Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006810 | XP_003621176.1 | 96.767 | 433 | 13 | 1 | 1 | 432 | 1 | 433 | 0.0 | 857 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006810 | sp|Q9LH89|Y3885_ARATH | 52.620 | 458 | 159 | 16 | 1 | 431 | 1 | 427 | 1.58e-124 | 370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006810 | Q2HVR5 | 96.767 | 433 | 13 | 1 | 1 | 432 | 1 | 433 | 0.0 | 857 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa1006810 | 0.802227 | 6.201323e-49 | -8.615850e-47 |
| Msa0002710 | Msa1006810 | 0.807110 | 5.931179e-50 | -8.615850e-47 |
| Msa0007990 | Msa1006810 | 0.812785 | 3.559225e-51 | -8.615850e-47 |
| Msa0030160 | Msa1006810 | 0.848012 | 8.037582e-60 | -8.615850e-47 |
| Msa0035120 | Msa1006810 | 0.838796 | 2.324331e-57 | -8.615850e-47 |
| Msa0035130 | Msa1006810 | 0.813142 | 2.973160e-51 | -8.615850e-47 |
| Msa0056450 | Msa1006810 | 0.814157 | 1.777693e-51 | -8.615850e-47 |
| Msa0079110 | Msa1006810 | 0.814237 | 1.706946e-51 | -8.615850e-47 |
| Msa0090570 | Msa1006810 | 0.815592 | 8.540993e-52 | -8.615850e-47 |
| Msa0092410 | Msa1006810 | 0.825079 | 5.700387e-54 | -8.615850e-47 |
| Msa0103250 | Msa1006810 | 0.829350 | 5.408161e-55 | -8.615850e-47 |
| Msa0104720 | Msa1006810 | 0.812929 | 3.309657e-51 | -8.615850e-47 |
| Msa0106620 | Msa1006810 | 0.854111 | 1.529593e-61 | -8.615850e-47 |
| Msa0106710 | Msa1006810 | 0.866677 | 2.393612e-65 | -8.615850e-47 |
| Msa0108390 | Msa1006810 | 0.804292 | 2.316967e-49 | -8.615850e-47 |
| Msa0108410 | Msa1006810 | 0.819149 | 1.351324e-52 | -8.615850e-47 |
| Msa0112270 | Msa1006810 | 0.804015 | 2.646175e-49 | -8.615850e-47 |
| Msa0613340 | Msa1006810 | 0.834398 | 3.067897e-56 | -8.615850e-47 |
| Msa0618470 | Msa1006810 | 0.844397 | 7.752260e-59 | -8.615850e-47 |
| Msa0624940 | Msa1006810 | 0.813009 | 3.178894e-51 | -8.615850e-47 |
| Msa0658590 | Msa1006810 | 0.800399 | 1.467745e-48 | -8.615850e-47 |
| Msa0661320 | Msa1006810 | 0.824708 | 6.972708e-54 | -8.615850e-47 |
| Msa0662940 | Msa1006810 | 0.800285 | 1.548349e-48 | -8.615850e-47 |
| Msa0663270 | Msa1006810 | 0.815001 | 1.156069e-51 | -8.615850e-47 |
| Msa0664090 | Msa1006810 | 0.808133 | 3.597913e-50 | -8.615850e-47 |
| Msa0664540 | Msa1006810 | 0.822129 | 2.794753e-53 | -8.615850e-47 |
| Msa0698100 | Msa1006810 | 0.809384 | 1.943294e-50 | -8.615850e-47 |
| Msa0698290 | Msa1006810 | 0.808128 | 3.606674e-50 | -8.615850e-47 |
| Msa0702720 | Msa1006810 | 0.834991 | 2.175747e-56 | -8.615850e-47 |
| Msa0708310 | Msa1006810 | 0.830399 | 3.001880e-55 | -8.615850e-47 |
| Msa0711150 | Msa1006810 | 0.828696 | 7.786205e-55 | -8.615850e-47 |
| Msa0727640 | Msa1006810 | 0.803172 | 3.957553e-49 | -8.615850e-47 |
| Msa0733010 | Msa1006810 | 0.817624 | 2.994069e-52 | -8.615850e-47 |
| Msa0751260 | Msa1006810 | 0.810887 | 9.219527e-51 | -8.615850e-47 |
| Msa0756380 | Msa1006810 | 0.814294 | 1.658124e-51 | -8.615850e-47 |
| Msa0779260 | Msa1006810 | 0.802121 | 6.518420e-49 | -8.615850e-47 |
| Msa0795070 | Msa1006810 | 0.817390 | 3.380369e-52 | -8.615850e-47 |
| Msa0797250 | Msa1006810 | 0.818489 | 1.908929e-52 | -8.615850e-47 |
| Msa0814600 | Msa1006810 | 0.816505 | 5.342170e-52 | -8.615850e-47 |
| Msa0817460 | Msa1006810 | 0.800872 | 1.175522e-48 | -8.615850e-47 |
| Msa0822500 | Msa1006810 | 0.814148 | 1.785155e-51 | -8.615850e-47 |
| Msa0826150 | Msa1006810 | 0.803155 | 3.988901e-49 | -8.615850e-47 |
| Msa0828240 | Msa1006810 | 0.815901 | 7.289484e-52 | -8.615850e-47 |
| Msa0830230 | Msa1006810 | 0.802454 | 5.568326e-49 | -8.615850e-47 |
| Msa0832340 | Msa1006810 | 0.812245 | 4.670629e-51 | -8.615850e-47 |
| Msa0833530 | Msa1006810 | 0.822872 | 1.877302e-53 | -8.615850e-47 |
| Msa0125650 | Msa1006810 | 0.803276 | 3.765296e-49 | -8.615850e-47 |
| Msa0127800 | Msa1006810 | 0.804755 | 1.855089e-49 | -8.615850e-47 |
| Msa0140500 | Msa1006810 | -0.807893 | 4.045978e-50 | -8.615850e-47 |
| Msa0141400 | Msa1006810 | 0.826890 | 2.116423e-54 | -8.615850e-47 |
| Msa0149300 | Msa1006810 | 0.813539 | 2.431928e-51 | -8.615850e-47 |
| Msa0150230 | Msa1006810 | 0.800371 | 1.487023e-48 | -8.615850e-47 |
| Msa0152560 | Msa1006810 | 0.819796 | 9.621512e-53 | -8.615850e-47 |
| Msa0170210 | Msa1006810 | 0.823521 | 1.324378e-53 | -8.615850e-47 |
| Msa0183850 | Msa1006810 | 0.811568 | 6.558590e-51 | -8.615850e-47 |
| Msa0187030 | Msa1006810 | 0.824645 | 7.214202e-54 | -8.615850e-47 |
| Msa0187830 | Msa1006810 | 0.819377 | 1.199300e-52 | -8.615850e-47 |
| Msa0188150 | Msa1006810 | 0.800263 | 1.564797e-48 | -8.615850e-47 |
| Msa0189040 | Msa1006810 | 0.816453 | 5.488402e-52 | -8.615850e-47 |
| Msa0190310 | Msa1006810 | 0.801440 | 8.995366e-49 | -8.615850e-47 |
| Msa0192640 | Msa1006810 | 0.809181 | 2.147720e-50 | -8.615850e-47 |
| Msa0204960 | Msa1006810 | 0.808048 | 3.749543e-50 | -8.615850e-47 |
| Msa0207350 | Msa1006810 | 0.864203 | 1.439336e-64 | -8.615850e-47 |
| Msa0214550 | Msa1006810 | 0.808984 | 2.367764e-50 | -8.615850e-47 |
| Msa0217700 | Msa1006810 | 0.842673 | 2.239244e-58 | -8.615850e-47 |
| Msa0220730 | Msa1006810 | 0.837079 | 6.422022e-57 | -8.615850e-47 |
| Msa0225220 | Msa1006810 | 0.804069 | 2.577676e-49 | -8.615850e-47 |
| Msa0227340 | Msa1006810 | 0.821358 | 4.212041e-53 | -8.615850e-47 |
| Msa0230150 | Msa1006810 | 0.806601 | 7.599552e-50 | -8.615850e-47 |
| Msa0231190 | Msa1006810 | 0.815998 | 6.935083e-52 | -8.615850e-47 |
| Msa0232020 | Msa1006810 | 0.823731 | 1.182775e-53 | -8.615850e-47 |
| Msa0237210 | Msa1006810 | 0.821851 | 3.240889e-53 | -8.615850e-47 |
| Msa0367870 | Msa1006810 | 0.806532 | 7.858508e-50 | -8.615850e-47 |
| Msa0378720 | Msa1006810 | 0.812973 | 3.237483e-51 | -8.615850e-47 |
| Msa0381610 | Msa1006810 | -0.812830 | 3.480049e-51 | -8.615850e-47 |
| Msa0382370 | Msa1006810 | 0.819139 | 1.358526e-52 | -8.615850e-47 |
| Msa0389210 | Msa1006810 | 0.804455 | 2.142117e-49 | -8.615850e-47 |
| Msa0389910 | Msa1006810 | 0.821737 | 3.444014e-53 | -8.615850e-47 |
| Msa0393620 | Msa1006810 | 0.804880 | 1.746620e-49 | -8.615850e-47 |
| Msa0398200 | Msa1006810 | 0.805207 | 1.492039e-49 | -8.615850e-47 |
| Msa0403640 | Msa1006810 | 0.816096 | 6.595770e-52 | -8.615850e-47 |
| Msa0403770 | Msa1006810 | 0.804940 | 1.696726e-49 | -8.615850e-47 |
| Msa0427120 | Msa1006810 | 0.801937 | 7.113230e-49 | -8.615850e-47 |
| Msa0432160 | Msa1006810 | 0.835356 | 1.760508e-56 | -8.615850e-47 |
| Msa0432670 | Msa1006810 | 0.816366 | 5.737627e-52 | -8.615850e-47 |
| Msa0450400 | Msa1006810 | -0.853342 | 2.545420e-61 | -8.615850e-47 |
| Msa0460590 | Msa1006810 | 0.800189 | 1.619405e-48 | -8.615850e-47 |
| Msa0467100 | Msa1006810 | 0.850076 | 2.144980e-60 | -8.615850e-47 |
| Msa0468410 | Msa1006810 | 0.836677 | 8.133740e-57 | -8.615850e-47 |
| Msa0474730 | Msa1006810 | 0.801801 | 7.586939e-49 | -8.615850e-47 |
| Msa0476680 | Msa1006810 | 0.839261 | 1.761401e-57 | -8.615850e-47 |
| Msa0481970 | Msa1006810 | 0.805756 | 1.144899e-49 | -8.615850e-47 |
| Msa0999680 | Msa1006810 | 0.807561 | 4.759320e-50 | -8.615850e-47 |
| Msa1002850 | Msa1006810 | 0.801138 | 1.036917e-48 | -8.615850e-47 |
| Msa1006810 | Msa1022820 | 0.812148 | 4.904583e-51 | -8.615850e-47 |
| Msa1006810 | Msa1034500 | 0.841847 | 3.707613e-58 | -8.615850e-47 |
| Msa1006810 | Msa1038060 | 0.816585 | 5.125621e-52 | -8.615850e-47 |
| Msa1006810 | Msa1043330 | 0.806972 | 6.344315e-50 | -8.615850e-47 |
| Msa1006810 | Msa1061980 | 0.803191 | 3.922481e-49 | -8.615850e-47 |
| Msa1006810 | Msa1063420 | 0.815781 | 7.752052e-52 | -8.615850e-47 |
| Msa1006810 | Msa1065010 | 0.813008 | 3.181536e-51 | -8.615850e-47 |
| Msa1006810 | Msa1080960 | 0.818579 | 1.820691e-52 | -8.615850e-47 |
| Msa1006810 | Msa1089450 | 0.839984 | 1.142258e-57 | -8.615850e-47 |
| Msa1006810 | Msa1094190 | 0.802791 | 4.743132e-49 | -8.615850e-47 |
| Msa1006810 | Msa1101090 | 0.814542 | 1.461078e-51 | -8.615850e-47 |
| Msa1006810 | Msa1111380 | 0.818219 | 2.196884e-52 | -8.615850e-47 |
| Msa1006810 | Msa1121490 | 0.819140 | 1.357639e-52 | -8.615850e-47 |
| Msa1006810 | Msa1127590 | 0.801657 | 8.120355e-49 | -8.615850e-47 |
| Msa1006810 | Msa1131050 | 0.804945 | 1.692590e-49 | -8.615850e-47 |
| Msa1006810 | Msa1135920 | 0.858847 | 6.218996e-63 | -8.615850e-47 |
| Msa1006810 | Msa1142670 | 0.812590 | 3.927548e-51 | -8.615850e-47 |
| Msa1006810 | Msa1145810 | 0.809149 | 2.181856e-50 | -8.615850e-47 |
| Msa1006810 | Msa1155170 | -0.808511 | 2.987706e-50 | -8.615850e-47 |
| Msa1006810 | Msa1162780 | 0.800912 | 1.153559e-48 | -8.615850e-47 |
| Msa1006810 | Msa1204100 | -0.806544 | 7.812379e-50 | -8.615850e-47 |
| Msa1006810 | Msa1218450 | 0.801650 | 8.146420e-49 | -8.615850e-47 |
| Msa1006810 | Msa1219000 | 0.819977 | 8.745396e-53 | -8.615850e-47 |
| Msa1006810 | Msa1225100 | 0.821210 | 4.557500e-53 | -8.615850e-47 |
| Msa1006810 | Msa1225860 | -0.822546 | 2.235411e-53 | -8.615850e-47 |
| Msa1006810 | Msa1226270 | 0.835545 | 1.576809e-56 | -8.615850e-47 |
| Msa1006810 | Msa1226470 | 0.801850 | 7.411501e-49 | -8.615850e-47 |
| Msa1006810 | Msa1232700 | 0.803645 | 3.157381e-49 | -8.615850e-47 |
| Msa1006810 | Msa1238820 | 0.815266 | 1.009347e-51 | -8.615850e-47 |
| Msa1006810 | Msa1243870 | 0.824503 | 7.793468e-54 | -8.615850e-47 |
| Msa1006810 | Msa1246360 | 0.815876 | 7.382647e-52 | -8.615850e-47 |
| Msa1006810 | Msa1271130 | 0.836232 | 1.055615e-56 | -8.615850e-47 |
| Msa1006810 | Msa1275450 | 0.827621 | 1.413937e-54 | -8.615850e-47 |
| Msa1006810 | Msa1275590 | 0.822379 | 2.444891e-53 | -8.615850e-47 |
| Msa1006810 | Msa1277080 | 0.804804 | 1.811720e-49 | -8.615850e-47 |
| Msa1006810 | Msa1283740 | 0.804902 | 1.728072e-49 | -8.615850e-47 |
| Msa1006810 | Msa1285550 | 0.808296 | 3.321340e-50 | -8.615850e-47 |
| Msa1006810 | Msa1323690 | 0.804149 | 2.480914e-49 | -8.615850e-47 |
| Msa1006810 | Msa1329050 | -0.808213 | 3.459489e-50 | -8.615850e-47 |
| Msa1006810 | Msa1329870 | 0.820463 | 6.769693e-53 | -8.615850e-47 |
| Msa1006810 | Msa1332760 | 0.821099 | 4.834967e-53 | -8.615850e-47 |
| Msa1006810 | Msa1340200 | 0.810397 | 1.176599e-50 | -8.615850e-47 |
| Msa1006810 | Msa1341840 | 0.830269 | 3.229546e-55 | -8.615850e-47 |
| Msa1006810 | Msa1345810 | 0.816693 | 4.849108e-52 | -8.615850e-47 |
| Msa1006810 | Msa1353470 | 0.800630 | 1.317302e-48 | -8.615850e-47 |
| Msa1006810 | Msa1353890 | 0.820426 | 6.903476e-53 | -8.615850e-47 |
| Msa1006810 | Msa1365610 | 0.800053 | 1.726073e-48 | -8.615850e-47 |
| Msa1006810 | Msa1369690 | 0.808083 | 3.687150e-50 | -8.615850e-47 |
| Msa1006810 | Msa1380220 | 0.815023 | 1.143407e-51 | -8.615850e-47 |
| Msa1006810 | Msa1381480 | 0.807089 | 5.993817e-50 | -8.615850e-47 |
| Msa1006810 | Msa1393840 | -0.818224 | 2.191087e-52 | -8.615850e-47 |
| Msa1006810 | Msa1405220 | 0.814861 | 1.241852e-51 | -8.615850e-47 |
| Msa1006810 | Msa1408010 | 0.800219 | 1.596837e-48 | -8.615850e-47 |
| Msa1006810 | Msa1410420 | 0.819644 | 1.042163e-52 | -8.615850e-47 |
| Msa1006810 | Msa1416370 | 0.802185 | 6.324070e-49 | -8.615850e-47 |
| Msa1006810 | Msa1418240 | 0.857086 | 2.074424e-62 | -8.615850e-47 |
| Msa1006810 | Msa1424350 | 0.800400 | 1.467130e-48 | -8.615850e-47 |
| Msa1006810 | Msa1424630 | 0.823102 | 1.659739e-53 | -8.615850e-47 |
| Msa1006810 | Msa1425090 | 0.806140 | 9.506472e-50 | -8.615850e-47 |
| Msa1006810 | Msa1430550 | 0.811116 | 8.223466e-51 | -8.615850e-47 |
| Msa1006810 | Msa1440310 | 0.840006 | 1.127574e-57 | -8.615850e-47 |
| Msa1006810 | Msa1442920 | 0.817613 | 3.011857e-52 | -8.615850e-47 |
| Msa1006810 | Msa1445390 | -0.809507 | 1.828704e-50 | -8.615850e-47 |
| Msa1006810 | Msa1447180 | 0.818147 | 2.281167e-52 | -8.615850e-47 |
| Msa1006810 | Msa1452710 | 0.808492 | 3.016700e-50 | -8.615850e-47 |
| Msa1006810 | Msa1453360 | 0.827563 | 1.460069e-54 | -8.615850e-47 |
| Msa1006810 | Msa1454530 | 0.821871 | 3.206189e-53 | -8.615850e-47 |
| Msa1006810 | Msa1454570 | 0.808038 | 3.769400e-50 | -8.615850e-47 |
| Msa1006810 | Msa1456230 | 0.800392 | 1.472636e-48 | -8.615850e-47 |
| Msa1006810 | Msa1457160 | 0.807125 | 5.888897e-50 | -8.615850e-47 |
| Msa1006810 | Msa1458340 | 0.816593 | 5.104959e-52 | -8.615850e-47 |
| Msa1006810 | Msa1458680 | 0.818216 | 2.200515e-52 | -8.615850e-47 |
| Msa1006810 | Msa1459100 | 0.801579 | 8.424915e-49 | -8.615850e-47 |
| Msa1006810 | Msa1461370 | 0.817426 | 3.317631e-52 | -8.615850e-47 |
| Msa1006810 | Msa1461540 | 0.822592 | 2.181889e-53 | -8.615850e-47 |
| Msa1006810 | Msa1462360 | 0.826429 | 2.726287e-54 | -8.615850e-47 |
| Msa0240900 | Msa1006810 | 0.821205 | 4.569550e-53 | -8.615850e-47 |
| Msa0241140 | Msa1006810 | 0.818501 | 1.896966e-52 | -8.615850e-47 |
| Msa0241830 | Msa1006810 | 0.802238 | 6.167882e-49 | -8.615850e-47 |
| Msa0261170 | Msa1006810 | 0.802201 | 6.276280e-49 | -8.615850e-47 |
| Msa0264830 | Msa1006810 | 0.829261 | 5.684398e-55 | -8.615850e-47 |
| Msa0267790 | Msa1006810 | 0.811960 | 5.391466e-51 | -8.615850e-47 |
| Msa0269560 | Msa1006810 | 0.827962 | 1.170983e-54 | -8.615850e-47 |
| Msa0271770 | Msa1006810 | 0.808606 | 2.851478e-50 | -8.615850e-47 |
| Msa0274980 | Msa1006810 | 0.820182 | 7.851984e-53 | -8.615850e-47 |
| Msa0275020 | Msa1006810 | 0.802024 | 6.827474e-49 | -8.615850e-47 |
| Msa0279850 | Msa1006810 | 0.837051 | 6.528295e-57 | -8.615850e-47 |
| Msa0287870 | Msa1006810 | 0.816183 | 6.307367e-52 | -8.615850e-47 |
| Msa0288080 | Msa1006810 | 0.813536 | 2.435583e-51 | -8.615850e-47 |
| Msa0290720 | Msa1006810 | 0.801567 | 8.470421e-49 | -8.615850e-47 |
| Msa0296820 | Msa1006810 | 0.829824 | 4.146502e-55 | -8.615850e-47 |
| Msa0300320 | Msa1006810 | 0.807890 | 4.052430e-50 | -8.615850e-47 |
| Msa0302870 | Msa1006810 | 0.818296 | 2.111206e-52 | -8.615850e-47 |
| Msa0312910 | Msa1006810 | 0.805278 | 1.442262e-49 | -8.615850e-47 |
| Msa0315690 | Msa1006810 | 0.831801 | 1.358826e-55 | -8.615850e-47 |
| Msa0317970 | Msa1006810 | 0.853062 | 3.062255e-61 | -8.615850e-47 |
| Msa0322900 | Msa1006810 | 0.849027 | 4.206772e-60 | -8.615850e-47 |
| Msa0340340 | Msa1006810 | 0.827102 | 1.883523e-54 | -8.615850e-47 |
| Msa0341690 | Msa1006810 | 0.815635 | 8.356976e-52 | -8.615850e-47 |
| Msa0342010 | Msa1006810 | 0.808893 | 2.476229e-50 | -8.615850e-47 |
| Msa0357900 | Msa1006810 | 0.815523 | 8.848956e-52 | -8.615850e-47 |
| Msa0358890 | Msa1006810 | 0.804325 | 2.280652e-49 | -8.615850e-47 |
| Msa0485240 | Msa1006810 | 0.861813 | 7.879221e-64 | -8.615850e-47 |
| Msa0518030 | Msa1006810 | 0.818770 | 1.647920e-52 | -8.615850e-47 |
| Msa0521010 | Msa1006810 | 0.841049 | 6.013194e-58 | -8.615850e-47 |
| Msa0521670 | Msa1006810 | 0.835148 | 1.986683e-56 | -8.615850e-47 |
| Msa0526730 | Msa1006810 | 0.803927 | 2.760089e-49 | -8.615850e-47 |
| Msa0529350 | Msa1006810 | 0.801815 | 7.536715e-49 | -8.615850e-47 |
| Msa0532960 | Msa1006810 | 0.804243 | 2.372057e-49 | -8.615850e-47 |
| Msa0532990 | Msa1006810 | 0.800379 | 1.481728e-48 | -8.615850e-47 |
| Msa0544660 | Msa1006810 | 0.807692 | 4.463396e-50 | -8.615850e-47 |
| Msa0549890 | Msa1006810 | 0.842192 | 3.004785e-58 | -8.615850e-47 |
| Msa0562570 | Msa1006810 | 0.829318 | 5.505213e-55 | -8.615850e-47 |
| Msa0579660 | Msa1006810 | 0.838346 | 3.037398e-57 | -8.615850e-47 |
| Msa0581690 | Msa1006810 | 0.808750 | 2.656383e-50 | -8.615850e-47 |
| Msa0582480 | Msa1006810 | 0.813928 | 1.996952e-51 | -8.615850e-47 |
| Msa0583360 | Msa1006810 | -0.819156 | 1.346395e-52 | -8.615850e-47 |
| Msa0586220 | Msa1006810 | 0.812389 | 4.345805e-51 | -8.615850e-47 |
| Msa0594920 | Msa1006810 | 0.808426 | 3.114994e-50 | -8.615850e-47 |
| Msa0601950 | Msa1006810 | 0.809334 | 1.992186e-50 | -8.615850e-47 |
| Msa0855870 | Msa1006810 | 0.809331 | 1.994459e-50 | -8.615850e-47 |
| Msa0867870 | Msa1006810 | 0.800615 | 1.326309e-48 | -8.615850e-47 |
| Msa0868160 | Msa1006810 | 0.826379 | 2.802218e-54 | -8.615850e-47 |
| Msa0870520 | Msa1006810 | 0.805944 | 1.045433e-49 | -8.615850e-47 |
| Msa0871720 | Msa1006810 | 0.823403 | 1.411361e-53 | -8.615850e-47 |
| Msa0894710 | Msa1006810 | 0.821758 | 3.405841e-53 | -8.615850e-47 |
| Msa0899970 | Msa1006810 | 0.804609 | 1.990351e-49 | -8.615850e-47 |
| Msa0902830 | Msa1006810 | 0.815244 | 1.020765e-51 | -8.615850e-47 |
| Msa0903710 | Msa1006810 | 0.802868 | 4.572543e-49 | -8.615850e-47 |
| Msa0903780 | Msa1006810 | 0.823328 | 1.469428e-53 | -8.615850e-47 |
| Msa0921420 | Msa1006810 | 0.816964 | 4.214144e-52 | -8.615850e-47 |
| Msa0933760 | Msa1006810 | 0.807839 | 4.154252e-50 | -8.615850e-47 |
| Msa0934140 | Msa1006810 | 0.819191 | 1.322203e-52 | -8.615850e-47 |
| Msa0936390 | Msa1006810 | 0.836024 | 1.192083e-56 | -8.615850e-47 |
| Msa0937020 | Msa1006810 | 0.818376 | 2.024514e-52 | -8.615850e-47 |
| Msa0960390 | Msa1006810 | 0.814965 | 1.177455e-51 | -8.615850e-47 |
| Msa0965080 | Msa1006810 | 0.803134 | 4.030067e-49 | -8.615850e-47 |
| Msa0965290 | Msa1006810 | 0.807392 | 5.170198e-50 | -8.615850e-47 |
| Msa0974290 | Msa1006810 | 0.834541 | 2.823866e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006810 | MtrunA17_Chr7g0217121 | 96.767 | 433 | 13 | 1 | 1 | 432 | 1 | 433 | 0.0 | 857 |
| Msa1006810 | MtrunA17_Chr6g0453031 | 51.957 | 460 | 157 | 13 | 1 | 432 | 1 | 424 | 8.21e-142 | 411 |
| Msa1006810 | MtrunA17_Chr3g0089011 | 67.296 | 159 | 43 | 3 | 278 | 432 | 2 | 155 | 6.00e-59 | 189 |
| Msa1006810 | MtrunA17_Chr1g0171871 | 38.754 | 289 | 144 | 8 | 162 | 431 | 90 | 364 | 1.16e-52 | 180 |
| Msa1006810 | MtrunA17_Chr8g0352771 | 47.977 | 173 | 68 | 4 | 262 | 431 | 102 | 255 | 3.85e-41 | 147 |
| Msa1006810 | MtrunA17_Chr3g0105871 | 49.398 | 166 | 64 | 4 | 265 | 430 | 87 | 232 | 3.47e-40 | 143 |
| Msa1006810 | MtrunA17_Chr5g0437471 | 40.887 | 203 | 99 | 3 | 230 | 432 | 59 | 240 | 4.99e-39 | 140 |
| Msa1006810 | MtrunA17_Chr7g0256501 | 36.929 | 241 | 119 | 8 | 203 | 431 | 206 | 425 | 8.94e-39 | 144 |
| Msa1006810 | MtrunA17_Chr3g0083531 | 45.455 | 165 | 71 | 3 | 266 | 430 | 115 | 260 | 4.08e-38 | 139 |
| Msa1006810 | MtrunA17_Chr7g0267591 | 40.828 | 169 | 88 | 3 | 263 | 431 | 123 | 279 | 1.30e-35 | 132 |
| Msa1006810 | MtrunA17_Chr7g0266401 | 39.367 | 221 | 105 | 6 | 219 | 431 | 206 | 405 | 1.37e-35 | 135 |
| Msa1006810 | MtrunA17_Chr1g0196971 | 39.545 | 220 | 104 | 6 | 219 | 430 | 170 | 368 | 7.00e-35 | 133 |
| Msa1006810 | MtrunA17_Chr5g0431071 | 43.452 | 168 | 74 | 3 | 263 | 430 | 107 | 253 | 1.36e-34 | 129 |
| Msa1006810 | MtrunA17_Chr5g0412021 | 70.652 | 92 | 23 | 2 | 306 | 393 | 1 | 92 | 1.68e-34 | 124 |
| Msa1006810 | MtrunA17_Chr7g0248731 | 54.198 | 131 | 37 | 3 | 306 | 432 | 1 | 112 | 1.20e-33 | 122 |
| Msa1006810 | MtrunA17_Chr8g0388481 | 43.023 | 172 | 76 | 4 | 264 | 430 | 213 | 367 | 9.40e-33 | 127 |
| Msa1006810 | MtrunA17_Chr8g0392761 | 36.029 | 272 | 120 | 8 | 161 | 430 | 54 | 273 | 3.32e-31 | 120 |
| Msa1006810 | MtrunA17_Chr3g0113971 | 39.394 | 165 | 79 | 3 | 268 | 432 | 93 | 236 | 9.03e-31 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1006810 | AT3G28850.1 | 52.620 | 458 | 159 | 16 | 1 | 431 | 1 | 427 | 1.61e-125 | 370 |
| Msa1006810 | AT5G39865.1 | 46.171 | 457 | 152 | 11 | 1 | 431 | 1 | 389 | 8.59e-125 | 367 |
| Msa1006810 | AT3G57070.1 | 36.499 | 337 | 129 | 12 | 157 | 431 | 103 | 416 | 2.54e-50 | 176 |
| Msa1006810 | AT2G41330.1 | 31.519 | 441 | 201 | 18 | 19 | 431 | 34 | 401 | 1.90e-49 | 173 |
| Msa1006810 | AT5G13810.1 | 42.365 | 203 | 85 | 5 | 229 | 430 | 101 | 272 | 2.30e-40 | 145 |
| Msa1006810 | AT5G58530.1 | 41.026 | 195 | 86 | 4 | 248 | 432 | 92 | 267 | 4.41e-40 | 144 |
| Msa1006810 | AT5G03870.1 | 34.535 | 333 | 136 | 11 | 159 | 430 | 72 | 383 | 4.69e-38 | 142 |
| Msa1006810 | AT1G64500.1 | 45.614 | 171 | 76 | 5 | 263 | 430 | 209 | 365 | 6.10e-37 | 139 |
| Msa1006810 | AT4G10630.1 | 35.959 | 292 | 142 | 9 | 154 | 430 | 72 | 333 | 4.28e-35 | 133 |
| Msa1006810 | AT5G06470.1 | 43.452 | 168 | 80 | 4 | 263 | 430 | 86 | 238 | 1.81e-34 | 129 |
| Msa1006810 | AT1G32760.1 | 36.765 | 272 | 121 | 8 | 161 | 430 | 91 | 313 | 3.94e-31 | 122 |
| Msa1006810 | AT3G11773.1 | 39.130 | 161 | 76 | 3 | 270 | 430 | 11 | 149 | 8.03e-26 | 102 |
| Msa1006810 | AT5G01420.1 | 39.645 | 169 | 80 | 4 | 263 | 430 | 253 | 400 | 1.05e-23 | 102 |
| Msa1006810 | AT3G11773.2 | 36.154 | 130 | 61 | 3 | 301 | 430 | 92 | 199 | 4.13e-16 | 77.0 |
Find 74 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCATGTGTTGATTGTTTC+TGG | 0.087504 | 7_1:-5662138 | None:intergenic |
| CATCAATTGATGTTTGTTTA+AGG | 0.118181 | 7_1:-5662383 | None:intergenic |
| AAGATTGTTCCTAGTGTTAA+TGG | 0.198810 | 7_1:+5661850 | Msa1006810:CDS |
| GGTGTTCTTGTTGGTGTCTT+TGG | 0.219568 | 7_1:-5662105 | None:intergenic |
| ATTTGAAGCCACATTGATTT+AGG | 0.250995 | 7_1:-5662258 | None:intergenic |
| GATGTTTGTTTAAGGTAAAA+AGG | 0.259720 | 7_1:-5662375 | None:intergenic |
| AATCAACACATGGGAGTTAA+TGG | 0.270519 | 7_1:+5662146 | Msa1006810:CDS |
| AGAGATGTATCAATGCATTT+AGG | 0.299301 | 7_1:+5662564 | Msa1006810:CDS |
| GGTCGTGAAGAAGGCGAGTT+TGG | 0.317310 | 7_1:+5662873 | Msa1006810:CDS |
| ACATGCATTGAATAGCTTCT+TGG | 0.319625 | 7_1:-5661724 | None:intergenic |
| TGTCCGGATTGTAATGAAAA+TGG | 0.328066 | 7_1:+5662906 | Msa1006810:CDS |
| GTGAGAATTGTGGTGATATA+AGG | 0.346142 | 7_1:+5662766 | Msa1006810:CDS |
| AGAAAAGGAAAATGAGAAAA+GGG | 0.347133 | 7_1:+5661963 | Msa1006810:CDS |
| GTTCCTTGTGAAACTTGTTT+TGG | 0.367950 | 7_1:+5662792 | Msa1006810:CDS |
| AAGAAAAGGAAAATGAGAAA+AGG | 0.368729 | 7_1:+5661962 | Msa1006810:CDS |
| TTCTACTTCACAAGCTTAAG+AGG | 0.391723 | 7_1:+5662468 | Msa1006810:CDS |
| GTTTGGATTCCAACGTTGTC+CGG | 0.407446 | 7_1:+5662890 | Msa1006810:CDS |
| ATCAATGCATTTAGGATTCA+AGG | 0.410818 | 7_1:+5662572 | Msa1006810:CDS |
| TCACCAGGTGGTGTTCTTGT+TGG | 0.422909 | 7_1:-5662114 | None:intergenic |
| ATTGAATAGCTTCTTGGAAC+AGG | 0.429704 | 7_1:-5661718 | None:intergenic |
| ATCTTGAGAGAGTTCTTGTA+AGG | 0.439309 | 7_1:-5662349 | None:intergenic |
| TGGAAAGCTTGAGAAATTGT+TGG | 0.442255 | 7_1:+5662707 | Msa1006810:CDS |
| GCACTCACATCAACCACATT+AGG | 0.444268 | 7_1:+5661790 | Msa1006810:CDS |
| CTAAATGATGAAATCACATC+AGG | 0.449410 | 7_1:-5662321 | None:intergenic |
| ATTGAGAAACTTCATGAAGA+TGG | 0.453523 | 7_1:+5662687 | Msa1006810:CDS |
| GAAAAGGGAGAAGGAGAAGA+AGG | 0.455791 | 7_1:+5661978 | Msa1006810:CDS |
| CTCTCAAAATCATCCTCACT+TGG | 0.477958 | 7_1:-5662518 | None:intergenic |
| TTAGGTGATTTGTATGGTGG+AGG | 0.481073 | 7_1:+5662612 | Msa1006810:CDS |
| AGGTGATTCGGCGATCGAAA+AGG | 0.481626 | 7_1:-5662189 | None:intergenic |
| TGTAAAATCTACTATGAAGA+TGG | 0.484572 | 7_1:+5662819 | Msa1006810:CDS |
| GATGATCATGGTCGTGAAGA+AGG | 0.495634 | 7_1:+5662864 | Msa1006810:CDS |
| TGAAGCCACATTGATTTAGG+AGG | 0.496188 | 7_1:-5662255 | None:intergenic |
| TAAGGTTGGTGGAAAGGAAA+AGG | 0.498704 | 7_1:+5662440 | Msa1006810:CDS |
| TTTGTTGGTAAGAATTACAT+TGG | 0.498874 | 7_1:+5662651 | Msa1006810:CDS |
| TTGATTGTTTCTGGTTCACC+AGG | 0.504436 | 7_1:-5662129 | None:intergenic |
| ACAAACATCAATTGATGAAG+AGG | 0.514395 | 7_1:+5662389 | Msa1006810:CDS |
| TTTGTGGATGTTAAGGTTGG+TGG | 0.516446 | 7_1:+5662429 | Msa1006810:CDS |
| TTTGATGTCAATGGTGGTGA+AGG | 0.524178 | 7_1:+5662225 | Msa1006810:CDS |
| CATCAGGATCAAAATCAACT+TGG | 0.528722 | 7_1:-5662305 | None:intergenic |
| GGAAAATGAGAAAAGGGAGA+AGG | 0.534247 | 7_1:+5661969 | Msa1006810:CDS |
| GAATTACATTGGTGGAGTTG+AGG | 0.540698 | 7_1:+5662662 | Msa1006810:CDS |
| GTTGGTAAGAATTACATTGG+TGG | 0.551303 | 7_1:+5662654 | Msa1006810:CDS |
| GAGGAAGAATATGATGATCA+TGG | 0.555068 | 7_1:+5662852 | Msa1006810:CDS |
| GGTTGATTGAGGCAAAGACT+TGG | 0.560977 | 7_1:+5662046 | Msa1006810:CDS |
| TCTACTTCACAAGCTTAAGA+GGG | 0.584829 | 7_1:+5662469 | Msa1006810:CDS |
| TAACTGTCATCTTCAGATTG+AGG | 0.585248 | 7_1:-5661757 | None:intergenic |
| GGATGTTAAGGTTGGTGGAA+AGG | 0.588762 | 7_1:+5662434 | Msa1006810:CDS |
| CTGTCATCTTCAGATTGAGG+TGG | 0.591852 | 7_1:-5661754 | None:intergenic |
| AAAATTGAGGATAGTAGTGG+TGG | 0.600502 | 7_1:+5662741 | Msa1006810:CDS |
| TTTGAAGAAGAAGAATTGAG+TGG | 0.600540 | 7_1:-5661823 | None:intergenic |
| ATTGTTTCTGGTTCACCAGG+TGG | 0.602186 | 7_1:-5662126 | None:intergenic |
| AACCAGAAACAATCAACACA+TGG | 0.603332 | 7_1:+5662136 | Msa1006810:CDS |
| CATTACAATCCGGACAACGT+TGG | 0.612211 | 7_1:-5662899 | None:intergenic |
| CTTCCAAAACAAGTTTCACA+AGG | 0.615798 | 7_1:-5662795 | None:intergenic |
| TCATGAACACCATTAACACT+AGG | 0.618194 | 7_1:-5661859 | None:intergenic |
| AACACATGGGAGTTAATGGA+AGG | 0.623703 | 7_1:+5662150 | Msa1006810:CDS |
| GGAATGTTGTGAGAAAATTG+AGG | 0.625190 | 7_1:+5662728 | Msa1006810:CDS |
| TGTCATCTTCAGATTGAGGT+GGG | 0.627466 | 7_1:-5661753 | None:intergenic |
| ATGAAGATTGTTGCCAAGTG+AGG | 0.627753 | 7_1:+5662505 | Msa1006810:CDS |
| TTGTAACTAGTAGCAGCACA+CGG | 0.628118 | 7_1:-5662943 | None:intergenic |
| TGTAACTAGTAGCAGCACAC+GGG | 0.628183 | 7_1:-5662942 | None:intergenic |
| AGTGGTGGATGTGAGAATTG+TGG | 0.628466 | 7_1:+5662756 | Msa1006810:CDS |
| GAGAAAATTGAGGATAGTAG+TGG | 0.638020 | 7_1:+5662738 | Msa1006810:CDS |
| TGGTGGAGGAAGATTGCCAA+AGG | 0.640203 | 7_1:+5662626 | Msa1006810:CDS |
| ACACCAACAAGAACACCACC+TGG | 0.657599 | 7_1:+5662111 | Msa1006810:CDS |
| CTACTTCACAAGCTTAAGAG+GGG | 0.665104 | 7_1:+5662470 | Msa1006810:CDS |
| TTGATGTGAGTGCAACAACA+TGG | 0.691111 | 7_1:-5661780 | None:intergenic |
| TGGTTTGAGAGTACCTAATG+TGG | 0.692293 | 7_1:-5661803 | None:intergenic |
| ACCAGAAACAATCAACACAT+GGG | 0.696633 | 7_1:+5662137 | Msa1006810:CDS |
| TTGATCCTCCTAAATCAATG+TGG | 0.706563 | 7_1:+5662250 | Msa1006810:CDS |
| GTAACTAGTAGCAGCACACG+GGG | 0.716227 | 7_1:-5662941 | None:intergenic |
| AATGTGGCTTCAAATTACCG+AGG | 0.717932 | 7_1:+5662266 | Msa1006810:CDS |
| TGAAGATGGTGATGACGACG+AGG | 0.723023 | 7_1:+5662833 | Msa1006810:CDS |
| AATGCATTTAGGATTCAAGG+AGG | 0.743777 | 7_1:+5662575 | Msa1006810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATTTCAAGTTTTGTAAT+GGG | + | chr7_1:5661878-5661897 | Msa1006810:CDS | 20.0% |
| !!! | AAAGTGAAAGAATTTTCAAT+GGG | + | chr7_1:5662024-5662043 | Msa1006810:CDS | 20.0% |
| !!! | ATGTTTGTTTAAGGTAAAAA+GGG | - | chr7_1:5662377-5662396 | None:intergenic | 20.0% |
| !!! | ATGATTTCAAGTTTTGTAAT+GGG | + | chr7_1:5661878-5661897 | Msa1006810:CDS | 20.0% |
| !!! | AAAGTGAAAGAATTTTCAAT+GGG | + | chr7_1:5662024-5662043 | Msa1006810:CDS | 20.0% |
| !!! | ATGTTTGTTTAAGGTAAAAA+GGG | - | chr7_1:5662377-5662396 | None:intergenic | 20.0% |
| !!! | CATGATTTCAAGTTTTGTAA+TGG | + | chr7_1:5661877-5661896 | Msa1006810:CDS | 25.0% |
| !! | TTAAAGAGAGTGAAAGTTTT+AGG | + | chr7_1:5661905-5661924 | Msa1006810:CDS | 25.0% |
| ! | AAGAAAAGGAAAATGAGAAA+AGG | + | chr7_1:5661962-5661981 | Msa1006810:CDS | 25.0% |
| ! | AGAAAAGGAAAATGAGAAAA+GGG | + | chr7_1:5661963-5661982 | Msa1006810:CDS | 25.0% |
| !! | GAAAGTGAAAGAATTTTCAA+TGG | + | chr7_1:5662023-5662042 | Msa1006810:CDS | 25.0% |
| !! | AAGTGAAAGAATTTTCAATG+GGG | + | chr7_1:5662025-5662044 | Msa1006810:CDS | 25.0% |
| !! | GATGTTTGTTTAAGGTAAAA+AGG | - | chr7_1:5662378-5662397 | None:intergenic | 25.0% |
| ! | CATCAATTGATGTTTGTTTA+AGG | - | chr7_1:5662386-5662405 | None:intergenic | 25.0% |
| !!! | AATGAAAGATGATGTTTTTG+TGG | + | chr7_1:5662413-5662432 | Msa1006810:CDS | 25.0% |
| !! | TTTGTTGGTAAGAATTACAT+TGG | + | chr7_1:5662651-5662670 | Msa1006810:CDS | 25.0% |
| ! | TGTAAAATCTACTATGAAGA+TGG | + | chr7_1:5662819-5662838 | Msa1006810:CDS | 25.0% |
| !!! | CATGATTTCAAGTTTTGTAA+TGG | + | chr7_1:5661877-5661896 | Msa1006810:CDS | 25.0% |
| !! | TTAAAGAGAGTGAAAGTTTT+AGG | + | chr7_1:5661905-5661924 | Msa1006810:CDS | 25.0% |
| ! | AAGAAAAGGAAAATGAGAAA+AGG | + | chr7_1:5661962-5661981 | Msa1006810:CDS | 25.0% |
| ! | AGAAAAGGAAAATGAGAAAA+GGG | + | chr7_1:5661963-5661982 | Msa1006810:CDS | 25.0% |
| !! | GAAAGTGAAAGAATTTTCAA+TGG | + | chr7_1:5662023-5662042 | Msa1006810:CDS | 25.0% |
| !! | AAGTGAAAGAATTTTCAATG+GGG | + | chr7_1:5662025-5662044 | Msa1006810:CDS | 25.0% |
| !! | GATGTTTGTTTAAGGTAAAA+AGG | - | chr7_1:5662378-5662397 | None:intergenic | 25.0% |
| ! | CATCAATTGATGTTTGTTTA+AGG | - | chr7_1:5662386-5662405 | None:intergenic | 25.0% |
| !!! | AATGAAAGATGATGTTTTTG+TGG | + | chr7_1:5662413-5662432 | Msa1006810:CDS | 25.0% |
| !! | TTTGTTGGTAAGAATTACAT+TGG | + | chr7_1:5662651-5662670 | Msa1006810:CDS | 25.0% |
| ! | TGTAAAATCTACTATGAAGA+TGG | + | chr7_1:5662819-5662838 | Msa1006810:CDS | 25.0% |
| TTTGAAGAAGAAGAATTGAG+TGG | - | chr7_1:5661826-5661845 | None:intergenic | 30.0% | |
| AAGATTGTTCCTAGTGTTAA+TGG | + | chr7_1:5661850-5661869 | Msa1006810:CDS | 30.0% | |
| GCAAAAACTCAAGAAAGAAA+AGG | + | chr7_1:5661948-5661967 | Msa1006810:CDS | 30.0% | |
| !! | ATTTGAAGCCACATTGATTT+AGG | - | chr7_1:5662261-5662280 | None:intergenic | 30.0% |
| CTAAATGATGAAATCACATC+AGG | - | chr7_1:5662324-5662343 | None:intergenic | 30.0% | |
| ACAAACATCAATTGATGAAG+AGG | + | chr7_1:5662389-5662408 | Msa1006810:CDS | 30.0% | |
| !! | TGATGTTTTTGTGGATGTTA+AGG | + | chr7_1:5662422-5662441 | Msa1006810:CDS | 30.0% |
| AGAGATGTATCAATGCATTT+AGG | + | chr7_1:5662564-5662583 | Msa1006810:CDS | 30.0% | |
| ! | ATCAATGCATTTAGGATTCA+AGG | + | chr7_1:5662572-5662591 | Msa1006810:CDS | 30.0% |
| TTCTTACCAACAAAAACCTT+TGG | - | chr7_1:5662645-5662664 | None:intergenic | 30.0% | |
| ATTGAGAAACTTCATGAAGA+TGG | + | chr7_1:5662687-5662706 | Msa1006810:CDS | 30.0% | |
| ! | AGTCCATTTTCATTACAATC+CGG | - | chr7_1:5662912-5662931 | None:intergenic | 30.0% |
| TTTGAAGAAGAAGAATTGAG+TGG | - | chr7_1:5661826-5661845 | None:intergenic | 30.0% | |
| AAGATTGTTCCTAGTGTTAA+TGG | + | chr7_1:5661850-5661869 | Msa1006810:CDS | 30.0% | |
| GCAAAAACTCAAGAAAGAAA+AGG | + | chr7_1:5661948-5661967 | Msa1006810:CDS | 30.0% | |
| !! | ATTTGAAGCCACATTGATTT+AGG | - | chr7_1:5662261-5662280 | None:intergenic | 30.0% |
| CTAAATGATGAAATCACATC+AGG | - | chr7_1:5662324-5662343 | None:intergenic | 30.0% | |
| ACAAACATCAATTGATGAAG+AGG | + | chr7_1:5662389-5662408 | Msa1006810:CDS | 30.0% | |
| !! | TGATGTTTTTGTGGATGTTA+AGG | + | chr7_1:5662422-5662441 | Msa1006810:CDS | 30.0% |
| AGAGATGTATCAATGCATTT+AGG | + | chr7_1:5662564-5662583 | Msa1006810:CDS | 30.0% | |
| ! | ATCAATGCATTTAGGATTCA+AGG | + | chr7_1:5662572-5662591 | Msa1006810:CDS | 30.0% |
| TTCTTACCAACAAAAACCTT+TGG | - | chr7_1:5662645-5662664 | None:intergenic | 30.0% | |
| ATTGAGAAACTTCATGAAGA+TGG | + | chr7_1:5662687-5662706 | Msa1006810:CDS | 30.0% | |
| ! | AGTCCATTTTCATTACAATC+CGG | - | chr7_1:5662912-5662931 | None:intergenic | 30.0% |
| ATTGAATAGCTTCTTGGAAC+AGG | - | chr7_1:5661721-5661740 | None:intergenic | 35.0% | |
| ACATGCATTGAATAGCTTCT+TGG | - | chr7_1:5661727-5661746 | None:intergenic | 35.0% | |
| TAACTGTCATCTTCAGATTG+AGG | - | chr7_1:5661760-5661779 | None:intergenic | 35.0% | |
| TCATGAACACCATTAACACT+AGG | - | chr7_1:5661862-5661881 | None:intergenic | 35.0% | |
| !! | ATTTTCAATGGGGTTGATTG+AGG | + | chr7_1:5662035-5662054 | Msa1006810:CDS | 35.0% |
| AACCAGAAACAATCAACACA+TGG | + | chr7_1:5662136-5662155 | Msa1006810:CDS | 35.0% | |
| ACCAGAAACAATCAACACAT+GGG | + | chr7_1:5662137-5662156 | Msa1006810:CDS | 35.0% | |
| AATCAACACATGGGAGTTAA+TGG | + | chr7_1:5662146-5662165 | Msa1006810:CDS | 35.0% | |
| ! | CATCAAAAGAGAAGCTTTTG+AGG | - | chr7_1:5662212-5662231 | None:intergenic | 35.0% |
| ! | AGCTTCTCTTTTGATGTCAA+TGG | + | chr7_1:5662216-5662235 | Msa1006810:CDS | 35.0% |
| ! | TTCTCTTTTGATGTCAATGG+TGG | + | chr7_1:5662219-5662238 | Msa1006810:CDS | 35.0% |
| TTGATCCTCCTAAATCAATG+TGG | + | chr7_1:5662250-5662269 | Msa1006810:CDS | 35.0% | |
| !!! | GTTGAGTTTTGATTCTTCCT+CGG | - | chr7_1:5662286-5662305 | None:intergenic | 35.0% |
| CATCAGGATCAAAATCAACT+TGG | - | chr7_1:5662308-5662327 | None:intergenic | 35.0% | |
| ATCTTGAGAGAGTTCTTGTA+AGG | - | chr7_1:5662352-5662371 | None:intergenic | 35.0% | |
| ! | GTTTTTGTGGATGTTAAGGT+TGG | + | chr7_1:5662426-5662445 | Msa1006810:CDS | 35.0% |
| TTCTACTTCACAAGCTTAAG+AGG | + | chr7_1:5662468-5662487 | Msa1006810:CDS | 35.0% | |
| TCTACTTCACAAGCTTAAGA+GGG | + | chr7_1:5662469-5662488 | Msa1006810:CDS | 35.0% | |
| !! | AAGTGAGGATGATTTTGAGA+GGG | + | chr7_1:5662520-5662539 | Msa1006810:CDS | 35.0% |
| ! | AATGCATTTAGGATTCAAGG+AGG | + | chr7_1:5662575-5662594 | Msa1006810:CDS | 35.0% |
| !! | GAGCTTTTAGGTGATTTGTA+TGG | + | chr7_1:5662606-5662625 | Msa1006810:CDS | 35.0% |
| !! | CTTTTAGGTGATTTGTATGG+TGG | + | chr7_1:5662609-5662628 | Msa1006810:CDS | 35.0% |
| ! | AGATTGCCAAAGGTTTTTGT+TGG | + | chr7_1:5662636-5662655 | Msa1006810:CDS | 35.0% |
| ! | GTTGGTAAGAATTACATTGG+TGG | + | chr7_1:5662654-5662673 | Msa1006810:CDS | 35.0% |
| TGGAAAGCTTGAGAAATTGT+TGG | + | chr7_1:5662707-5662726 | Msa1006810:CDS | 35.0% | |
| GGAATGTTGTGAGAAAATTG+AGG | + | chr7_1:5662728-5662747 | Msa1006810:CDS | 35.0% | |
| GAGAAAATTGAGGATAGTAG+TGG | + | chr7_1:5662738-5662757 | Msa1006810:CDS | 35.0% | |
| AAAATTGAGGATAGTAGTGG+TGG | + | chr7_1:5662741-5662760 | Msa1006810:CDS | 35.0% | |
| GTGAGAATTGTGGTGATATA+AGG | + | chr7_1:5662766-5662785 | Msa1006810:CDS | 35.0% | |
| !! | GTTCCTTGTGAAACTTGTTT+TGG | + | chr7_1:5662792-5662811 | Msa1006810:CDS | 35.0% |
| CTTCCAAAACAAGTTTCACA+AGG | - | chr7_1:5662798-5662817 | None:intergenic | 35.0% | |
| GAGGAAGAATATGATGATCA+TGG | + | chr7_1:5662852-5662871 | Msa1006810:CDS | 35.0% | |
| TGTCCGGATTGTAATGAAAA+TGG | + | chr7_1:5662906-5662925 | Msa1006810:CDS | 35.0% | |
| ATTGAATAGCTTCTTGGAAC+AGG | - | chr7_1:5661721-5661740 | None:intergenic | 35.0% | |
| ACATGCATTGAATAGCTTCT+TGG | - | chr7_1:5661727-5661746 | None:intergenic | 35.0% | |
| TAACTGTCATCTTCAGATTG+AGG | - | chr7_1:5661760-5661779 | None:intergenic | 35.0% | |
| TCATGAACACCATTAACACT+AGG | - | chr7_1:5661862-5661881 | None:intergenic | 35.0% | |
| !! | ATTTTCAATGGGGTTGATTG+AGG | + | chr7_1:5662035-5662054 | Msa1006810:CDS | 35.0% |
| AACCAGAAACAATCAACACA+TGG | + | chr7_1:5662136-5662155 | Msa1006810:CDS | 35.0% | |
| ACCAGAAACAATCAACACAT+GGG | + | chr7_1:5662137-5662156 | Msa1006810:CDS | 35.0% | |
| AATCAACACATGGGAGTTAA+TGG | + | chr7_1:5662146-5662165 | Msa1006810:CDS | 35.0% | |
| ! | CATCAAAAGAGAAGCTTTTG+AGG | - | chr7_1:5662212-5662231 | None:intergenic | 35.0% |
| ! | AGCTTCTCTTTTGATGTCAA+TGG | + | chr7_1:5662216-5662235 | Msa1006810:CDS | 35.0% |
| ! | TTCTCTTTTGATGTCAATGG+TGG | + | chr7_1:5662219-5662238 | Msa1006810:CDS | 35.0% |
| TTGATCCTCCTAAATCAATG+TGG | + | chr7_1:5662250-5662269 | Msa1006810:CDS | 35.0% | |
| !!! | GTTGAGTTTTGATTCTTCCT+CGG | - | chr7_1:5662286-5662305 | None:intergenic | 35.0% |
| CATCAGGATCAAAATCAACT+TGG | - | chr7_1:5662308-5662327 | None:intergenic | 35.0% | |
| ATCTTGAGAGAGTTCTTGTA+AGG | - | chr7_1:5662352-5662371 | None:intergenic | 35.0% | |
| ! | GTTTTTGTGGATGTTAAGGT+TGG | + | chr7_1:5662426-5662445 | Msa1006810:CDS | 35.0% |
| TTCTACTTCACAAGCTTAAG+AGG | + | chr7_1:5662468-5662487 | Msa1006810:CDS | 35.0% | |
| TCTACTTCACAAGCTTAAGA+GGG | + | chr7_1:5662469-5662488 | Msa1006810:CDS | 35.0% | |
| !! | AAGTGAGGATGATTTTGAGA+GGG | + | chr7_1:5662520-5662539 | Msa1006810:CDS | 35.0% |
| ! | AATGCATTTAGGATTCAAGG+AGG | + | chr7_1:5662575-5662594 | Msa1006810:CDS | 35.0% |
| !! | GAGCTTTTAGGTGATTTGTA+TGG | + | chr7_1:5662606-5662625 | Msa1006810:CDS | 35.0% |
| !! | CTTTTAGGTGATTTGTATGG+TGG | + | chr7_1:5662609-5662628 | Msa1006810:CDS | 35.0% |
| ! | AGATTGCCAAAGGTTTTTGT+TGG | + | chr7_1:5662636-5662655 | Msa1006810:CDS | 35.0% |
| ! | GTTGGTAAGAATTACATTGG+TGG | + | chr7_1:5662654-5662673 | Msa1006810:CDS | 35.0% |
| TGGAAAGCTTGAGAAATTGT+TGG | + | chr7_1:5662707-5662726 | Msa1006810:CDS | 35.0% | |
| GGAATGTTGTGAGAAAATTG+AGG | + | chr7_1:5662728-5662747 | Msa1006810:CDS | 35.0% | |
| GAGAAAATTGAGGATAGTAG+TGG | + | chr7_1:5662738-5662757 | Msa1006810:CDS | 35.0% | |
| AAAATTGAGGATAGTAGTGG+TGG | + | chr7_1:5662741-5662760 | Msa1006810:CDS | 35.0% | |
| GTGAGAATTGTGGTGATATA+AGG | + | chr7_1:5662766-5662785 | Msa1006810:CDS | 35.0% | |
| !! | GTTCCTTGTGAAACTTGTTT+TGG | + | chr7_1:5662792-5662811 | Msa1006810:CDS | 35.0% |
| CTTCCAAAACAAGTTTCACA+AGG | - | chr7_1:5662798-5662817 | None:intergenic | 35.0% | |
| GAGGAAGAATATGATGATCA+TGG | + | chr7_1:5662852-5662871 | Msa1006810:CDS | 35.0% | |
| TGTCCGGATTGTAATGAAAA+TGG | + | chr7_1:5662906-5662925 | Msa1006810:CDS | 35.0% | |
| !! | ATGTCTACATCGCTTTTGCT+TGG | - | chr7_1:5661680-5661699 | None:intergenic | 40.0% |
| TGTCATCTTCAGATTGAGGT+GGG | - | chr7_1:5661756-5661775 | None:intergenic | 40.0% | |
| TTGATGTGAGTGCAACAACA+TGG | - | chr7_1:5661783-5661802 | None:intergenic | 40.0% | |
| !! | TGGTTTGAGAGTACCTAATG+TGG | - | chr7_1:5661806-5661825 | None:intergenic | 40.0% |
| GGAAAATGAGAAAAGGGAGA+AGG | + | chr7_1:5661969-5661988 | Msa1006810:CDS | 40.0% | |
| !! | TTGATTGTTTCTGGTTCACC+AGG | - | chr7_1:5662132-5662151 | None:intergenic | 40.0% |
| !! | TCCCATGTGTTGATTGTTTC+TGG | - | chr7_1:5662141-5662160 | None:intergenic | 40.0% |
| AACACATGGGAGTTAATGGA+AGG | + | chr7_1:5662150-5662169 | Msa1006810:CDS | 40.0% | |
| !!! | GAGAAGCTTTTGAGGTGATT+CGG | - | chr7_1:5662204-5662223 | None:intergenic | 40.0% |
| ! | TTTGATGTCAATGGTGGTGA+AGG | + | chr7_1:5662225-5662244 | Msa1006810:CDS | 40.0% |
| !! | TGAAGCCACATTGATTTAGG+AGG | - | chr7_1:5662258-5662277 | None:intergenic | 40.0% |
| AATGTGGCTTCAAATTACCG+AGG | + | chr7_1:5662266-5662285 | Msa1006810:CDS | 40.0% | |
| TTTGTGGATGTTAAGGTTGG+TGG | + | chr7_1:5662429-5662448 | Msa1006810:CDS | 40.0% | |
| !! | TAAGGTTGGTGGAAAGGAAA+AGG | + | chr7_1:5662440-5662459 | Msa1006810:CDS | 40.0% |
| CTACTTCACAAGCTTAAGAG+GGG | + | chr7_1:5662470-5662489 | Msa1006810:CDS | 40.0% | |
| ATGAAGATTGTTGCCAAGTG+AGG | + | chr7_1:5662505-5662524 | Msa1006810:CDS | 40.0% | |
| CTCTCAAAATCATCCTCACT+TGG | - | chr7_1:5662521-5662540 | None:intergenic | 40.0% | |
| ! | CAAGTGAGGATGATTTTGAG+AGG | + | chr7_1:5662519-5662538 | Msa1006810:CDS | 40.0% |
| !! | AGGATGATTTTGAGAGGGTT+AGG | + | chr7_1:5662525-5662544 | Msa1006810:CDS | 40.0% |
| ! | TTAGGTGATTTGTATGGTGG+AGG | + | chr7_1:5662612-5662631 | Msa1006810:CDS | 40.0% |
| GAATTACATTGGTGGAGTTG+AGG | + | chr7_1:5662662-5662681 | Msa1006810:CDS | 40.0% | |
| !! | ATGTCTACATCGCTTTTGCT+TGG | - | chr7_1:5661680-5661699 | None:intergenic | 40.0% |
| TGTCATCTTCAGATTGAGGT+GGG | - | chr7_1:5661756-5661775 | None:intergenic | 40.0% | |
| TTGATGTGAGTGCAACAACA+TGG | - | chr7_1:5661783-5661802 | None:intergenic | 40.0% | |
| !! | TGGTTTGAGAGTACCTAATG+TGG | - | chr7_1:5661806-5661825 | None:intergenic | 40.0% |
| GGAAAATGAGAAAAGGGAGA+AGG | + | chr7_1:5661969-5661988 | Msa1006810:CDS | 40.0% | |
| !! | TTGATTGTTTCTGGTTCACC+AGG | - | chr7_1:5662132-5662151 | None:intergenic | 40.0% |
| !! | TCCCATGTGTTGATTGTTTC+TGG | - | chr7_1:5662141-5662160 | None:intergenic | 40.0% |
| AACACATGGGAGTTAATGGA+AGG | + | chr7_1:5662150-5662169 | Msa1006810:CDS | 40.0% | |
| !!! | GAGAAGCTTTTGAGGTGATT+CGG | - | chr7_1:5662204-5662223 | None:intergenic | 40.0% |
| ! | TTTGATGTCAATGGTGGTGA+AGG | + | chr7_1:5662225-5662244 | Msa1006810:CDS | 40.0% |
| !! | TGAAGCCACATTGATTTAGG+AGG | - | chr7_1:5662258-5662277 | None:intergenic | 40.0% |
| AATGTGGCTTCAAATTACCG+AGG | + | chr7_1:5662266-5662285 | Msa1006810:CDS | 40.0% | |
| TTTGTGGATGTTAAGGTTGG+TGG | + | chr7_1:5662429-5662448 | Msa1006810:CDS | 40.0% | |
| !! | TAAGGTTGGTGGAAAGGAAA+AGG | + | chr7_1:5662440-5662459 | Msa1006810:CDS | 40.0% |
| CTACTTCACAAGCTTAAGAG+GGG | + | chr7_1:5662470-5662489 | Msa1006810:CDS | 40.0% | |
| ATGAAGATTGTTGCCAAGTG+AGG | + | chr7_1:5662505-5662524 | Msa1006810:CDS | 40.0% | |
| CTCTCAAAATCATCCTCACT+TGG | - | chr7_1:5662521-5662540 | None:intergenic | 40.0% | |
| ! | CAAGTGAGGATGATTTTGAG+AGG | + | chr7_1:5662519-5662538 | Msa1006810:CDS | 40.0% |
| !! | AGGATGATTTTGAGAGGGTT+AGG | + | chr7_1:5662525-5662544 | Msa1006810:CDS | 40.0% |
| ! | TTAGGTGATTTGTATGGTGG+AGG | + | chr7_1:5662612-5662631 | Msa1006810:CDS | 40.0% |
| GAATTACATTGGTGGAGTTG+AGG | + | chr7_1:5662662-5662681 | Msa1006810:CDS | 40.0% | |
| CTGTCATCTTCAGATTGAGG+TGG | - | chr7_1:5661757-5661776 | None:intergenic | 45.0% | |
| GCACTCACATCAACCACATT+AGG | + | chr7_1:5661790-5661809 | Msa1006810:CDS | 45.0% | |
| GAAAAGGGAGAAGGAGAAGA+AGG | + | chr7_1:5661978-5661997 | Msa1006810:CDS | 45.0% | |
| GGTTGATTGAGGCAAAGACT+TGG | + | chr7_1:5662046-5662065 | Msa1006810:CDS | 45.0% | |
| ! | GGTGTTCTTGTTGGTGTCTT+TGG | - | chr7_1:5662108-5662127 | None:intergenic | 45.0% |
| !! | ATTGTTTCTGGTTCACCAGG+TGG | - | chr7_1:5662129-5662148 | None:intergenic | 45.0% |
| !! | GGATGTTAAGGTTGGTGGAA+AGG | + | chr7_1:5662434-5662453 | Msa1006810:CDS | 45.0% |
| ! | GAGGAGCTAAGAGAGCTTTT+AGG | + | chr7_1:5662594-5662613 | Msa1006810:CDS | 45.0% |
| !! | AGTGGTGGATGTGAGAATTG+TGG | + | chr7_1:5662756-5662775 | Msa1006810:CDS | 45.0% |
| GATGATCATGGTCGTGAAGA+AGG | + | chr7_1:5662864-5662883 | Msa1006810:CDS | 45.0% | |
| GTTTGGATTCCAACGTTGTC+CGG | + | chr7_1:5662890-5662909 | Msa1006810:CDS | 45.0% | |
| CATTACAATCCGGACAACGT+TGG | - | chr7_1:5662902-5662921 | None:intergenic | 45.0% | |
| CTGTCATCTTCAGATTGAGG+TGG | - | chr7_1:5661757-5661776 | None:intergenic | 45.0% | |
| GCACTCACATCAACCACATT+AGG | + | chr7_1:5661790-5661809 | Msa1006810:CDS | 45.0% | |
| GAAAAGGGAGAAGGAGAAGA+AGG | + | chr7_1:5661978-5661997 | Msa1006810:CDS | 45.0% | |
| GGTTGATTGAGGCAAAGACT+TGG | + | chr7_1:5662046-5662065 | Msa1006810:CDS | 45.0% | |
| ! | GGTGTTCTTGTTGGTGTCTT+TGG | - | chr7_1:5662108-5662127 | None:intergenic | 45.0% |
| !! | ATTGTTTCTGGTTCACCAGG+TGG | - | chr7_1:5662129-5662148 | None:intergenic | 45.0% |
| !! | GGATGTTAAGGTTGGTGGAA+AGG | + | chr7_1:5662434-5662453 | Msa1006810:CDS | 45.0% |
| ! | GAGGAGCTAAGAGAGCTTTT+AGG | + | chr7_1:5662594-5662613 | Msa1006810:CDS | 45.0% |
| !! | AGTGGTGGATGTGAGAATTG+TGG | + | chr7_1:5662756-5662775 | Msa1006810:CDS | 45.0% |
| GATGATCATGGTCGTGAAGA+AGG | + | chr7_1:5662864-5662883 | Msa1006810:CDS | 45.0% | |
| GTTTGGATTCCAACGTTGTC+CGG | + | chr7_1:5662890-5662909 | Msa1006810:CDS | 45.0% | |
| CATTACAATCCGGACAACGT+TGG | - | chr7_1:5662902-5662921 | None:intergenic | 45.0% | |
| ACACCAACAAGAACACCACC+TGG | + | chr7_1:5662111-5662130 | Msa1006810:CDS | 50.0% | |
| TCACCAGGTGGTGTTCTTGT+TGG | - | chr7_1:5662117-5662136 | None:intergenic | 50.0% | |
| ! | AGGTGATTCGGCGATCGAAA+AGG | - | chr7_1:5662192-5662211 | None:intergenic | 50.0% |
| TGGTGGAGGAAGATTGCCAA+AGG | + | chr7_1:5662626-5662645 | Msa1006810:CDS | 50.0% | |
| ! | TGAAGATGGTGATGACGACG+AGG | + | chr7_1:5662833-5662852 | Msa1006810:CDS | 50.0% |
| ACACCAACAAGAACACCACC+TGG | + | chr7_1:5662111-5662130 | Msa1006810:CDS | 50.0% | |
| TCACCAGGTGGTGTTCTTGT+TGG | - | chr7_1:5662117-5662136 | None:intergenic | 50.0% | |
| ! | AGGTGATTCGGCGATCGAAA+AGG | - | chr7_1:5662192-5662211 | None:intergenic | 50.0% |
| TGGTGGAGGAAGATTGCCAA+AGG | + | chr7_1:5662626-5662645 | Msa1006810:CDS | 50.0% | |
| ! | TGAAGATGGTGATGACGACG+AGG | + | chr7_1:5662833-5662852 | Msa1006810:CDS | 50.0% |
| GGTCGTGAAGAAGGCGAGTT+TGG | + | chr7_1:5662873-5662892 | Msa1006810:CDS | 55.0% | |
| GGTCGTGAAGAAGGCGAGTT+TGG | + | chr7_1:5662873-5662892 | Msa1006810:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 5661661 | 5662959 | 5661661 | ID=Msa1006810;Name=Msa1006810 |
| chr7_1 | mRNA | 5661661 | 5662959 | 5661661 | ID=Msa1006810-mRNA-1;Parent=Msa1006810;Name=Msa1006810-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|432 |
| chr7_1 | exon | 5661661 | 5662959 | 5661661 | ID=Msa1006810-mRNA-1:exon:1810;Parent=Msa1006810-mRNA-1 |
| chr7_1 | CDS | 5661661 | 5662959 | 5661661 | ID=Msa1006810-mRNA-1:cds;Parent=Msa1006810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
