AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0169280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0169280 MtrunA17_Chr1g0185981 97.360 1288 34 0 1 1288 1 1288 0.0 2583
Msa0169280 MtrunA17_Chr1g0185991 86.022 1302 157 6 1 1288 1 1291 0.0 2249
Msa0169280 MtrunA17_Chr1g0173231 28.787 1129 737 23 10 1103 8 1104 4.08e-107 365
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0169280 AT2G34357.1 52.232 1277 572 16 16 1285 24 1269 0.0 1211
Msa0169280 AT4G23540.1 28.571 1078 690 25 14 1051 18 1055 2.32e-108 369

Find 270 sgRNAs with CRISPR-Local

Find 705 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTGTTCTTCTCCGCTTT+TGG 0.114005 1_4:-52494858 None:intergenic
TTTACTTTGTGCAGATATTT+TGG 0.170487 1_4:+52485819 Msa0169280:intron
ATCCTTTATACCATTGAATT+TGG 0.176595 1_4:+52487161 Msa0169280:CDS
ACCTCATCAAATGAGATTTC+TGG 0.183929 1_4:+52485608 Msa0169280:CDS
TGAGGTTCTGCTTGGGCTTA+TGG 0.208576 1_4:+52489404 Msa0169280:CDS
CAGATCTTTCAACAAGTTCT+TGG 0.242536 1_4:-52487727 None:intergenic
GGCCAATCTTGGTTTATTAA+AGG 0.244569 1_4:+52493186 Msa0169280:intron
TAGAAATTGCCTTGCCGTTC+AGG 0.255024 1_4:-52494249 None:intergenic
TGCCTATGATTGGACGTATT+AGG 0.272542 1_4:+52487280 Msa0169280:CDS
TCAAATGATAAAGATGATAT+TGG 0.273601 1_4:+52487621 Msa0169280:CDS
TCCGCAATGTTTCACAAATT+AGG 0.275204 1_4:+52486063 Msa0169280:CDS
ATTTATCTGTGTCAAATATA+TGG 0.275809 1_4:+52487193 Msa0169280:CDS
ATAAAGGATAAGAAAGTTTC+AGG 0.277939 1_4:-52487147 None:intergenic
ATTAACCAAGACTTGTTCTT+TGG 0.291284 1_4:-52487655 None:intergenic
GCCTATGATTGGACGTATTA+GGG 0.297196 1_4:+52487281 Msa0169280:CDS
CAATCCTTCTGCTTGTGATT+TGG 0.298079 1_4:-52493218 None:intergenic
CATATTATTCCACGAATATC+AGG 0.314917 1_4:-52487552 None:intergenic
CTGAAGGACGTTTGATTATC+CGG 0.320522 1_4:+52494737 Msa0169280:CDS
TGATGAGAGTTTGATTAAAC+AGG 0.320857 1_4:+52485909 Msa0169280:CDS
GTGTATTTATTTGATGATAA+AGG 0.321403 1_4:+52495197 Msa0169280:three_prime_UTR
TGCATCTGTGACTGCGAATA+TGG 0.321404 1_4:-52485860 None:intergenic
AATCAGCAGCATCGTCATTC+AGG 0.322268 1_4:+52494299 Msa0169280:CDS
TTTCGCATTTGTTGATTCAT+AGG 0.325836 1_4:+52484477 Msa0169280:CDS
AGCTTGAACCTTATGCATAT+TGG 0.332365 1_4:+52494962 Msa0169280:CDS
AGTATTAAAGCCAGCATTGC+AGG 0.334576 1_4:+52488994 Msa0169280:CDS
CTGTGGTAAATATGACAAAA+AGG 0.345210 1_4:+52495052 Msa0169280:CDS
AACCTTTAATAAACCAAGAT+TGG 0.349531 1_4:-52493188 None:intergenic
TCGGAGAGTATCGTTGTTGA+TGG 0.352716 1_4:+52484443 Msa0169280:CDS
TTCCAAATTCAATGGTATAA+AGG 0.353034 1_4:-52487163 None:intergenic
TCTTCCCCAGTCGCATATTT+CGG 0.358176 1_4:+52484236 Msa0169280:CDS
TGAGGTGTTGTGCACATTAT+CGG 0.358806 1_4:+52485577 Msa0169280:CDS
GTCGAAGTCGCCCATGCATT+TGG 0.359151 1_4:+52492746 Msa0169280:CDS
TTCAATTCCATTTCCGATCA+TGG 0.359263 1_4:+52484052 Msa0169280:exon
TTCTCCGTCGTCGAAGAATT+CGG 0.360523 1_4:+52484424 Msa0169280:CDS
ATGACGTGGTCAGGTGGATT+AGG 0.364631 1_4:-52484296 None:intergenic
TTCTCCGTGTAGGCCAATCT+TGG 0.365341 1_4:+52493175 Msa0169280:intron
AGTTAGACCTGTTTCCTAAA+GGG 0.366515 1_4:-52486471 None:intergenic
ATTCCTTCCATGATCGGAAA+TGG 0.367716 1_4:-52484059 None:intergenic
ACGCACTTGCTTACTCTTTG+TGG 0.368574 1_4:+52487436 Msa0169280:CDS
GGTAAGAAGGCAATCCCATT+TGG 0.370830 1_4:+52485220 Msa0169280:intron
AGTAAAGGCAATCAAGTCTA+TGG 0.372158 1_4:-52489461 None:intergenic
CAAAATGCCAACAGAATAGA+TGG 0.394116 1_4:+52488691 Msa0169280:CDS
CTCTAGCTCCCACGGCGGCA+AGG 0.395446 1_4:-52484008 None:intergenic
CTTGCAGACAAATGACTATC+AGG 0.396859 1_4:-52494820 None:intergenic
ATTATCACTATGCTGCTGCC+TGG 0.397194 1_4:+52486019 Msa0169280:CDS
GAACAGGGCTTATGACATTC+TGG 0.398126 1_4:+52492724 Msa0169280:CDS
CCTAGTCACTAGGCGCATAA+TGG 0.399891 1_4:+52485496 Msa0169280:CDS
TACTTTGCAGCTTGAGAAGC+AGG 0.404455 1_4:+52487386 Msa0169280:intron
CTAATAAGAAAACCAGGAAC+AGG 0.405034 1_4:+52492708 Msa0169280:CDS
TAGGTTGCTCGCGGCCTTGT+TGG 0.405180 1_4:+52492927 Msa0169280:intron
AGCGATTCGATGACGTGGTC+AGG 0.405656 1_4:-52484305 None:intergenic
TTTCCTCACTGAGATAATAC+TGG 0.407293 1_4:+52489755 Msa0169280:CDS
AATGTCATAAGCCCTGTTCC+TGG 0.407903 1_4:-52492720 None:intergenic
CGAAGCTTGAGGTTCTGCTT+GGG 0.409869 1_4:+52489397 Msa0169280:CDS
CAAATGATAAAGATGATATT+GGG 0.410170 1_4:+52487622 Msa0169280:CDS
AGACATCACGGAGGCCCAAA+TGG 0.410616 1_4:-52485235 None:intergenic
GGATCAGCCCTTGTTGCAAT+GGG 0.414422 1_4:+52487123 Msa0169280:CDS
CTTGGTTAATTACTCGCAAC+AGG 0.414607 1_4:+52487668 Msa0169280:CDS
TCGAAGCTTGAGGTTCTGCT+TGG 0.418257 1_4:+52489396 Msa0169280:CDS
AGATGATGGTGGTTGTTTGC+AGG 0.419096 1_4:+52487776 Msa0169280:CDS
CGTCAAAGGTTTAGCTCGCT+TGG 0.420509 1_4:+52492977 Msa0169280:CDS
GCAGAGGTGTTGGTGGTTAA+CGG 0.421525 1_4:-52484165 None:intergenic
ATCTCAGTGAGGAAAACTTC+TGG 0.421709 1_4:-52489747 None:intergenic
CTCCAACAAACCTGCAATGC+TGG 0.421914 1_4:-52489004 None:intergenic
GGAGCTAGAGCTAGCTAGCC+AGG 0.430497 1_4:+52484021 Msa0169280:five_prime_UTR
CTAAAGGGAAAATCTTCATC+AGG 0.430536 1_4:-52486456 None:intergenic
CAGAGCCTGGTAGGGCTGGT+AGG 0.435386 1_4:+52494878 Msa0169280:CDS
TGGATCAGCCCTTGTTGCAA+TGG 0.440463 1_4:+52487122 Msa0169280:CDS
AGAGCCTGGTAGGGCTGGTA+GGG 0.440903 1_4:+52494879 Msa0169280:CDS
CAAAGGTAGGCATTCTTTCA+AGG 0.441898 1_4:-52485408 None:intergenic
AGATGATATTGGGCAAGATA+TGG 0.443019 1_4:+52487632 Msa0169280:CDS
AGGAACTAAGGGAGCCCAAC+AGG 0.447331 1_4:+52485367 Msa0169280:CDS
TGCTTGATCGGCAGAAAGTA+AGG 0.447864 1_4:+52494647 Msa0169280:CDS
TCTAGCTCCCACGGCGGCAA+GGG 0.450775 1_4:-52484007 None:intergenic
ACTGCTCGCTTGCTTGATGC+TGG 0.451373 1_4:+52485647 Msa0169280:CDS
AACAGAAAATTTGAGGGCAT+TGG 0.453453 1_4:+52487695 Msa0169280:CDS
CCATTATGCGCCTAGTGACT+AGG 0.453764 1_4:-52485496 None:intergenic
ATTTGATGATAAAGGAAAGC+AGG 0.455540 1_4:+52495205 Msa0169280:three_prime_UTR
TCGAGCAGGACAAATGTAGA+TGG 0.455711 1_4:-52493044 None:intergenic
GTAAGAAGGCAATCCCATTT+GGG 0.457342 1_4:+52485221 Msa0169280:CDS
GCAATCAAGTCTATGGCGTT+TGG 0.458967 1_4:-52489454 None:intergenic
CCGTCTGTTCCCTTTCCTCC+CGG 0.460840 1_4:-52494756 None:intergenic
TCTTCAGCTTCCAAATTCAA+TGG 0.460919 1_4:-52487171 None:intergenic
AAGCTGGTGGAGATATTAAG+AGG 0.462137 1_4:+52494932 Msa0169280:CDS
CTTGAAGGCAAGAGTGCCTC+TGG 0.463007 1_4:+52495075 Msa0169280:CDS
GTGTTGGTGGTTAACGGCGG+TGG 0.463079 1_4:-52484159 None:intergenic
CTGGGGAAGAAGGGAGGTTG+TGG 0.464578 1_4:-52484223 None:intergenic
TCCCTAATACGTCCAATCAT+AGG 0.465765 1_4:-52487282 None:intergenic
ACGGTTGCACTTATCATATG+TGG 0.468050 1_4:-52492957 None:intergenic
TGAATTGCATATGTCATCGT+TGG 0.468163 1_4:-52484114 None:intergenic
TTCCGGTACGATGCGGTTCA+AGG 0.471050 1_4:-52484273 None:intergenic
ACAGCAGAGCCTGGTAGGGC+TGG 0.471151 1_4:+52494874 Msa0169280:CDS
ATGAATCTCAATCAGTTCTC+AGG 0.474206 1_4:+52488749 Msa0169280:CDS
ATACCTTTGATTTCGAGTCT+TGG 0.476758 1_4:-52489548 None:intergenic
TTCATAGGGATAGTGTTCAT+TGG 0.476869 1_4:+52484492 Msa0169280:CDS
ATTTCGATTCCTTCCATGAT+CGG 0.478506 1_4:-52484065 None:intergenic
AGTATACCTCTCATAAAGTA+AGG 0.479237 1_4:-52486405 None:intergenic
CTGGATGAATCAAGGAGATC+AGG 0.479568 1_4:+52485949 Msa0169280:CDS
TAGACAAAACAAGAACATAA+AGG 0.479604 1_4:+52487596 Msa0169280:CDS
AAATATGCGACTGGGGAAGA+AGG 0.485097 1_4:-52484233 None:intergenic
CATTATGCGCCTAGTGACTA+GGG 0.486726 1_4:-52485495 None:intergenic
AGACACAGCTAAAAGCTTCA+AGG 0.487391 1_4:+52487491 Msa0169280:CDS
AAAGAAGAACCTGATATTCG+TGG 0.488875 1_4:+52487543 Msa0169280:CDS
TGGTCAGGTGGATTAGGTTC+CGG 0.488914 1_4:-52484290 None:intergenic
CCTAGCATCATATTCTGAAT+CGG 0.488966 1_4:-52494791 None:intergenic
TGAAGGACGTTTGATTATCC+GGG 0.489005 1_4:+52494738 Msa0169280:CDS
TCTCCTCGTCTCCAAATGCA+TGG 0.489991 1_4:-52492757 None:intergenic
TAGTTAGACCTGTTTCCTAA+AGG 0.491566 1_4:-52486472 None:intergenic
CTTGGACTGTTAAGAAGTAA+AGG 0.492219 1_4:-52489530 None:intergenic
CATCTCATCATCGTCTGACC+TGG 0.494658 1_4:-52494704 None:intergenic
TTCGCATTTGTTGATTCATA+GGG 0.495983 1_4:+52484478 Msa0169280:CDS
AGTCATTTGTCTGCAAGGTC+CGG 0.497944 1_4:+52494826 Msa0169280:CDS
TCTATAAACCCTTGCCGCCG+TGG 0.498802 1_4:+52483999 Msa0169280:five_prime_UTR
AGGTTGCAACAGAAAATTTG+AGG 0.498991 1_4:+52487688 Msa0169280:CDS
TCCTTCTTCAACACAGCTAC+GGG 0.499484 1_4:-52484362 None:intergenic
CAAGCGAGCTAAACCTTTGA+CGG 0.500697 1_4:-52492976 None:intergenic
AAATGCTGGTGAAGGAACTA+AGG 0.500927 1_4:+52485355 Msa0169280:CDS
TATTAGGGAGAAGGCTCAAA+AGG 0.501198 1_4:+52487296 Msa0169280:CDS
GAGTCGTCGGCCACAACATA+GGG 0.502468 1_4:+52495005 Msa0169280:CDS
CGGAGAAGAACAGCAGAGCC+TGG 0.503610 1_4:+52494865 Msa0169280:CDS
TTTGATTATCCGGGAGGAAA+GGG 0.504061 1_4:+52494747 Msa0169280:CDS
AGTGAGGAAAACTTCTGGCC+AGG 0.505041 1_4:-52489742 None:intergenic
GTTTGATTATCCGGGAGGAA+AGG 0.505910 1_4:+52494746 Msa0169280:CDS
CTCCTTGAACCGCATCGTAC+CGG 0.508711 1_4:+52484271 Msa0169280:CDS
ATGATAAGTGCAACCGTCAA+AGG 0.509071 1_4:+52492963 Msa0169280:CDS
GAGTTTGATTAAACAGGGAG+TGG 0.510391 1_4:+52485915 Msa0169280:CDS
CTCCTTCTTCAACACAGCTA+CGG 0.511006 1_4:-52484363 None:intergenic
TTGGATTCGTTGTTGAATGT+TGG 0.511127 1_4:-52484095 None:intergenic
GATCATGGAAGGAATCGAAA+TGG 0.513498 1_4:+52484067 Msa0169280:exon
GAAGAACAGCAGAGCCTGGT+AGG 0.515608 1_4:+52494869 Msa0169280:CDS
GAAGGATAGTTACAAAATGA+AGG 0.516245 1_4:-52487468 None:intergenic
TTAGATCTGAGAATCTCAAA+AGG 0.517424 1_4:+52494677 Msa0169280:CDS
TGAGTCGTCGGCCACAACAT+AGG 0.517871 1_4:+52495004 Msa0169280:CDS
AGATCAAGGAGCGGAAAGAG+AGG 0.518453 1_4:+52493604 Msa0169280:intron
GCTTATCACGAAGTGTGGAT+TGG 0.518922 1_4:+52493450 Msa0169280:CDS
GCATCATATTCTGAATCGGC+TGG 0.519730 1_4:-52494787 None:intergenic
GATCATTATTTGCAGGATGT+TGG 0.519934 1_4:+52489097 Msa0169280:intron
AGTTCTTACAACAGGTAAGA+AGG 0.519955 1_4:+52485207 Msa0169280:intron
CAATAACGCAGTCTTGAAGC+TGG 0.520527 1_4:-52495295 None:intergenic
CTGAAATCTACAAAAGATGA+TGG 0.520706 1_4:+52487762 Msa0169280:CDS
TCAAGTGGCCAATATGCATA+AGG 0.523498 1_4:-52494970 None:intergenic
TGGTGGAGATATTAAGAGGA+AGG 0.524645 1_4:+52494936 Msa0169280:CDS
CTGCCGACAGGATGATTCAA+TGG 0.525113 1_4:+52489719 Msa0169280:intron
TTCAGGTCCCATTGCAACAA+GGG 0.527489 1_4:-52487130 None:intergenic
CAACACCTCTGCACCGTCAT+CGG 0.530998 1_4:+52484176 Msa0169280:CDS
AAGTTCTCTCGATCATACTC+AGG 0.531090 1_4:+52489143 Msa0169280:CDS
GTGCAGCTTCATACGTGCCT+TGG 0.531128 1_4:+52487102 Msa0169280:intron
GCCCGTAGCTGTGTTGAAGA+AGG 0.531646 1_4:+52484361 Msa0169280:CDS
AGCCACTTGATTTGCTTGAT+CGG 0.532416 1_4:+52494635 Msa0169280:CDS
GACATCACGGAGGCCCAAAT+GGG 0.532838 1_4:-52485234 None:intergenic
GATAATACTGGCTCTTAAAG+AGG 0.532942 1_4:+52489767 Msa0169280:CDS
CTATAAACCCTTGCCGCCGT+GGG 0.534662 1_4:+52484000 Msa0169280:five_prime_UTR
GTCTGAACCATCTATTCTGT+TGG 0.538070 1_4:-52488698 None:intergenic
CGTCATCGGCGCAATGTCAC+AGG 0.538926 1_4:+52484190 Msa0169280:CDS
TATGGCCAAAGAACAAGTCT+TGG 0.539050 1_4:+52487650 Msa0169280:CDS
AGCAAGGTCAGAGAATTCAT+AGG 0.539362 1_4:-52493000 None:intergenic
CTCTCCGAATTCTTCGACGA+CGG 0.540604 1_4:-52484428 None:intergenic
CAAGAACATACAAAACCTGT+TGG 0.540635 1_4:-52485382 None:intergenic
AGATAACTCTGGATGAATCA+AGG 0.542333 1_4:+52485941 Msa0169280:CDS
TGTTGGTGTCATGCAGAAGA+AGG 0.543631 1_4:+52489114 Msa0169280:CDS
GTTGCGCCGAAATATGCGAC+TGG 0.543868 1_4:-52484242 None:intergenic
GACAGGATGATTCAATGGCC+TGG 0.544833 1_4:+52489724 Msa0169280:intron
AGAATCTCAAAAGGAAGTCC+AGG 0.546874 1_4:+52494686 Msa0169280:CDS
GGGATGCTTATCACGAAGTG+TGG 0.547145 1_4:+52493445 Msa0169280:CDS
ATTCCATTTCCGATCATGGA+AGG 0.548811 1_4:+52484056 Msa0169280:exon
TTATCACTATGCTGCTGCCT+GGG 0.549257 1_4:+52486020 Msa0169280:CDS
CACCTCAAGTAGTGCTTCAG+AGG 0.550298 1_4:-52485561 None:intergenic
GGTTGCAACAGAAAATTTGA+GGG 0.550727 1_4:+52487689 Msa0169280:CDS
TTTGCAGCAGCCCTATGTTG+TGG 0.551398 1_4:-52495015 None:intergenic
TCTTACTGATTCAAGACCGA+AGG 0.552941 1_4:+52484553 Msa0169280:CDS
GATTCGTCAGACAAGTGCTC+AGG 0.554011 1_4:-52494604 None:intergenic
TCAACTAACCTTGCGTATGT+TGG 0.557578 1_4:-52493518 None:intergenic
TTTCAAAAGCAACTACATCC+AGG 0.559469 1_4:+52493664 Msa0169280:CDS
CTGATAGTCATTTGTCTGCA+AGG 0.559535 1_4:+52494821 Msa0169280:CDS
CGCCCATGCATTTGGAGACG+AGG 0.560462 1_4:+52492754 Msa0169280:CDS
CTGTGACATTGCGCCGATGA+CGG 0.561333 1_4:-52484189 None:intergenic
TCAAATGAGATTTCTGGAGA+TGG 0.561668 1_4:+52485614 Msa0169280:CDS
CGATGACGGTGCAGAGGTGT+TGG 0.562762 1_4:-52484175 None:intergenic
TGGTTGAGTGTTTGTTTCAG+TGG 0.562799 1_4:+52493260 Msa0169280:CDS
CTCCTCGTCTCCAAATGCAT+GGG 0.565443 1_4:-52492756 None:intergenic
GCATTTGGAGACGAGGAGAA+AGG 0.567246 1_4:+52492761 Msa0169280:CDS
AAGAACATACAAAACCTGTT+GGG 0.567767 1_4:-52485381 None:intergenic
CAGGTCAGACGATGATGAGA+TGG 0.570043 1_4:+52494705 Msa0169280:CDS
AGGGACTGACAGTGTCATCA+AGG 0.571222 1_4:+52487406 Msa0169280:CDS
GATTGGACGTATTAGGGAGA+AGG 0.572003 1_4:+52487287 Msa0169280:CDS
TATGGCGTTTGGCAGAAGAA+TGG 0.572032 1_4:-52489443 None:intergenic
AATATGCGACTGGGGAAGAA+GGG 0.573040 1_4:-52484232 None:intergenic
TTTGGCATCTGAACATGAAG+AGG 0.575489 1_4:+52485837 Msa0169280:CDS
TATCACGAAGTGTGGATTGG+AGG 0.576082 1_4:+52493453 Msa0169280:CDS
GAACTCAACTTTGACTGCCT+CGG 0.577235 1_4:-52489508 None:intergenic
GGGAGTGGATCAGATAACTC+TGG 0.577650 1_4:+52485930 Msa0169280:CDS
CCGATTCAGAATATGATGCT+AGG 0.582895 1_4:+52494791 Msa0169280:CDS
CTAGCTAGCTCTAGCTCCCA+CGG 0.583705 1_4:-52484016 None:intergenic
TAAGCCCTACCAGCCCTACC+AGG 0.584920 1_4:-52494883 None:intergenic
TGCGTCAACCCCTAGTCACT+AGG 0.585009 1_4:+52485486 Msa0169280:CDS
AACTCTCCTTACTTTATGAG+AGG 0.585087 1_4:+52486399 Msa0169280:CDS
TACAGGCTAATAAGAAAACC+AGG 0.585447 1_4:+52492702 Msa0169280:intron
ACCTAATTTGTGAAACATTG+CGG 0.586553 1_4:-52486064 None:intergenic
GTAGCCAAATCACAAGCAGA+AGG 0.588275 1_4:+52493214 Msa0169280:CDS
AAGAACAGCAGAGCCTGGTA+GGG 0.589719 1_4:+52494870 Msa0169280:CDS
TTTCAGGTCCCATTGCAACA+AGG 0.591569 1_4:-52487131 None:intergenic
TTTGAGATCACTGAAAACAC+TGG 0.591847 1_4:-52485720 None:intergenic
GATTCGATGACGTGGTCAGG+TGG 0.592836 1_4:-52484302 None:intergenic
TTTGGAGACGAGGAGAAAGG+TGG 0.594862 1_4:+52492764 Msa0169280:CDS
TTGCGCCGAAATATGCGACT+GGG 0.595787 1_4:-52484241 None:intergenic
CTATTAGCATCTGCGAGTGA+AGG 0.596295 1_4:+52485281 Msa0169280:CDS
AATCAAAAGCAGTTAAAGCA+AGG 0.596980 1_4:-52493016 None:intergenic
TTGCAACAAGGGCTGATCCA+AGG 0.597962 1_4:-52487119 None:intergenic
TGACGGTGCAGAGGTGTTGG+TGG 0.598610 1_4:-52484172 None:intergenic
CTGCCTCGGACTTCATGACA+TGG 0.599170 1_4:-52489494 None:intergenic
ACTTTGCAGCTTGAGAAGCA+GGG 0.599256 1_4:+52487387 Msa0169280:intron
TTCGCAGTTTCATTGTTGCG+TGG 0.600713 1_4:+52488938 Msa0169280:CDS
TTGGAGACGAGGAGAAAGGT+GGG 0.601042 1_4:+52492765 Msa0169280:CDS
AATCATAGGCAAAATTTCGT+CGG 0.602575 1_4:-52487268 None:intergenic
GAAAGTTTATCAAGACATCA+CGG 0.603730 1_4:-52485247 None:intergenic
GAGTTTGATGGAGACAGCAA+AGG 0.604231 1_4:+52494211 Msa0169280:CDS
CCGGGAGGAAAGGGAACAGA+CGG 0.606596 1_4:+52494756 Msa0169280:CDS
AACGGCAAGGCAATTTCTAG+AGG 0.609750 1_4:+52494253 Msa0169280:CDS
TGGTAGGGCTTACACTGGAA+AGG 0.611286 1_4:+52494894 Msa0169280:CDS
GGTGGAGCAAATGCAAATGC+TGG 0.613071 1_4:+52485341 Msa0169280:CDS
GATGAGAGTTTGATTAAACA+GGG 0.613401 1_4:+52485910 Msa0169280:CDS
AGTCCAAGACTCGAAATCAA+AGG 0.613427 1_4:+52489545 Msa0169280:CDS
AATAACGCAGTCTTGAAGCT+GGG 0.613618 1_4:-52495294 None:intergenic
TTCCTCTGAAGCACTACTTG+AGG 0.615882 1_4:+52485559 Msa0169280:CDS
ACGGCAAGGCAATTTCTAGA+GGG 0.621924 1_4:+52494254 Msa0169280:CDS
GTAGCAGATTGATAGAGCCA+TGG 0.622425 1_4:+52495164 Msa0169280:three_prime_UTR
TGCCGATCAAGCAAATCAAG+TGG 0.625596 1_4:-52494637 None:intergenic
TTGCGCCGATGACGGTGCAG+AGG 0.626574 1_4:-52484181 None:intergenic
GAGCGGAAAGAGAGGAACCG+AGG 0.627235 1_4:+52493612 Msa0169280:CDS
TGCTGCTGATTTGAGATGTG+TGG 0.628832 1_4:-52494287 None:intergenic
GATTAGGTTCCGGTACGATG+CGG 0.630939 1_4:-52484280 None:intergenic
GGCAAGGCAATTTCTAGAGG+GGG 0.631149 1_4:+52494256 Msa0169280:CDS
AATGCTGGTGAAGGAACTAA+GGG 0.631940 1_4:+52485356 Msa0169280:CDS
TAATAAGAAAACCAGGAACA+GGG 0.632518 1_4:+52492709 Msa0169280:CDS
TCCAGAAATCTCATTTGATG+AGG 0.632522 1_4:-52485609 None:intergenic
GTCAGACGATGATGAGATGG+AGG 0.633184 1_4:+52494708 Msa0169280:CDS
TTGAGATCACTGAAAACACT+GGG 0.634526 1_4:-52485719 None:intergenic
GCAAATGCAAATGCTGGTGA+AGG 0.636144 1_4:+52485347 Msa0169280:CDS
GGAGGAAAGGGAACAGACGG+AGG 0.636748 1_4:+52494759 Msa0169280:CDS
GTGCTAAATCTGAAGAAACC+AGG 0.641226 1_4:+52493634 Msa0169280:CDS
ACTTCTGACCAACATACGCA+AGG 0.645110 1_4:+52493510 Msa0169280:CDS
CGGCAAGGCAATTTCTAGAG+GGG 0.645153 1_4:+52494255 Msa0169280:CDS
GAGCTAGAGCTAGCTAGCCA+GGG 0.645388 1_4:+52484022 Msa0169280:five_prime_UTR
TGGAATTGAACAGTAAACCC+TGG 0.646580 1_4:-52484039 None:intergenic
GAGATGGAGGTAGATTCTGA+AGG 0.647548 1_4:+52494721 Msa0169280:CDS
ATGCGACTGGGGAAGAAGGG+AGG 0.648895 1_4:-52484229 None:intergenic
TTTCTTCAGATTTAGCACCT+CGG 0.650186 1_4:-52493629 None:intergenic
AGTTCTCTCGATCATACTCA+GGG 0.654484 1_4:+52489144 Msa0169280:CDS
AGGGCTGGTAGGGCTTACAC+TGG 0.665086 1_4:+52494889 Msa0169280:CDS
AATACACTTACAGTAAACCA+TGG 0.666124 1_4:-52495181 None:intergenic
TTGTGAGCTTAGGTTGCTCG+CGG 0.669687 1_4:+52492918 Msa0169280:intron
TGCAGAATACCTGAACGGCA+AGG 0.670993 1_4:+52494240 Msa0169280:CDS
CCGGAACTAAAGCCCAAAAG+CGG 0.676318 1_4:+52494845 Msa0169280:CDS
TTGTAAAACAGATCAAGGAG+CGG 0.680605 1_4:+52493595 Msa0169280:intron
AGGACGTTTGATTATCCGGG+AGG 0.685208 1_4:+52494741 Msa0169280:CDS
AGTGATGCAGAATACCTGAA+CGG 0.696328 1_4:+52494235 Msa0169280:CDS
AAATCTACAAAAGATGATGG+TGG 0.698268 1_4:+52487765 Msa0169280:CDS
CGGTACGATGCGGTTCAAGG+AGG 0.699527 1_4:-52484270 None:intergenic
CTTCATAGAAAGCACGCCAG+AGG 0.701114 1_4:-52495091 None:intergenic
TTAAAAGCGATTCGATGACG+TGG 0.701711 1_4:-52484310 None:intergenic
ACTCCATGTCATGAAGTCCG+AGG 0.707627 1_4:+52489491 Msa0169280:CDS
ATTATGCGCCTAGTGACTAG+GGG 0.709999 1_4:-52485494 None:intergenic
AAAGAATAAAGAGATAACCA+AGG 0.711747 1_4:+52493070 Msa0169280:CDS
TGCGCCGAAATATGCGACTG+GGG 0.717004 1_4:-52484240 None:intergenic
GAGGTGTTGGTGGTTAACGG+CGG 0.724078 1_4:-52484162 None:intergenic
GCAAATGCATCTGAAGAGCG+TGG 0.729213 1_4:+52493240 Msa0169280:CDS
CGTTTGGCAGAAGAATGGCA+AGG 0.732352 1_4:-52489438 None:intergenic
GAGCCAGTATTATCTCAGTG+AGG 0.735723 1_4:-52489758 None:intergenic
GCTAGCTCTAGCTCCCACGG+CGG 0.779006 1_4:-52484013 None:intergenic
AGTTTATCAAGACATCACGG+AGG 0.840719 1_4:-52485244 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAATATTAAAAATT+GGG - chr1_4:52492001-52492020 None:intergenic 0.0%
!! AAAATAAAAATATTAAAAAT+TGG - chr1_4:52492002-52492021 None:intergenic 0.0%
!!! ATTTTAAATTTTAAATGTTG+TGG + chr1_4:52485095-52485114 Msa0169280:intron 10.0%
!!! TTATAATTTATATAGTTTGT+TGG + chr1_4:52486130-52486149 Msa0169280:intron 10.0%
!! ATAGAAATAGAAATTATATA+TGG + chr1_4:52488376-52488395 Msa0169280:intron 10.0%
!!! AATTATCTTATTTGATTTTT+CGG + chr1_4:52488862-52488881 Msa0169280:intron 10.0%
!!! CTAATTTTCAATATTATTAA+GGG - chr1_4:52491806-52491825 None:intergenic 10.0%
!!! ACTAATTTTCAATATTATTA+AGG - chr1_4:52491807-52491826 None:intergenic 10.0%
!! TGTTAAAAATATGAATAAAT+AGG - chr1_4:52493387-52493406 None:intergenic 10.0%
!!! GTTTTCAATTGTTATTTATA+AGG + chr1_4:52484923-52484942 Msa0169280:intron 15.0%
!!! TTGATTTGTTTTCTAAATTA+TGG + chr1_4:52485157-52485176 Msa0169280:intron 15.0%
!!! TATTTACCTGTTTTTTTTTT+TGG + chr1_4:52485775-52485794 Msa0169280:intron 15.0%
!! AAAAAATCTAACAGAAAAAA+CGG - chr1_4:52486227-52486246 None:intergenic 15.0%
!! TCATATCATACATATTAAAA+TGG + chr1_4:52486747-52486766 Msa0169280:intron 15.0%
!! CATATCATACATATTAAAAT+GGG + chr1_4:52486748-52486767 Msa0169280:intron 15.0%
!! ATTTCTATATTCATAATTGA+AGG - chr1_4:52488364-52488383 None:intergenic 15.0%
!! AAAATCAAATAAGATAATTC+AGG - chr1_4:52488861-52488880 None:intergenic 15.0%
!! AATAAGAAAAATCAAATAGT+AGG - chr1_4:52489183-52489202 None:intergenic 15.0%
!!! TTAAATGAAATTTTCATGTT+GGG - chr1_4:52490167-52490186 None:intergenic 15.0%
!!! TTTAAATGAAATTTTCATGT+TGG - chr1_4:52490168-52490187 None:intergenic 15.0%
!! ACTTCAATTAAATCATAAAA+TGG + chr1_4:52490222-52490241 Msa0169280:intron 15.0%
!! AAATAATCGAATAATTAAGA+CGG + chr1_4:52492204-52492223 Msa0169280:intron 15.0%
!!! GTATTTAGTTTTTAAGTAAT+AGG + chr1_4:52492488-52492507 Msa0169280:intron 15.0%
!!! ATTTGATTTTAGTTATTATG+TGG + chr1_4:52492572-52492591 Msa0169280:intron 15.0%
!!! TTTGATTTTAGTTATTATGT+GGG + chr1_4:52492573-52492592 Msa0169280:intron 15.0%
!!! AATTTTGAAGTTATTTTTAC+AGG + chr1_4:52492685-52492704 Msa0169280:intron 15.0%
!! AATATTTAATTAATAGCTCA+AGG - chr1_4:52493151-52493170 None:intergenic 15.0%
!! AAAAATATGAATAAATAGGT+TGG - chr1_4:52493383-52493402 None:intergenic 15.0%
!!! ATTTTGATAATTCTTTTATG+TGG + chr1_4:52493546-52493565 Msa0169280:intron 15.0%
!! AATTAGCATATATATTTGAA+AGG - chr1_4:52493791-52493810 None:intergenic 15.0%
!!! ATATATTAGTTCTATGATTA+GGG + chr1_4:52494033-52494052 Msa0169280:intron 15.0%
!! TTATTTGATATTGCATAAAT+TGG + chr1_4:52494435-52494454 Msa0169280:intron 15.0%
!! AATCAACAAAAAAAAAAACG+AGG - chr1_4:52484600-52484619 None:intergenic 20.0%
!! AAATGTTTGTAATAACTTGA+TGG + chr1_4:52484662-52484681 Msa0169280:intron 20.0%
!!! CACAATTTTTTTCAATGAAA+AGG + chr1_4:52484895-52484914 Msa0169280:intron 20.0%
!! AAAAATCTAACAGAAAAAAC+GGG - chr1_4:52486226-52486245 None:intergenic 20.0%
!! TGAAATTATGTGAAATTGTA+AGG - chr1_4:52486307-52486326 None:intergenic 20.0%
!!! ATTTTACACTGTATTATTTG+AGG - chr1_4:52486332-52486351 None:intergenic 20.0%
!! TAGATACTGTTCATATAATT+GGG - chr1_4:52486601-52486620 None:intergenic 20.0%
!! TTAGATACTGTTCATATAAT+TGG - chr1_4:52486602-52486621 None:intergenic 20.0%
!!! ATTGAATTTCTATTGATTCA+TGG + chr1_4:52486905-52486924 Msa0169280:intron 20.0%
!!! TTGAATTTCTATTGATTCAT+GGG + chr1_4:52486906-52486925 Msa0169280:intron 20.0%
!!! ATTGAATTTCTATTGATTCA+TGG + chr1_4:52486905-52486924 Msa0169280:intron 20.0%
!!! TTGAATTTCTATTGATTCAT+GGG + chr1_4:52486906-52486925 Msa0169280:intron 20.0%
!! ATTTATCTGTGTCAAATATA+TGG + chr1_4:52487193-52487212 Msa0169280:CDS 20.0%
!!! ACAATATGCTGTTTTAAAAT+GGG - chr1_4:52487225-52487244 None:intergenic 20.0%
!!! AACAATATGCTGTTTTAAAA+TGG - chr1_4:52487226-52487245 None:intergenic 20.0%
!!! ATTTTAAAACAGCATATTGT+TGG + chr1_4:52487225-52487244 Msa0169280:CDS 20.0%
!! TCAAATGATAAAGATGATAT+TGG + chr1_4:52487621-52487640 Msa0169280:CDS 20.0%
!! CAAATGATAAAGATGATATT+GGG + chr1_4:52487622-52487641 Msa0169280:CDS 20.0%
!! TATAATAAAAGCTGAAACAT+GGG - chr1_4:52487984-52488003 None:intergenic 20.0%
!!! TATTTTAAAGACAATGATTC+AGG + chr1_4:52488075-52488094 Msa0169280:intron 20.0%
!!! ATTTTAAAGACAATGATTCA+GGG + chr1_4:52488076-52488095 Msa0169280:intron 20.0%
!! ATTGAAGTAAATATATGACA+AGG + chr1_4:52488231-52488250 Msa0169280:intron 20.0%
!! TTGAAGTAAATATATGACAA+GGG + chr1_4:52488232-52488251 Msa0169280:intron 20.0%
!! TCAGATTAATGAAGATATTT+CGG - chr1_4:52488421-52488440 None:intergenic 20.0%
!! TGAGGAATGAAATTAAAAAA+TGG - chr1_4:52488475-52488494 None:intergenic 20.0%
!!! ATGATTTTACTTCATTTACA+GGG + chr1_4:52488580-52488599 Msa0169280:intron 20.0%
!! TATTAAAATAAATGCTACGT+GGG - chr1_4:52489845-52489864 None:intergenic 20.0%
!! TTATTAAAATAAATGCTACG+TGG - chr1_4:52489846-52489865 None:intergenic 20.0%
!! AGTATACTTGTATATTTCTT+GGG + chr1_4:52489913-52489932 Msa0169280:intron 20.0%
!!! ACTTATGAGATTTTTCAATA+AGG - chr1_4:52490342-52490361 None:intergenic 20.0%
!!! TATTAAGGGTATAATTCTAT+AGG - chr1_4:52491792-52491811 None:intergenic 20.0%
!! GATTTATAACTGAATTATGA+GGG - chr1_4:52492098-52492117 None:intergenic 20.0%
!! TGATTTATAACTGAATTATG+AGG - chr1_4:52492099-52492118 None:intergenic 20.0%
!! TATGATTTATGAAGTTGAAT+GGG - chr1_4:52492127-52492146 None:intergenic 20.0%
!! TTATGATTTATGAAGTTGAA+TGG - chr1_4:52492128-52492147 None:intergenic 20.0%
!! AATAATCGAATAATTAAGAC+GGG + chr1_4:52492205-52492224 Msa0169280:intron 20.0%
!!! AGATATAACAATTTTACTCA+GGG - chr1_4:52492419-52492438 None:intergenic 20.0%
!!! AAGATATAACAATTTTACTC+AGG - chr1_4:52492420-52492439 None:intergenic 20.0%
!!! TTAGTTTTTAAGTAATAGGA+TGG + chr1_4:52492492-52492511 Msa0169280:intron 20.0%
!!! TAGTTTTTAAGTAATAGGAT+GGG + chr1_4:52492493-52492512 Msa0169280:intron 20.0%
!! AAAATAAAGATGAAAAAGCA+CGG - chr1_4:52492844-52492863 None:intergenic 20.0%
!!! TGTTTCATTTTCTATTTTGT+TGG + chr1_4:52493095-52493114 Msa0169280:intron 20.0%
!!! CTTTGCTTTAAAATGATTTT+TGG - chr1_4:52493296-52493315 None:intergenic 20.0%
!!! CAAAAATCATTTTAAAGCAA+AGG + chr1_4:52493294-52493313 Msa0169280:CDS 20.0%
!! TGAATAAAGGAAATAAATAC+AGG - chr1_4:52493697-52493716 None:intergenic 20.0%
!!! CATATATTAGTTCTATGATT+AGG + chr1_4:52494032-52494051 Msa0169280:intron 20.0%
!! ATATTGTGCTATAATGAATT+TGG + chr1_4:52494108-52494127 Msa0169280:intron 20.0%
!!! GTGTATTTATTTGATGATAA+AGG + chr1_4:52495197-52495216 Msa0169280:three_prime_UTR 20.0%
! AAAAATTGTGAGCAAAATGA+CGG - chr1_4:52484885-52484904 None:intergenic 25.0%
! TATATTGGAATGTTAAGAGA+TGG - chr1_4:52484985-52485004 None:intergenic 25.0%
! AATTATGGTATATACTTGAG+TGG + chr1_4:52485172-52485191 Msa0169280:intron 25.0%
! TAGTTGCCAAAAAAAAAAAC+AGG - chr1_4:52485784-52485803 None:intergenic 25.0%
!!! GTTTTTTTTTTTGGCAACTA+TGG + chr1_4:52485784-52485803 Msa0169280:intron 25.0%
!! TTTACTTTGTGCAGATATTT+TGG + chr1_4:52485819-52485838 Msa0169280:intron 25.0%
!! CAAATTTTCTCAATAATGGT+TGG - chr1_4:52485976-52485995 None:intergenic 25.0%
!! TGCACAAATTTTCTCAATAA+TGG - chr1_4:52485980-52485999 None:intergenic 25.0%
! AAAAATCTAACAGAAAAACC+GGG - chr1_4:52486284-52486303 None:intergenic 25.0%
! GAAAAATCTAACAGAAAAAC+CGG - chr1_4:52486285-52486304 None:intergenic 25.0%
!!! AAGACATTCTACTTTTTTAC+AGG - chr1_4:52486634-52486653 None:intergenic 25.0%
! TGATGATTTCAAAAGCAAAT+AGG + chr1_4:52486677-52486696 Msa0169280:intron 25.0%
! AACCAACTTGATTATGATAT+TGG - chr1_4:52486992-52487011 None:intergenic 25.0%
! ATAAAGGATAAGAAAGTTTC+AGG - chr1_4:52487150-52487169 None:intergenic 25.0%
! ATCCTTTATACCATTGAATT+TGG + chr1_4:52487161-52487180 Msa0169280:CDS 25.0%
! TTCCAAATTCAATGGTATAA+AGG - chr1_4:52487166-52487185 None:intergenic 25.0%
! TAGACAAAACAAGAACATAA+AGG + chr1_4:52487596-52487615 Msa0169280:CDS 25.0%
! GTATAATAAAAGCTGAAACA+TGG - chr1_4:52487985-52488004 None:intergenic 25.0%
!!! TTCACTCATGGTATTTTAAT+TGG + chr1_4:52488031-52488050 Msa0169280:intron 25.0%
! TGAAGTAAATATATGACAAG+GGG + chr1_4:52488233-52488252 Msa0169280:intron 25.0%
!!! ATGAAGTACTCTTTTTTACT+TGG + chr1_4:52488529-52488548 Msa0169280:intron 25.0%
! TACTTGGTTTCTTGATATAT+AGG + chr1_4:52488545-52488564 Msa0169280:intron 25.0%
!! GATGATTTTACTTCATTTAC+AGG + chr1_4:52488579-52488598 Msa0169280:intron 25.0%
!!! CATTTTGAGTACATTTTAAG+AGG - chr1_4:52488678-52488697 None:intergenic 25.0%
! TTCAAATAGAAAAGTTACGA+TGG + chr1_4:52489067-52489086 Msa0169280:intron 25.0%
! TTATTGTGATCATTATTTGC+AGG + chr1_4:52489090-52489109 Msa0169280:intron 25.0%
! TTGGTTAAAATGTTCAATCA+CGG + chr1_4:52489233-52489252 Msa0169280:intron 25.0%
!!! AAATCAAAGGTATCCAAAAT+TGG + chr1_4:52489558-52489577 Msa0169280:intron 25.0%
!!! AATCAAAGGTATCCAAAATT+GGG + chr1_4:52489559-52489578 Msa0169280:intron 25.0%
!! TTGAATCAGTGTATTTCTTT+TGG + chr1_4:52489866-52489885 Msa0169280:intron 25.0%
! CAGTATACTTGTATATTTCT+TGG + chr1_4:52489912-52489931 Msa0169280:intron 25.0%
!! AAATTTTCATGTTGGGAAAA+CGG - chr1_4:52490160-52490179 None:intergenic 25.0%
! TTTCATGATGTTGAATTTGA+AGG - chr1_4:52490262-52490281 None:intergenic 25.0%
! AAAATCTTAAACTATTGCAG+CGG + chr1_4:52490280-52490299 Msa0169280:intron 25.0%
! AGTTCAACATTTAAAAGTCT+TGG + chr1_4:52490308-52490327 Msa0169280:intron 25.0%
!! AGTTGTTAAATGCGTTTTAT+TGG - chr1_4:52490561-52490580 None:intergenic 25.0%
! TTTGTGATGAGAATTAGTAA+TGG - chr1_4:52490657-52490676 None:intergenic 25.0%
! AATGTGTTAACATTCACATA+AGG + chr1_4:52491142-52491161 Msa0169280:intron 25.0%
! GATGATAATTAGATGCTATT+TGG - chr1_4:52491637-52491656 None:intergenic 25.0%
! ATCATCTTAAGTCATATCTA+AGG + chr1_4:52491651-52491670 Msa0169280:intron 25.0%
!! AAACATAATACGTACGTTTT+TGG - chr1_4:52491907-52491926 None:intergenic 25.0%
! TAGTAGTGATAAGAGTAATT+AGG - chr1_4:52491957-52491976 None:intergenic 25.0%
! ATTCAAGGAGTAAATAAACT+CGG + chr1_4:52492281-52492300 Msa0169280:intron 25.0%
! CCTTGATAAAAAATTGATAG+AGG - chr1_4:52492802-52492821 None:intergenic 25.0%
!!! CCTCTATCAATTTTTTATCA+AGG + chr1_4:52492799-52492818 Msa0169280:CDS 25.0%
! AAATCAAATTACTGTTGGTA+TGG - chr1_4:52492889-52492908 None:intergenic 25.0%
! AAAGAATAAAGAGATAACCA+AGG + chr1_4:52493070-52493089 Msa0169280:CDS 25.0%
! ATAGAAAATGAAACAAACCT+TGG - chr1_4:52493090-52493109 None:intergenic 25.0%
! AACCTTTAATAAACCAAGAT+TGG - chr1_4:52493191-52493210 None:intergenic 25.0%
!!! TTTCATTGATTTGTTGAAGA+TGG + chr1_4:52493342-52493361 Msa0169280:intron 25.0%
!!! AGAAGTTTTATATGTTCTTC+AGG - chr1_4:52493496-52493515 None:intergenic 25.0%
!! GTTCTCTTCATTTTGAATAA+AGG - chr1_4:52493710-52493729 None:intergenic 25.0%
! TAAATTCAAAATCTCACAGA+GGG - chr1_4:52493750-52493769 None:intergenic 25.0%
! ATAAATTCAAAATCTCACAG+AGG - chr1_4:52493751-52493770 None:intergenic 25.0%
!!! GAACCATACTGATATTTTTT+CGG + chr1_4:52494189-52494208 Msa0169280:CDS 25.0%
!!! GTTAGTTGAAATTGATTTTC+AGG - chr1_4:52494532-52494551 None:intergenic 25.0%
!!! ATTGTTTTTTAGTCTCATCT+TGG - chr1_4:52494581-52494600 None:intergenic 25.0%
! CTAAAAAGAACTCAAAAGAA+AGG + chr1_4:52495123-52495142 Msa0169280:CDS 25.0%
!! TTTCGCATTTGTTGATTCAT+AGG + chr1_4:52484477-52484496 Msa0169280:CDS 30.0%
!! TTCGCATTTGTTGATTCATA+GGG + chr1_4:52484478-52484497 Msa0169280:CDS 30.0%
AATTCATGAATCGATACCTT+CGG - chr1_4:52484572-52484591 None:intergenic 30.0%
! ACTTGATGGTTACTATTGAT+TGG + chr1_4:52484676-52484695 Msa0169280:intron 30.0%
ACGTGTTTATTGCTCTATAT+TGG - chr1_4:52485000-52485019 None:intergenic 30.0%
!! TTTTAAATGTTGTGGACTGT+TGG + chr1_4:52485103-52485122 Msa0169280:intron 30.0%
! TTTAAATGTTGTGGACTGTT+GGG + chr1_4:52485104-52485123 Msa0169280:intron 30.0%
GAAAGTTTATCAAGACATCA+CGG - chr1_4:52485250-52485269 None:intergenic 30.0%
AAGAACATACAAAACCTGTT+GGG - chr1_4:52485384-52485403 None:intergenic 30.0%
! TTGTCTTTTAGTGACAACAA+AGG - chr1_4:52485428-52485447 None:intergenic 30.0%
!!! AGAAAGTTTTTTCTCTGAAC+AGG + chr1_4:52485675-52485694 Msa0169280:CDS 30.0%
TGATGAGAGTTTGATTAAAC+AGG + chr1_4:52485909-52485928 Msa0169280:CDS 30.0%
GATGAGAGTTTGATTAAACA+GGG + chr1_4:52485910-52485929 Msa0169280:CDS 30.0%
! ACCTAATTTGTGAAACATTG+CGG - chr1_4:52486067-52486086 None:intergenic 30.0%
ATTACTGCTATATTCAATGC+AGG + chr1_4:52486372-52486391 Msa0169280:intron 30.0%
AGTATACCTCTCATAAAGTA+AGG - chr1_4:52486408-52486427 None:intergenic 30.0%
!!! TTTTGAGTTTCGTATTTGTG+TGG - chr1_4:52486530-52486549 None:intergenic 30.0%
TTGTCACAGAATAACTAACA+GGG - chr1_4:52486716-52486735 None:intergenic 30.0%
TTTGTCACAGAATAACTAAC+AGG - chr1_4:52486717-52486736 None:intergenic 30.0%
TTGATTCATGGGAATTTGAA+TGG + chr1_4:52486946-52486965 Msa0169280:intron 30.0%
!!! TGGTTTCCTGGTATTTTTTT+TGG + chr1_4:52486966-52486985 Msa0169280:intron 30.0%
TATTGGCCAAAAAAAATACC+AGG - chr1_4:52486975-52486994 None:intergenic 30.0%
!!! ATCAAGTTGGTTTTTGTTAG+AGG + chr1_4:52487000-52487019 Msa0169280:intron 30.0%
AATCATAGGCAAAATTTCGT+CGG - chr1_4:52487271-52487290 None:intergenic 30.0%
GAAGGATAGTTACAAAATGA+AGG - chr1_4:52487471-52487490 None:intergenic 30.0%
CATATTATTCCACGAATATC+AGG - chr1_4:52487555-52487574 None:intergenic 30.0%
! ATTAACCAAGACTTGTTCTT+TGG - chr1_4:52487658-52487677 None:intergenic 30.0%
! CATCATCTTTTGTAGATTTC+AGG - chr1_4:52487764-52487783 None:intergenic 30.0%
CTGAAATCTACAAAAGATGA+TGG + chr1_4:52487762-52487781 Msa0169280:CDS 30.0%
! AAATCTACAAAAGATGATGG+TGG + chr1_4:52487765-52487784 Msa0169280:CDS 30.0%
ATGTTGGCATAACATAAAAC+TGG + chr1_4:52487873-52487892 Msa0169280:intron 30.0%
!!! CATGGTATTTTAATTGGTTG+AGG + chr1_4:52488037-52488056 Msa0169280:intron 30.0%
ATATTCATAATTGAAGGACG+TGG - chr1_4:52488358-52488377 None:intergenic 30.0%
!!! GATTGATTTTTTCGTGAAGT+TGG + chr1_4:52488806-52488825 Msa0169280:intron 30.0%
! ATAGAATTTCTTTTCATCCC+AGG + chr1_4:52488900-52488919 Msa0169280:intron 30.0%
! TAGAATTTCTTTTCATCCCA+GGG + chr1_4:52488901-52488920 Msa0169280:intron 30.0%
AATTTCAGTAATTCCTTGCA+AGG - chr1_4:52489042-52489061 None:intergenic 30.0%
TGGTTAAAATGTTCAATCAC+GGG + chr1_4:52489234-52489253 Msa0169280:intron 30.0%
! GCAGAAATGTTTTTCTAACA+TGG - chr1_4:52489323-52489342 None:intergenic 30.0%
! CATGGAGTATCAAAAAGTAA+AGG - chr1_4:52489479-52489498 None:intergenic 30.0%
! ACAACAAAAGTGTGCATTAA+GGG - chr1_4:52489605-52489624 None:intergenic 30.0%
!!! ATCCACACATTTTTTAGGTT+TGG + chr1_4:52489945-52489964 Msa0169280:intron 30.0%
!!! TCCACACATTTTTTAGGTTT+GGG + chr1_4:52489946-52489965 Msa0169280:intron 30.0%
TTCATCTTAGTGTTTACACA+TGG - chr1_4:52490125-52490144 None:intergenic 30.0%
! AATTTTCATGTTGGGAAAAC+GGG - chr1_4:52490159-52490178 None:intergenic 30.0%
!!! TCAGAGTATTTTGATCACAA+CGG + chr1_4:52490189-52490208 Msa0169280:intron 30.0%
AAATGCATTTGCATATCAAG+AGG - chr1_4:52490777-52490796 None:intergenic 30.0%
TCTTGATATGCAAATGCATT+TGG + chr1_4:52490776-52490795 Msa0169280:intron 30.0%
CTAATTACGCTCATATAAGT+TGG - chr1_4:52490829-52490848 None:intergenic 30.0%
CAACTTATATGAGCGTAATT+AGG + chr1_4:52490827-52490846 Msa0169280:intron 30.0%
!!! AGTTGTGATTTTTAGGTTTC+TGG - chr1_4:52491587-52491606 None:intergenic 30.0%
! GGTGAAAAGTTGTGATTTTT+AGG - chr1_4:52491594-52491613 None:intergenic 30.0%
GATGAAGGAATCATGAATAT+AGG - chr1_4:52491615-52491634 None:intergenic 30.0%
! ATTAGATGCTATTTGGATGA+AGG - chr1_4:52491630-52491649 None:intergenic 30.0%
TTTGGTGAGAATTGAGAATT+AGG - chr1_4:52491743-52491762 None:intergenic 30.0%
! AGCATGATTAGGTTAAGTTT+TGG - chr1_4:52491761-52491780 None:intergenic 30.0%
AGGATGAATTTAGCATGATT+AGG - chr1_4:52491772-52491791 None:intergenic 30.0%
ATTTCATCATAACCAGGTAA+GGG - chr1_4:52491834-52491853 None:intergenic 30.0%
! TTATGAGGGATATTTTGTTG+TGG - chr1_4:52492084-52492103 None:intergenic 30.0%
ATCCAAAATGATGGTATTCA+AGG + chr1_4:52492266-52492285 Msa0169280:intron 30.0%
TTCAAGGAGTAAATAAACTC+GGG + chr1_4:52492282-52492301 Msa0169280:intron 30.0%
TTGAAGTAATATGTGCTTGT+TGG - chr1_4:52492381-52492400 None:intergenic 30.0%
GCTTGTGAAGTTAATTTAGA+TGG - chr1_4:52492651-52492670 None:intergenic 30.0%
TAATAAGAAAACCAGGAACA+GGG + chr1_4:52492709-52492728 Msa0169280:CDS 30.0%
AATTACTGTTGGTATGGTTA+AGG - chr1_4:52492883-52492902 None:intergenic 30.0%
GCACAAAATCAAATTACTGT+TGG - chr1_4:52492894-52492913 None:intergenic 30.0%
AATCAAAAGCAGTTAAAGCA+AGG - chr1_4:52493019-52493038 None:intergenic 30.0%
!!! CTTTATTCTTTTTTTCGAGC+AGG - chr1_4:52493061-52493080 None:intergenic 30.0%
!! AATATTTGTTTTCTCCGTGT+AGG + chr1_4:52493165-52493184 Msa0169280:intron 30.0%
! GCGTCATTCAAATTATTTTC+AGG + chr1_4:52493408-52493427 Msa0169280:intron 30.0%
!! TTTCAGGTCAAACTTCTTTT+AGG + chr1_4:52493424-52493443 Msa0169280:intron 30.0%
! TTCAGGTCAAACTTCTTTTA+GGG + chr1_4:52493425-52493444 Msa0169280:intron 30.0%
TCCATTTGTAAAACAGATCA+AGG + chr1_4:52493590-52493609 Msa0169280:intron 30.0%
! TCCTTGATCTGTTTTACAAA+TGG - chr1_4:52493594-52493613 None:intergenic 30.0%
ATAAATACAGGATGAATACC+TGG - chr1_4:52493685-52493704 None:intergenic 30.0%
ATTTATCCACTTACATGTAG+TGG + chr1_4:52493765-52493784 Msa0169280:intron 30.0%
TTGAAGTTTAGTGAACTTCT+AGG + chr1_4:52493822-52493841 Msa0169280:intron 30.0%
TGAAGTTTAGTGAACTTCTA+GGG + chr1_4:52493823-52493842 Msa0169280:intron 30.0%
TGAAGTTTAGTGAACTTCTA+CGG + chr1_4:52493823-52493842 Msa0169280:intron 30.0%
TATCAATAACGATGCAAGAA+TGG + chr1_4:52493889-52493908 Msa0169280:intron 30.0%
TGTGCATATCTTAAGATTAG+CGG - chr1_4:52493932-52493951 None:intergenic 30.0%
!! GAAAAAGTGCGTCAATTTTT+GGG - chr1_4:52493988-52494007 None:intergenic 30.0%
!! AGAAAAAGTGCGTCAATTTT+TGG - chr1_4:52493989-52494008 None:intergenic 30.0%
!!! TCTTTTTCAGGAAAAGTAGA+TGG + chr1_4:52494167-52494186 Msa0169280:intron 30.0%
ACTCCGAAAAAATATCAGTA+TGG - chr1_4:52494195-52494214 None:intergenic 30.0%
!!! GATATTTTTTCGGAGTTTGA+TGG + chr1_4:52494199-52494218 Msa0169280:CDS 30.0%
ATACTTGAAGTCTTCATTCT+TGG + chr1_4:52494385-52494404 Msa0169280:intron 30.0%
GGTTCTTGATTAGTAATAAC+CGG + chr1_4:52494462-52494481 Msa0169280:intron 30.0%
CTTTATGCTATTGTAGGTTA+CGG - chr1_4:52494506-52494525 None:intergenic 30.0%
TTAGATCTGAGAATCTCAAA+AGG + chr1_4:52494677-52494696 Msa0169280:CDS 30.0%
CTGTGGTAAATATGACAAAA+AGG + chr1_4:52495052-52495071 Msa0169280:CDS 30.0%
AATATGACAAAAAGGCTTGA+AGG + chr1_4:52495060-52495079 Msa0169280:CDS 30.0%
AATACACTTACAGTAAACCA+TGG - chr1_4:52495184-52495203 None:intergenic 30.0%
! ATTTGATGATAAAGGAAAGC+AGG + chr1_4:52495205-52495224 Msa0169280:three_prime_UTR 30.0%
! ATAAAGGAAAGCAGGTTTTT+GGG + chr1_4:52495213-52495232 Msa0169280:three_prime_UTR 30.0%
TTCAATTCCATTTCCGATCA+TGG + chr1_4:52484052-52484071 Msa0169280:exon 35.0%
ATTTCGATTCCTTCCATGAT+CGG - chr1_4:52484068-52484087 None:intergenic 35.0%
TTGGATTCGTTGTTGAATGT+TGG - chr1_4:52484098-52484117 None:intergenic 35.0%
TGAATTGCATATGTCATCGT+TGG - chr1_4:52484117-52484136 None:intergenic 35.0%
TTCATAGGGATAGTGTTCAT+TGG + chr1_4:52484492-52484511 Msa0169280:CDS 35.0%
! ACGTTGTTCAATCTTTTGCT+GGG + chr1_4:52484527-52484546 Msa0169280:CDS 35.0%
! TACTATTGATTGGAGCTATG+TGG + chr1_4:52484686-52484705 Msa0169280:intron 35.0%
GGCAATGTACAACTTGTATT+AGG - chr1_4:52484820-52484839 None:intergenic 35.0%
TACAAGTTGTACATTGCCTT+TGG + chr1_4:52484822-52484841 Msa0169280:intron 35.0%
ACGTTGTTCATGTAATAGCT+GGG + chr1_4:52485016-52485035 Msa0169280:intron 35.0%
TTCATGTAATAGCTGGGATT+GGG + chr1_4:52485022-52485041 Msa0169280:intron 35.0%
ACAAGCTCAGCAAATTAGAA+TGG - chr1_4:52485058-52485077 None:intergenic 35.0%
! TTAAATGTTGTGGACTGTTG+GGG + chr1_4:52485105-52485124 Msa0169280:intron 35.0%
AGTTCTTACAACAGGTAAGA+AGG + chr1_4:52485207-52485226 Msa0169280:intron 35.0%
GTGTCAAAAACCTACTTGAA+AGG + chr1_4:52485303-52485322 Msa0169280:CDS 35.0%
! GCAGTAAAAACCTTTCAAGT+AGG - chr1_4:52485316-52485335 None:intergenic 35.0%
CAAGAACATACAAAACCTGT+TGG - chr1_4:52485385-52485404 None:intergenic 35.0%
! CTTTTAGTGACAACAAAGGT+AGG - chr1_4:52485424-52485443 None:intergenic 35.0%
ACCTCATCAAATGAGATTTC+TGG + chr1_4:52485608-52485627 Msa0169280:CDS 35.0%
TCCAGAAATCTCATTTGATG+AGG - chr1_4:52485612-52485631 None:intergenic 35.0%
! TCAAATGAGATTTCTGGAGA+TGG + chr1_4:52485614-52485633 Msa0169280:CDS 35.0%
TTGAGATCACTGAAAACACT+GGG - chr1_4:52485722-52485741 None:intergenic 35.0%
! TTTGAGATCACTGAAAACAC+TGG - chr1_4:52485723-52485742 None:intergenic 35.0%
! AGTGTTTTCAGTGATCTCAA+AGG + chr1_4:52485722-52485741 Msa0169280:CDS 35.0%
AGATAACTCTGGATGAATCA+AGG + chr1_4:52485941-52485960 Msa0169280:CDS 35.0%
TCCGCAATGTTTCACAAATT+AGG + chr1_4:52486063-52486082 Msa0169280:CDS 35.0%
!! CTTGTTTCTGTTTCTTGCAT+TGG + chr1_4:52486106-52486125 Msa0169280:intron 35.0%
! AATTGTTGTTGTACTTCTCC+CGG + chr1_4:52486263-52486282 Msa0169280:intron 35.0%
AACTCTCCTTACTTTATGAG+AGG + chr1_4:52486399-52486418 Msa0169280:CDS 35.0%
! GAGAGGTATACTCAAAAACT+TGG + chr1_4:52486416-52486435 Msa0169280:CDS 35.0%
CTAAAGGGAAAATCTTCATC+AGG - chr1_4:52486459-52486478 None:intergenic 35.0%
! CTGATGAAGATTTTCCCTTT+AGG + chr1_4:52486457-52486476 Msa0169280:CDS 35.0%
!! AGATTTTCCCTTTAGGAAAC+AGG + chr1_4:52486464-52486483 Msa0169280:CDS 35.0%
AGTTAGACCTGTTTCCTAAA+GGG - chr1_4:52486474-52486493 None:intergenic 35.0%
TAGTTAGACCTGTTTCCTAA+AGG - chr1_4:52486475-52486494 None:intergenic 35.0%
AGTTTCGTATTTGTGTGGTT+TGG - chr1_4:52486525-52486544 None:intergenic 35.0%
GTTCATATAATTGGGACACA+TGG - chr1_4:52486593-52486612 None:intergenic 35.0%
GGCCAATATCATAATCAAGT+TGG + chr1_4:52486987-52487006 Msa0169280:intron 35.0%
!! TTGGTTTTTGTTAGAGGATC+TGG + chr1_4:52487006-52487025 Msa0169280:intron 35.0%
! TGGTTTTTGTTAGAGGATCT+GGG + chr1_4:52487007-52487026 Msa0169280:intron 35.0%
TCTTCAGCTTCCAAATTCAA+TGG - chr1_4:52487174-52487193 None:intergenic 35.0%
! GACGAAATTTTGCCTATGAT+TGG + chr1_4:52487270-52487289 Msa0169280:CDS 35.0%
TGAGTAGGAAATGAATACCA+TGG - chr1_4:52487363-52487382 None:intergenic 35.0%
AGCTGCAAAGTATAATGAGT+AGG - chr1_4:52487378-52487397 None:intergenic 35.0%
AAAGAAGAACCTGATATTCG+TGG + chr1_4:52487543-52487562 Msa0169280:CDS 35.0%
AGATGATATTGGGCAAGATA+TGG + chr1_4:52487632-52487651 Msa0169280:CDS 35.0%
AGGTTGCAACAGAAAATTTG+AGG + chr1_4:52487688-52487707 Msa0169280:CDS 35.0%
GGTTGCAACAGAAAATTTGA+GGG + chr1_4:52487689-52487708 Msa0169280:CDS 35.0%
! AACAGAAAATTTGAGGGCAT+TGG + chr1_4:52487695-52487714 Msa0169280:CDS 35.0%
CAGATCTTTCAACAAGTTCT+TGG - chr1_4:52487730-52487749 None:intergenic 35.0%
CTATAGTTGAGCCAAATGTA+TGG + chr1_4:52487817-52487836 Msa0169280:intron 35.0%
ATCATCATCAGTTTCACTCA+TGG + chr1_4:52488019-52488038 Msa0169280:intron 35.0%
AACTCCAAAGCACAAAATGT+TGG - chr1_4:52488140-52488159 None:intergenic 35.0%
TGGACAACTAATGAGCAATA+CGG - chr1_4:52488295-52488314 None:intergenic 35.0%
! TTGCTCTAGATATCTACTCA+TGG - chr1_4:52488315-52488334 None:intergenic 35.0%
CAAAATGCCAACAGAATAGA+TGG + chr1_4:52488691-52488710 Msa0169280:CDS 35.0%
ATGAATCTCAATCAGTTCTC+AGG + chr1_4:52488749-52488768 Msa0169280:CDS 35.0%
GATATATAGTTCTCCTTGCA+AGG + chr1_4:52489026-52489045 Msa0169280:intron 35.0%
GATCATTATTTGCAGGATGT+TGG + chr1_4:52489097-52489116 Msa0169280:intron 35.0%
!!! TCTGCTTACTTTTTTCTCGT+TGG + chr1_4:52489338-52489357 Msa0169280:intron 35.0%
!! TTTTGTTTCATCGAAGCTTG+AGG + chr1_4:52489386-52489405 Msa0169280:CDS 35.0%
AGTAAAGGCAATCAAGTCTA+TGG - chr1_4:52489464-52489483 None:intergenic 35.0%
CTTGGACTGTTAAGAAGTAA+AGG - chr1_4:52489533-52489552 None:intergenic 35.0%
! ATACCTTTGATTTCGAGTCT+TGG - chr1_4:52489551-52489570 None:intergenic 35.0%
! TGGATGCAATAACCCAATTT+TGG - chr1_4:52489574-52489593 None:intergenic 35.0%
! CAACAAAAGTGTGCATTAAG+GGG - chr1_4:52489604-52489623 None:intergenic 35.0%
! CACAACAAAAGTGTGCATTA+AGG - chr1_4:52489606-52489625 None:intergenic 35.0%
! CTTAATGCACACTTTTGTTG+TGG + chr1_4:52489604-52489623 Msa0169280:intron 35.0%
TGTGGTGTATCTGATATGTT+CGG + chr1_4:52489622-52489641 Msa0169280:intron 35.0%
TTTCCTCACTGAGATAATAC+TGG + chr1_4:52489755-52489774 Msa0169280:CDS 35.0%
!! GATAATACTGGCTCTTAAAG+AGG + chr1_4:52489767-52489786 Msa0169280:CDS 35.0%
CCTAAAAAATGTGTGGATAC+TGG - chr1_4:52489943-52489962 None:intergenic 35.0%
!!! CCAGTATCCACACATTTTTT+AGG + chr1_4:52489940-52489959 Msa0169280:intron 35.0%
!!! CCACACATTTTTTAGGTTTG+GGG + chr1_4:52489947-52489966 Msa0169280:intron 35.0%
!!! CACACATTTTTTAGGTTTGG+GGG + chr1_4:52489948-52489967 Msa0169280:intron 35.0%
! ATTTTCATGTTGGGAAAACG+GGG - chr1_4:52490158-52490177 None:intergenic 35.0%
GTTCATAAAAGAGACACGTA+AGG + chr1_4:52490364-52490383 Msa0169280:intron 35.0%
GTGCAGGTAATAAAGATTAG+AGG - chr1_4:52490467-52490486 None:intergenic 35.0%
!! TACGCTCATATAAGTTGGTT+GGG - chr1_4:52490824-52490843 None:intergenic 35.0%
!! TTACGCTCATATAAGTTGGT+TGG - chr1_4:52490825-52490844 None:intergenic 35.0%
! AGCTTTTGTTCACTATGTTG+GGG - chr1_4:52490871-52490890 None:intergenic 35.0%
! GAGCTTTTGTTCACTATGTT+GGG - chr1_4:52490872-52490891 None:intergenic 35.0%
TGCTTAGTCATTCACATGAT+TGG - chr1_4:52490913-52490932 None:intergenic 35.0%
!! CACTCATATAAGTTGGTTGA+GGG - chr1_4:52490951-52490970 None:intergenic 35.0%
!! ACACTCATATAAGTTGGTTG+AGG - chr1_4:52490952-52490971 None:intergenic 35.0%
CATTGCACACTCATATAAGT+TGG - chr1_4:52490958-52490977 None:intergenic 35.0%
CAACTTATATGAGTGTGCAA+TGG + chr1_4:52490956-52490975 Msa0169280:intron 35.0%
ACTCATACGACTCATAATCA+TGG + chr1_4:52491015-52491034 Msa0169280:intron 35.0%
AGTAAGTTAGAGAGCTGTTT+GGG - chr1_4:52491275-52491294 None:intergenic 35.0%
AAGTAAGTTAGAGAGCTGTT+TGG - chr1_4:52491276-52491295 None:intergenic 35.0%
AGCTCTCTAACTTACTTCTA+AGG + chr1_4:52491279-52491298 Msa0169280:intron 35.0%
GATTTCATCATAACCAGGTA+AGG - chr1_4:52491835-52491854 None:intergenic 35.0%
!! CGTACGTTTTTGGAGAAAAA+GGG - chr1_4:52491897-52491916 None:intergenic 35.0%
!! ACGTACGTTTTTGGAGAAAA+AGG - chr1_4:52491898-52491917 None:intergenic 35.0%
ACTGGTAACATCCAAAATGA+TGG + chr1_4:52492257-52492276 Msa0169280:intron 35.0%
! CTCCTTGAATACCATCATTT+TGG - chr1_4:52492271-52492290 None:intergenic 35.0%
!! TTTTAAGTAATAGGATGGGC+TGG + chr1_4:52492497-52492516 Msa0169280:intron 35.0%
TGTGGGTATAATGTTCAGAA+AGG + chr1_4:52492590-52492609 Msa0169280:intron 35.0%
TACAGGCTAATAAGAAAACC+AGG + chr1_4:52492702-52492721 Msa0169280:intron 35.0%
CTAATAAGAAAACCAGGAAC+AGG + chr1_4:52492708-52492727 Msa0169280:CDS 35.0%
! TATGTGGAGTTTTTCCAACA+AGG - chr1_4:52492944-52492963 None:intergenic 35.0%
! AGCTCAAGGAAATGTTACTT+CGG - chr1_4:52493137-52493156 None:intergenic 35.0%
GGCCAATCTTGGTTTATTAA+AGG + chr1_4:52493186-52493205 Msa0169280:intron 35.0%
! GTTTTATATGTTCTTCAGGC+AGG - chr1_4:52493492-52493511 None:intergenic 35.0%
TTGTAAAACAGATCAAGGAG+CGG + chr1_4:52493595-52493614 Msa0169280:intron 35.0%
TTTCTTCAGATTTAGCACCT+CGG - chr1_4:52493632-52493651 None:intergenic 35.0%
TTTCAAAAGCAACTACATCC+AGG + chr1_4:52493664-52493683 Msa0169280:CDS 35.0%
! GACAATGTGATGTCTTTTTC+AGG + chr1_4:52494155-52494174 Msa0169280:intron 35.0%
GATATTGCATAAATTGGCAG+TGG + chr1_4:52494441-52494460 Msa0169280:intron 35.0%
AGGACACTTTATGCTATTGT+AGG - chr1_4:52494512-52494531 None:intergenic 35.0%
! AGTTGTTACTTGTTCCATCT+AGG + chr1_4:52494554-52494573 Msa0169280:intron 35.0%
CCTAGCATCATATTCTGAAT+CGG - chr1_4:52494794-52494813 None:intergenic 35.0%
GAATATGCTAGCAAAAAAGC+TGG + chr1_4:52494916-52494935 Msa0169280:CDS 35.0%
AGCTTGAACCTTATGCATAT+TGG + chr1_4:52494962-52494981 Msa0169280:CDS 35.0%
!! CTCATCATTTTTCGATCAAG+TGG - chr1_4:52494988-52495007 None:intergenic 35.0%
ATCGAAAAATGATGAGTCGT+CGG + chr1_4:52494992-52495011 Msa0169280:CDS 35.0%
! AAAAAAAGGTATGGCTACTG+TGG + chr1_4:52495035-52495054 Msa0169280:CDS 35.0%
! GATAAAGGAAAGCAGGTTTT+TGG + chr1_4:52495212-52495231 Msa0169280:three_prime_UTR 35.0%
TGGAATTGAACAGTAAACCC+TGG - chr1_4:52484042-52484061 None:intergenic 40.0%
ATTCCATTTCCGATCATGGA+AGG + chr1_4:52484056-52484075 Msa0169280:exon 40.0%
ATTCCTTCCATGATCGGAAA+TGG - chr1_4:52484062-52484081 None:intergenic 40.0%
GATCATGGAAGGAATCGAAA+TGG + chr1_4:52484067-52484086 Msa0169280:exon 40.0%
TTAAAAGCGATTCGATGACG+TGG - chr1_4:52484313-52484332 None:intergenic 40.0%
! GACGTTGTTCAATCTTTTGC+TGG + chr1_4:52484526-52484545 Msa0169280:CDS 40.0%
! CGTTGTTCAATCTTTTGCTG+GGG + chr1_4:52484528-52484547 Msa0169280:CDS 40.0%
!! TCTTACTGATTCAAGACCGA+AGG + chr1_4:52484553-52484572 Msa0169280:CDS 40.0%
GTTGTACATTGCCTTTGGTT+TGG + chr1_4:52484827-52484846 Msa0169280:intron 40.0%
! GAGATGGAAAAGCGTGAAAA+AGG - chr1_4:52484969-52484988 None:intergenic 40.0%
CACGTTGTTCATGTAATAGC+TGG + chr1_4:52485015-52485034 Msa0169280:intron 40.0%
GTTCATGTAATAGCTGGGAT+TGG + chr1_4:52485021-52485040 Msa0169280:intron 40.0%
! TGCTGACTAGTTCTTACAAC+AGG + chr1_4:52485199-52485218 Msa0169280:intron 40.0%
GTAAGAAGGCAATCCCATTT+GGG + chr1_4:52485221-52485240 Msa0169280:CDS 40.0%
AGTTTATCAAGACATCACGG+AGG - chr1_4:52485247-52485266 None:intergenic 40.0%
! GAAAGGTTTTTACTGCTTGC+TGG + chr1_4:52485320-52485339 Msa0169280:CDS 40.0%
AAATGCTGGTGAAGGAACTA+AGG + chr1_4:52485355-52485374 Msa0169280:CDS 40.0%
AATGCTGGTGAAGGAACTAA+GGG + chr1_4:52485356-52485375 Msa0169280:CDS 40.0%
CAAAGGTAGGCATTCTTTCA+AGG - chr1_4:52485411-52485430 None:intergenic 40.0%
!! TGAGGTGTTGTGCACATTAT+CGG + chr1_4:52485577-52485596 Msa0169280:CDS 40.0%
TTTGGCATCTGAACATGAAG+AGG + chr1_4:52485837-52485856 Msa0169280:CDS 40.0%
GAGTTTGATTAAACAGGGAG+TGG + chr1_4:52485915-52485934 Msa0169280:CDS 40.0%
AACATCAAAAACTCTGTCCC+AGG - chr1_4:52486040-52486059 None:intergenic 40.0%
TGGGAATTTGAATGGTTTCC+TGG + chr1_4:52486954-52486973 Msa0169280:intron 40.0%
TGCCTATGATTGGACGTATT+AGG + chr1_4:52487280-52487299 Msa0169280:CDS 40.0%
GCCTATGATTGGACGTATTA+GGG + chr1_4:52487281-52487300 Msa0169280:CDS 40.0%
TCCCTAATACGTCCAATCAT+AGG - chr1_4:52487285-52487304 None:intergenic 40.0%
TATTAGGGAGAAGGCTCAAA+AGG + chr1_4:52487296-52487315 Msa0169280:CDS 40.0%
!! AAGCTTTTAGCTGTGTCTGA+AGG - chr1_4:52487489-52487508 None:intergenic 40.0%
AGACACAGCTAAAAGCTTCA+AGG + chr1_4:52487491-52487510 Msa0169280:CDS 40.0%
TATGGCCAAAGAACAAGTCT+TGG + chr1_4:52487650-52487669 Msa0169280:CDS 40.0%
CTTGGTTAATTACTCGCAAC+AGG + chr1_4:52487668-52487687 Msa0169280:CDS 40.0%
GGAATGCAATGCCATACATT+TGG - chr1_4:52487831-52487850 None:intergenic 40.0%
CATGCTCAATTGCAAGAACA+TGG - chr1_4:52487852-52487871 None:intergenic 40.0%
TTGCAATTGAGCATGCATGT+TGG + chr1_4:52487857-52487876 Msa0169280:intron 40.0%
ATAGTACATACGAGCACAAC+AGG - chr1_4:52487939-52487958 None:intergenic 40.0%
! GTGAAACTGATGATGATACG+TGG - chr1_4:52488016-52488035 None:intergenic 40.0%
AAGCACAAAATGTTGGCAAC+TGG - chr1_4:52488133-52488152 None:intergenic 40.0%
! GTTGCCAACATTTTGTGCTT+TGG + chr1_4:52488133-52488152 Msa0169280:intron 40.0%
TACTAGAAGCAAAGTGAGCT+TGG - chr1_4:52488194-52488213 None:intergenic 40.0%
AAGGGGATGTAGAGATTATG+TGG + chr1_4:52488250-52488269 Msa0169280:intron 40.0%
AGGGGATGTAGAGATTATGT+GGG + chr1_4:52488251-52488270 Msa0169280:intron 40.0%
GTCTGAACCATCTATTCTGT+TGG - chr1_4:52488701-52488720 None:intergenic 40.0%
AGTATTAAAGCCAGCATTGC+AGG + chr1_4:52488994-52489013 Msa0169280:CDS 40.0%
AAGTTCTCTCGATCATACTC+AGG + chr1_4:52489143-52489162 Msa0169280:CDS 40.0%
AGTTCTCTCGATCATACTCA+GGG + chr1_4:52489144-52489163 Msa0169280:CDS 40.0%
GGATTATTCTTGACAGAGCT+CGG + chr1_4:52489359-52489378 Msa0169280:intron 40.0%
AGTCCAAGACTCGAAATCAA+AGG + chr1_4:52489545-52489564 Msa0169280:CDS 40.0%
ATCTCAGTGAGGAAAACTTC+TGG - chr1_4:52489750-52489769 None:intergenic 40.0%
AGGTAATGCAGTGTTAGTTG+TGG + chr1_4:52489787-52489806 Msa0169280:intron 40.0%
AAATAAATGCTACGTGGGAG+AGG - chr1_4:52489840-52489859 None:intergenic 40.0%
!!! GTATTTCTTTTGGCTCTGCT+CGG + chr1_4:52489876-52489895 Msa0169280:intron 40.0%
CCCCAAACCTAAAAAATGTG+TGG - chr1_4:52489950-52489969 None:intergenic 40.0%
!!! ACATTTTTTAGGTTTGGGGG+TGG + chr1_4:52489951-52489970 Msa0169280:intron 40.0%
!!! CATTTTTTAGGTTTGGGGGT+GGG + chr1_4:52489952-52489971 Msa0169280:intron 40.0%
CTACAAGGAATGGACAGATT+AGG - chr1_4:52490017-52490036 None:intergenic 40.0%
CCACTACTTACTACAAGGAA+TGG - chr1_4:52490027-52490046 None:intergenic 40.0%
CCATTCCTTGTAGTAAGTAG+TGG + chr1_4:52490024-52490043 Msa0169280:intron 40.0%
TTGCACATACAATAGCACAC+TGG + chr1_4:52490054-52490073 Msa0169280:intron 40.0%
TGCACATACAATAGCACACT+GGG + chr1_4:52490055-52490074 Msa0169280:intron 40.0%
GCACACTGGGTAATTGAAAT+AGG + chr1_4:52490068-52490087 Msa0169280:intron 40.0%
ATTTAAAAGTCTTGGCACGC+AGG + chr1_4:52490316-52490335 Msa0169280:intron 40.0%
TATTACCTGCACATTACCCA+CGG + chr1_4:52490475-52490494 Msa0169280:intron 40.0%
TTGATAGAGTTGCATGGTCA+AGG - chr1_4:52490720-52490739 None:intergenic 40.0%
! GCTTTTGTTCACTATGTTGG+GGG - chr1_4:52490870-52490889 None:intergenic 40.0%
! GGAGCTTTTGTTCACTATGT+TGG - chr1_4:52490873-52490892 None:intergenic 40.0%
ACATAGTGAACAAAAGCTCC+AGG + chr1_4:52490873-52490892 Msa0169280:intron 40.0%
CATAGTGAACAAAAGCTCCA+GGG + chr1_4:52490874-52490893 Msa0169280:intron 40.0%
GTCATTCACATGATTGGTGA+GGG - chr1_4:52490907-52490926 None:intergenic 40.0%
AGTCATTCACATGATTGGTG+AGG - chr1_4:52490908-52490927 None:intergenic 40.0%
TGTGAATGACTAAGCATTCC+AGG + chr1_4:52490917-52490936 Msa0169280:intron 40.0%
GTGAATGACTAAGCATTCCA+GGG + chr1_4:52490918-52490937 Msa0169280:intron 40.0%
TAAGCTCCAGAAGTCTGTTA+TGG - chr1_4:52491243-52491262 None:intergenic 40.0%
! AAATTAGTCTCACCCTTACC+TGG + chr1_4:52491819-52491838 Msa0169280:intron 40.0%
ACTGCGATTTCATCATAACC+AGG - chr1_4:52491840-52491859 None:intergenic 40.0%
AGGGAGAAAAGTCAGAAAAG+AGG - chr1_4:52491878-52491897 None:intergenic 40.0%
ACATAACTGTTGCATGCTAC+TGG + chr1_4:52492239-52492258 Msa0169280:intron 40.0%
ATTCTGTAACGACCATCTAG+TGG + chr1_4:52492313-52492332 Msa0169280:intron 40.0%
TTCTGTAACGACCATCTAGT+GGG + chr1_4:52492314-52492333 Msa0169280:intron 40.0%
TTTACTCAGGGATATGTGCT+TGG - chr1_4:52492407-52492426 None:intergenic 40.0%
AGATGGCAAAAAGTGATGTC+TGG - chr1_4:52492634-52492653 None:intergenic 40.0%
TTAACTTCACAAGCTTCCAG+AGG + chr1_4:52492657-52492676 Msa0169280:intron 40.0%
ACTTCAAAATTCAGCACCTC+TGG - chr1_4:52492676-52492695 None:intergenic 40.0%
GTTGGTATGGTTAAGGCAAA+GGG - chr1_4:52492876-52492895 None:intergenic 40.0%
TGTTGGTATGGTTAAGGCAA+AGG - chr1_4:52492877-52492896 None:intergenic 40.0%
!!! TTGTGCTGTTTTGTGAGCTT+AGG + chr1_4:52492908-52492927 Msa0169280:intron 40.0%
ACGGTTGCACTTATCATATG+TGG - chr1_4:52492960-52492979 None:intergenic 40.0%
ATGATAAGTGCAACCGTCAA+AGG + chr1_4:52492963-52492982 Msa0169280:CDS 40.0%
AGCAAGGTCAGAGAATTCAT+AGG - chr1_4:52493003-52493022 None:intergenic 40.0%
!! TAAACCAAGATTGGCCTACA+CGG - chr1_4:52493182-52493201 None:intergenic 40.0%
CAATCCTTCTGCTTGTGATT+TGG - chr1_4:52493221-52493240 None:intergenic 40.0%
TGGTTGAGTGTTTGTTTCAG+TGG + chr1_4:52493260-52493279 Msa0169280:CDS 40.0%
!! GTTGAAGATGGCTGTTGTTT+TGG + chr1_4:52493354-52493373 Msa0169280:intron 40.0%
TCAACTAACCTTGCGTATGT+TGG - chr1_4:52493521-52493540 None:intergenic 40.0%
GTGCTAAATCTGAAGAAACC+AGG + chr1_4:52493634-52493653 Msa0169280:CDS 40.0%
!!! TGCTTTTGAAACATGAGACC+TGG - chr1_4:52493655-52493674 None:intergenic 40.0%
AGTGATGCAGAATACCTGAA+CGG + chr1_4:52494235-52494254 Msa0169280:CDS 40.0%
TTACGGAGATAACTCATCAC+AGG - chr1_4:52494489-52494508 None:intergenic 40.0%
!! AGCCACTTGATTTGCTTGAT+CGG + chr1_4:52494635-52494654 Msa0169280:CDS 40.0%
AGAATCTCAAAAGGAAGTCC+AGG + chr1_4:52494686-52494705 Msa0169280:CDS 40.0%
CTGAAGGACGTTTGATTATC+CGG + chr1_4:52494737-52494756 Msa0169280:CDS 40.0%
TGAAGGACGTTTGATTATCC+GGG + chr1_4:52494738-52494757 Msa0169280:CDS 40.0%
TTTGATTATCCGGGAGGAAA+GGG + chr1_4:52494747-52494766 Msa0169280:CDS 40.0%
CCGATTCAGAATATGATGCT+AGG + chr1_4:52494791-52494810 Msa0169280:CDS 40.0%
CTTGCAGACAAATGACTATC+AGG - chr1_4:52494823-52494842 None:intergenic 40.0%
CTGATAGTCATTTGTCTGCA+AGG + chr1_4:52494821-52494840 Msa0169280:CDS 40.0%
TATGCTAGCAAAAAAGCTGG+TGG + chr1_4:52494919-52494938 Msa0169280:CDS 40.0%
AAGCTGGTGGAGATATTAAG+AGG + chr1_4:52494932-52494951 Msa0169280:CDS 40.0%
TGGTGGAGATATTAAGAGGA+AGG + chr1_4:52494936-52494955 Msa0169280:CDS 40.0%
TCAAGTGGCCAATATGCATA+AGG - chr1_4:52494973-52494992 None:intergenic 40.0%
AATAACGCAGTCTTGAAGCT+GGG - chr1_4:52495297-52495316 None:intergenic 40.0%
AATATGCGACTGGGGAAGAA+GGG - chr1_4:52484235-52484254 None:intergenic 45.0%
AAATATGCGACTGGGGAAGA+AGG - chr1_4:52484236-52484255 None:intergenic 45.0%
TCTTCCCCAGTCGCATATTT+CGG + chr1_4:52484236-52484255 Msa0169280:CDS 45.0%
TCCTTCTTCAACACAGCTAC+GGG - chr1_4:52484365-52484384 None:intergenic 45.0%
CTCCTTCTTCAACACAGCTA+CGG - chr1_4:52484366-52484385 None:intergenic 45.0%
TTCTCCGTCGTCGAAGAATT+CGG + chr1_4:52484424-52484443 Msa0169280:CDS 45.0%
!! TCGGAGAGTATCGTTGTTGA+TGG + chr1_4:52484443-52484462 Msa0169280:CDS 45.0%
GCAGGATCAAACCAAACCAA+AGG - chr1_4:52484841-52484860 None:intergenic 45.0%
TGGAAGATTGAACACTACGC+AGG - chr1_4:52484859-52484878 None:intergenic 45.0%
TGTGAGCAAAATGACGGTAG+TGG - chr1_4:52484879-52484898 None:intergenic 45.0%
GGTAAGAAGGCAATCCCATT+TGG + chr1_4:52485220-52485239 Msa0169280:intron 45.0%
CTATTAGCATCTGCGAGTGA+AGG + chr1_4:52485281-52485300 Msa0169280:CDS 45.0%
!! AGGTTTTTACTGCTTGCTGG+TGG + chr1_4:52485323-52485342 Msa0169280:CDS 45.0%
GCAAATGCAAATGCTGGTGA+AGG + chr1_4:52485347-52485366 Msa0169280:CDS 45.0%
ATTATGCGCCTAGTGACTAG+GGG - chr1_4:52485497-52485516 None:intergenic 45.0%
CATTATGCGCCTAGTGACTA+GGG - chr1_4:52485498-52485517 None:intergenic 45.0%
!! TTCCTCTGAAGCACTACTTG+AGG + chr1_4:52485559-52485578 Msa0169280:CDS 45.0%
TGCATCTGTGACTGCGAATA+TGG - chr1_4:52485863-52485882 None:intergenic 45.0%
CTGGATGAATCAAGGAGATC+AGG + chr1_4:52485949-52485968 Msa0169280:CDS 45.0%
ATTATCACTATGCTGCTGCC+TGG + chr1_4:52486019-52486038 Msa0169280:CDS 45.0%
TTATCACTATGCTGCTGCCT+GGG + chr1_4:52486020-52486039 Msa0169280:CDS 45.0%
ATTGGGACACATGGTTGTTC+TGG - chr1_4:52486584-52486603 None:intergenic 45.0%
TTCAGGTCCCATTGCAACAA+GGG - chr1_4:52487133-52487152 None:intergenic 45.0%
! TTTCAGGTCCCATTGCAACA+AGG - chr1_4:52487134-52487153 None:intergenic 45.0%
GATTGGACGTATTAGGGAGA+AGG + chr1_4:52487287-52487306 Msa0169280:CDS 45.0%
! GGAGAAGGCTCAAAAGGTAT+TGG + chr1_4:52487302-52487321 Msa0169280:intron 45.0%
! CAGCGTTTTTCTTCTCTCCA+TGG + chr1_4:52487343-52487362 Msa0169280:intron 45.0%
TACTTTGCAGCTTGAGAAGC+AGG + chr1_4:52487386-52487405 Msa0169280:intron 45.0%
ACTTTGCAGCTTGAGAAGCA+GGG + chr1_4:52487387-52487406 Msa0169280:intron 45.0%
ACGCACTTGCTTACTCTTTG+TGG + chr1_4:52487436-52487455 Msa0169280:CDS 45.0%
!! AGATGATGGTGGTTGTTTGC+AGG + chr1_4:52487776-52487795 Msa0169280:CDS 45.0%
AAAAGCTGAAACATGGGCAC+TGG - chr1_4:52487978-52487997 None:intergenic 45.0%
TGCAGCAATCTTTCAACGTG+AGG - chr1_4:52488493-52488512 None:intergenic 45.0%
TTCGCAGTTTCATTGTTGCG+TGG + chr1_4:52488938-52488957 Msa0169280:CDS 45.0%
!! TGTTGGTGTCATGCAGAAGA+AGG + chr1_4:52489114-52489133 Msa0169280:CDS 45.0%
! TTCAATCACGGGTGTTGTCA+TGG + chr1_4:52489245-52489264 Msa0169280:intron 45.0%
TATGGCGTTTGGCAGAAGAA+TGG - chr1_4:52489446-52489465 None:intergenic 45.0%
GCAATCAAGTCTATGGCGTT+TGG - chr1_4:52489457-52489476 None:intergenic 45.0%
GAACTCAACTTTGACTGCCT+CGG - chr1_4:52489511-52489530 None:intergenic 45.0%
GTGCATTAAGGGGACAAACA+TGG - chr1_4:52489594-52489613 None:intergenic 45.0%
TGAACTTATGTACTGCCGAC+AGG + chr1_4:52489707-52489726 Msa0169280:intron 45.0%
AGGCCATTGAATCATCCTGT+CGG - chr1_4:52489725-52489744 None:intergenic 45.0%
GAGCCAGTATTATCTCAGTG+AGG - chr1_4:52489761-52489780 None:intergenic 45.0%
AGATTAGGAAGTTCCCGGTT+AGG - chr1_4:52490002-52490021 None:intergenic 45.0%
TGGACAGATTAGGAAGTTCC+CGG - chr1_4:52490007-52490026 None:intergenic 45.0%
GCTCACCACTACTTACTACA+AGG - chr1_4:52490032-52490051 None:intergenic 45.0%
ACAGGTTCAAGGAGTGAACA+TGG - chr1_4:52490097-52490116 None:intergenic 45.0%
TGTTTACACATGGCAGCAAC+AGG - chr1_4:52490115-52490134 None:intergenic 45.0%
TAGGTGCTCTGATACGTAAC+GGG - chr1_4:52490415-52490434 None:intergenic 45.0%
CTAGGTGCTCTGATACGTAA+CGG - chr1_4:52490416-52490435 None:intergenic 45.0%
! TTCATGAGTGGACTCTCAGT+TGG - chr1_4:52490442-52490461 None:intergenic 45.0%
!! AGATTAGAGGCGTTCATGAG+TGG - chr1_4:52490454-52490473 None:intergenic 45.0%
GAGGCAACATATACGCAGAA+GGG + chr1_4:52490500-52490519 Msa0169280:intron 45.0%
AGGCAACATATACGCAGAAG+GGG + chr1_4:52490501-52490520 Msa0169280:intron 45.0%
!! GTCGAGTTGATAGAGTTGCA+TGG - chr1_4:52490726-52490745 None:intergenic 45.0%
TGAGCGTAATTAGGCTCTTC+AGG + chr1_4:52490836-52490855 Msa0169280:intron 45.0%
GAGCGTAATTAGGCTCTTCA+GGG + chr1_4:52490837-52490856 Msa0169280:intron 45.0%
CACGTCGTTGTCTAAGTTGT+TGG - chr1_4:52490991-52491010 None:intergenic 45.0%
CATGAGTCGGTCTATGTTGT+TGG - chr1_4:52491056-52491075 None:intergenic 45.0%
TGTCTTGAGGTTGCATGAGT+CGG - chr1_4:52491069-52491088 None:intergenic 45.0%
! TGTCGACTGTTAGTGTCTTG+AGG - chr1_4:52491082-52491101 None:intergenic 45.0%
CAGTCACCATAACAGACTTC+TGG + chr1_4:52491234-52491253 Msa0169280:intron 45.0%
! GATCGCATCGGGACAATTTT+GGG + chr1_4:52491328-52491347 Msa0169280:intron 45.0%
ACTAACAGCTTAACTCGCAG+TGG + chr1_4:52491353-52491372 Msa0169280:intron 45.0%
TCCTACGTATTTACTCGCAG+TGG + chr1_4:52491421-52491440 Msa0169280:intron 45.0%
CAGAAAAGAGGAGAACCAGA+GGG - chr1_4:52491866-52491885 None:intergenic 45.0%
TCAGAAAAGAGGAGAACCAG+AGG - chr1_4:52491867-52491886 None:intergenic 45.0%
TGTAGAGAACACCCACTAGA+TGG - chr1_4:52492328-52492347 None:intergenic 45.0%
! TTGGAACCTCAGAAGAGTAC+AGG - chr1_4:52492362-52492381 None:intergenic 45.0%
TGCCAGAGCAAACACAACAA+TGG - chr1_4:52492523-52492542 None:intergenic 45.0%
AATGTCATAAGCCCTGTTCC+TGG - chr1_4:52492723-52492742 None:intergenic 45.0%
GAACAGGGCTTATGACATTC+TGG + chr1_4:52492724-52492743 Msa0169280:CDS 45.0%
CAAGCGAGCTAAACCTTTGA+CGG - chr1_4:52492979-52492998 None:intergenic 45.0%
TCGAGCAGGACAAATGTAGA+TGG - chr1_4:52493047-52493066 None:intergenic 45.0%
GTAGCCAAATCACAAGCAGA+AGG + chr1_4:52493214-52493233 Msa0169280:CDS 45.0%
GCTTATCACGAAGTGTGGAT+TGG + chr1_4:52493450-52493469 Msa0169280:CDS 45.0%
!! TATCACGAAGTGTGGATTGG+AGG + chr1_4:52493453-52493472 Msa0169280:CDS 45.0%
ACTTCTGACCAACATACGCA+AGG + chr1_4:52493510-52493529 Msa0169280:CDS 45.0%
GAAAGGCCACTACATGTAAG+TGG - chr1_4:52493774-52493793 None:intergenic 45.0%
GCTGTATCTTGAGCTGCATT+TGG + chr1_4:52494133-52494152 Msa0169280:intron 45.0%
GAGTTTGATGGAGACAGCAA+AGG + chr1_4:52494211-52494230 Msa0169280:CDS 45.0%
TAGAAATTGCCTTGCCGTTC+AGG - chr1_4:52494252-52494271 None:intergenic 45.0%
! AACGGCAAGGCAATTTCTAG+AGG + chr1_4:52494253-52494272 Msa0169280:CDS 45.0%
! ACGGCAAGGCAATTTCTAGA+GGG + chr1_4:52494254-52494273 Msa0169280:CDS 45.0%
!! TGCTGCTGATTTGAGATGTG+TGG - chr1_4:52494290-52494309 None:intergenic 45.0%
AATCAGCAGCATCGTCATTC+AGG + chr1_4:52494299-52494318 Msa0169280:CDS 45.0%
GAGATAACTCATCACAGGAC+CGG - chr1_4:52494484-52494503 None:intergenic 45.0%
AGTCTCATCTTGGACCTAGA+TGG - chr1_4:52494571-52494590 None:intergenic 45.0%
TGCCGATCAAGCAAATCAAG+TGG - chr1_4:52494640-52494659 None:intergenic 45.0%
TGCTTGATCGGCAGAAAGTA+AGG + chr1_4:52494647-52494666 Msa0169280:CDS 45.0%
GAGATGGAGGTAGATTCTGA+AGG + chr1_4:52494721-52494740 Msa0169280:CDS 45.0%
GTTTGATTATCCGGGAGGAA+AGG + chr1_4:52494746-52494765 Msa0169280:CDS 45.0%
GCATCATATTCTGAATCGGC+TGG - chr1_4:52494790-52494809 None:intergenic 45.0%
AGTCATTTGTCTGCAAGGTC+CGG + chr1_4:52494826-52494845 Msa0169280:CDS 45.0%
!! TGCTGTTCTTCTCCGCTTTT+GGG - chr1_4:52494860-52494879 None:intergenic 45.0%
CATAGGGCTGCTGCAAAAAA+AGG + chr1_4:52495021-52495040 Msa0169280:CDS 45.0%
GGCTGCTGCAAAAAAAGGTA+TGG + chr1_4:52495026-52495045 Msa0169280:CDS 45.0%
GTAGCAGATTGATAGAGCCA+TGG + chr1_4:52495164-52495183 Msa0169280:three_prime_UTR 45.0%
CAATAACGCAGTCTTGAAGC+TGG - chr1_4:52495298-52495317 None:intergenic 45.0%
!!! TTCAAATTATTTTAATATTT+TGG + chr1_4:52489214-52489233 Msa0169280:intron 5.0%
!! GCAGAGGTGTTGGTGGTTAA+CGG - chr1_4:52484168-52484187 None:intergenic 50.0%
TTGCGCCGAAATATGCGACT+GGG - chr1_4:52484244-52484263 None:intergenic 50.0%
GATTAGGTTCCGGTACGATG+CGG - chr1_4:52484283-52484302 None:intergenic 50.0%
!! TGGTCAGGTGGATTAGGTTC+CGG - chr1_4:52484293-52484312 None:intergenic 50.0%
! ATGACGTGGTCAGGTGGATT+AGG - chr1_4:52484299-52484318 None:intergenic 50.0%
CTCTCCGAATTCTTCGACGA+CGG - chr1_4:52484431-52484450 None:intergenic 50.0%
! TGTTGTGGACTGTTGGGGTA+AGG + chr1_4:52485110-52485129 Msa0169280:intron 50.0%
! GTTGTGGACTGTTGGGGTAA+GGG + chr1_4:52485111-52485130 Msa0169280:intron 50.0%
! TTGTGGACTGTTGGGGTAAG+GGG + chr1_4:52485112-52485131 Msa0169280:intron 50.0%
GGTGGAGCAAATGCAAATGC+TGG + chr1_4:52485341-52485360 Msa0169280:CDS 50.0%
CCATTATGCGCCTAGTGACT+AGG - chr1_4:52485499-52485518 None:intergenic 50.0%
CCTAGTCACTAGGCGCATAA+TGG + chr1_4:52485496-52485515 Msa0169280:CDS 50.0%
CACCTCAAGTAGTGCTTCAG+AGG - chr1_4:52485564-52485583 None:intergenic 50.0%
GGGAGTGGATCAGATAACTC+TGG + chr1_4:52485930-52485949 Msa0169280:CDS 50.0%
TTGCAACAAGGGCTGATCCA+AGG - chr1_4:52487122-52487141 None:intergenic 50.0%
TGGATCAGCCCTTGTTGCAA+TGG + chr1_4:52487122-52487141 Msa0169280:CDS 50.0%
GGATCAGCCCTTGTTGCAAT+GGG + chr1_4:52487123-52487142 Msa0169280:CDS 50.0%
AGGGACTGACAGTGTCATCA+AGG + chr1_4:52487406-52487425 Msa0169280:CDS 50.0%
! TTTCTTTTCATCCCAGGGCG+CGG + chr1_4:52488906-52488925 Msa0169280:intron 50.0%
AGCCAGCATTGCAGGTTTGT+TGG + chr1_4:52489002-52489021 Msa0169280:intron 50.0%
CTCCAACAAACCTGCAATGC+TGG - chr1_4:52489007-52489026 None:intergenic 50.0%
TCGAAGCTTGAGGTTCTGCT+TGG + chr1_4:52489396-52489415 Msa0169280:CDS 50.0%
CGAAGCTTGAGGTTCTGCTT+GGG + chr1_4:52489397-52489416 Msa0169280:CDS 50.0%
TGAGGTTCTGCTTGGGCTTA+TGG + chr1_4:52489404-52489423 Msa0169280:CDS 50.0%
CGTTTGGCAGAAGAATGGCA+AGG - chr1_4:52489441-52489460 None:intergenic 50.0%
ACTCCATGTCATGAAGTCCG+AGG + chr1_4:52489491-52489510 Msa0169280:CDS 50.0%
CTGCCGACAGGATGATTCAA+TGG + chr1_4:52489719-52489738 Msa0169280:intron 50.0%
GACAGGATGATTCAATGGCC+TGG + chr1_4:52489724-52489743 Msa0169280:intron 50.0%
AGTGAGGAAAACTTCTGGCC+AGG - chr1_4:52489745-52489764 None:intergenic 50.0%
!!! TGGCTCTGCTCGGTTTTTTC+TGG + chr1_4:52489886-52489905 Msa0169280:intron 50.0%
ACATGGCAGCAACAGGTTCA+AGG - chr1_4:52490108-52490127 None:intergenic 50.0%
! TCTGATACGTAACGGGATGG+GGG - chr1_4:52490408-52490427 None:intergenic 50.0%
! CTCTGATACGTAACGGGATG+GGG - chr1_4:52490409-52490428 None:intergenic 50.0%
! GCTCTGATACGTAACGGGAT+GGG - chr1_4:52490410-52490429 None:intergenic 50.0%
! TGCTCTGATACGTAACGGGA+TGG - chr1_4:52490411-52490430 None:intergenic 50.0%
! TGGACTCTCAGTTGGTGTCT+AGG - chr1_4:52490434-52490453 None:intergenic 50.0%
GTATATGTTGCCTCGACCGT+GGG - chr1_4:52490494-52490513 None:intergenic 50.0%
CGAGGCAACATATACGCAGA+AGG + chr1_4:52490499-52490518 Msa0169280:intron 50.0%
GGGAGCTTGATGCTCTGTAT+TGG - chr1_4:52490804-52490823 None:intergenic 50.0%
CTCAAGACTACACGTGCGAA+AGG + chr1_4:52491306-52491325 Msa0169280:intron 50.0%
! GGATCGCATCGGGACAATTT+TGG + chr1_4:52491327-52491346 Msa0169280:intron 50.0%
GCGAGCAAAGTGTGCATTCT+GGG + chr1_4:52491397-52491416 Msa0169280:intron 50.0%
GCCACTGCGAGTAAATACGT+AGG - chr1_4:52491425-52491444 None:intergenic 50.0%
GCGAGCGATGAATGTCAGTA+CGG + chr1_4:52491561-52491580 Msa0169280:intron 50.0%
TGAAATCGCAGTTCTCCCTC+TGG + chr1_4:52491848-52491867 Msa0169280:intron 50.0%
TGCTGACCTGTACTCTTCTG+AGG + chr1_4:52492353-52492372 Msa0169280:intron 50.0%
GGCCATTGTTGTGTTTGCTC+TGG + chr1_4:52492518-52492537 Msa0169280:intron 50.0%
CTCCTCGTCTCCAAATGCAT+GGG - chr1_4:52492759-52492778 None:intergenic 50.0%
TCTCCTCGTCTCCAAATGCA+TGG - chr1_4:52492760-52492779 None:intergenic 50.0%
GCATTTGGAGACGAGGAGAA+AGG + chr1_4:52492761-52492780 Msa0169280:CDS 50.0%
TTTGGAGACGAGGAGAAAGG+TGG + chr1_4:52492764-52492783 Msa0169280:CDS 50.0%
TTGGAGACGAGGAGAAAGGT+GGG + chr1_4:52492765-52492784 Msa0169280:CDS 50.0%
! TTGTGAGCTTAGGTTGCTCG+CGG + chr1_4:52492918-52492937 Msa0169280:intron 50.0%
! CGTCAAAGGTTTAGCTCGCT+TGG + chr1_4:52492977-52492996 Msa0169280:CDS 50.0%
TTCTCCGTGTAGGCCAATCT+TGG + chr1_4:52493175-52493194 Msa0169280:intron 50.0%
GCAAATGCATCTGAAGAGCG+TGG + chr1_4:52493240-52493259 Msa0169280:CDS 50.0%
GGGATGCTTATCACGAAGTG+TGG + chr1_4:52493445-52493464 Msa0169280:CDS 50.0%
AGATCAAGGAGCGGAAAGAG+AGG + chr1_4:52493604-52493623 Msa0169280:intron 50.0%
TGCAGAATACCTGAACGGCA+AGG + chr1_4:52494240-52494259 Msa0169280:CDS 50.0%
! CGGCAAGGCAATTTCTAGAG+GGG + chr1_4:52494255-52494274 Msa0169280:CDS 50.0%
! GGCAAGGCAATTTCTAGAGG+GGG + chr1_4:52494256-52494275 Msa0169280:CDS 50.0%
GATTCGTCAGACAAGTGCTC+AGG - chr1_4:52494607-52494626 None:intergenic 50.0%
CATCTCATCATCGTCTGACC+TGG - chr1_4:52494707-52494726 None:intergenic 50.0%
CAGGTCAGACGATGATGAGA+TGG + chr1_4:52494705-52494724 Msa0169280:CDS 50.0%
GTCAGACGATGATGAGATGG+AGG + chr1_4:52494708-52494727 Msa0169280:CDS 50.0%
AGGACGTTTGATTATCCGGG+AGG + chr1_4:52494741-52494760 Msa0169280:CDS 50.0%
!! CCGCTTTTGGGCTTTAGTTC+CGG - chr1_4:52494848-52494867 None:intergenic 50.0%
CCGGAACTAAAGCCCAAAAG+CGG + chr1_4:52494845-52494864 Msa0169280:CDS 50.0%
! CTGCTGTTCTTCTCCGCTTT+TGG - chr1_4:52494861-52494880 None:intergenic 50.0%
AAGAACAGCAGAGCCTGGTA+GGG + chr1_4:52494870-52494889 Msa0169280:CDS 50.0%
TGGTAGGGCTTACACTGGAA+AGG + chr1_4:52494894-52494913 Msa0169280:CDS 50.0%
TTTGCAGCAGCCCTATGTTG+TGG - chr1_4:52495018-52495037 None:intergenic 50.0%
! CTTCATAGAAAGCACGCCAG+AGG - chr1_4:52495094-52495113 None:intergenic 50.0%
TCTATAAACCCTTGCCGCCG+TGG + chr1_4:52483999-52484018 Msa0169280:five_prime_UTR 55.0%
CTATAAACCCTTGCCGCCGT+GGG + chr1_4:52484000-52484019 Msa0169280:five_prime_UTR 55.0%
!! CTAGCTAGCTCTAGCTCCCA+CGG - chr1_4:52484019-52484038 None:intergenic 55.0%
GAGCTAGAGCTAGCTAGCCA+GGG + chr1_4:52484022-52484041 Msa0169280:five_prime_UTR 55.0%
!! GAGGTGTTGGTGGTTAACGG+CGG - chr1_4:52484165-52484184 None:intergenic 55.0%
CAACACCTCTGCACCGTCAT+CGG + chr1_4:52484176-52484195 Msa0169280:CDS 55.0%
! CTGTGACATTGCGCCGATGA+CGG - chr1_4:52484192-52484211 None:intergenic 55.0%
TGCGCCGAAATATGCGACTG+GGG - chr1_4:52484243-52484262 None:intergenic 55.0%
GTTGCGCCGAAATATGCGAC+TGG - chr1_4:52484245-52484264 None:intergenic 55.0%
CTCCTTGAACCGCATCGTAC+CGG + chr1_4:52484271-52484290 Msa0169280:CDS 55.0%
TTCCGGTACGATGCGGTTCA+AGG - chr1_4:52484276-52484295 None:intergenic 55.0%
GATTCGATGACGTGGTCAGG+TGG - chr1_4:52484305-52484324 None:intergenic 55.0%
AGCGATTCGATGACGTGGTC+AGG - chr1_4:52484308-52484327 None:intergenic 55.0%
GCCCGTAGCTGTGTTGAAGA+AGG + chr1_4:52484361-52484380 Msa0169280:CDS 55.0%
TGGGGTAAGGGGATGTAGCA+TGG + chr1_4:52485123-52485142 Msa0169280:intron 55.0%
GACATCACGGAGGCCCAAAT+GGG - chr1_4:52485237-52485256 None:intergenic 55.0%
AGACATCACGGAGGCCCAAA+TGG - chr1_4:52485238-52485257 None:intergenic 55.0%
AGGAACTAAGGGAGCCCAAC+AGG + chr1_4:52485367-52485386 Msa0169280:CDS 55.0%
TGCGTCAACCCCTAGTCACT+AGG + chr1_4:52485486-52485505 Msa0169280:CDS 55.0%
ACTGCTCGCTTGCTTGATGC+TGG + chr1_4:52485647-52485666 Msa0169280:CDS 55.0%
GTGCAGCTTCATACGTGCCT+TGG + chr1_4:52487102-52487121 Msa0169280:intron 55.0%
AAATCAAGAAGCCGCGCCCT+GGG - chr1_4:52488920-52488939 None:intergenic 55.0%
CTGCCTCGGACTTCATGACA+TGG - chr1_4:52489497-52489516 None:intergenic 55.0%
CGAGCCTTCATGAGCCTAAC+CGG + chr1_4:52489985-52490004 Msa0169280:intron 55.0%
GAGCCTTCATGAGCCTAACC+GGG + chr1_4:52489986-52490005 Msa0169280:intron 55.0%
GTTCCCGGTTAGGCTCATGA+AGG - chr1_4:52489992-52490011 None:intergenic 55.0%
CGTATATGTTGCCTCGACCG+TGG - chr1_4:52490495-52490514 None:intergenic 55.0%
CACGTGCGAAAGGATCGCAT+CGG + chr1_4:52491316-52491335 Msa0169280:intron 55.0%
ACGTGCGAAAGGATCGCATC+GGG + chr1_4:52491317-52491336 Msa0169280:intron 55.0%
GCGAGTAACTTCACTCGCAC+TGG + chr1_4:52491375-52491394 Msa0169280:intron 55.0%
GGCGAGCAAAGTGTGCATTC+TGG + chr1_4:52491396-52491415 Msa0169280:intron 55.0%
TTGCTCGCAGTTGCGAGTTC+TGG + chr1_4:52491500-52491519 Msa0169280:intron 55.0%
TGCTCGCAGTTGCGAGTTCT+GGG + chr1_4:52491501-52491520 Msa0169280:intron 55.0%
ATGCGAGTGTTCTTGCTCGC+AGG + chr1_4:52491537-52491556 Msa0169280:intron 55.0%
GTCGAAGTCGCCCATGCATT+TGG + chr1_4:52492746-52492765 Msa0169280:CDS 55.0%
GAAGAACAGCAGAGCCTGGT+AGG + chr1_4:52494869-52494888 Msa0169280:CDS 55.0%
TGAGTCGTCGGCCACAACAT+AGG + chr1_4:52495004-52495023 Msa0169280:CDS 55.0%
GAGTCGTCGGCCACAACATA+GGG + chr1_4:52495005-52495024 Msa0169280:CDS 55.0%
!! CTTGAAGGCAAGAGTGCCTC+TGG + chr1_4:52495075-52495094 Msa0169280:CDS 55.0%
GGAGCTAGAGCTAGCTAGCC+AGG + chr1_4:52484021-52484040 Msa0169280:five_prime_UTR 60.0%
!! GTGTTGGTGGTTAACGGCGG+TGG - chr1_4:52484162-52484181 None:intergenic 60.0%
!! TGACGGTGCAGAGGTGTTGG+TGG - chr1_4:52484175-52484194 None:intergenic 60.0%
! CGATGACGGTGCAGAGGTGT+TGG - chr1_4:52484178-52484197 None:intergenic 60.0%
CGTCATCGGCGCAATGTCAC+AGG + chr1_4:52484190-52484209 Msa0169280:CDS 60.0%
CTGGGGAAGAAGGGAGGTTG+TGG - chr1_4:52484226-52484245 None:intergenic 60.0%
ATGCGACTGGGGAAGAAGGG+AGG - chr1_4:52484232-52484251 None:intergenic 60.0%
CGGTACGATGCGGTTCAAGG+AGG - chr1_4:52484273-52484292 None:intergenic 60.0%
GAAATCAAGAAGCCGCGCCC+TGG - chr1_4:52488921-52488940 None:intergenic 60.0%
! TAGGTTTGGGGGTGGGCTCT+AGG + chr1_4:52489959-52489978 Msa0169280:intron 60.0%
CTCGACCGTGGGTAATGTGC+AGG - chr1_4:52490483-52490502 None:intergenic 60.0%
CTGCACATTACCCACGGTCG+AGG + chr1_4:52490481-52490500 Msa0169280:intron 60.0%
TTGGTGAGGGCTTGATGCCC+TGG - chr1_4:52490894-52490913 None:intergenic 60.0%
TGGTTGAGGGCTTGATGCCC+TGG - chr1_4:52490938-52490957 None:intergenic 60.0%
CGCCCATGCATTTGGAGACG+AGG + chr1_4:52492754-52492773 Msa0169280:CDS 60.0%
! TAGGTTGCTCGCGGCCTTGT+TGG + chr1_4:52492927-52492946 Msa0169280:intron 60.0%
GAGCGGAAAGAGAGGAACCG+AGG + chr1_4:52493612-52493631 Msa0169280:CDS 60.0%
CCGTCTGTTCCCTTTCCTCC+CGG - chr1_4:52494759-52494778 None:intergenic 60.0%
CCGGGAGGAAAGGGAACAGA+CGG + chr1_4:52494756-52494775 Msa0169280:CDS 60.0%
GGAGGAAAGGGAACAGACGG+AGG + chr1_4:52494759-52494778 Msa0169280:CDS 60.0%
CGGAGAAGAACAGCAGAGCC+TGG + chr1_4:52494865-52494884 Msa0169280:CDS 60.0%
! AGAGCCTGGTAGGGCTGGTA+GGG + chr1_4:52494879-52494898 Msa0169280:CDS 60.0%
TAAGCCCTACCAGCCCTACC+AGG - chr1_4:52494886-52494905 None:intergenic 60.0%
! AGGGCTGGTAGGGCTTACAC+TGG + chr1_4:52494889-52494908 Msa0169280:CDS 60.0%
! TCTAGCTCCCACGGCGGCAA+GGG - chr1_4:52484010-52484029 None:intergenic 65.0%
!! GCTAGCTCTAGCTCCCACGG+CGG - chr1_4:52484016-52484035 None:intergenic 65.0%
! TTGCGCCGATGACGGTGCAG+AGG - chr1_4:52484184-52484203 None:intergenic 65.0%
GCTCGCAGTTGCGAGCTCAC+AGG + chr1_4:52491455-52491474 Msa0169280:intron 65.0%
ACAGCAGAGCCTGGTAGGGC+TGG + chr1_4:52494874-52494893 Msa0169280:CDS 65.0%
! CAGAGCCTGGTAGGGCTGGT+AGG + chr1_4:52494878-52494897 Msa0169280:CDS 65.0%
! CTCTAGCTCCCACGGCGGCA+AGG - chr1_4:52484011-52484030 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 52483965 52495375 52483965 ID=Msa0169280;Name=Msa0169280
chr1_4 mRNA 52483965 52495375 52483965 ID=Msa0169280-mRNA-1;Parent=Msa0169280;Name=Msa0169280-mRNA-1;_AED=0.08;_eAED=0.08;_QI=106|1|1|1|1|1|18|217|1288
chr1_4 exon 52483965 52484574 52483965 ID=Msa0169280-mRNA-1:exon:15569;Parent=Msa0169280-mRNA-1
chr1_4 exon 52485221 52485743 52485221 ID=Msa0169280-mRNA-1:exon:15570;Parent=Msa0169280-mRNA-1
chr1_4 exon 52485833 52486084 52485833 ID=Msa0169280-mRNA-1:exon:15571;Parent=Msa0169280-mRNA-1
chr1_4 exon 52486394 52486485 52486394 ID=Msa0169280-mRNA-1:exon:15572;Parent=Msa0169280-mRNA-1
chr1_4 exon 52487108 52487317 52487108 ID=Msa0169280-mRNA-1:exon:15573;Parent=Msa0169280-mRNA-1
chr1_4 exon 52487396 52487797 52487396 ID=Msa0169280-mRNA-1:exon:15574;Parent=Msa0169280-mRNA-1
chr1_4 exon 52488601 52488770 52488601 ID=Msa0169280-mRNA-1:exon:15575;Parent=Msa0169280-mRNA-1
chr1_4 exon 52488922 52489015 52488922 ID=Msa0169280-mRNA-1:exon:15576;Parent=Msa0169280-mRNA-1
chr1_4 exon 52489112 52489165 52489112 ID=Msa0169280-mRNA-1:exon:15577;Parent=Msa0169280-mRNA-1
chr1_4 exon 52489375 52489566 52489375 ID=Msa0169280-mRNA-1:exon:15578;Parent=Msa0169280-mRNA-1
chr1_4 exon 52489729 52489788 52489729 ID=Msa0169280-mRNA-1:exon:15579;Parent=Msa0169280-mRNA-1
chr1_4 exon 52492707 52492820 52492707 ID=Msa0169280-mRNA-1:exon:15580;Parent=Msa0169280-mRNA-1
chr1_4 exon 52492930 52493091 52492930 ID=Msa0169280-mRNA-1:exon:15581;Parent=Msa0169280-mRNA-1
chr1_4 exon 52493187 52493315 52493187 ID=Msa0169280-mRNA-1:exon:15582;Parent=Msa0169280-mRNA-1
chr1_4 exon 52493430 52493531 52493430 ID=Msa0169280-mRNA-1:exon:15583;Parent=Msa0169280-mRNA-1
chr1_4 exon 52493606 52493685 52493606 ID=Msa0169280-mRNA-1:exon:15584;Parent=Msa0169280-mRNA-1
chr1_4 exon 52494177 52494320 52494177 ID=Msa0169280-mRNA-1:exon:15585;Parent=Msa0169280-mRNA-1
chr1_4 exon 52494576 52495375 52494576 ID=Msa0169280-mRNA-1:exon:15586;Parent=Msa0169280-mRNA-1
chr1_4 five_prime_UTR 52483965 52484070 52483965 ID=Msa0169280-mRNA-1:five_prime_utr;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52484071 52484574 52484071 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52485221 52485743 52485221 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52485833 52486084 52485833 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52486394 52486485 52486394 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52487108 52487317 52487108 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52487396 52487797 52487396 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52488601 52488770 52488601 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52488922 52489015 52488922 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52489112 52489165 52489112 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52489375 52489566 52489375 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52489729 52489788 52489729 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52492707 52492820 52492707 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52492930 52493091 52492930 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52493187 52493315 52493187 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52493430 52493531 52493430 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52493606 52493685 52493606 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52494177 52494320 52494177 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 CDS 52494576 52495158 52494576 ID=Msa0169280-mRNA-1:cds;Parent=Msa0169280-mRNA-1
chr1_4 three_prime_UTR 52495159 52495375 52495159 ID=Msa0169280-mRNA-1:three_prime_utr;Parent=Msa0169280-mRNA-1
Gene Sequence

>Msa0169280

ATGGAAGGAATCGAAATGGAGCAACCAACATTCAACAACGAATCCAACGATGACATATGCAATTCAATTCTCTCTCGTTTTTCAAAATCCACCGCCGTTAACCACCAACACCTCTGCACCGTCATCGGCGCAATGTCACAGGAACTCAAAGACCACAACCTCCCTTCTTCCCCAGTCGCATATTTCGGCGCAACGTGCTCCTCCTTGAACCGCATCGTACCGGAACCTAATCCACCTGACCACGTCATCGAATCGCTTTTAACGATTCTCTCGATTGTTATCGTTAAAGTGCCCGTAGCTGTGTTGAAGAAGGAGAGAGAGTCTTTGTCTGAGCTTATTGTGAAACTTATTCATTCTCCGTCGTCGAAGAATTCGGAGAGTATCGTTGTTGATGGATTGAAGTGTGTTTCGCATTTGTTGATTCATAGGGATAGTGTTCATTGGTCTGATGTGTCGACGTTGTTCAATCTTTTGCTGGGGTTTCTTACTGATTCAAGACCGAAGGTAAGAAGGCAATCCCATTTGGGCCTCCGTGATGTCTTGATAAACTTTCAAAAGTCTTCACTATTAGCATCTGCGAGTGAAGGTGTCAAAAACCTACTTGAAAGGTTTTTACTGCTTGCTGGTGGAGCAAATGCAAATGCTGGTGAAGGAACTAAGGGAGCCCAACAGGTTTTGTATGTTCTTGATGCCTTGAAAGAATGCCTACCTTTGTTGTCACTAAAAGACAAGAACAGCATTCTCAAGCACTTCAAAACTCTATTGAATCTGCGTCAACCCCTAGTCACTAGGCGCATAATGGATGCTTTGAATTTTATCTGTCTTAACTCAACATCAGAAGTTTCCTCTGAAGCACTACTTGAGGTGTTGTGCACATTATCGGCTCTTTCTACCTCATCAAATGAGATTTCTGGAGATGGCATGACATTTACTGCTCGCTTGCTTGATGCTGGAATGAAGAAAGTTTTTTCTCTGAACAGGCAAATGTGTGTAATTAAGCTTCCCAGTGTTTTCAGTGATCTCAAAGATATTTTGGCATCTGAACATGAAGAGGCCATATTCGCAGTCACAGATGCACTCAAAAGCATGATCAATTATTGCATTGATGAGAGTTTGATTAAACAGGGAGTGGATCAGATAACTCTGGATGAATCAAGGAGATCAGGACCAACCATTATTGAGAAAATTTGTGCAACTGTTGAGAGCTTACTTGATTATCACTATGCTGCTGCCTGGGACAGAGTTTTTGATGTTGTTTCCGCAATGTTTCACAAATTAGGAAGTAACTCTCCTTACTTTATGAGAGGTATACTCAAAAACTTGGAAGATATGCAGAAGCTGCCTGATGAAGATTTTCCCTTTAGGAAACAGCTTCATACGTGCCTTGGATCAGCCCTTGTTGCAATGGGACCTGAAACTTTCTTATCCTTTATACCATTGAATTTGGAAGCTGAAGATTTATCTGTGTCAAATATATGGCTTTTTCCCATTTTAAAACAGCATATTGTTGGTGCACATCTAAAATATTTTACCGACGAAATTTTGCCTATGATTGGACGTATTAGGGAGAAGGCTCAAAAGCTTGAGAAGCAGGGACTGACAGTGTCATCAAGGAATGCAGACGCACTTGCTTACTCTTTGTGGTCTTTACTGCCTTCATTTTGTAACTATCCTTCAGACACAGCTAAAAGCTTCAAGGATCTAGAGAGACATTTACGTAGTACACTAAAAGAAGAACCTGATATTCGTGGAATAATATGCACTAGCTTGCAGCTTCTGATTAGACAAAACAAGAACATAAAGGACTCAAATGATAAAGATGATATTGGGCAAGATATGGCCAAAGAACAAGTCTTGGTTAATTACTCGCAACAGGTTGCAACAGAAAATTTGAGGGCATTGGAGATATCTGCCAAGAACTTGTTGAAAGATCTGTCAGACGTGTTCCTGAAATCTACAAAAGATGATGGTGGTTGTTTGCAGGGCACAATTAGTGACATTGCTTCTATAGCAGAAAAGAAAGTCGTACAAAACTTATTTAAGAAGAAGATGTCAGACCTCTTAAAATGTACTCAAAATGCCAACAGAATAGATGGTTCAGACAGCTCTATGCAGATTGATGCATCAAATGATGAATCTCAATCAGTTCTCAGGGCGCGGCTTCTTGATTTCGCAGTTTCATTGTTGCGTGGATTAGATACAAAAGATATTGATTTATTATTTCAAGTATTAAAGCCAGCATTGCAGGATGTTGGTGTCATGCAGAAGAAGGCATACAAAGTTCTCTCGATCATACTCAGGAGCTCGGATAGTTTTGTTTCATCGAAGCTTGAGGTTCTGCTTGGGCTTATGGTTGAAATTCTTCCTTGCCATTCTTCTGCCAAACGCCATAGACTTGATTGCCTTTACTTTTTGATACTCCATGTCATGAAGTCCGAGGCAGTCAAAGTTGAGTTCCTTTACTTCTTAACAGTCCAAGACTCGAAATCAAAGGATGATTCAATGGCCTGGCCAGAAGTTTTCCTCACTGAGATAATACTGGCTCTTAAAGAGGCTAATAAGAAAACCAGGAACAGGGCTTATGACATTCTGGTCGAAGTCGCCCATGCATTTGGAGACGAGGAGAAAGGTGGGAACAGAAATAACCTCTATCAATTTTTTATCAAGGTTGCTCGCGGCCTTGTTGGAAAAACTCCACATATGATAAGTGCAACCGTCAAAGGTTTAGCTCGCTTGGCCTATGAATTCTCTGACCTTGCTTTAACTGCTTTTGATTTGCTTCCATCTACATTTGTCCTGCTCGAAAAAAAGAATAAAGAGATAACCAAGGCCAATCTTGGTTTATTAAAGGTTTTAGTAGCCAAATCACAAGCAGAAGGATTGCAAATGCATCTGAAGAGCGTGGTTGAGTGTTTGTTTCAGTGGCAAGATGAAGCCAAAAATCATTTTAAAGCAAAGGTCAAACTTCTTTTAGGGATGCTTATCACGAAGTGTGGATTGGAGGCTGTTAAAGCTGTCCTGCCTGAAGAACATATAAAACTTCTGACCAACATACGCAAGATCAAGGAGCGGAAAGAGAGGAACCGAGGTGCTAAATCTGAAGAAACCAGGTCTCATGTTTCAAAAGCAACTACATCCAGGAAAAGTAGATGGAACCATACTGATATTTTTTCGGAGTTTGATGGAGACAGCAAAGGTAGTGATGCAGAATACCTGAACGGCAAGGCAATTTCTAGAGGGGGTAAATCTTCCACACATCTCAAATCAGCAGCATCGTCATTCAGGTCCAAGATGAGACTAAAAAACAATATTCCTGAGCACTTGTCTGACGAATCAGATGACGAGCCACTTGATTTGCTTGATCGGCAGAAAGTAAGGTCTGCTCTTAGATCTGAGAATCTCAAAAGGAAGTCCAGGTCAGACGATGATGAGATGGAGGTAGATTCTGAAGGACGTTTGATTATCCGGGAGGAAAGGGAACAGACGGAGGAAAAACCAGCCGATTCAGAATATGATGCTAGGAGTGAGCCTGATAGTCATTTGTCTGCAAGGTCCGGAACTAAAGCCCAAAAGCGGAGAAGAACAGCAGAGCCTGGTAGGGCTGGTAGGGCTTACACTGGAAAGGAATATGCTAGCAAAAAAGCTGGTGGAGATATTAAGAGGAAGGATAAGCTTGAACCTTATGCATATTGGCCACTTGATCGAAAAATGATGAGTCGTCGGCCACAACATAGGGCTGCTGCAAAAAAAGGTATGGCTACTGTGGTAAATATGACAAAAAGGCTTGAAGGCAAGAGTGCCTCTGGCGTGCTTTCTATGAAGAGTATGAAACTAAAAAGAACTCAAAAGAAAGGTAGCAAGCAATAG
Protein sequence

>Msa0169280

MEGIEMEQPTFNNESNDDICNSILSRFSKSTAVNHQHLCTVIGAMSQELKDHNLPSSPVAYFGATCSSLNRIVPEPNPPDHVIESLLTILSIVIVKVPVAVLKKERESLSELIVKLIHSPSSKNSESIVVDGLKCVSHLLIHRDSVHWSDVSTLFNLLLGFLTDSRPKVRRQSHLGLRDVLINFQKSSLLASASEGVKNLLERFLLLAGGANANAGEGTKGAQQVLYVLDALKECLPLLSLKDKNSILKHFKTLLNLRQPLVTRRIMDALNFICLNSTSEVSSEALLEVLCTLSALSTSSNEISGDGMTFTARLLDAGMKKVFSLNRQMCVIKLPSVFSDLKDILASEHEEAIFAVTDALKSMINYCIDESLIKQGVDQITLDESRRSGPTIIEKICATVESLLDYHYAAAWDRVFDVVSAMFHKLGSNSPYFMRGILKNLEDMQKLPDEDFPFRKQLHTCLGSALVAMGPETFLSFIPLNLEAEDLSVSNIWLFPILKQHIVGAHLKYFTDEILPMIGRIREKAQKLEKQGLTVSSRNADALAYSLWSLLPSFCNYPSDTAKSFKDLERHLRSTLKEEPDIRGIICTSLQLLIRQNKNIKDSNDKDDIGQDMAKEQVLVNYSQQVATENLRALEISAKNLLKDLSDVFLKSTKDDGGCLQGTISDIASIAEKKVVQNLFKKKMSDLLKCTQNANRIDGSDSSMQIDASNDESQSVLRARLLDFAVSLLRGLDTKDIDLLFQVLKPALQDVGVMQKKAYKVLSIILRSSDSFVSSKLEVLLGLMVEILPCHSSAKRHRLDCLYFLILHVMKSEAVKVEFLYFLTVQDSKSKDDSMAWPEVFLTEIILALKEANKKTRNRAYDILVEVAHAFGDEEKGGNRNNLYQFFIKVARGLVGKTPHMISATVKGLARLAYEFSDLALTAFDLLPSTFVLLEKKNKEITKANLGLLKVLVAKSQAEGLQMHLKSVVECLFQWQDEAKNHFKAKVKLLLGMLITKCGLEAVKAVLPEEHIKLLTNIRKIKERKERNRGAKSEETRSHVSKATTSRKSRWNHTDIFSEFDGDSKGSDAEYLNGKAISRGGKSSTHLKSAASSFRSKMRLKNNIPEHLSDESDDEPLDLLDRQKVRSALRSENLKRKSRSDDDEMEVDSEGRLIIREEREQTEEKPADSEYDARSEPDSHLSARSGTKAQKRRRTAEPGRAGRAYTGKEYASKKAGGDIKRKDKLEPYAYWPLDRKMMSRRPQHRAAAKKGMATVVNMTKRLEGKSASGVLSMKSMKLKRTQKKGSKQ*