Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618470 | XP_003629981.1 | 98.104 | 211 | 4 | 0 | 1 | 211 | 1 | 211 | 1.15e-150 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618470 | sp|Q6IDL4|P24D3_ARATH | 67.150 | 207 | 67 | 1 | 6 | 211 | 11 | 217 | 2.10e-105 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0618470 | 0.815343 | 9.706048e-52 | -8.615850e-47 |
| Msa0030160 | Msa0618470 | 0.824036 | 1.003188e-53 | -8.615850e-47 |
| Msa0044000 | Msa0618470 | 0.805290 | 1.433628e-49 | -8.615850e-47 |
| Msa0044330 | Msa0618470 | 0.812206 | 4.763622e-51 | -8.615850e-47 |
| Msa0090570 | Msa0618470 | 0.852331 | 4.951252e-61 | -8.615850e-47 |
| Msa0101270 | Msa0618470 | 0.800506 | 1.395673e-48 | -8.615850e-47 |
| Msa0104230 | Msa0618470 | 0.805452 | 1.326089e-49 | -8.615850e-47 |
| Msa0104240 | Msa0618470 | 0.804939 | 1.697601e-49 | -8.615850e-47 |
| Msa0106620 | Msa0618470 | 0.807364 | 5.241761e-50 | -8.615850e-47 |
| Msa0106710 | Msa0618470 | 0.834556 | 2.798721e-56 | -8.615850e-47 |
| Msa0610840 | Msa0618470 | -0.829638 | 4.601606e-55 | -8.615850e-47 |
| Msa0613340 | Msa0618470 | 0.849034 | 4.189303e-60 | -8.615850e-47 |
| Msa0618410 | Msa0618470 | 0.846647 | 1.905147e-59 | -8.615850e-47 |
| Msa0618470 | Msa0629240 | 0.801038 | 1.087160e-48 | -8.615850e-47 |
| Msa0618470 | Msa0647190 | 0.803523 | 3.347047e-49 | -8.615850e-47 |
| Msa0618470 | Msa0649220 | 0.801126 | 1.042984e-48 | -8.615850e-47 |
| Msa0618470 | Msa0658000 | 0.842549 | 2.415858e-58 | -8.615850e-47 |
| Msa0618470 | Msa0658040 | 0.852695 | 3.898998e-61 | -8.615850e-47 |
| Msa0618470 | Msa0661320 | 0.808251 | 3.394143e-50 | -8.615850e-47 |
| Msa0618470 | Msa0661830 | 0.818230 | 2.184538e-52 | -8.615850e-47 |
| Msa0618470 | Msa0682680 | 0.808099 | 3.657590e-50 | -8.615850e-47 |
| Msa0618470 | Msa0701010 | 0.802696 | 4.963424e-49 | -8.615850e-47 |
| Msa0618470 | Msa0702720 | 0.820427 | 6.900356e-53 | -8.615850e-47 |
| Msa0618470 | Msa0702840 | 0.834931 | 2.253299e-56 | -8.615850e-47 |
| Msa0618470 | Msa0702890 | 0.843480 | 1.365276e-58 | -8.615850e-47 |
| Msa0618470 | Msa0705190 | 0.813209 | 2.874137e-51 | -8.615850e-47 |
| Msa0618470 | Msa0707250 | 0.831047 | 2.082466e-55 | -8.615850e-47 |
| Msa0618470 | Msa0708310 | 0.811895 | 5.567923e-51 | -8.615850e-47 |
| Msa0618470 | Msa0711150 | 0.831369 | 1.735597e-55 | -8.615850e-47 |
| Msa0618470 | Msa0755050 | 0.801375 | 9.276286e-49 | -8.615850e-47 |
| Msa0618470 | Msa0768290 | 0.811687 | 6.179598e-51 | -8.615850e-47 |
| Msa0618470 | Msa0768370 | 0.809981 | 1.446385e-50 | -8.615850e-47 |
| Msa0618470 | Msa0773180 | 0.805397 | 1.361408e-49 | -8.615850e-47 |
| Msa0618470 | Msa0784480 | 0.807506 | 4.889734e-50 | -8.615850e-47 |
| Msa0618470 | Msa0810030 | 0.811318 | 7.432597e-51 | -8.615850e-47 |
| Msa0618470 | Msa0810270 | 0.800563 | 1.359249e-48 | -8.615850e-47 |
| Msa0618470 | Msa0814600 | 0.810589 | 1.069409e-50 | -8.615850e-47 |
| Msa0618470 | Msa0817460 | 0.812414 | 4.290649e-51 | -8.615850e-47 |
| Msa0618470 | Msa0817650 | 0.800584 | 1.345846e-48 | -8.615850e-47 |
| Msa0618470 | Msa0822500 | 0.832244 | 1.055782e-55 | -8.615850e-47 |
| Msa0618470 | Msa0830230 | 0.802142 | 6.455840e-49 | -8.615850e-47 |
| Msa0618470 | Msa0832340 | 0.823652 | 1.233975e-53 | -8.615850e-47 |
| Msa0618470 | Msa0833530 | 0.822487 | 2.307385e-53 | -8.615850e-47 |
| Msa0618470 | Msa0844420 | 0.837148 | 6.168039e-57 | -8.615850e-47 |
| Msa0618470 | Msa0844490 | 0.834223 | 3.394302e-56 | -8.615850e-47 |
| Msa0618470 | Msa0865030 | 0.812938 | 3.295555e-51 | -8.615850e-47 |
| Msa0618470 | Msa0868160 | 0.808477 | 3.038436e-50 | -8.615850e-47 |
| Msa0618470 | Msa0878220 | 0.806974 | 6.337103e-50 | -8.615850e-47 |
| Msa0618470 | Msa0888130 | 0.808604 | 2.854257e-50 | -8.615850e-47 |
| Msa0618470 | Msa0888260 | 0.807202 | 5.671102e-50 | -8.615850e-47 |
| Msa0618470 | Msa0897330 | 0.803182 | 3.937837e-49 | -8.615850e-47 |
| Msa0618470 | Msa0899430 | 0.809287 | 2.038782e-50 | -8.615850e-47 |
| Msa0618470 | Msa0899450 | 0.800417 | 1.455755e-48 | -8.615850e-47 |
| Msa0618470 | Msa0927380 | 0.806997 | 6.268788e-50 | -8.615850e-47 |
| Msa0618470 | Msa0960390 | 0.803751 | 3.001353e-49 | -8.615850e-47 |
| Msa0618470 | Msa0966750 | 0.821176 | 4.639916e-53 | -8.615850e-47 |
| Msa0618470 | Msa0969810 | 0.819732 | 9.953159e-53 | -8.615850e-47 |
| Msa0618470 | Msa0974080 | 0.808789 | 2.605538e-50 | -8.615850e-47 |
| Msa0618470 | Msa1000890 | 0.820785 | 5.708289e-53 | -8.615850e-47 |
| Msa0618470 | Msa1000900 | 0.806941 | 6.439894e-50 | -8.615850e-47 |
| Msa0618470 | Msa1002850 | 0.810597 | 1.064933e-50 | -8.615850e-47 |
| Msa0618470 | Msa1006810 | 0.844397 | 7.752260e-59 | -8.615850e-47 |
| Msa0618470 | Msa1034310 | 0.839472 | 1.552512e-57 | -8.615850e-47 |
| Msa0618470 | Msa1034500 | 0.815013 | 1.148714e-51 | -8.615850e-47 |
| Msa0618470 | Msa1036610 | 0.805571 | 1.251598e-49 | -8.615850e-47 |
| Msa0618470 | Msa1042660 | 0.810899 | 9.163624e-51 | -8.615850e-47 |
| Msa0618470 | Msa1048160 | 0.805729 | 1.159928e-49 | -8.615850e-47 |
| Msa0618470 | Msa1048220 | 0.808190 | 3.498490e-50 | -8.615850e-47 |
| Msa0618470 | Msa1089450 | 0.821793 | 3.342236e-53 | -8.615850e-47 |
| Msa0618470 | Msa1101090 | 0.828276 | 9.838980e-55 | -8.615850e-47 |
| Msa0618470 | Msa1109090 | 0.819338 | 1.223686e-52 | -8.615850e-47 |
| Msa0618470 | Msa1111870 | 0.809343 | 1.982928e-50 | -8.615850e-47 |
| Msa0618470 | Msa1121480 | 0.815988 | 6.972427e-52 | -8.615850e-47 |
| Msa0618470 | Msa1121490 | 0.819427 | 1.168317e-52 | -8.615850e-47 |
| Msa0618470 | Msa1131490 | 0.807869 | 4.094865e-50 | -8.615850e-47 |
| Msa0618470 | Msa1137570 | 0.814386 | 1.582277e-51 | -8.615850e-47 |
| Msa0618470 | Msa1142670 | 0.824651 | 7.191158e-54 | -8.615850e-47 |
| Msa0618470 | Msa1162780 | 0.808765 | 2.636616e-50 | -8.615850e-47 |
| Msa0618470 | Msa1175200 | 0.805508 | 1.290291e-49 | -8.615850e-47 |
| Msa0618470 | Msa1207310 | 0.800959 | 1.128219e-48 | -8.615850e-47 |
| Msa0618470 | Msa1209440 | 0.802309 | 5.965400e-49 | -8.615850e-47 |
| Msa0618470 | Msa1213520 | 0.805017 | 1.635157e-49 | -8.615850e-47 |
| Msa0618470 | Msa1226270 | 0.821845 | 3.251916e-53 | -8.615850e-47 |
| Msa0618470 | Msa1227730 | 0.813795 | 2.135610e-51 | -8.615850e-47 |
| Msa0618470 | Msa1232700 | 0.806440 | 8.216414e-50 | -8.615850e-47 |
| Msa0618470 | Msa1232740 | 0.834487 | 2.912809e-56 | -8.615850e-47 |
| Msa0618470 | Msa1246360 | 0.808948 | 2.409829e-50 | -8.615850e-47 |
| Msa0618470 | Msa1248830 | 0.818943 | 1.505481e-52 | -8.615850e-47 |
| Msa0618470 | Msa1254730 | 0.804320 | 2.285640e-49 | -8.615850e-47 |
| Msa0618470 | Msa1260620 | 0.802089 | 6.619951e-49 | -8.615850e-47 |
| Msa0618470 | Msa1265590 | 0.806657 | 7.395568e-50 | -8.615850e-47 |
| Msa0618470 | Msa1271130 | 0.824201 | 9.175315e-54 | -8.615850e-47 |
| Msa0618470 | Msa1275590 | 0.840768 | 7.127288e-58 | -8.615850e-47 |
| Msa0618470 | Msa1276600 | 0.835074 | 2.073339e-56 | -8.615850e-47 |
| Msa0618470 | Msa1286800 | 0.840211 | 9.965654e-58 | -8.615850e-47 |
| Msa0618470 | Msa1287190 | 0.837081 | 6.414084e-57 | -8.615850e-47 |
| Msa0618470 | Msa1308870 | 0.801904 | 7.225628e-49 | -8.615850e-47 |
| Msa0618470 | Msa1313320 | 0.826852 | 2.161429e-54 | -8.615850e-47 |
| Msa0618470 | Msa1323690 | 0.807091 | 5.985628e-50 | -8.615850e-47 |
| Msa0618470 | Msa1325410 | -0.803477 | 3.421932e-49 | -8.615850e-47 |
| Msa0618470 | Msa1341840 | 0.823983 | 1.032215e-53 | -8.615850e-47 |
| Msa0618470 | Msa1345100 | 0.819384 | 1.194915e-52 | -8.615850e-47 |
| Msa0618470 | Msa1346840 | 0.804526 | 2.070820e-49 | -8.615850e-47 |
| Msa0618470 | Msa1353460 | 0.826512 | 2.604658e-54 | -8.615850e-47 |
| Msa0618470 | Msa1353470 | 0.806399 | 8.382376e-50 | -8.615850e-47 |
| Msa0618470 | Msa1353890 | 0.800354 | 1.499063e-48 | -8.615850e-47 |
| Msa0618470 | Msa1358670 | 0.810368 | 1.193697e-50 | -8.615850e-47 |
| Msa0618470 | Msa1380220 | 0.817446 | 3.284565e-52 | -8.615850e-47 |
| Msa0618470 | Msa1412530 | 0.842012 | 3.351793e-58 | -8.615850e-47 |
| Msa0618470 | Msa1412540 | 0.810103 | 1.361151e-50 | -8.615850e-47 |
| Msa0618470 | Msa1418240 | 0.825661 | 4.150677e-54 | -8.615850e-47 |
| Msa0618470 | Msa1428780 | 0.808302 | 3.310833e-50 | -8.615850e-47 |
| Msa0618470 | Msa1440310 | 0.811146 | 8.101885e-51 | -8.615850e-47 |
| Msa0618470 | Msa1442920 | 0.835024 | 2.134818e-56 | -8.615850e-47 |
| Msa0618470 | Msa1447180 | 0.800853 | 1.185776e-48 | -8.615850e-47 |
| Msa0618470 | Msa1452710 | 0.856142 | 3.928093e-62 | -8.615850e-47 |
| Msa0618470 | Msa1454570 | 0.818501 | 1.896820e-52 | -8.615850e-47 |
| Msa0618470 | Msa1457160 | 0.809737 | 1.632145e-50 | -8.615850e-47 |
| Msa0618470 | Msa1458680 | 0.821705 | 3.502920e-53 | -8.615850e-47 |
| Msa0618470 | Msa1460320 | -0.804444 | 2.153827e-49 | -8.615850e-47 |
| Msa0125650 | Msa0618470 | 0.803711 | 3.059175e-49 | -8.615850e-47 |
| Msa0127800 | Msa0618470 | 0.839603 | 1.435235e-57 | -8.615850e-47 |
| Msa0138020 | Msa0618470 | 0.800054 | 1.725587e-48 | -8.615850e-47 |
| Msa0160960 | Msa0618470 | 0.814594 | 1.422618e-51 | -8.615850e-47 |
| Msa0167980 | Msa0618470 | 0.818843 | 1.585934e-52 | -8.615850e-47 |
| Msa0180500 | Msa0618470 | 0.803706 | 3.067619e-49 | -8.615850e-47 |
| Msa0183850 | Msa0618470 | 0.846511 | 2.074291e-59 | -8.615850e-47 |
| Msa0187830 | Msa0618470 | 0.802583 | 5.237857e-49 | -8.615850e-47 |
| Msa0188350 | Msa0618470 | 0.804288 | 2.321818e-49 | -8.615850e-47 |
| Msa0189040 | Msa0618470 | 0.820511 | 6.599450e-53 | -8.615850e-47 |
| Msa0204960 | Msa0618470 | 0.842905 | 1.942902e-58 | -8.615850e-47 |
| Msa0206690 | Msa0618470 | 0.815476 | 9.067231e-52 | -8.615850e-47 |
| Msa0207040 | Msa0618470 | -0.807800 | 4.235051e-50 | -8.615850e-47 |
| Msa0207350 | Msa0618470 | 0.818340 | 2.063373e-52 | -8.615850e-47 |
| Msa0211150 | Msa0618470 | 0.805160 | 1.526785e-49 | -8.615850e-47 |
| Msa0214550 | Msa0618470 | 0.825137 | 5.521765e-54 | -8.615850e-47 |
| Msa0217700 | Msa0618470 | 0.826470 | 2.665900e-54 | -8.615850e-47 |
| Msa0219590 | Msa0618470 | 0.804502 | 2.094751e-49 | -8.615850e-47 |
| Msa0231060 | Msa0618470 | 0.824042 | 9.999265e-54 | -8.615850e-47 |
| Msa0236510 | Msa0618470 | -0.808948 | 2.409829e-50 | -8.615850e-47 |
| Msa0237420 | Msa0618470 | 0.806139 | 9.508306e-50 | -8.615850e-47 |
| Msa0367870 | Msa0618470 | 0.818970 | 1.484343e-52 | -8.615850e-47 |
| Msa0389210 | Msa0618470 | 0.827485 | 1.524673e-54 | -8.615850e-47 |
| Msa0394120 | Msa0618470 | 0.803413 | 3.527787e-49 | -8.615850e-47 |
| Msa0402790 | Msa0618470 | 0.808534 | 2.954969e-50 | -8.615850e-47 |
| Msa0403770 | Msa0618470 | 0.805486 | 1.304495e-49 | -8.615850e-47 |
| Msa0408770 | Msa0618470 | 0.800644 | 1.308116e-48 | -8.615850e-47 |
| Msa0413410 | Msa0618470 | 0.802183 | 6.329645e-49 | -8.615850e-47 |
| Msa0417330 | Msa0618470 | 0.800877 | 1.172508e-48 | -8.615850e-47 |
| Msa0432160 | Msa0618470 | 0.806495 | 8.003133e-50 | -8.615850e-47 |
| Msa0435690 | Msa0618470 | 0.804664 | 1.938424e-49 | -8.615850e-47 |
| Msa0438600 | Msa0618470 | 0.814812 | 1.272976e-51 | -8.615850e-47 |
| Msa0450400 | Msa0618470 | -0.854455 | 1.217313e-61 | -8.615850e-47 |
| Msa0467100 | Msa0618470 | 0.809653 | 1.701345e-50 | -8.615850e-47 |
| Msa0468410 | Msa0618470 | 0.803080 | 4.135441e-49 | -8.615850e-47 |
| Msa0469620 | Msa0618470 | -0.814160 | 1.775068e-51 | -8.615850e-47 |
| Msa0476680 | Msa0618470 | 0.808427 | 3.114582e-50 | -8.615850e-47 |
| Msa0240900 | Msa0618470 | 0.817403 | 3.358548e-52 | -8.615850e-47 |
| Msa0241140 | Msa0618470 | 0.823702 | 1.201154e-53 | -8.615850e-47 |
| Msa0249580 | Msa0618470 | 0.825715 | 4.030543e-54 | -8.615850e-47 |
| Msa0257490 | Msa0618470 | 0.821079 | 4.885381e-53 | -8.615850e-47 |
| Msa0257520 | Msa0618470 | 0.822196 | 2.695325e-53 | -8.615850e-47 |
| Msa0259210 | Msa0618470 | 0.800796 | 1.218340e-48 | -8.615850e-47 |
| Msa0267790 | Msa0618470 | 0.806118 | 9.607541e-50 | -8.615850e-47 |
| Msa0271770 | Msa0618470 | 0.842587 | 2.361538e-58 | -8.615850e-47 |
| Msa0275020 | Msa0618470 | 0.830204 | 3.350175e-55 | -8.615850e-47 |
| Msa0278580 | Msa0618470 | 0.803220 | 3.867805e-49 | -8.615850e-47 |
| Msa0279850 | Msa0618470 | 0.807052 | 6.100613e-50 | -8.615850e-47 |
| Msa0281530 | Msa0618470 | 0.818832 | 1.595365e-52 | -8.615850e-47 |
| Msa0283420 | Msa0618470 | 0.808940 | 2.418819e-50 | -8.615850e-47 |
| Msa0287870 | Msa0618470 | 0.824122 | 9.577579e-54 | -8.615850e-47 |
| Msa0288080 | Msa0618470 | 0.842446 | 2.573679e-58 | -8.615850e-47 |
| Msa0295460 | Msa0618470 | -0.810413 | 1.167248e-50 | -8.615850e-47 |
| Msa0296480 | Msa0618470 | 0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0296820 | Msa0618470 | 0.849651 | 2.820029e-60 | -8.615850e-47 |
| Msa0315940 | Msa0618470 | 0.830624 | 2.644628e-55 | -8.615850e-47 |
| Msa0317940 | Msa0618470 | 0.809998 | 1.433839e-50 | -8.615850e-47 |
| Msa0317970 | Msa0618470 | 0.839831 | 1.252190e-57 | -8.615850e-47 |
| Msa0322900 | Msa0618470 | 0.809001 | 2.347817e-50 | -8.615850e-47 |
| Msa0325830 | Msa0618470 | 0.803177 | 3.948086e-49 | -8.615850e-47 |
| Msa0326480 | Msa0618470 | 0.848102 | 7.590606e-60 | -8.615850e-47 |
| Msa0336320 | Msa0618470 | 0.802184 | 6.326567e-49 | -8.615850e-47 |
| Msa0343850 | Msa0618470 | 0.807708 | 4.429050e-50 | -8.615850e-47 |
| Msa0357900 | Msa0618470 | 0.839138 | 1.895143e-57 | -8.615850e-47 |
| Msa0361330 | Msa0618470 | 0.807013 | 6.218851e-50 | -8.615850e-47 |
| Msa0363790 | Msa0618470 | 0.801814 | 7.537721e-49 | -8.615850e-47 |
| Msa0485240 | Msa0618470 | 0.825736 | 3.982879e-54 | -8.615850e-47 |
| Msa0501720 | Msa0618470 | 0.806047 | 9.942585e-50 | -8.615850e-47 |
| Msa0510930 | Msa0618470 | 0.804237 | 2.379301e-49 | -8.615850e-47 |
| Msa0518380 | Msa0618470 | 0.806488 | 8.027649e-50 | -8.615850e-47 |
| Msa0521010 | Msa0618470 | 0.813165 | 2.939094e-51 | -8.615850e-47 |
| Msa0521670 | Msa0618470 | 0.806497 | 7.993347e-50 | -8.615850e-47 |
| Msa0529350 | Msa0618470 | 0.817471 | 3.242161e-52 | -8.615850e-47 |
| Msa0532980 | Msa0618470 | 0.808161 | 3.548555e-50 | -8.615850e-47 |
| Msa0532990 | Msa0618470 | 0.825818 | 3.808659e-54 | -8.615850e-47 |
| Msa0542290 | Msa0618470 | 0.820562 | 6.422789e-53 | -8.615850e-47 |
| Msa0549890 | Msa0618470 | 0.817558 | 3.098781e-52 | -8.615850e-47 |
| Msa0574390 | Msa0618470 | 0.811916 | 5.509171e-51 | -8.615850e-47 |
| Msa0574600 | Msa0618470 | 0.804002 | 2.661816e-49 | -8.615850e-47 |
| Msa0574730 | Msa0618470 | 0.809661 | 1.694773e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618470 | MtrunA17_Chr8g0380801 | 98.104 | 211 | 4 | 0 | 1 | 211 | 1 | 211 | 1.05e-154 | 427 |
| Msa0618470 | MtrunA17_Chr2g0277981 | 72.642 | 212 | 51 | 3 | 1 | 211 | 1 | 206 | 5.29e-111 | 316 |
| Msa0618470 | MtrunA17_Chr3g0114751 | 65.877 | 211 | 68 | 2 | 3 | 211 | 9 | 217 | 8.07e-101 | 291 |
| Msa0618470 | MtrunA17_Chr5g0423921 | 70.213 | 188 | 53 | 2 | 24 | 211 | 28 | 212 | 2.28e-93 | 271 |
| Msa0618470 | MtrunA17_Chr8g0380821 | 98.198 | 111 | 2 | 0 | 101 | 211 | 2 | 112 | 5.77e-75 | 221 |
| Msa0618470 | MtrunA17_Chr4g0042721 | 41.919 | 198 | 102 | 3 | 22 | 211 | 24 | 216 | 5.91e-55 | 174 |
| Msa0618470 | MtrunA17_Chr6g0453521 | 40.306 | 196 | 105 | 2 | 24 | 211 | 21 | 212 | 5.31e-53 | 169 |
| Msa0618470 | MtrunA17_Chr5g0417891 | 34.579 | 214 | 126 | 4 | 8 | 211 | 10 | 219 | 2.12e-42 | 142 |
| Msa0618470 | MtrunA17_Chr7g0217911 | 43.448 | 145 | 81 | 1 | 67 | 211 | 5 | 148 | 7.35e-41 | 136 |
| Msa0618470 | MtrunA17_Chr5g0417901 | 32.524 | 206 | 134 | 4 | 8 | 211 | 12 | 214 | 3.04e-33 | 119 |
| Msa0618470 | MtrunA17_Chr5g0417931 | 33.023 | 215 | 129 | 5 | 8 | 211 | 13 | 223 | 2.35e-31 | 114 |
| Msa0618470 | MtrunA17_Chr1g0204631 | 26.486 | 185 | 127 | 4 | 27 | 207 | 27 | 206 | 1.60e-13 | 66.6 |
| Msa0618470 | MtrunA17_Chr7g0260361 | 27.397 | 146 | 101 | 2 | 62 | 207 | 12 | 152 | 1.12e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618470 | AT1G09580.1 | 67.150 | 207 | 67 | 1 | 6 | 211 | 11 | 217 | 2.14e-106 | 305 |
| Msa0618470 | AT1G57620.1 | 65.714 | 210 | 72 | 0 | 2 | 211 | 3 | 212 | 3.42e-104 | 299 |
| Msa0618470 | AT1G21900.1 | 70.157 | 191 | 53 | 3 | 24 | 211 | 27 | 216 | 2.97e-94 | 274 |
| Msa0618470 | AT3G10780.1 | 55.000 | 200 | 84 | 3 | 17 | 211 | 19 | 217 | 2.33e-69 | 211 |
| Msa0618470 | AT1G14010.1 | 42.857 | 210 | 112 | 5 | 7 | 211 | 6 | 212 | 2.24e-52 | 168 |
| Msa0618470 | AT1G26690.1 | 39.713 | 209 | 115 | 5 | 8 | 211 | 12 | 214 | 2.96e-52 | 167 |
| Msa0618470 | AT1G69460.1 | 37.900 | 219 | 117 | 5 | 2 | 211 | 6 | 214 | 2.90e-48 | 157 |
| Msa0618470 | AT2G03290.1 | 38.384 | 198 | 114 | 3 | 20 | 211 | 18 | 213 | 8.61e-48 | 156 |
| Msa0618470 | AT3G29070.1 | 39.583 | 192 | 111 | 4 | 24 | 211 | 35 | 225 | 1.77e-44 | 148 |
| Msa0618470 | AT2G03040.1 | 35.762 | 151 | 89 | 4 | 20 | 164 | 18 | 166 | 4.55e-28 | 104 |
Find 65 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAACGACGACGTTATTC+TGG | 0.202384 | 4_2:+69447770 | None:intergenic |
| TTCACACAGAATTCAGAATT+TGG | 0.212037 | 4_2:+69447959 | None:intergenic |
| GGAACTACCTGGCATGCTTT+TGG | 0.252996 | 4_2:-69446685 | Msa0618470:CDS |
| CCAGAATAACGTCGTCGTTT+TGG | 0.269487 | 4_2:-69447770 | Msa0618470:CDS |
| GTGAACCTTGACTGGAAAAT+TGG | 0.288089 | 4_2:-69446626 | Msa0618470:CDS |
| TACCTTCCACACTCGCTATC+TGG | 0.307658 | 4_2:-69447837 | Msa0618470:CDS |
| TTTAGAGAGAGAAGGGGCTA+TGG | 0.349116 | 4_2:-69447911 | Msa0618470:exon |
| TCAGAAGAAGAAGCTTATAT+AGG | 0.352870 | 4_2:-69445643 | Msa0618470:exon |
| TATTTATAAACAAGATGATA+TGG | 0.359079 | 4_2:-69442239 | Msa0618470:three_prime_UTR |
| TGGTTGATTGATTGGTAGCT+AGG | 0.397666 | 4_2:+69447994 | None:intergenic |
| AATTCAGAATTTGGATCTGT+TGG | 0.402588 | 4_2:+69447968 | None:intergenic |
| TTGGAATTGCAGCCAAGGAT+TGG | 0.404517 | 4_2:-69446607 | Msa0618470:CDS |
| GATTTCTTCGGAGACGCATT+TGG | 0.406641 | 4_2:+69447792 | None:intergenic |
| TGGAATTGCAGCCAAGGATT+GGG | 0.419986 | 4_2:-69446606 | Msa0618470:CDS |
| GTTGGGTATGGTTGATTGAT+TGG | 0.420425 | 4_2:+69447986 | None:intergenic |
| CTTGAGCTGAGAAAGCTAGA+AGG | 0.424644 | 4_2:-69445940 | Msa0618470:CDS |
| GACGCATTTGGTACCGGTGG+TGG | 0.436098 | 4_2:+69447804 | None:intergenic |
| TTCGGAGACGCATTTGGTAC+CGG | 0.451076 | 4_2:+69447798 | None:intergenic |
| ATTCAGAATTTGGATCTGTT+GGG | 0.457594 | 4_2:+69447969 | None:intergenic |
| TGGTTTAGTATTATGTCGTT+AGG | 0.458318 | 4_2:-69445717 | Msa0618470:CDS |
| TGAAAATTTGCTCTATCTGA+AGG | 0.460174 | 4_2:-69445899 | Msa0618470:CDS |
| CTTTAGGTAACATCACCATA+TGG | 0.460528 | 4_2:-69446773 | Msa0618470:intron |
| AGGTTAGTGTGAACCTTGAC+TGG | 0.462981 | 4_2:-69446634 | Msa0618470:CDS |
| GAATTTGGATCTGTTGGGTA+TGG | 0.463938 | 4_2:+69447974 | None:intergenic |
| GAGTCTCAGCTTTGCAATTG+TGG | 0.475357 | 4_2:-69445683 | Msa0618470:CDS |
| TTGGGACTCAGTTGCTAAGA+AGG | 0.475920 | 4_2:-69446588 | Msa0618470:CDS |
| GACGTTATTCTGGATTTCTT+CGG | 0.476995 | 4_2:+69447780 | None:intergenic |
| TGATGAAGATTGTTTCCATA+TGG | 0.488589 | 4_2:+69446758 | None:intergenic |
| AGCAACTGAGTCCCAATCCT+TGG | 0.491833 | 4_2:+69446595 | None:intergenic |
| GGACTACGGGTATGATCATC+GGG | 0.494222 | 4_2:+69447730 | None:intergenic |
| GCATTTACGACTCAAGAGAC+TGG | 0.507558 | 4_2:-69446707 | Msa0618470:CDS |
| TGACAGCGAGAGTGGGACTA+CGG | 0.514356 | 4_2:+69447716 | None:intergenic |
| CATCTACCCAAAAGCATGCC+AGG | 0.519642 | 4_2:+69446678 | None:intergenic |
| AAAATTGGAAACTCTGTAAG+TGG | 0.524529 | 4_2:+69442315 | None:intergenic |
| CATTACCTTGACAGCGAGAG+TGG | 0.529347 | 4_2:+69447708 | None:intergenic |
| CACAAAGAGAACACAACACA+TGG | 0.530469 | 4_2:-69446737 | Msa0618470:CDS |
| AAAGCTAGAAGGAGCTGTAG+AGG | 0.537093 | 4_2:-69445929 | Msa0618470:CDS |
| AGCCAGATAGCGAGTGTGGA+AGG | 0.543450 | 4_2:+69447835 | None:intergenic |
| GCGTGTGTTTAGAGAGAGAA+GGG | 0.546751 | 4_2:-69447918 | Msa0618470:five_prime_UTR |
| GGGACTACGGGTATGATCAT+CGG | 0.549429 | 4_2:+69447729 | None:intergenic |
| ATTTGCTCTATCTGAAGGGA+AGG | 0.554587 | 4_2:-69445894 | Msa0618470:intron |
| GAAAATTGGAATTGCAGCCA+AGG | 0.558923 | 4_2:-69446612 | Msa0618470:CDS |
| CGTAAGCCAGATAGCGAGTG+TGG | 0.559231 | 4_2:+69447831 | None:intergenic |
| GATTGATTGAGAAGATGCAG+AGG | 0.562203 | 4_2:+69447863 | None:intergenic |
| TCTGGCTGGTACTTGTAAGT+AGG | 0.563061 | 4_2:+69442350 | None:intergenic |
| TCAAGAGACTGGGAACTACC+TGG | 0.566601 | 4_2:-69446696 | Msa0618470:CDS |
| GAAAATTTGCTCTATCTGAA+GGG | 0.566763 | 4_2:-69445898 | Msa0618470:CDS |
| CATTTACGACTCAAGAGACT+GGG | 0.567095 | 4_2:-69446706 | Msa0618470:CDS |
| GACAGCGAGAGTGGGACTAC+GGG | 0.568049 | 4_2:+69447717 | None:intergenic |
| TAGTCCCACTCTCGCTGTCA+AGG | 0.570992 | 4_2:-69447713 | Msa0618470:intron |
| ATCGTGAGTGAAAGAACAAA+CGG | 0.572432 | 4_2:-69445750 | Msa0618470:CDS |
| TGCGTGTGTTTAGAGAGAGA+AGG | 0.586449 | 4_2:-69447919 | Msa0618470:five_prime_UTR |
| ACGCATTTGGTACCGGTGGT+GGG | 0.588544 | 4_2:+69447805 | None:intergenic |
| TGGCTTACGTTACCCACCAC+CGG | 0.590818 | 4_2:-69447817 | Msa0618470:CDS |
| TGCTAAGAAGGAGAAGATTG+AGG | 0.593000 | 4_2:-69446576 | Msa0618470:intron |
| GAACAAACGGCAGAGTGGCA+TGG | 0.610011 | 4_2:-69445737 | Msa0618470:CDS |
| TGTTCAGGGAAGCAGAGATG+AGG | 0.614511 | 4_2:-69445773 | Msa0618470:intron |
| ATGTCGTTAGGTATCTGCAT+TGG | 0.618449 | 4_2:-69445705 | Msa0618470:CDS |
| AAATGCATTATAATAAACAT+CGG | 0.622990 | 4_2:+69442283 | None:intergenic |
| ATTACCTTGACAGCGAGAGT+GGG | 0.651605 | 4_2:+69447709 | None:intergenic |
| GGAGACGCATTTGGTACCGG+TGG | 0.661357 | 4_2:+69447801 | None:intergenic |
| GGGTAATCAAGGAGGTCACG+AGG | 0.668890 | 4_2:-69446654 | Msa0618470:CDS |
| TGAAAGAACAAACGGCAGAG+TGG | 0.682661 | 4_2:-69445742 | Msa0618470:CDS |
| CGTGTGTTTAGAGAGAGAAG+GGG | 0.712848 | 4_2:-69447917 | Msa0618470:five_prime_UTR |
| ACAAAGAGAACACAACACAT+GGG | 0.726810 | 4_2:-69446736 | Msa0618470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATAAAATGTAATCTTTT+GGG | - | chr4_2:69443769-69443788 | Msa0618470:intron | 10.0% |
| !!! | ATAAGTATATTTTTAAGATT+TGG | + | chr4_2:69444698-69444717 | None:intergenic | 10.0% |
| !! | AAATTATTCATTTGAAAAAA+TGG | + | chr4_2:69444995-69445014 | None:intergenic | 10.0% |
| !! | AAAAAGAAAATCAAATTTAA+AGG | - | chr4_2:69446475-69446494 | Msa0618470:intron | 10.0% |
| !!! | AAGTATATTTTATATTTGTT+GGG | + | chr4_2:69446629-69446648 | None:intergenic | 10.0% |
| !!! | AAAGTATATTTTATATTTGT+TGG | + | chr4_2:69446630-69446649 | None:intergenic | 10.0% |
| !!! | ATTTTTTGAAATTCAATTAT+TGG | - | chr4_2:69447466-69447485 | Msa0618470:intron | 10.0% |
| !!! | CATTATAAAATGTAATCTTT+TGG | - | chr4_2:69443768-69443787 | Msa0618470:intron | 15.0% |
| !! | ATGAAAAAATATGAAACTAT+TGG | + | chr4_2:69444787-69444806 | None:intergenic | 15.0% |
| !! | ATATTATAAAAAAAATAGCC+TGG | - | chr4_2:69445307-69445326 | Msa0618470:intron | 15.0% |
| !!! | TCTTTTTTATATATCTATTG+AGG | + | chr4_2:69445950-69445969 | None:intergenic | 15.0% |
| !!! | ATAAAATACAATATCTTTTC+AGG | + | chr4_2:69446312-69446331 | None:intergenic | 15.0% |
| !! | AATTCATTATGTATACAAAT+TGG | + | chr4_2:69447021-69447040 | None:intergenic | 15.0% |
| !! | AAATGCATTATAATAAACAT+CGG | + | chr4_2:69447900-69447919 | None:intergenic | 15.0% |
| !! | TATTTATAAACAAGATGATA+TGG | - | chr4_2:69447941-69447960 | Msa0618470:five_prime_UTR | 15.0% |
| !! | AATTGACGTAATTAGTAATA+TGG | - | chr4_2:69442703-69442722 | Msa0618470:intron | 20.0% |
| !! | ATCCAAAAACAAAACAAAAT+AGG | + | chr4_2:69442961-69442980 | None:intergenic | 20.0% |
| !!! | CATTGTTATATGTCTATTTT+TGG | - | chr4_2:69443005-69443024 | Msa0618470:intron | 20.0% |
| !!! | CTGATAACAATTTGTTAAAA+TGG | - | chr4_2:69443364-69443383 | Msa0618470:intron | 20.0% |
| !!! | TAACTTGTAATGTTTTCTTT+AGG | - | chr4_2:69443391-69443410 | Msa0618470:intron | 20.0% |
| !!! | TTGGAAAATATTTCTGTTTA+GGG | - | chr4_2:69443908-69443927 | Msa0618470:intron | 20.0% |
| !! | AGAGATATAGATTTAAATTC+AGG | + | chr4_2:69444145-69444164 | None:intergenic | 20.0% |
| !! | TACAATGTAAAAAAAAAGTG+TGG | - | chr4_2:69444748-69444767 | Msa0618470:intron | 20.0% |
| !!! | AATATGAAACTATTGGTTAA+GGG | + | chr4_2:69444780-69444799 | None:intergenic | 20.0% |
| !!! | AAATATGAAACTATTGGTTA+AGG | + | chr4_2:69444781-69444800 | None:intergenic | 20.0% |
| !! | TGTGTAAAACTATAATCTAT+TGG | + | chr4_2:69445116-69445135 | None:intergenic | 20.0% |
| !!! | TAGTTTTACACAACAAAATA+TGG | - | chr4_2:69445124-69445143 | Msa0618470:intron | 20.0% |
| !!! | TTTTTTGTTCAACAAATTAG+AGG | - | chr4_2:69445173-69445192 | Msa0618470:intron | 20.0% |
| !!! | TTTTGTTGATGTTTTCATTT+TGG | + | chr4_2:69445902-69445921 | None:intergenic | 20.0% |
| !! | AAAGAAGTTTAATGCAATAA+AGG | - | chr4_2:69445965-69445984 | Msa0618470:intron | 20.0% |
| !! | TAGATGTAAGTATTAACATT+TGG | - | chr4_2:69446037-69446056 | Msa0618470:intron | 20.0% |
| !! | TTAGTAAAATACTTTGTTGA+TGG | - | chr4_2:69446114-69446133 | Msa0618470:intron | 20.0% |
| !! | AAAGCGTAATTAATAATCAA+TGG | + | chr4_2:69446154-69446173 | None:intergenic | 20.0% |
| !! | CTATTACTAAATTGAGATAA+AGG | - | chr4_2:69446337-69446356 | Msa0618470:intron | 20.0% |
| !!! | TAATAGTGTGATTTTCTTTT+TGG | + | chr4_2:69446378-69446397 | None:intergenic | 20.0% |
| !! | TTCATTAAGAACTAGATTAT+AGG | + | chr4_2:69446457-69446476 | None:intergenic | 20.0% |
| !! | ATTTATGAGTTGTTATAGAT+TGG | + | chr4_2:69446772-69446791 | None:intergenic | 20.0% |
| !! | ATCAGAAACATAATTTAGAA+AGG | - | chr4_2:69446937-69446956 | Msa0618470:intron | 20.0% |
| !! | ATCAGAAACATAATTTAGAA+AGG | - | chr4_2:69446937-69446956 | Msa0618470:intron | 20.0% |
| !! | GAATTTCAAAAAATGATGTT+AGG | + | chr4_2:69447460-69447479 | None:intergenic | 20.0% |
| !! | AAACTTAACAAATAGAAAGA+GGG | - | chr4_2:69447650-69447669 | Msa0618470:intron | 20.0% |
| ! | CCACGAAATTAAAATGAAAA+GGG | + | chr4_2:69442519-69442538 | None:intergenic | 25.0% |
| !!! | CCTTTTCATTTTAATTTCGT+GGG | - | chr4_2:69442517-69442536 | Msa0618470:intron | 25.0% |
| !!! | ATTTGTTGATGATCACAAAA+TGG | - | chr4_2:69442777-69442796 | Msa0618470:intron | 25.0% |
| ! | GTTGATCAACAAAAGAAATT+AGG | + | chr4_2:69442869-69442888 | None:intergenic | 25.0% |
| !!! | GACCTATTTTGTTTTGTTTT+TGG | - | chr4_2:69442956-69442975 | Msa0618470:intron | 25.0% |
| ! | TTTGGATATATTAATCGATG+AGG | - | chr4_2:69442974-69442993 | Msa0618470:intron | 25.0% |
| ! | TTGGATATATTAATCGATGA+GGG | - | chr4_2:69442975-69442994 | Msa0618470:intron | 25.0% |
| ! | ACAGAGTAAAGATCAATTTA+TGG | + | chr4_2:69443072-69443091 | None:intergenic | 25.0% |
| !!! | GTTCTTTTGATTGTAGAAAA+TGG | - | chr4_2:69443145-69443164 | Msa0618470:intron | 25.0% |
| ! | TTCAAATGAAAATGTCATAG+TGG | - | chr4_2:69443323-69443342 | Msa0618470:intron | 25.0% |
| ! | ATTAATTGTCAGCTATTGAA+AGG | + | chr4_2:69443656-69443675 | None:intergenic | 25.0% |
| !!! | GTTCAAGCATTGTTTTAAAA+TGG | - | chr4_2:69443709-69443728 | Msa0618470:intron | 25.0% |
| ! | AAGTATGAAAGAATCCAAAT+CGG | + | chr4_2:69443813-69443832 | None:intergenic | 25.0% |
| !! | GTTGGAAAATATTTCTGTTT+AGG | - | chr4_2:69443907-69443926 | Msa0618470:intron | 25.0% |
| ! | ATGAATAATTGATTATGCTG+AGG | - | chr4_2:69444018-69444037 | Msa0618470:intron | 25.0% |
| ! | TATAGATTTAAATTCAGGTG+CGG | + | chr4_2:69444140-69444159 | None:intergenic | 25.0% |
| ! | GTATCAATCACATATAGAAA+CGG | + | chr4_2:69444207-69444226 | None:intergenic | 25.0% |
| ! | AAAATTATTCTCTCCTATGA+AGG | - | chr4_2:69444659-69444678 | Msa0618470:intron | 25.0% |
| ! | TACTTATTAGATACCTTCAT+AGG | + | chr4_2:69444675-69444694 | None:intergenic | 25.0% |
| !! | ATATGAAACTATTGGTTAAG+GGG | + | chr4_2:69444779-69444798 | None:intergenic | 25.0% |
| !! | TTTTGGATGTCTATATTTGT+TGG | + | chr4_2:69444816-69444835 | None:intergenic | 25.0% |
| ! | ATCCAAAAGTAAACAACTTA+TGG | - | chr4_2:69444828-69444847 | Msa0618470:intron | 25.0% |
| ! | TTGTTGAACAAAAAAATAGC+TGG | + | chr4_2:69445168-69445187 | None:intergenic | 25.0% |
| ! | TCACCAACAACTATAATATA+TGG | - | chr4_2:69445371-69445390 | Msa0618470:intron | 25.0% |
| ! | TTGCCATATATTATAGTTGT+TGG | + | chr4_2:69445377-69445396 | None:intergenic | 25.0% |
| ! | GCACATGTTATAAAAATTCA+AGG | + | chr4_2:69445422-69445441 | None:intergenic | 25.0% |
| ! | CAATAATATCGAATCAACAA+AGG | + | chr4_2:69445569-69445588 | None:intergenic | 25.0% |
| ! | AAAAGAACGAAACATACAAA+AGG | - | chr4_2:69445651-69445670 | Msa0618470:CDS | 25.0% |
| ! | GTAATTAATAATCAATGGCA+CGG | + | chr4_2:69446149-69446168 | None:intergenic | 25.0% |
| ! | GCAAAGATATGATTAATTGA+TGG | + | chr4_2:69446184-69446203 | None:intergenic | 25.0% |
| ! | ACAATAAATCCACACAAATT+AGG | - | chr4_2:69446422-69446441 | Msa0618470:intron | 25.0% |
| ! | AAATAGTGAATAAATGGAAG+AGG | - | chr4_2:69446583-69446602 | Msa0618470:CDS | 25.0% |
| ! | TCATTATGTATACAAATTGG+AGG | + | chr4_2:69447018-69447037 | None:intergenic | 25.0% |
| ! | TAACCTTAACTCTATGATTA+TGG | + | chr4_2:69447097-69447116 | None:intergenic | 25.0% |
| ! | TAAGGTTAAGAAATTTAGCT+TGG | - | chr4_2:69447109-69447128 | Msa0618470:intron | 25.0% |
| !! | TTGAATTTCAAATTTTGCCT+TGG | + | chr4_2:69447632-69447651 | None:intergenic | 25.0% |
| ! | CAAACTTAACAAATAGAAAG+AGG | - | chr4_2:69447649-69447668 | Msa0618470:intron | 25.0% |
| !!! | AGAAAGAGGGAATTTTTTTT+AGG | - | chr4_2:69447663-69447682 | Msa0618470:intron | 25.0% |
| !!! | GAAAGAGGGAATTTTTTTTA+GGG | - | chr4_2:69447664-69447683 | Msa0618470:intron | 25.0% |
| ! | AATTAATGCAGTAGAAATAG+AGG | - | chr4_2:69447701-69447720 | Msa0618470:intron | 25.0% |
| ! | ATTAATGCAGTAGAAATAGA+GGG | - | chr4_2:69447702-69447721 | Msa0618470:intron | 25.0% |
| ! | AGAAATAGAGGGAAAATATT+AGG | - | chr4_2:69447713-69447732 | Msa0618470:intron | 25.0% |
| ! | ACTTACTCTTAAAGCTTATT+AGG | + | chr4_2:69447755-69447774 | None:intergenic | 25.0% |
| ! | AAGTGGTAACAAAAAAATTC+TGG | + | chr4_2:69447851-69447870 | None:intergenic | 25.0% |
| ATTCAGAATTTGGATCTGTT+GGG | + | chr4_2:69442214-69442233 | None:intergenic | 30.0% | |
| AATTCAGAATTTGGATCTGT+TGG | + | chr4_2:69442215-69442234 | None:intergenic | 30.0% | |
| TTCACACAGAATTCAGAATT+TGG | + | chr4_2:69442224-69442243 | None:intergenic | 30.0% | |
| !!! | CCCTTTTCATTTTAATTTCG+TGG | - | chr4_2:69442516-69442535 | Msa0618470:intron | 30.0% |
| CCCACGAAATTAAAATGAAA+AGG | + | chr4_2:69442520-69442539 | None:intergenic | 30.0% | |
| !! | TTCCATTGTTCTGATTTGTT+TGG | - | chr4_2:69442580-69442599 | Msa0618470:intron | 30.0% |
| AACCAAACAAATCAGAACAA+TGG | + | chr4_2:69442585-69442604 | None:intergenic | 30.0% | |
| !! | TTCTGATTTGTTTGGTTTCT+AGG | - | chr4_2:69442588-69442607 | Msa0618470:intron | 30.0% |
| !! | TCTGATTTGTTTGGTTTCTA+GGG | - | chr4_2:69442589-69442608 | Msa0618470:intron | 30.0% |
| ! | TTGACATTGTTCTTCTGTTT+TGG | - | chr4_2:69442624-69442643 | Msa0618470:intron | 30.0% |
| GACGTAATTAGTAATATGGA+TGG | - | chr4_2:69442707-69442726 | Msa0618470:intron | 30.0% | |
| ! | ATGCATTTTTATATTGTCCG+TGG | - | chr4_2:69442914-69442933 | Msa0618470:intron | 30.0% |
| TGATGAAGATTGTTTCCATA+TGG | + | chr4_2:69443425-69443444 | None:intergenic | 30.0% | |
| AAGATTGAGGTAAGTAGATA+TGG | - | chr4_2:69443617-69443636 | Msa0618470:intron | 30.0% | |
| AGCTGACAATTAATTACTCA+AGG | - | chr4_2:69443662-69443681 | Msa0618470:intron | 30.0% | |
| AGATCCATCATTATTGATGT+CGG | + | chr4_2:69443876-69443895 | None:intergenic | 30.0% | |
| TGGATCTTCTTACTATATGT+TGG | - | chr4_2:69443889-69443908 | Msa0618470:intron | 30.0% | |
| ATGGTTTACTACATTTCTTG+AGG | + | chr4_2:69444048-69444067 | None:intergenic | 30.0% | |
| ! | ATAGTCTTGAGATGGAAAAA+TGG | + | chr4_2:69444067-69444086 | None:intergenic | 30.0% |
| ! | AAGTAACTATAGTCTTGAGA+TGG | + | chr4_2:69444075-69444094 | None:intergenic | 30.0% |
| TATATCTCTTCTGTTTGCTT+TGG | - | chr4_2:69444156-69444175 | Msa0618470:intron | 30.0% | |
| TCTATATGTGATTGATACCT+AGG | - | chr4_2:69444209-69444228 | Msa0618470:intron | 30.0% | |
| CTATATGTGATTGATACCTA+GGG | - | chr4_2:69444210-69444229 | Msa0618470:intron | 30.0% | |
| ! | ATAGAGCAAATTTTCATGGA+TGG | + | chr4_2:69444277-69444296 | None:intergenic | 30.0% |
| ! | TCAGATAGAGCAAATTTTCA+TGG | + | chr4_2:69444281-69444300 | None:intergenic | 30.0% |
| ! | TGAAAATTTGCTCTATCTGA+AGG | - | chr4_2:69444281-69444300 | Msa0618470:intron | 30.0% |
| ! | GAAAATTTGCTCTATCTGAA+GGG | - | chr4_2:69444282-69444301 | Msa0618470:intron | 30.0% |
| !!! | ATATTTTGTGCTGTTTGTTC+AGG | - | chr4_2:69444392-69444411 | Msa0618470:intron | 30.0% |
| !!! | TATTTTGTGCTGTTTGTTCA+GGG | - | chr4_2:69444393-69444412 | Msa0618470:intron | 30.0% |
| TGGTTTAGTATTATGTCGTT+AGG | - | chr4_2:69444463-69444482 | Msa0618470:intron | 30.0% | |
| TCAGAAGAAGAAGCTTATAT+AGG | - | chr4_2:69444537-69444556 | Msa0618470:intron | 30.0% | |
| ! | CTCCATAAGTTGTTTACTTT+TGG | + | chr4_2:69444833-69444852 | None:intergenic | 30.0% |
| TAAAACCTGTCAACTTAGTT+AGG | - | chr4_2:69445057-69445076 | Msa0618470:intron | 30.0% | |
| AAACTATAGTCTATCGATGA+TGG | + | chr4_2:69445083-69445102 | None:intergenic | 30.0% | |
| ! | TTTTCTCAAAAGATGTTTCC+AGG | + | chr4_2:69445328-69445347 | None:intergenic | 30.0% |
| CAACTATAATATATGGCAAC+AGG | - | chr4_2:69445378-69445397 | Msa0618470:intron | 30.0% | |
| TCAAGGTGTGATAAGAAAAA+TGG | + | chr4_2:69445405-69445424 | None:intergenic | 30.0% | |
| ! | AAAAAAAGCATAAGGAGGTT+TGG | + | chr4_2:69445466-69445485 | None:intergenic | 30.0% |
| ! | GGAAAAAAAAAAGCATAAGG+AGG | + | chr4_2:69445471-69445490 | None:intergenic | 30.0% |
| ! | GAGGGAAAAAAAAAAGCATA+AGG | + | chr4_2:69445474-69445493 | None:intergenic | 30.0% |
| !! | TATTTTTGCGACAATTGAGA+GGG | + | chr4_2:69445492-69445511 | None:intergenic | 30.0% |
| !!! | TTATTTTTGCGACAATTGAG+AGG | + | chr4_2:69445493-69445512 | None:intergenic | 30.0% |
| ! | TCGAATCAACAAAGGTTTTT+CGG | + | chr4_2:69445561-69445580 | None:intergenic | 30.0% |
| !!! | TAGTATGGAGCTTTTTTCTT+GGG | + | chr4_2:69445712-69445731 | None:intergenic | 30.0% |
| !!! | TTAGTATGGAGCTTTTTTCT+TGG | + | chr4_2:69445713-69445732 | None:intergenic | 30.0% |
| ! | TGTTGATGTTTTCATTTTGG+TGG | + | chr4_2:69445899-69445918 | None:intergenic | 30.0% |
| ATATCTATTGAGGAAGTAGT+TGG | + | chr4_2:69445940-69445959 | None:intergenic | 30.0% | |
| GTGATCAATTCTATGTTTAC+TGG | - | chr4_2:69446211-69446230 | Msa0618470:intron | 30.0% | |
| ! | TACTGGATTTTCACTTTCAT+TGG | - | chr4_2:69446228-69446247 | Msa0618470:intron | 30.0% |
| !! | CTTTTCTTTTATTTGTCCAC+AGG | + | chr4_2:69446289-69446308 | None:intergenic | 30.0% |
| CTAATATTGTTAGCAAGTCT+AGG | - | chr4_2:69446398-69446417 | Msa0618470:intron | 30.0% | |
| ATAAATCCACACAAATTAGG+TGG | - | chr4_2:69446425-69446444 | Msa0618470:intron | 30.0% | |
| GACGCAAAATAGTGAATAAA+TGG | - | chr4_2:69446577-69446596 | Msa0618470:CDS | 30.0% | |
| ! | GACTTTAGAAGATATGGATT+TGG | - | chr4_2:69446695-69446714 | Msa0618470:CDS | 30.0% |
| TTTACTTAAACCTACATGCA+TGG | - | chr4_2:69446866-69446885 | Msa0618470:intron | 30.0% | |
| !!! | TCTGATTTTTTGCTTTGCTT+TGG | + | chr4_2:69446972-69446991 | None:intergenic | 30.0% |
| AGCAGGATGATATATATGTA+TGG | - | chr4_2:69447294-69447313 | Msa0618470:intron | 30.0% | |
| GCAGGATGATATATATGTAT+GGG | - | chr4_2:69447295-69447314 | Msa0618470:intron | 30.0% | |
| TTGAAAAGTGGAGGAAAAAT+AGG | - | chr4_2:69447417-69447436 | Msa0618470:intron | 30.0% | |
| AAAAACGTGAATAAAAGCAG+AGG | - | chr4_2:69447508-69447527 | Msa0618470:intron | 30.0% | |
| !!! | GGTTTTAGCACTATTTTAGT+TGG | + | chr4_2:69447565-69447584 | None:intergenic | 30.0% |
| AGGGAAAATAACAAATTCCA+AGG | - | chr4_2:69447612-69447631 | Msa0618470:intron | 30.0% | |
| AAAATTGGAAACTCTGTAAG+TGG | + | chr4_2:69447868-69447887 | None:intergenic | 30.0% | |
| GACGTTATTCTGGATTTCTT+CGG | + | chr4_2:69442403-69442422 | None:intergenic | 35.0% | |
| !!! | GTTCTTCTGTTTTGGTCAAT+TGG | - | chr4_2:69442632-69442651 | Msa0618470:intron | 35.0% |
| !!! | TTCTGTTTTGGTCAATTGGT+GGG | - | chr4_2:69442636-69442655 | Msa0618470:intron | 35.0% |
| ! | TTTTTATATTGTCCGTGGTG+TGG | - | chr4_2:69442919-69442938 | Msa0618470:intron | 35.0% |
| TCATGACTTTCAGATCGTAT+CGG | + | chr4_2:69443286-69443305 | None:intergenic | 35.0% | |
| CTTTAGGTAACATCACCATA+TGG | - | chr4_2:69443407-69443426 | Msa0618470:intron | 35.0% | |
| ACAAAGAGAACACAACACAT+GGG | - | chr4_2:69443444-69443463 | Msa0618470:intron | 35.0% | |
| ! | CAATTCCAATTTTCCAGTCA+AGG | + | chr4_2:69443562-69443581 | None:intergenic | 35.0% |
| GCAAGAAAATTGATCCGATT+TGG | - | chr4_2:69443796-69443815 | Msa0618470:intron | 35.0% | |
| GATCCATCATTATTGATGTC+GGG | + | chr4_2:69443875-69443894 | None:intergenic | 35.0% | |
| TTTCATGTTACACGAGAGAA+TGG | + | chr4_2:69444103-69444122 | None:intergenic | 35.0% | |
| TCTCGTGTAACATGAAAGTA+AGG | - | chr4_2:69444106-69444125 | Msa0618470:intron | 35.0% | |
| ATCGTGAGTGAAAGAACAAA+CGG | - | chr4_2:69444430-69444449 | Msa0618470:intron | 35.0% | |
| !! | CTTATGGAGCATTGCATAAA+TGG | - | chr4_2:69444844-69444863 | Msa0618470:intron | 35.0% |
| ! | TAAGCTGCTGCAACAATTTT+GGG | + | chr4_2:69444905-69444924 | None:intergenic | 35.0% |
| ! | ATAAGCTGCTGCAACAATTT+TGG | + | chr4_2:69444906-69444925 | None:intergenic | 35.0% |
| ! | AACAATTTTGCCAAGGGATT+AGG | + | chr4_2:69444955-69444974 | None:intergenic | 35.0% |
| ! | ATGCAGAACAATTTTGCCAA+GGG | + | chr4_2:69444961-69444980 | None:intergenic | 35.0% |
| !! | CATTGGCTCGAAAAATCAAA+TGG | + | chr4_2:69445032-69445051 | None:intergenic | 35.0% |
| ! | TGACAGGTTTTACTTGACAT+TGG | + | chr4_2:69445049-69445068 | None:intergenic | 35.0% |
| AACCACAAAAATAACGTTGC+AGG | - | chr4_2:69445254-69445273 | Msa0618470:intron | 35.0% | |
| !!! | TTCCTGCAACGTTATTTTTG+TGG | + | chr4_2:69445259-69445278 | None:intergenic | 35.0% |
| !! | TTTTCGTTTTTATCCGCAAG+TGG | + | chr4_2:69445635-69445654 | None:intergenic | 35.0% |
| !! | CAAAAGGTGCCACATATATA+CGG | - | chr4_2:69445667-69445686 | Msa0618470:CDS | 35.0% |
| ! | TTTGGTGTACCGTATATATG+TGG | + | chr4_2:69445679-69445698 | None:intergenic | 35.0% |
| ACTCTAGCATCAGATTAGTA+TGG | + | chr4_2:69445727-69445746 | None:intergenic | 35.0% | |
| AGTATGCAACCAAGGAAAAT+AGG | - | chr4_2:69445744-69445763 | Msa0618470:CDS | 35.0% | |
| ! | AATGGCTTTCCTATTTTCCT+TGG | + | chr4_2:69445756-69445775 | None:intergenic | 35.0% |
| !! | TAGAAAGGATGGGTTAGTTA+TGG | + | chr4_2:69445802-69445821 | None:intergenic | 35.0% |
| ATTAATAATCAATGGCACGG+TGG | + | chr4_2:69446146-69446165 | None:intergenic | 35.0% | |
| !! | TTCTTTTATTTGTCCACAGG+TGG | + | chr4_2:69446286-69446305 | None:intergenic | 35.0% |
| !!! | TTTCTTTTTGGTTGCTCTCT+AGG | + | chr4_2:69446366-69446385 | None:intergenic | 35.0% |
| ! | AGCTGTGACTTTAGAAGATA+TGG | - | chr4_2:69446689-69446708 | Msa0618470:CDS | 35.0% |
| !!! | GATTTTTTGCTTTGCTTTGG+AGG | + | chr4_2:69446969-69446988 | None:intergenic | 35.0% |
| GGTCCATAATCATAGAGTTA+AGG | - | chr4_2:69447091-69447110 | Msa0618470:intron | 35.0% | |
| ! | TGGAGAGTTTGTAGTTTTCT+AGG | - | chr4_2:69447339-69447358 | Msa0618470:intron | 35.0% |
| ! | AGAGTTTGTAGTTTTCTAGG+CGG | - | chr4_2:69447342-69447361 | Msa0618470:intron | 35.0% |
| TATAGTAGCACGTTGAAAAG+TGG | - | chr4_2:69447405-69447424 | Msa0618470:intron | 35.0% | |
| CTCTACTTCATGTGCATTAA+CGG | + | chr4_2:69447594-69447613 | None:intergenic | 35.0% | |
| GTTAATGCACATGAAGTAGA+GGG | - | chr4_2:69447593-69447612 | Msa0618470:intron | 35.0% | |
| GGTAACAAAAAAATTCTGGC+TGG | + | chr4_2:69447847-69447866 | None:intergenic | 35.0% | |
| CATCGGCAGATAAGAAAAAT+TGG | + | chr4_2:69447883-69447902 | None:intergenic | 35.0% | |
| ! | TGGTTGATTGATTGGTAGCT+AGG | + | chr4_2:69442189-69442208 | None:intergenic | 40.0% |
| GTTGGGTATGGTTGATTGAT+TGG | + | chr4_2:69442197-69442216 | None:intergenic | 40.0% | |
| GAATTTGGATCTGTTGGGTA+TGG | + | chr4_2:69442209-69442228 | None:intergenic | 40.0% | |
| GATTGATTGAGAAGATGCAG+AGG | + | chr4_2:69442320-69442339 | None:intergenic | 40.0% | |
| !!! | CTTCTGTTTTGGTCAATTGG+TGG | - | chr4_2:69442635-69442654 | Msa0618470:intron | 40.0% |
| ! | TGTCCAGTTCTGTCTTTTGA+GGG | - | chr4_2:69443101-69443120 | Msa0618470:intron | 40.0% |
| ATATACCGCTCACATACATG+TGG | - | chr4_2:69443180-69443199 | Msa0618470:intron | 40.0% | |
| TGTGGATTCGATTTAGTCGT+TGG | - | chr4_2:69443198-69443217 | Msa0618470:intron | 40.0% | |
| TACGAAAATGTCTTGCACGT+TGG | - | chr4_2:69443224-69443243 | Msa0618470:intron | 40.0% | |
| CACAAAGAGAACACAACACA+TGG | - | chr4_2:69443443-69443462 | Msa0618470:intron | 40.0% | |
| CATTTACGACTCAAGAGACT+GGG | - | chr4_2:69443474-69443493 | Msa0618470:intron | 40.0% | |
| GTGAACCTTGACTGGAAAAT+TGG | - | chr4_2:69443554-69443573 | Msa0618470:intron | 40.0% | |
| GAAAATTGGAATTGCAGCCA+AGG | - | chr4_2:69443568-69443587 | Msa0618470:intron | 40.0% | |
| TGCTAAGAAGGAGAAGATTG+AGG | - | chr4_2:69443604-69443623 | Msa0618470:intron | 40.0% | |
| GTACCCGACATCAATAATGA+TGG | - | chr4_2:69443869-69443888 | Msa0618470:intron | 40.0% | |
| ATTTGCTCTATCTGAAGGGA+AGG | - | chr4_2:69444286-69444305 | Msa0618470:intron | 40.0% | |
| CTAGAAGTTGTTGACGTGAT+TGG | + | chr4_2:69444320-69444339 | None:intergenic | 40.0% | |
| ATGTCGTTAGGTATCTGCAT+TGG | - | chr4_2:69444475-69444494 | Msa0618470:intron | 40.0% | |
| CAAGGGATTAGGACTTCATA+TGG | + | chr4_2:69444944-69444963 | None:intergenic | 40.0% | |
| CATATGAAGTCCTAATCCCT+TGG | - | chr4_2:69444942-69444961 | Msa0618470:intron | 40.0% | |
| ! | CATGCAGAACAATTTTGCCA+AGG | + | chr4_2:69444962-69444981 | None:intergenic | 40.0% |
| TGCGCAAATGGAGCAATTTA+AGG | + | chr4_2:69445199-69445218 | None:intergenic | 40.0% | |
| AGACATGAAGCTACTTCATG+TGG | - | chr4_2:69445231-69445250 | Msa0618470:intron | 40.0% | |
| !! | AGCATAAGGAGGTTTGGTTT+TGG | + | chr4_2:69445460-69445479 | None:intergenic | 40.0% |
| ! | GTTTTTATCCGCAAGTGGTA+CGG | + | chr4_2:69445630-69445649 | None:intergenic | 40.0% |
| ! | CCTATGGGCTGTTATTAGAA+TGG | + | chr4_2:69445774-69445793 | None:intergenic | 40.0% |
| CCATTCTAATAACAGCCCAT+AGG | - | chr4_2:69445771-69445790 | Msa0618470:intron | 40.0% | |
| TTAGTTATGGCAGTGCCTAT+GGG | + | chr4_2:69445789-69445808 | None:intergenic | 40.0% | |
| CAGTTAGGCTTAGAAAGGAT+GGG | + | chr4_2:69445812-69445831 | None:intergenic | 40.0% | |
| ACAGTTAGGCTTAGAAAGGA+TGG | + | chr4_2:69445813-69445832 | None:intergenic | 40.0% | |
| CTGTCATAACAGTTTGTGTG+TGG | + | chr4_2:69445875-69445894 | None:intergenic | 40.0% | |
| ATTGAGGAAGTAGTTGGTTG+TGG | + | chr4_2:69445934-69445953 | None:intergenic | 40.0% | |
| GAGAGAAAGAGAGAAGCAAA+TGG | - | chr4_2:69445996-69446015 | Msa0618470:intron | 40.0% | |
| AGAAAGAGAGAAGCAAATGG+AGG | - | chr4_2:69445999-69446018 | Msa0618470:intron | 40.0% | |
| ! | TTGGTGCAATACTTGTTGCT+TGG | - | chr4_2:69446247-69446266 | Msa0618470:intron | 40.0% |
| !! | TTTTATTTGTCCACAGGTGG+AGG | + | chr4_2:69446283-69446302 | None:intergenic | 40.0% |
| ! | TAAGTGCCACCTAATTTGTG+TGG | + | chr4_2:69446434-69446453 | None:intergenic | 40.0% |
| ! | TGGATTTGGATGCTATTTGC+TGG | - | chr4_2:69446709-69446728 | Msa0618470:CDS | 40.0% |
| TCTGCTTATTCCATGCATGT+AGG | + | chr4_2:69446879-69446898 | None:intergenic | 40.0% | |
| TTGCAAGTAACAGGGGAAAT+TGG | - | chr4_2:69447190-69447209 | Msa0618470:intron | 40.0% | |
| TATGGCAGCAATCAAGTTAG+AGG | - | chr4_2:69447214-69447233 | Msa0618470:intron | 40.0% | |
| TTACGATGAAACCAACAACC+AGG | - | chr4_2:69447260-69447279 | Msa0618470:intron | 40.0% | |
| TATGGGAAAGCCAACAGATA+TGG | - | chr4_2:69447312-69447331 | Msa0618470:intron | 40.0% | |
| TACTTCATGTGCATTAACGG+AGG | + | chr4_2:69447591-69447610 | None:intergenic | 40.0% | |
| CGTTAATGCACATGAAGTAG+AGG | - | chr4_2:69447592-69447611 | Msa0618470:intron | 40.0% | |
| TGCGTGTGTTTAGAGAGAGA+AGG | - | chr4_2:69442261-69442280 | Msa0618470:three_prime_UTR | 45.0% | |
| GCGTGTGTTTAGAGAGAGAA+GGG | - | chr4_2:69442262-69442281 | Msa0618470:three_prime_UTR | 45.0% | |
| CGTGTGTTTAGAGAGAGAAG+GGG | - | chr4_2:69442263-69442282 | Msa0618470:three_prime_UTR | 45.0% | |
| TTTAGAGAGAGAAGGGGCTA+TGG | - | chr4_2:69442269-69442288 | Msa0618470:three_prime_UTR | 45.0% | |
| GATTTCTTCGGAGACGCATT+TGG | + | chr4_2:69442391-69442410 | None:intergenic | 45.0% | |
| CCAAAACGACGACGTTATTC+TGG | + | chr4_2:69442413-69442432 | None:intergenic | 45.0% | |
| ! | CCAGAATAACGTCGTCGTTT+TGG | - | chr4_2:69442410-69442429 | Msa0618470:intron | 45.0% |
| ATTACCTTGACAGCGAGAGT+GGG | + | chr4_2:69442474-69442493 | None:intergenic | 45.0% | |
| AGTACTATGACACCACACCA+CGG | + | chr4_2:69442934-69442953 | None:intergenic | 45.0% | |
| ! | CTGTCCAGTTCTGTCTTTTG+AGG | - | chr4_2:69443100-69443119 | Msa0618470:intron | 45.0% |
| ! | GTCCAGTTCTGTCTTTTGAG+GGG | - | chr4_2:69443102-69443121 | Msa0618470:intron | 45.0% |
| ATCCCCTCAAAAGACAGAAC+TGG | + | chr4_2:69443107-69443126 | None:intergenic | 45.0% | |
| CGAATCCACATGTATGTGAG+CGG | + | chr4_2:69443188-69443207 | None:intergenic | 45.0% | |
| GCATTTACGACTCAAGAGAC+TGG | - | chr4_2:69443473-69443492 | Msa0618470:intron | 45.0% | |
| ! | GAACTACCTGGCATGCTTTT+GGG | - | chr4_2:69443496-69443515 | Msa0618470:intron | 45.0% |
| !! | TGGCATGCTTTTGGGTAGAT+GGG | - | chr4_2:69443504-69443523 | Msa0618470:intron | 45.0% |
| AGGTTAGTGTGAACCTTGAC+TGG | - | chr4_2:69443546-69443565 | Msa0618470:intron | 45.0% | |
| TTGGAATTGCAGCCAAGGAT+TGG | - | chr4_2:69443573-69443592 | Msa0618470:intron | 45.0% | |
| TGGAATTGCAGCCAAGGATT+GGG | - | chr4_2:69443574-69443593 | Msa0618470:intron | 45.0% | |
| TTGGGACTCAGTTGCTAAGA+AGG | - | chr4_2:69443592-69443611 | Msa0618470:intron | 45.0% | |
| CTTGAGCTGAGAAAGCTAGA+AGG | - | chr4_2:69444240-69444259 | Msa0618470:intron | 45.0% | |
| AAAGCTAGAAGGAGCTGTAG+AGG | - | chr4_2:69444251-69444270 | Msa0618470:intron | 45.0% | |
| TGAAAGAACAAACGGCAGAG+TGG | - | chr4_2:69444438-69444457 | Msa0618470:intron | 45.0% | |
| GAGTCTCAGCTTTGCAATTG+TGG | - | chr4_2:69444497-69444516 | Msa0618470:intron | 45.0% | |
| ! | GATGGCCTAACTAAGTTGAC+AGG | + | chr4_2:69445065-69445084 | None:intergenic | 45.0% |
| GCTTCATGTCTTTGCGCAAA+TGG | + | chr4_2:69445211-69445230 | None:intergenic | 45.0% | |
| TATGAAAGCCGTACCACTTG+CGG | - | chr4_2:69445619-69445638 | Msa0618470:three_prime_UTR | 45.0% | |
| ! | TTCTTGGGCAAGGTGGTTTT+TGG | + | chr4_2:69445697-69445716 | None:intergenic | 45.0% |
| !!! | AGCTTTTTTCTTGGGCAAGG+TGG | + | chr4_2:69445704-69445723 | None:intergenic | 45.0% |
| !!! | TGGAGCTTTTTTCTTGGGCA+AGG | + | chr4_2:69445707-69445726 | None:intergenic | 45.0% |
| GATGCTAGAGTATGCAACCA+AGG | - | chr4_2:69445736-69445755 | Msa0618470:CDS | 45.0% | |
| GTTAGTTATGGCAGTGCCTA+TGG | + | chr4_2:69445790-69445809 | None:intergenic | 45.0% | |
| CTGCACAGTTAGGCTTAGAA+AGG | + | chr4_2:69445817-69445836 | None:intergenic | 45.0% | |
| AGTACACTCCCAAACAGCAA+TGG | - | chr4_2:69445835-69445854 | Msa0618470:intron | 45.0% | |
| TTTGTGTGTGGCTGTTATGC+GGG | + | chr4_2:69445863-69445882 | None:intergenic | 45.0% | |
| GTTTGTGTGTGGCTGTTATG+CGG | + | chr4_2:69445864-69445883 | None:intergenic | 45.0% | |
| GCTTCTCTCTTTCTCTCAGT+TGG | + | chr4_2:69445993-69446012 | None:intergenic | 45.0% | |
| ACTAGCTGCAATGCTGCAAA+AGG | + | chr4_2:69446095-69446114 | None:intergenic | 45.0% | |
| TGTTATTGTTCCTCCACCTG+TGG | - | chr4_2:69446270-69446289 | Msa0618470:intron | 45.0% | |
| TTCGTGTTCGCATGCTTTGT+CGG | + | chr4_2:69446915-69446934 | None:intergenic | 45.0% | |
| TTGCAAGAGGTCGATATGTC+CGG | + | chr4_2:69447176-69447195 | None:intergenic | 45.0% | |
| ATCGACCTCTTGCAAGTAAC+AGG | - | chr4_2:69447181-69447200 | Msa0618470:intron | 45.0% | |
| TCGACCTCTTGCAAGTAACA+GGG | - | chr4_2:69447182-69447201 | Msa0618470:intron | 45.0% | |
| ! | TTTCCCCTGTTACTTGCAAG+AGG | + | chr4_2:69447189-69447208 | None:intergenic | 45.0% |
| GTAACAGGGGAAATTGGCTA+TGG | - | chr4_2:69447196-69447215 | Msa0618470:intron | 45.0% | |
| GCTCATATCATCCTGGTTGT+TGG | + | chr4_2:69447274-69447293 | None:intergenic | 45.0% | |
| AAGCCAACAGATATGGTGAG+TGG | - | chr4_2:69447319-69447338 | Msa0618470:intron | 45.0% | |
| TCTCCACTCACCATATCTGT+TGG | + | chr4_2:69447325-69447344 | None:intergenic | 45.0% | |
| ! | TTTTCTAGGCGGCATAGCAA+AGG | - | chr4_2:69447353-69447372 | Msa0618470:intron | 45.0% |
| AGTAGCACGTTGAAAAGTGG+AGG | - | chr4_2:69447408-69447427 | Msa0618470:intron | 45.0% | |
| GTGAATAAAAGCAGAGGACG+AGG | - | chr4_2:69447514-69447533 | Msa0618470:intron | 45.0% | |
| TCTGGCTGGTACTTGTAAGT+AGG | + | chr4_2:69447833-69447852 | None:intergenic | 45.0% | |
| TACCTTCCACACTCGCTATC+TGG | - | chr4_2:69442343-69442362 | Msa0618470:three_prime_UTR | 50.0% | |
| TTCGGAGACGCATTTGGTAC+CGG | + | chr4_2:69442385-69442404 | None:intergenic | 50.0% | |
| GGACTACGGGTATGATCATC+GGG | + | chr4_2:69442453-69442472 | None:intergenic | 50.0% | |
| GGGACTACGGGTATGATCAT+CGG | + | chr4_2:69442454-69442473 | None:intergenic | 50.0% | |
| CATTACCTTGACAGCGAGAG+TGG | + | chr4_2:69442475-69442494 | None:intergenic | 50.0% | |
| AGATCAAACCTACGCTGCTC+AGG | + | chr4_2:69443033-69443052 | None:intergenic | 50.0% | |
| TCAAGAGACTGGGAACTACC+TGG | - | chr4_2:69443484-69443503 | Msa0618470:intron | 50.0% | |
| ! | GGAACTACCTGGCATGCTTT+TGG | - | chr4_2:69443495-69443514 | Msa0618470:intron | 50.0% |
| ! | CATCTACCCAAAAGCATGCC+AGG | + | chr4_2:69443505-69443524 | None:intergenic | 50.0% |
| !! | CTGGCATGCTTTTGGGTAGA+TGG | - | chr4_2:69443503-69443522 | Msa0618470:intron | 50.0% |
| !! | GGCATGCTTTTGGGTAGATG+GGG | - | chr4_2:69443505-69443524 | Msa0618470:intron | 50.0% |
| !! | GCATGCTTTTGGGTAGATGG+GGG | - | chr4_2:69443506-69443525 | Msa0618470:intron | 50.0% |
| TGGGTAGATGGGGGTAATCA+AGG | - | chr4_2:69443515-69443534 | Msa0618470:intron | 50.0% | |
| GTAGATGGGGGTAATCAAGG+AGG | - | chr4_2:69443518-69443537 | Msa0618470:intron | 50.0% | |
| AGCAACTGAGTCCCAATCCT+TGG | + | chr4_2:69443588-69443607 | None:intergenic | 50.0% | |
| TGTTCAGGGAAGCAGAGATG+AGG | - | chr4_2:69444407-69444426 | Msa0618470:intron | 50.0% | |
| CACAACTCATAAGACCCGTG+CGG | + | chr4_2:69444603-69444622 | None:intergenic | 50.0% | |
| ! | TGGGAGTGTACTGCACAGTT+AGG | + | chr4_2:69445827-69445846 | None:intergenic | 50.0% |
| !! | TGCGGGAACCATTGCTGTTT+GGG | + | chr4_2:69445846-69445865 | None:intergenic | 50.0% |
| ! | ATGCGGGAACCATTGCTGTT+TGG | + | chr4_2:69445847-69445866 | None:intergenic | 50.0% |
| AATCAATGGCACGGTGGACA+TGG | + | chr4_2:69446140-69446159 | None:intergenic | 50.0% | |
| TGATTATGGACCTGTGTCCG+CGG | + | chr4_2:69447083-69447102 | None:intergenic | 50.0% | |
| TGCAAGAGGTCGATATGTCC+GGG | + | chr4_2:69447175-69447194 | None:intergenic | 50.0% | |
| CGACCTCTTGCAAGTAACAG+GGG | - | chr4_2:69447183-69447202 | Msa0618470:intron | 50.0% | |
| ACCAGGATGATATGAGCAGC+AGG | - | chr4_2:69447277-69447296 | Msa0618470:intron | 50.0% | |
| TCCTGCTGCTCATATCATCC+TGG | + | chr4_2:69447281-69447300 | None:intergenic | 50.0% | |
| CATGTGCATTAACGGAGGCT+TGG | + | chr4_2:69447586-69447605 | None:intergenic | 50.0% | |
| AGCCAGATAGCGAGTGTGGA+AGG | + | chr4_2:69442348-69442367 | None:intergenic | 55.0% | |
| CGTAAGCCAGATAGCGAGTG+TGG | + | chr4_2:69442352-69442371 | None:intergenic | 55.0% | |
| TGGCTTACGTTACCCACCAC+CGG | - | chr4_2:69442363-69442382 | Msa0618470:three_prime_UTR | 55.0% | |
| !! | ACGCATTTGGTACCGGTGGT+GGG | + | chr4_2:69442378-69442397 | None:intergenic | 55.0% |
| TGACAGCGAGAGTGGGACTA+CGG | + | chr4_2:69442467-69442486 | None:intergenic | 55.0% | |
| TAGTCCCACTCTCGCTGTCA+AGG | - | chr4_2:69442467-69442486 | Msa0618470:intron | 55.0% | |
| !!! | TTTTGGAGCCTGAGCAGCGT+AGG | - | chr4_2:69443022-69443041 | Msa0618470:intron | 55.0% |
| GGGTAATCAAGGAGGTCACG+AGG | - | chr4_2:69443526-69443545 | Msa0618470:intron | 55.0% | |
| CAGCTCAAGCTCAACTCCCT+AGG | + | chr4_2:69444229-69444248 | None:intergenic | 55.0% | |
| GAACAAACGGCAGAGTGGCA+TGG | - | chr4_2:69444443-69444462 | Msa0618470:intron | 55.0% | |
| CTTCGCAGCTCACATGCTGT+CGG | + | chr4_2:69447051-69447070 | None:intergenic | 55.0% | |
| GATATGTCCGGGCTTCATGG+TGG | + | chr4_2:69447164-69447183 | None:intergenic | 55.0% | |
| GTCGATATGTCCGGGCTTCA+TGG | + | chr4_2:69447167-69447186 | None:intergenic | 55.0% | |
| CTAGGCGGCATAGCAAAGGA+TGG | - | chr4_2:69447357-69447376 | Msa0618470:intron | 55.0% | |
| AGCAGAGGACGAGGACACTT+TGG | - | chr4_2:69447523-69447542 | Msa0618470:intron | 55.0% | |
| !! | GACGCATTTGGTACCGGTGG+TGG | + | chr4_2:69442379-69442398 | None:intergenic | 60.0% |
| ! | GGAGACGCATTTGGTACCGG+TGG | + | chr4_2:69442382-69442401 | None:intergenic | 60.0% |
| GACAGCGAGAGTGGGACTAC+GGG | + | chr4_2:69442466-69442485 | None:intergenic | 60.0% | |
| TTTATGACCCGTGCGCCGCA+CGG | - | chr4_2:69444585-69444604 | Msa0618470:intron | 60.0% | |
| CGACAGCATGTGAGCTGCGA+AGG | - | chr4_2:69447049-69447068 | Msa0618470:intron | 60.0% | |
| TTATGACCCGTGCGCCGCAC+GGG | - | chr4_2:69444586-69444605 | Msa0618470:intron | 65.0% | |
| ATAAGACCCGTGCGGCGCAC+GGG | + | chr4_2:69444595-69444614 | None:intergenic | 65.0% | |
| CATAAGACCCGTGCGGCGCA+CGG | + | chr4_2:69444596-69444615 | None:intergenic | 65.0% | |
| CTGCGAAGGCAGATGAGCCG+CGG | - | chr4_2:69447063-69447082 | Msa0618470:intron | 65.0% | |
| GGCAGATGAGCCGCGGACAC+AGG | - | chr4_2:69447070-69447089 | Msa0618470:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 69442157 | 69448045 | 69442157 | ID=Msa0618470;Name=Msa0618470 |
| chr4_2 | mRNA | 69442157 | 69448045 | 69442157 | ID=Msa0618470-mRNA-1;Parent=Msa0618470;Name=Msa0618470-mRNA-1;_AED=0.13;_eAED=0.13;_QI=131|1|1|1|0.75|0.6|5|285|211 |
| chr4_2 | exon | 69442157 | 69442416 | 69442157 | ID=Msa0618470-mRNA-1:exon:20084;Parent=Msa0618470-mRNA-1 |
| chr4_2 | exon | 69445619 | 69445788 | 69445619 | ID=Msa0618470-mRNA-1:exon:20083;Parent=Msa0618470-mRNA-1 |
| chr4_2 | exon | 69445895 | 69445971 | 69445895 | ID=Msa0618470-mRNA-1:exon:20082;Parent=Msa0618470-mRNA-1 |
| chr4_2 | exon | 69446577 | 69446789 | 69446577 | ID=Msa0618470-mRNA-1:exon:20081;Parent=Msa0618470-mRNA-1 |
| chr4_2 | exon | 69447714 | 69448045 | 69447714 | ID=Msa0618470-mRNA-1:exon:20080;Parent=Msa0618470-mRNA-1 |
| chr4_2 | five_prime_UTR | 69447915 | 69448045 | 69447915 | ID=Msa0618470-mRNA-1:five_prime_utr;Parent=Msa0618470-mRNA-1 |
| chr4_2 | CDS | 69447714 | 69447914 | 69447714 | ID=Msa0618470-mRNA-1:cds;Parent=Msa0618470-mRNA-1 |
| chr4_2 | CDS | 69446577 | 69446789 | 69446577 | ID=Msa0618470-mRNA-1:cds;Parent=Msa0618470-mRNA-1 |
| chr4_2 | CDS | 69445895 | 69445971 | 69445895 | ID=Msa0618470-mRNA-1:cds;Parent=Msa0618470-mRNA-1 |
| chr4_2 | CDS | 69445644 | 69445788 | 69445644 | ID=Msa0618470-mRNA-1:cds;Parent=Msa0618470-mRNA-1 |
| chr4_2 | three_prime_UTR | 69445619 | 69445643 | 69445619 | ID=Msa0618470-mRNA-1:three_prime_utr;Parent=Msa0618470-mRNA-1 |
| chr4_2 | three_prime_UTR | 69442157 | 69442416 | 69442157 | ID=Msa0618470-mRNA-1:three_prime_utr;Parent=Msa0618470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
