | 0.487221 | 8_3:+51764413 | None:intergenic |
| AAAGGAGCGAGTTGCTGAAT+CGG | 0.487717 | 8_3:+51764474 | None:intergenic |
| CCCTAAACTTCATCATGTGG+TGG | 0.495261 | 8_3:+51763294 | None:intergenic |
| GAGATTTCTTACAGCGGCAA+CGG | 0.506191 | 8_3:+51764009 | None:intergenic |
| CAAGGCTCCTTATGCTGCTA+GGG | 0.507356 | 8_3:-51763702 | Msa1294070:CDS |
| ACAAGGCTCCTTATGCTGCT+AGG | 0.511412 | 8_3:-51763703 | Msa1294070:CDS |
| GAGAGGGGATAAGAAGGGTA+GGG | 0.528146 | 8_3:+51764566 | None:intergenic |
| TAAGAAGGGTAGGGAGTGAA+GGG | 0.533744 | 8_3:+51764575 | None:intergenic |
| GAAAAGCTTGCGGTGAAGCA+TGG | 0.538505 | 8_3:-51763865 | Msa1294070:CDS |
| AACATTGACTTTAAGTACAC+AGG | 0.550744 | 8_3:+51763134 | None:intergenic |
| GTGAAGAATCCTCTAAAGTA+CGG | 0.552251 | 8_3:-51763174 | Msa1294070:three_prime_UTR |
| TAAACTTCATCATGTGGTGG+TGG | 0.562416 | 8_3:+51763297 | None:intergenic |
| ATCAGCTTTAACTTTCGGCA+TGG | 0.563633 | 8_3:+51764442 | None:intergenic |
| GAGGGAAAAGACGAGGAAGA+TGG | 0.570227 | 8_3:-51763521 | Msa1294070:CDS |
| TTTCCCTAAACTTCATCATG+TGG | 0.574768 | 8_3:+51763291 | None:intergenic |
| CAATGATGAGGATGAAGATG+AGG | 0.593124 | 8_3:-51763474 | Msa1294070:intron |
| AACGAGAGAGGGGATAAGAA+GGG | 0.608282 | 8_3:+51764561 | None:intergenic |
| AATTAGGTCGGAAAAGCTTG+CGG | 0.611496 | 8_3:-51763875 | Msa1294070:intron |
| CTTCACACGGATCGATGACG+TGG | 0.612835 | 8_3:-51764680 | Msa1294070:five_prime_UTR |
| ACCAATCAAATAACTTCACA+CGG | 0.617661 | 8_3:-51764693 | Msa1294070:five_prime_UTR |
| ATTGAAGTTTAGGGTTTACG+CGG | 0.619581 | 8_3:+51764639 | None:intergenic |
| AGCGATTTACCGGTTATCAG+CGG | 0.628276 | 8_3:+51764412 | None:intergenic |
| TTGAAGTTTAGGGTTTACGC+GGG | 0.641750 | 8_3:+51764640 | None:intergenic |
| AAAATCCGAAGTCAATGATG+AGG | 0.642367 | 8_3:-51763486 | Msa1294070:CDS |
| TTATTAGGAGGGAAAAGACG+AGG | 0.645171 | 8_3:-51763528 | Msa1294070:intron |
| ATTGACTTTAAGTACACAGG+AGG | 0.654407 | 8_3:+51763137 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTATTTTATTTTT+TGG | - | chr8_3:51763811-51763830 | Msa1294070:intron | 0.0% |
| !!! | TTTTTATTTATTTTATTTTT+TGG | - | chr8_3:51763811-51763830 | Msa1294070:intron | 0.0% |
| !!! | TTAATTTTAATTGATGATTT+AGG | - | chr8_3:51763698-51763717 | Msa1294070:CDS | 10.0% |
| !!! | TAATTTTTCGAAAATTAATT+AGG | - | chr8_3:51763885-51763904 | Msa1294070:intron | 10.0% |
| !!! | TTAATTTTAATTGATGATTT+AGG | - | chr8_3:51763698-51763717 | Msa1294070:CDS | 10.0% |
| !!! | TAATTTTTCGAAAATTAATT+AGG | - | chr8_3:51763885-51763904 | Msa1294070:intron | 10.0% |
| !!! | ATTTTTTGGATTATAATTTG+TGG | - | chr8_3:51763825-51763844 | Msa1294070:intron | 15.0% |
| !!! | TTTTTTTTGTTAACTTTCAT+CGG | - | chr8_3:51763976-51763995 | Msa1294070:intron | 15.0% |
| !!! | TTCATTCATATTAGTAATTT+TGG | - | chr8_3:51764160-51764179 | Msa1294070:intron | 15.0% |
| !!! | TAACTTTTTGTTGATTTATT+AGG | - | chr8_3:51764233-51764252 | Msa1294070:intron | 15.0% |
| !! | ATGATAATTGAATAATTGAA+TGG | - | chr8_3:51764371-51764390 | Msa1294070:intron | 15.0% |
| !!! | GAAAAAAATATGTTTTGTTT+AGG | - | chr8_3:51764516-51764535 | Msa1294070:five_prime_UTR | 15.0% |
| !!! | ATTTTTTGGATTATAATTTG+TGG | - | chr8_3:51763825-51763844 | Msa1294070:intron | 15.0% |
| !!! | TTTTTTTTGTTAACTTTCAT+CGG | - | chr8_3:51763976-51763995 | Msa1294070:intron | 15.0% |
| !!! | TTCATTCATATTAGTAATTT+TGG | - | chr8_3:51764160-51764179 | Msa1294070:intron | 15.0% |
| !!! | TAACTTTTTGTTGATTTATT+AGG | - | chr8_3:51764233-51764252 | Msa1294070:intron | 15.0% |
| !! | ATGATAATTGAATAATTGAA+TGG | - | chr8_3:51764371-51764390 | Msa1294070:intron | 15.0% |
| !!! | GAAAAAAATATGTTTTGTTT+AGG | - | chr8_3:51764516-51764535 | Msa1294070:five_prime_UTR | 15.0% |
| !! | GAATGAAAAATTGAAGTTTA+GGG | + | chr8_3:51763149-51763168 | None:intergenic | 20.0% |
| !! | TGAATGAAAAATTGAAGTTT+AGG | + | chr8_3:51763150-51763169 | None:intergenic | 20.0% |
| !! | CTAATCAGATCTAAAAAAAT+TGG | + | chr8_3:51763414-51763433 | None:intergenic | 20.0% |
| !!! | TTTCAGATTTGAATCTTTTT+TGG | - | chr8_3:51763631-51763650 | Msa1294070:intron | 20.0% |
| !!! | TGATTTGTTCGTTTTTTTAA+CGG | - | chr8_3:51763671-51763690 | Msa1294070:CDS | 20.0% |
| !!! | TAATTTGTGGATTTTATTGT+CGG | - | chr8_3:51763838-51763857 | Msa1294070:intron | 20.0% |
| !!! | TTTTCGAAAATTAATTAGGT+CGG | - | chr8_3:51763889-51763908 | Msa1294070:intron | 20.0% |
| !!! | TTTTTGTTGATTTATTAGGA+GGG | - | chr8_3:51764237-51764256 | Msa1294070:intron | 20.0% |
| !!! | AGTTTATTTTTTAACCTTGT+AGG | - | chr8_3:51764403-51764422 | Msa1294070:intron | 20.0% |
| !!! | AATATGTTTTGTTTAGGTTA+TGG | - | chr8_3:51764522-51764541 | Msa1294070:five_prime_UTR | 20.0% |
| !! | ACAATAAACGAAACAAAAAT+TGG | + | chr8_3:51764713-51764732 | None:intergenic | 20.0% |
| !! | GAATGAAAAATTGAAGTTTA+GGG | + | chr8_3:51763149-51763168 | None:intergenic | 20.0% |
| !! | TGAATGAAAAATTGAAGTTT+AGG | + | chr8_3:51763150-51763169 | None:intergenic | 20.0% |
| !! | CTAATCAGATCTAAAAAAAT+TGG | + | chr8_3:51763414-51763433 | None:intergenic | 20.0% |
| !!! | TTTCAGATTTGAATCTTTTT+TGG | - | chr8_3:51763631-51763650 | Msa1294070:intron | 20.0% |
| !!! | TGATTTGTTCGTTTTTTTAA+CGG | - | chr8_3:51763671-51763690 | Msa1294070:CDS | 20.0% |
| !!! | TAATTTGTGGATTTTATTGT+CGG | - | chr8_3:51763838-51763857 | Msa1294070:intron | 20.0% |
| !!! | TTTTCGAAAATTAATTAGGT+CGG | - | chr8_3:51763889-51763908 | Msa1294070:intron | 20.0% |
| !!! | TTTTTGTTGATTTATTAGGA+GGG | - | chr8_3:51764237-51764256 | Msa1294070:intron | 20.0% |
| !!! | AGTTTATTTTTTAACCTTGT+AGG | - | chr8_3:51764403-51764422 | Msa1294070:intron | 20.0% |
| !!! | AATATGTTTTGTTTAGGTTA+TGG | - | chr8_3:51764522-51764541 | Msa1294070:five_prime_UTR | 20.0% |
| !! | ACAATAAACGAAACAAAAAT+TGG | + | chr8_3:51764713-51764732 | None:intergenic | 20.0% |
| !! | AGTTATTTGATTGGTTGAAA+TGG | + | chr8_3:51763078-51763097 | None:intergenic | 25.0% |
| !!! | CTTATACTGTTCTCTAAAAT+CGG | + | chr8_3:51763725-51763744 | None:intergenic | 25.0% |
| !!! | CTTTTTGTTGATTTATTAGG+AGG | - | chr8_3:51764236-51764255 | Msa1294070:intron | 25.0% |
| !!! | TTATTTTTTAACCTTGTAGG+AGG | - | chr8_3:51764406-51764425 | Msa1294070:intron | 25.0% |
| !! | AGTTATTTGATTGGTTGAAA+TGG | + | chr8_3:51763078-51763097 | None:intergenic | 25.0% |
| !!! | CTTATACTGTTCTCTAAAAT+CGG | + | chr8_3:51763725-51763744 | None:intergenic | 25.0% |
| !!! | CTTTTTGTTGATTTATTAGG+AGG | - | chr8_3:51764236-51764255 | Msa1294070:intron | 25.0% |
| !!! | TTATTTTTTAACCTTGTAGG+AGG | - | chr8_3:51764406-51764425 | Msa1294070:intron | 25.0% |
| ACCAATCAAATAACTTCACA+CGG | - | chr8_3:51763083-51763102 | Msa1294070:three_prime_UTR | 30.0% | |
| AGAGAAAACGCAAAGAAAAA+AGG | + | chr8_3:51763175-51763194 | None:intergenic | 30.0% | |
| ! | TTGGAATCAGCTTTAACTTT+CGG | + | chr8_3:51763342-51763361 | None:intergenic | 30.0% |
| TTGGAGAAGAAAAAATCGAA+CGG | + | chr8_3:51763395-51763414 | None:intergenic | 30.0% | |
| !!! | GTACTGTGATTTTGATTTTC+AGG | - | chr8_3:51764050-51764069 | Msa1294070:CDS | 30.0% |
| !!! | TGATTTTGATTTTCAGGACA+AGG | - | chr8_3:51764056-51764075 | Msa1294070:CDS | 30.0% |
| GAAGTTTAGGGAAAAATTGT+TGG | - | chr8_3:51764494-51764513 | Msa1294070:five_prime_UTR | 30.0% | |
| !! | AACATTGACTTTAAGTACAC+AGG | + | chr8_3:51764645-51764664 | None:intergenic | 30.0% |
| ACGAAACAAAAATTGGAAGT+TGG | + | chr8_3:51764706-51764725 | None:intergenic | 30.0% | |
| ACCAATCAAATAACTTCACA+CGG | - | chr8_3:51763083-51763102 | Msa1294070:three_prime_UTR | 30.0% | |
| AGAGAAAACGCAAAGAAAAA+AGG | + | chr8_3:51763175-51763194 | None:intergenic | 30.0% | |
| ! | TTGGAATCAGCTTTAACTTT+CGG | + | chr8_3:51763342-51763361 | None:intergenic | 30.0% |
| TTGGAGAAGAAAAAATCGAA+CGG | + | chr8_3:51763395-51763414 | None:intergenic | 30.0% | |
| !!! | GTACTGTGATTTTGATTTTC+AGG | - | chr8_3:51764050-51764069 | Msa1294070:CDS | 30.0% |
| !!! | TGATTTTGATTTTCAGGACA+AGG | - | chr8_3:51764056-51764075 | Msa1294070:CDS | 30.0% |
| GAAGTTTAGGGAAAAATTGT+TGG | - | chr8_3:51764494-51764513 | Msa1294070:five_prime_UTR | 30.0% | |
| !! | AACATTGACTTTAAGTACAC+AGG | + | chr8_3:51764645-51764664 | None:intergenic | 30.0% |
| ACGAAACAAAAATTGGAAGT+TGG | + | chr8_3:51764706-51764725 | None:intergenic | 30.0% | |
| TCCGTGTGAAGTTATTTGAT+TGG | + | chr8_3:51763087-51763106 | None:intergenic | 35.0% | |
| ! | ATTGAAGTTTAGGGTTTACG+CGG | + | chr8_3:51763140-51763159 | None:intergenic | 35.0% |
| !! | ATGAAAACGAAGAAAGCACT+TGG | + | chr8_3:51763584-51763603 | None:intergenic | 35.0% |
| GTAAACGAGATTTCTTACAG+CGG | + | chr8_3:51763776-51763795 | None:intergenic | 35.0% | |
| ! | ATTCACCAGTTTCTTGTTGT+AGG | + | chr8_3:51764139-51764158 | None:intergenic | 35.0% |
| AAAATCCGAAGTCAATGATG+AGG | - | chr8_3:51764290-51764309 | Msa1294070:intron | 35.0% | |
| !! | TTCATCCTCATCATTGACTT+CGG | + | chr8_3:51764298-51764317 | None:intergenic | 35.0% |
| TTTCCCTAAACTTCATCATG+TGG | + | chr8_3:51764488-51764507 | None:intergenic | 35.0% | |
| !! | GTGAAGAATCCTCTAAAGTA+CGG | - | chr8_3:51764602-51764621 | Msa1294070:five_prime_UTR | 35.0% |
| ! | ATTGACTTTAAGTACACAGG+AGG | + | chr8_3:51764642-51764661 | None:intergenic | 35.0% |
| CGTTTCAATTCTGTTCTGTT+CGG | - | chr8_3:51764671-51764690 | Msa1294070:five_prime_UTR | 35.0% | |
| TCCGTGTGAAGTTATTTGAT+TGG | + | chr8_3:51763087-51763106 | None:intergenic | 35.0% | |
| ! | ATTGAAGTTTAGGGTTTACG+CGG | + | chr8_3:51763140-51763159 | None:intergenic | 35.0% |
| !! | ATGAAAACGAAGAAAGCACT+TGG | + | chr8_3:51763584-51763603 | None:intergenic | 35.0% |
| GTAAACGAGATTTCTTACAG+CGG | + | chr8_3:51763776-51763795 | None:intergenic | 35.0% | |
| ! | ATTCACCAGTTTCTTGTTGT+AGG | + | chr8_3:51764139-51764158 | None:intergenic | 35.0% |
| AAAATCCGAAGTCAATGATG+AGG | - | chr8_3:51764290-51764309 | Msa1294070:intron | 35.0% | |
| !! | TTCATCCTCATCATTGACTT+CGG | + | chr8_3:51764298-51764317 | None:intergenic | 35.0% |
| TTTCCCTAAACTTCATCATG+TGG | + | chr8_3:51764488-51764507 | None:intergenic | 35.0% | |
| !! | GTGAAGAATCCTCTAAAGTA+CGG | - | chr8_3:51764602-51764621 | Msa1294070:five_prime_UTR | 35.0% |
| ! | ATTGACTTTAAGTACACAGG+AGG | + | chr8_3:51764642-51764661 | None:intergenic | 35.0% |
| CGTTTCAATTCTGTTCTGTT+CGG | - | chr8_3:51764671-51764690 | Msa1294070:five_prime_UTR | 35.0% | |
| ! | TTGAAGTTTAGGGTTTACGC+GGG | + | chr8_3:51763139-51763158 | None:intergenic | 40.0% |
| ! | GTTGCGTTGTTGTGAGATTT+TGG | + | chr8_3:51763245-51763264 | None:intergenic | 40.0% |
| ! | ATCAGCTTTAACTTTCGGCA+TGG | + | chr8_3:51763337-51763356 | None:intergenic | 40.0% |
| !!! | GATTTTAGCTTGAAGCGCAA+AGG | - | chr8_3:51763494-51763513 | Msa1294070:CDS | 40.0% |
| !! | AAAACGAAGAAAGCACTTGG+AGG | + | chr8_3:51763581-51763600 | None:intergenic | 40.0% |
| AATTAGGTCGGAAAAGCTTG+CGG | - | chr8_3:51763901-51763920 | Msa1294070:intron | 40.0% | |
| ACAAGCCTACAACAAGAAAC+TGG | - | chr8_3:51764131-51764150 | Msa1294070:intron | 40.0% | |
| TTATTAGGAGGGAAAAGACG+AGG | - | chr8_3:51764248-51764267 | Msa1294070:intron | 40.0% | |
| CAATGATGAGGATGAAGATG+AGG | - | chr8_3:51764302-51764321 | Msa1294070:intron | 40.0% | |
| TTTAACCTTGTAGGAGGATG+AGG | - | chr8_3:51764412-51764431 | Msa1294070:intron | 40.0% | |
| TAAACTTCATCATGTGGTGG+TGG | + | chr8_3:51764482-51764501 | None:intergenic | 40.0% | |
| ACCACCACATGATGAAGTTT+AGG | - | chr8_3:51764481-51764500 | Msa1294070:five_prime_UTR | 40.0% | |
| CCACCACATGATGAAGTTTA+GGG | - | chr8_3:51764482-51764501 | Msa1294070:five_prime_UTR | 40.0% | |
| GATACTGAACCGTACTTTAG+AGG | + | chr8_3:51764614-51764633 | None:intergenic | 40.0% | |
| ! | TTGAAGTTTAGGGTTTACGC+GGG | + | chr8_3:51763139-51763158 | None:intergenic | 40.0% |
| ! | GTTGCGTTGTTGTGAGATTT+TGG | + | chr8_3:51763245-51763264 | None:intergenic | 40.0% |
| ! | ATCAGCTTTAACTTTCGGCA+TGG | + | chr8_3:51763337-51763356 | None:intergenic | 40.0% |
| !!! | GATTTTAGCTTGAAGCGCAA+AGG | - | chr8_3:51763494-51763513 | Msa1294070:CDS | 40.0% |
| !! | AAAACGAAGAAAGCACTTGG+AGG | + | chr8_3:51763581-51763600 | None:intergenic | 40.0% |
| AATTAGGTCGGAAAAGCTTG+CGG | - | chr8_3:51763901-51763920 | Msa1294070:intron | 40.0% | |
| ACAAGCCTACAACAAGAAAC+TGG | - | chr8_3:51764131-51764150 | Msa1294070:intron | 40.0% | |
| TTATTAGGAGGGAAAAGACG+AGG | - | chr8_3:51764248-51764267 | Msa1294070:intron | 40.0% | |
| CAATGATGAGGATGAAGATG+AGG | - | chr8_3:51764302-51764321 | Msa1294070:intron | 40.0% | |
| TTTAACCTTGTAGGAGGATG+AGG | - | chr8_3:51764412-51764431 | Msa1294070:intron | 40.0% | |
| TAAACTTCATCATGTGGTGG+TGG | + | chr8_3:51764482-51764501 | None:intergenic | 40.0% | |
| ACCACCACATGATGAAGTTT+AGG | - | chr8_3:51764481-51764500 | Msa1294070:five_prime_UTR | 40.0% | |
| CCACCACATGATGAAGTTTA+GGG | - | chr8_3:51764482-51764501 | Msa1294070:five_prime_UTR | 40.0% | |
| GATACTGAACCGTACTTTAG+AGG | + | chr8_3:51764614-51764633 | None:intergenic | 40.0% | |
| TAAGAAGGGTAGGGAGTGAA+GGG | + | chr8_3:51763204-51763223 | None:intergenic | 45.0% | |
| ATAAGAAGGGTAGGGAGTGA+AGG | + | chr8_3:51763205-51763224 | None:intergenic | 45.0% | |
| AACGAGAGAGGGGATAAGAA+GGG | + | chr8_3:51763218-51763237 | None:intergenic | 45.0% | |
| !!! | ATTTTGGAGCGAACGAGAGA+GGG | + | chr8_3:51763229-51763248 | None:intergenic | 45.0% |
| AAAGGAGCGAGTTGCTGAAT+CGG | + | chr8_3:51763305-51763324 | None:intergenic | 45.0% | |
| ATTCCAAACCCGCTGATAAC+CGG | - | chr8_3:51763355-51763374 | Msa1294070:intron | 45.0% | |
| ! | AGCGATTTACCGGTTATCAG+CGG | + | chr8_3:51763367-51763386 | None:intergenic | 45.0% |
| AACGGTGAGAAGCGATTTAC+CGG | + | chr8_3:51763377-51763396 | None:intergenic | 45.0% | |
| ! | AAAGCACTTGGAGGTCTCTT+TGG | + | chr8_3:51763572-51763591 | None:intergenic | 45.0% |
| GAGATTTCTTACAGCGGCAA+CGG | + | chr8_3:51763770-51763789 | None:intergenic | 45.0% | |
| TTCAATGCCCTAGCAGCATA+AGG | + | chr8_3:51764084-51764103 | None:intergenic | 45.0% | |
| ATCATCCTCATCCTCCTACA+AGG | + | chr8_3:51764420-51764439 | None:intergenic | 45.0% | |
| CCCTAAACTTCATCATGTGG+TGG | + | chr8_3:51764485-51764504 | None:intergenic | 45.0% | |
| TAAGAAGGGTAGGGAGTGAA+GGG | + | chr8_3:51763204-51763223 | None:intergenic | 45.0% | |
| ATAAGAAGGGTAGGGAGTGA+AGG | + | chr8_3:51763205-51763224 | None:intergenic | 45.0% | |
| AACGAGAGAGGGGATAAGAA+GGG | + | chr8_3:51763218-51763237 | None:intergenic | 45.0% | |
| !!! | ATTTTGGAGCGAACGAGAGA+GGG | + | chr8_3:51763229-51763248 | None:intergenic | 45.0% |
| AAAGGAGCGAGTTGCTGAAT+CGG | + | chr8_3:51763305-51763324 | None:intergenic | 45.0% | |
| ATTCCAAACCCGCTGATAAC+CGG | - | chr8_3:51763355-51763374 | Msa1294070:intron | 45.0% | |
| ! | AGCGATTTACCGGTTATCAG+CGG | + | chr8_3:51763367-51763386 | None:intergenic | 45.0% |
| AACGGTGAGAAGCGATTTAC+CGG | + | chr8_3:51763377-51763396 | None:intergenic | 45.0% | |
| ! | AAAGCACTTGGAGGTCTCTT+TGG | + | chr8_3:51763572-51763591 | None:intergenic | 45.0% |
| GAGATTTCTTACAGCGGCAA+CGG | + | chr8_3:51763770-51763789 | None:intergenic | 45.0% | |
| TTCAATGCCCTAGCAGCATA+AGG | + | chr8_3:51764084-51764103 | None:intergenic | 45.0% | |
| ATCATCCTCATCCTCCTACA+AGG | + | chr8_3:51764420-51764439 | None:intergenic | 45.0% | |
| CCCTAAACTTCATCATGTGG+TGG | + | chr8_3:51764485-51764504 | None:intergenic | 45.0% | |
| GAGAGGGGATAAGAAGGGTA+GGG | + | chr8_3:51763213-51763232 | None:intergenic | 50.0% | |
| AGAGAGGGGATAAGAAGGGT+AGG | + | chr8_3:51763214-51763233 | None:intergenic | 50.0% | |
| GAACGAGAGAGGGGATAAGA+AGG | + | chr8_3:51763219-51763238 | None:intergenic | 50.0% | |
| !!! | TTTTGGAGCGAACGAGAGAG+GGG | + | chr8_3:51763228-51763247 | None:intergenic | 50.0% |
| !!! | GATTTTGGAGCGAACGAGAG+AGG | + | chr8_3:51763230-51763249 | None:intergenic | 50.0% |
| TCGGCATGGCGAAAAACGAA+AGG | + | chr8_3:51763323-51763342 | None:intergenic | 50.0% | |
| ! | TTACCGGTTATCAGCGGGTT+TGG | + | chr8_3:51763361-51763380 | None:intergenic | 50.0% |
| ! | GCGATTTACCGGTTATCAGC+GGG | + | chr8_3:51763366-51763385 | None:intergenic | 50.0% |
| ACAGACGAAGAAAGCAGCGA+AGG | - | chr8_3:51763535-51763554 | Msa1294070:intron | 50.0% | |
| !! | GGAGGTCTCTTTGGCTTGTT+AGG | + | chr8_3:51763563-51763582 | None:intergenic | 50.0% |
| !! | GCGGCAACGGATTTGTTGTT+AGG | + | chr8_3:51763757-51763776 | None:intergenic | 50.0% |
| GAAAAGCTTGCGGTGAAGCA+TGG | - | chr8_3:51763911-51763930 | Msa1294070:intron | 50.0% | |
| ACAAGGCTCCTTATGCTGCT+AGG | - | chr8_3:51764073-51764092 | Msa1294070:intron | 50.0% | |
| CAAGGCTCCTTATGCTGCTA+GGG | - | chr8_3:51764074-51764093 | Msa1294070:intron | 50.0% | |
| GAGGGAAAAGACGAGGAAGA+TGG | - | chr8_3:51764255-51764274 | Msa1294070:intron | 50.0% | |
| GAGAGGGGATAAGAAGGGTA+GGG | + | chr8_3:51763213-51763232 | None:intergenic | 50.0% | |
| AGAGAGGGGATAAGAAGGGT+AGG | + | chr8_3:51763214-51763233 | None:intergenic | 50.0% | |
| GAACGAGAGAGGGGATAAGA+AGG | + | chr8_3:51763219-51763238 | None:intergenic | 50.0% | |
| !!! | TTTTGGAGCGAACGAGAGAG+GGG | + | chr8_3:51763228-51763247 | None:intergenic | 50.0% |
| !!! | GATTTTGGAGCGAACGAGAG+AGG | + | chr8_3:51763230-51763249 | None:intergenic | 50.0% |
| TCGGCATGGCGAAAAACGAA+AGG | + | chr8_3:51763323-51763342 | None:intergenic | 50.0% | |
| ! | TTACCGGTTATCAGCGGGTT+TGG | + | chr8_3:51763361-51763380 | None:intergenic | 50.0% |
| ! | GCGATTTACCGGTTATCAGC+GGG | + | chr8_3:51763366-51763385 | None:intergenic | 50.0% |
| ACAGACGAAGAAAGCAGCGA+AGG | - | chr8_3:51763535-51763554 | Msa1294070:intron | 50.0% | |
| !! | GGAGGTCTCTTTGGCTTGTT+AGG | + | chr8_3:51763563-51763582 | None:intergenic | 50.0% |
| !! | GCGGCAACGGATTTGTTGTT+AGG | + | chr8_3:51763757-51763776 | None:intergenic | 50.0% |
| GAAAAGCTTGCGGTGAAGCA+TGG | - | chr8_3:51763911-51763930 | Msa1294070:intron | 50.0% | |
| ACAAGGCTCCTTATGCTGCT+AGG | - | chr8_3:51764073-51764092 | Msa1294070:intron | 50.0% | |
| CAAGGCTCCTTATGCTGCTA+GGG | - | chr8_3:51764074-51764093 | Msa1294070:intron | 50.0% | |
| GAGGGAAAAGACGAGGAAGA+TGG | - | chr8_3:51764255-51764274 | Msa1294070:intron | 50.0% | |
| CTTCACACGGATCGATGACG+TGG | - | chr8_3:51763096-51763115 | Msa1294070:three_prime_UTR | 55.0% | |
| ! | GGGTAGGGAGTGAAGGGTAT+AGG | + | chr8_3:51763198-51763217 | None:intergenic | 55.0% |
| ! | AGCTTGAAGCGCAAAGGTGC+TGG | - | chr8_3:51763500-51763519 | Msa1294070:CDS | 55.0% |
| CTTCACACGGATCGATGACG+TGG | - | chr8_3:51763096-51763115 | Msa1294070:three_prime_UTR | 55.0% | |
| ! | GGGTAGGGAGTGAAGGGTAT+AGG | + | chr8_3:51763198-51763217 | None:intergenic | 55.0% |
| ! | AGCTTGAAGCGCAAAGGTGC+TGG | - | chr8_3:51763500-51763519 | Msa1294070:CDS | 55.0% |
| !! | AAGCGCAAAGGTGCTGGAGC+TGG | - | chr8_3:51763506-51763525 | Msa1294070:CDS | 60.0% |
| !! | GCAAAGGTGCTGGAGCTGGA+AGG | - | chr8_3:51763510-51763529 | Msa1294070:CDS | 60.0% |
| !! | AAGCGCAAAGGTGCTGGAGC+TGG | - | chr8_3:51763506-51763525 | Msa1294070:CDS | 60.0% |
| !! | GCAAAGGTGCTGGAGCTGGA+AGG | - | chr8_3:51763510-51763529 | Msa1294070:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 51763057 | 51764741 | 51763057 | ID=Msa1294070;Name=Msa1294070 |
| chr8_3 | mRNA | 51763057 | 51764741 | 51763057 | ID=Msa1294070-mRNA-1;Parent=Msa1294070;Name=Msa1294070-mRNA-1;_AED=0.17;_eAED=0.17;_QI=279|0.8|1|1|1|1|6|284|108 |
| chr8_3 | exon | 51763057 | 51763373 | 51763057 | ID=Msa1294070-mRNA-1:exon:14554;Parent=Msa1294070-mRNA-1 |
| chr8_3 | exon | 51763475 | 51763543 | 51763475 | ID=Msa1294070-mRNA-1:exon:14553;Parent=Msa1294070-mRNA-1 |
| chr8_3 | exon | 51763646 | 51763726 | 51763646 | ID=Msa1294070-mRNA-1:exon:14552;Parent=Msa1294070-mRNA-1 |
| chr8_3 | exon | 51763847 | 51763891 | 51763847 | ID=Msa1294070-mRNA-1:exon:14551;Parent=Msa1294070-mRNA-1 |
| chr8_3 | exon | 51764021 | 51764078 | 51764021 | ID=Msa1294070-mRNA-1:exon:14550;Parent=Msa1294070-mRNA-1 |
| chr8_3 | exon | 51764422 | 51764741 | 51764422 | ID=Msa1294070-mRNA-1:exon:14549;Parent=Msa1294070-mRNA-1 |
| chr8_3 | five_prime_UTR | 51764463 | 51764741 | 51764463 | ID=Msa1294070-mRNA-1:five_prime_utr;Parent=Msa1294070-mRNA-1 |
| chr8_3 | CDS | 51764422 | 51764462 | 51764422 | ID=Msa1294070-mRNA-1:cds;Parent=Msa1294070-mRNA-1 |
| chr8_3 | CDS | 51764021 | 51764078 | 51764021 | ID=Msa1294070-mRNA-1:cds;Parent=Msa1294070-mRNA-1 |
| chr8_3 | CDS | 51763847 | 51763891 | 51763847 | ID=Msa1294070-mRNA-1:cds;Parent=Msa1294070-mRNA-1 |
| chr8_3 | CDS | 51763646 | 51763726 | 51763646 | ID=Msa1294070-mRNA-1:cds;Parent=Msa1294070-mRNA-1 |
| chr8_3 | CDS | 51763475 | 51763543 | 51763475 | ID=Msa1294070-mRNA-1:cds;Parent=Msa1294070-mRNA-1 |
| chr8_3 | CDS | 51763341 | 51763373 | 51763341 | ID=Msa1294070-mRNA-1:cds;Parent=Msa1294070-mRNA-1 |
| chr8_3 | three_prime_UTR | 51763057 | 51763340 | 51763057 | ID=Msa1294070-mRNA-1:three_prime_utr;Parent=Msa1294070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
