Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574520 | XP_003630866.1 | 95.981 | 821 | 33 | 0 | 1 | 821 | 1 | 821 | 0.0 | 1619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574520 | sp|Q6PFQ7|RASL2_MOUSE | 27.160 | 243 | 152 | 7 | 480 | 711 | 7 | 235 | 2.82e-13 | 77.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574520 | G7L9Q9 | 95.981 | 821 | 33 | 0 | 1 | 821 | 1 | 821 | 0.0 | 1619 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007230 | Msa0574520 | 0.814918 | 1.206276e-51 | -8.615850e-47 |
| Msa0055590 | Msa0574520 | 0.817692 | 2.889802e-52 | -8.615850e-47 |
| Msa0162050 | Msa0574520 | 0.812903 | 3.353463e-51 | -8.615850e-47 |
| Msa0170680 | Msa0574520 | 0.801100 | 1.055980e-48 | -8.615850e-47 |
| Msa0440110 | Msa0574520 | 0.802812 | 4.697318e-49 | -8.615850e-47 |
| Msa0250170 | Msa0574520 | 0.803923 | 2.765446e-49 | -8.615850e-47 |
| Msa0269360 | Msa0574520 | 0.801261 | 9.787200e-49 | -8.615850e-47 |
| Msa0574170 | Msa0574520 | 0.819810 | 9.550014e-53 | -8.615850e-47 |
| Msa0574520 | Msa0574640 | 0.816476 | 5.423525e-52 | -8.615850e-47 |
| Msa0574520 | Msa0575250 | 0.801388 | 9.220508e-49 | -8.615850e-47 |
| Msa0574520 | Msa0575450 | 0.802276 | 6.057086e-49 | -8.615850e-47 |
| Msa0574520 | Msa0708090 | 0.882017 | 1.482225e-70 | -8.615850e-47 |
| Msa0574520 | Msa0708230 | 0.914140 | 2.716609e-84 | -8.615850e-47 |
| Msa0574520 | Msa0792510 | 0.822207 | 2.680030e-53 | -8.615850e-47 |
| Msa0574520 | Msa0909710 | 0.807440 | 5.048558e-50 | -8.615850e-47 |
| Msa0574520 | Msa1036390 | 0.816454 | 5.484998e-52 | -8.615850e-47 |
| Msa0574520 | Msa1076680 | 0.830188 | 3.379934e-55 | -8.615850e-47 |
| Msa0574520 | Msa1161760 | 0.832710 | 8.092494e-56 | -8.615850e-47 |
| Msa0574520 | Msa1201990 | 0.820690 | 6.004956e-53 | -8.615850e-47 |
| Msa0574520 | Msa1267330 | 0.827027 | 1.961965e-54 | -8.615850e-47 |
| Msa0574520 | Msa1316050 | 0.802260 | 6.103555e-49 | -8.615850e-47 |
| Msa0574520 | Msa1329990 | 0.812071 | 5.099007e-51 | -8.615850e-47 |
| Msa0574520 | Msa1373950 | 0.824387 | 8.299856e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574520 | MtrunA17_Chr8g0391121 | 95.864 | 822 | 33 | 1 | 1 | 821 | 1 | 822 | 0.0 | 1615 |
| Msa0574520 | MtrunA17_Chr6g0484401 | 72.527 | 819 | 210 | 7 | 1 | 811 | 1 | 812 | 0.0 | 1174 |
| Msa0574520 | MtrunA17_Chr2g0313621 | 31.034 | 116 | 75 | 2 | 612 | 723 | 285 | 399 | 8.71e-13 | 72.4 |
| Msa0574520 | MtrunA17_Chr4g0064531 | 21.970 | 528 | 338 | 22 | 99 | 592 | 69 | 556 | 8.06e-12 | 68.9 |
| Msa0574520 | MtrunA17_Chr4g0033151 | 25.296 | 253 | 148 | 8 | 480 | 696 | 42 | 289 | 1.34e-11 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574520 | AT3G18370.1 | 56.134 | 807 | 336 | 7 | 15 | 815 | 14 | 808 | 0.0 | 847 |
| Msa0574520 | AT1G05500.2 | 27.273 | 297 | 171 | 10 | 470 | 722 | 110 | 405 | 1.07e-19 | 93.2 |
| Msa0574520 | AT1G05500.1 | 21.415 | 523 | 341 | 17 | 99 | 592 | 69 | 550 | 1.04e-13 | 75.1 |
| Msa0574520 | AT3G14590.2 | 30.328 | 122 | 80 | 2 | 618 | 735 | 289 | 409 | 2.49e-12 | 71.2 |
| Msa0574520 | AT3G14590.4 | 30.328 | 122 | 80 | 2 | 618 | 735 | 201 | 321 | 2.59e-12 | 70.9 |
| Msa0574520 | AT3G14590.1 | 31.818 | 110 | 70 | 2 | 618 | 723 | 244 | 352 | 2.72e-12 | 70.9 |
| Msa0574520 | AT3G14590.5 | 30.328 | 122 | 80 | 2 | 618 | 735 | 203 | 323 | 2.75e-12 | 70.9 |
| Msa0574520 | AT3G14590.3 | 31.818 | 110 | 70 | 2 | 618 | 723 | 258 | 366 | 2.88e-12 | 70.9 |
| Msa0574520 | AT1G53590.1 | 32.520 | 123 | 76 | 3 | 618 | 736 | 288 | 407 | 4.33e-12 | 70.5 |
Find 235 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCTTCTTCCAAATTAT+TGG | 0.142286 | 4_1:+78081727 | None:intergenic |
| AATTTATGAACCACAGAAAT+TGG | 0.178547 | 4_1:-78081915 | Msa0574520:five_prime_UTR |
| TTTGATGATTCCCAATAATT+TGG | 0.180864 | 4_1:-78081738 | Msa0574520:CDS |
| GACTTAAAATAGAAGCAATT+TGG | 0.181599 | 4_1:-78077132 | Msa0574520:CDS |
| GTTTGCCTGCAGTTGATTTA+AGG | 0.188371 | 4_1:-78079869 | Msa0574520:CDS |
| GATTAACAGTCTTCATATTA+AGG | 0.202883 | 4_1:-78080589 | Msa0574520:CDS |
| AAGCTTAGGATTAAAATAAT+TGG | 0.210272 | 4_1:+78081206 | None:intergenic |
| TTTGCTTCACTTTCACTAAT+TGG | 0.211318 | 4_1:+78081690 | None:intergenic |
| ATATATGTTTCAGTGATTTC+TGG | 0.224641 | 4_1:-78079825 | Msa0574520:CDS |
| TGTGGTTCATAAATTCTTCT+TGG | 0.234805 | 4_1:+78081923 | None:intergenic |
| GCAAAGAGAATAAGGATAAT+TGG | 0.240121 | 4_1:+78081584 | None:intergenic |
| TTGACAGCGACTCCTGAAAA+TGG | 0.243030 | 4_1:-78080685 | Msa0574520:intron |
| CCTAGCATCTTGTGAAATTA+AGG | 0.272929 | 4_1:-78079544 | Msa0574520:intron |
| ATGGGATACGACATTTAATA+TGG | 0.276237 | 4_1:-78079640 | Msa0574520:CDS |
| TTTCTGGAAACAAACTTTCT+AGG | 0.288787 | 4_1:-78079809 | Msa0574520:CDS |
| CACTAAAGCATTTCACAATT+AGG | 0.290537 | 4_1:+78077272 | None:intergenic |
| CCTCCCAGTTTGGGCCTTCA+AGG | 0.291000 | 4_1:-78080888 | Msa0574520:CDS |
| GACTGTCTTGTTTGAATCTC+TGG | 0.295355 | 4_1:+78076413 | None:intergenic |
| TGGTAGTGCACATGTAAATT+TGG | 0.295602 | 4_1:-78077224 | Msa0574520:CDS |
| TCAACAATTGTGTGGGCAAT+AGG | 0.296961 | 4_1:-78078554 | Msa0574520:CDS |
| GAAGCTTCTTCCAAATTATT+GGG | 0.298654 | 4_1:+78081728 | None:intergenic |
| ATATTGTACCTCTGCTGATT+TGG | 0.304222 | 4_1:+78078454 | None:intergenic |
| TGGATCACGCCCTCCCAGTT+TGG | 0.307725 | 4_1:-78080898 | Msa0574520:CDS |
| AGAAATGAATATTCATAATA+TGG | 0.312568 | 4_1:+78081857 | None:intergenic |
| ATCTATTGTTGTCACAAATA+TGG | 0.313272 | 4_1:-78081230 | Msa0574520:CDS |
| CTTATTGCTGCTGATCTTAG+AGG | 0.322823 | 4_1:-78076915 | Msa0574520:CDS |
| TATCAGCAAAATAAATGAAC+TGG | 0.337446 | 4_1:-78075742 | Msa0574520:CDS |
| GGATCACGCCCTCCCAGTTT+GGG | 0.338838 | 4_1:-78080897 | Msa0574520:CDS |
| CTTGATGCAAAAGACAGATT+TGG | 0.340577 | 4_1:-78077591 | Msa0574520:CDS |
| GTGTAGATGCAAAGAGAATA+AGG | 0.348699 | 4_1:+78081576 | None:intergenic |
| GTGGTTCATAAATTCTTCTT+GGG | 0.353237 | 4_1:+78081924 | None:intergenic |
| TGGGCAATAGGGCCTGATTC+TGG | 0.355523 | 4_1:-78078542 | Msa0574520:CDS |
| CCATACTGCAACTTAATGTA+AGG | 0.356510 | 4_1:+78077558 | None:intergenic |
| AAGACTGTTAATCACAATTC+TGG | 0.357434 | 4_1:+78080599 | None:intergenic |
| GACTGGTACAAGGGTCAATC+AGG | 0.359705 | 4_1:-78077198 | Msa0574520:CDS |
| TTTAATAGTGGATGGAAATC+TGG | 0.369312 | 4_1:-78075856 | Msa0574520:CDS |
| ACTTAAAATAGAAGCAATTT+GGG | 0.369605 | 4_1:-78077131 | Msa0574520:CDS |
| GCCTGGTGTTTCTCCTTGGC+TGG | 0.370816 | 4_1:-78080201 | Msa0574520:intron |
| AGGAGAACAGGTGTGCGTTT+TGG | 0.372091 | 4_1:-78079675 | Msa0574520:CDS |
| TGGGCCTTCAAGGGATTAGA+TGG | 0.373329 | 4_1:-78080878 | Msa0574520:CDS |
| CCTTACATTAAGTTGCAGTA+TGG | 0.376835 | 4_1:-78077558 | Msa0574520:CDS |
| TCATAAATTCTTCTTGGGTT+CGG | 0.380080 | 4_1:+78081929 | None:intergenic |
| AAAGATTCGGTCTTTAATAG+TGG | 0.380863 | 4_1:-78075868 | Msa0574520:CDS |
| AATCCCTTGAAGGCCCAAAC+TGG | 0.381812 | 4_1:+78080884 | None:intergenic |
| CAGAAATTTCACCTCTACTA+TGG | 0.381879 | 4_1:+78081167 | None:intergenic |
| GGTCCTTTACATGCAATGTC+AGG | 0.385025 | 4_1:+78076579 | None:intergenic |
| ATCTTACCTGGCTAGGAATC+TGG | 0.389714 | 4_1:+78076357 | None:intergenic |
| TTTGCTATTACACCAGAATC+AGG | 0.393362 | 4_1:+78078530 | None:intergenic |
| TAGTCATACTTCACACTGTC+AGG | 0.393443 | 4_1:+78079567 | None:intergenic |
| GCATTTGCTCAGTCTCCAAC+TGG | 0.398746 | 4_1:+78075769 | None:intergenic |
| ATGGTCAACCTCTGGTGATC+AGG | 0.399087 | 4_1:-78080859 | Msa0574520:intron |
| GTCAAAGAAGGTACAGAGTC+TGG | 0.400907 | 4_1:+78076389 | None:intergenic |
| AAGGATAATTGGAAGGCAAT+TGG | 0.400911 | 4_1:+78081595 | None:intergenic |
| ATTAACAGTCTTCATATTAA+GGG | 0.404294 | 4_1:-78080588 | Msa0574520:CDS |
| CAGTCCTCAGAAATCACTTA+AGG | 0.407068 | 4_1:-78077679 | Msa0574520:CDS |
| CAGACAGCAGTTGGAGTAGT+AGG | 0.407160 | 4_1:+78077337 | None:intergenic |
| TTGCTTGGTTTATTCACAAA+TGG | 0.407730 | 4_1:-78081631 | Msa0574520:CDS |
| TCAATACTCACTATAAATCT+TGG | 0.408027 | 4_1:+78081053 | None:intergenic |
| CCACTTGAAGGAGTGAGTTC+TGG | 0.410382 | 4_1:-78077163 | Msa0574520:CDS |
| AGGAGGACTTGAACAAGAAA+TGG | 0.416875 | 4_1:-78081400 | Msa0574520:CDS |
| GTCATTATTACAATCATCAA+TGG | 0.418319 | 4_1:+78075454 | None:intergenic |
| GCAGGAAAGGGTTGAAGTGC+TGG | 0.418455 | 4_1:-78080931 | Msa0574520:intron |
| ATTCATAATATGGTGGTAGA+AGG | 0.424585 | 4_1:+78081867 | None:intergenic |
| AGTTGCCTGGTGTTTCTCCT+TGG | 0.424831 | 4_1:-78080205 | Msa0574520:CDS |
| CTACTACTCCAACTGCTGTC+TGG | 0.428303 | 4_1:-78077336 | Msa0574520:CDS |
| TATACTGCAAATGTATTTGA+AGG | 0.428456 | 4_1:-78075429 | Msa0574520:three_prime_UTR |
| GATAACCTTGTTGAAAGCTT+AGG | 0.429137 | 4_1:+78081192 | None:intergenic |
| TTCAAGGGGAGGCAACAAAA+TGG | 0.429566 | 4_1:-78079780 | Msa0574520:CDS |
| CAACAATTGTGTGGGCAATA+GGG | 0.436310 | 4_1:-78078553 | Msa0574520:CDS |
| AGCATACCTTTGATCCCTCT+TGG | 0.438342 | 4_1:+78077101 | None:intergenic |
| CTGACGTCTGGTTCGGAGGA+AGG | 0.439433 | 4_1:+78076501 | None:intergenic |
| CACTTGTCTGACGTCTGGTT+CGG | 0.442433 | 4_1:+78076494 | None:intergenic |
| CTCCCAGTTTGGGCCTTCAA+GGG | 0.443301 | 4_1:-78080887 | Msa0574520:CDS |
| GAGAAGAATTTATGATCTCT+TGG | 0.445073 | 4_1:+78075718 | None:intergenic |
| CAGGCAACTCAGTGGCTGAT+TGG | 0.445771 | 4_1:+78080219 | None:intergenic |
| ACTTTCTAGGAGTTGCTTCA+AGG | 0.450247 | 4_1:-78079796 | Msa0574520:CDS |
| GTTAGAATAGGAATTGCCTT+TGG | 0.450508 | 4_1:-78080254 | Msa0574520:CDS |
| CCATAGTTTACCCTCACAAA+AGG | 0.451988 | 4_1:+78076882 | None:intergenic |
| GAAATGCTTGTCCCATTTGA+GGG | 0.454938 | 4_1:-78078479 | Msa0574520:CDS |
| AGTGTGAATGTATTATCAAT+TGG | 0.456133 | 4_1:-78075392 | Msa0574520:three_prime_UTR |
| ATTTATGAACCACAGAAATT+GGG | 0.458856 | 4_1:-78081914 | Msa0574520:five_prime_UTR |
| TAGGAATTGCCTTTGGAAGC+GGG | 0.463344 | 4_1:-78080247 | Msa0574520:CDS |
| TCAATTTCCACTTCCGTTGA+GGG | 0.463778 | 4_1:+78075692 | None:intergenic |
| ATGTGGGTAGTAAAGCATTA+TGG | 0.465652 | 4_1:+78076558 | None:intergenic |
| TCACGTAGTGTTTGTAAGAA+TGG | 0.465851 | 4_1:-78075571 | Msa0574520:three_prime_UTR |
| TGAAAGTGAAGCAAACTTCA+CGG | 0.465884 | 4_1:-78081682 | Msa0574520:CDS |
| TCCATCATCTAGGAACTCTA+AGG | 0.471854 | 4_1:+78076607 | None:intergenic |
| GAGGAGCTGACAAGGAGAAC+AGG | 0.474710 | 4_1:-78079687 | Msa0574520:CDS |
| TATTTGAAGGGAATTGAGTA+AGG | 0.475831 | 4_1:-78075416 | Msa0574520:three_prime_UTR |
| TGAAATGCTTGTCCCATTTG+AGG | 0.476657 | 4_1:-78078480 | Msa0574520:CDS |
| TGACAGCGACTCCTGAAAAT+GGG | 0.479324 | 4_1:-78080684 | Msa0574520:intron |
| ACCTTAGAGTTCCTAGATGA+TGG | 0.483274 | 4_1:-78076608 | Msa0574520:CDS |
| CAAAACTGTCAACCCTCGTT+GGG | 0.484234 | 4_1:-78076636 | Msa0574520:CDS |
| ATAGTGGTATGACACTAATC+AGG | 0.486631 | 4_1:+78075668 | None:intergenic |
| ATTACACCAGATTCCTAGCC+AGG | 0.486968 | 4_1:-78076363 | Msa0574520:intron |
| TCTCCATCCCTCAACGGAAG+TGG | 0.489394 | 4_1:-78075699 | Msa0574520:CDS |
| CAAGATAATCTTACCTGGCT+AGG | 0.489913 | 4_1:+78076350 | None:intergenic |
| CTGAGGACTGGCATGGAGGT+TGG | 0.491010 | 4_1:+78077692 | None:intergenic |
| GCAAAACATGCAAAGTTATG+TGG | 0.493121 | 4_1:-78078512 | Msa0574520:CDS |
| TCTACACCTGAGGTTAGAAT+AGG | 0.496065 | 4_1:-78080266 | Msa0574520:CDS |
| ATCAATTTCCACTTCCGTTG+AGG | 0.498395 | 4_1:+78075691 | None:intergenic |
| CTGCAGGCAAACTGAAACAG+CGG | 0.498690 | 4_1:+78079880 | None:intergenic |
| GATTTAAGGAAGTATGCTGT+TGG | 0.500240 | 4_1:-78079855 | Msa0574520:CDS |
| CTTAAGTGATTTCTGAGGAC+TGG | 0.500924 | 4_1:+78077680 | None:intergenic |
| ATAGGAATTGCCTTTGGAAG+CGG | 0.505307 | 4_1:-78080248 | Msa0574520:CDS |
| CAACAAAATGGCACAAGTAA+TGG | 0.505516 | 4_1:-78079768 | Msa0574520:CDS |
| TTGACCATCTAATCCCTTGA+AGG | 0.505697 | 4_1:+78080874 | None:intergenic |
| CATTGTTCCAATGTTGTGAC+AGG | 0.505847 | 4_1:+78081264 | None:intergenic |
| CTAATAACAATGTTAAATAG+TGG | 0.508585 | 4_1:+78075652 | None:intergenic |
| GTATCCACTTGTCTGACGTC+TGG | 0.509251 | 4_1:+78076489 | None:intergenic |
| CAATCAGCCACTGAGTTGCC+TGG | 0.509829 | 4_1:-78080218 | Msa0574520:CDS |
| GACGTATGGATCCCACTTGA+AGG | 0.510497 | 4_1:-78077175 | Msa0574520:CDS |
| CTTTCTAGGAGTTGCTTCAA+GGG | 0.512264 | 4_1:-78079795 | Msa0574520:CDS |
| TGGACACAGGGTCCACCATC+GGG | 0.515857 | 4_1:-78076984 | Msa0574520:intron |
| TTTGAGGTAGATGAGAATAG+TGG | 0.517481 | 4_1:-78077304 | Msa0574520:CDS |
| GCAATTCCTATTCTAACCTC+AGG | 0.518982 | 4_1:+78080260 | None:intergenic |
| ATTCGGTCTTTAATAGTGGA+TGG | 0.520549 | 4_1:-78075864 | Msa0574520:CDS |
| ATGGTTGCTAAGCTTTCCGT+TGG | 0.521021 | 4_1:-78080627 | Msa0574520:CDS |
| TCCCCTGACATTGCATGTAA+AGG | 0.521441 | 4_1:-78076582 | Msa0574520:CDS |
| TTAAATGTCGTATCCCATCT+TGG | 0.523652 | 4_1:+78079645 | None:intergenic |
| CTAGGAGTTGCTTCAAGGGG+AGG | 0.523911 | 4_1:-78079791 | Msa0574520:CDS |
| CATCTAGGAACTCTAAGGTC+TGG | 0.524885 | 4_1:+78076612 | None:intergenic |
| GGGATTAGATGGTCAACCTC+TGG | 0.525778 | 4_1:-78080867 | Msa0574520:CDS |
| TCAGGGGACTTCCATCATCT+AGG | 0.527254 | 4_1:+78076597 | None:intergenic |
| TTACTACCCACATCAAGTAT+AGG | 0.528681 | 4_1:-78076548 | Msa0574520:CDS |
| GTCCTTTACATGCAATGTCA+GGG | 0.529283 | 4_1:+78076580 | None:intergenic |
| AGTCCTCAGAAATCACTTAA+GGG | 0.530108 | 4_1:-78077678 | Msa0574520:CDS |
| TTTCCACTTCCGTTGAGGGA+TGG | 0.530811 | 4_1:+78075696 | None:intergenic |
| TGGTGTAATTTAGTCAAAGA+AGG | 0.534973 | 4_1:+78076377 | None:intergenic |
| AAGGGTCAATCAGGGACGTA+TGG | 0.535171 | 4_1:-78077189 | Msa0574520:CDS |
| ACATTCACCTATACTTGATG+TGG | 0.539889 | 4_1:+78076541 | None:intergenic |
| TGAGAATTGTAGTGAAAGAG+TGG | 0.540272 | 4_1:-78077743 | Msa0574520:CDS |
| ACATGTAAATTTGGAAGGAC+TGG | 0.542178 | 4_1:-78077215 | Msa0574520:CDS |
| AATTTGGAAGGACTGGTACA+AGG | 0.542219 | 4_1:-78077208 | Msa0574520:CDS |
| GTTGTGACACCAATACTAGA+TGG | 0.544685 | 4_1:-78080314 | Msa0574520:CDS |
| CACAATTCTGGCAGTACCAA+CGG | 0.547971 | 4_1:+78080611 | None:intergenic |
| CCTTAATTTCACAAGATGCT+AGG | 0.548400 | 4_1:+78079544 | None:intergenic |
| AACTTGTTCTTATTGAAGCG+AGG | 0.551264 | 4_1:-78076941 | Msa0574520:CDS |
| ATCCCTTGAAGGCCCAAACT+GGG | 0.552497 | 4_1:+78080885 | None:intergenic |
| TAGAAGCGGAGGAGCTGACA+AGG | 0.553685 | 4_1:-78079695 | Msa0574520:CDS |
| TACTTCCTTAAATCAACTGC+AGG | 0.555104 | 4_1:+78079864 | None:intergenic |
| CATCGGGCATGACGAATGGT+TGG | 0.555212 | 4_1:-78076968 | Msa0574520:CDS |
| ATTTGGAAGGACTGGTACAA+GGG | 0.556965 | 4_1:-78077207 | Msa0574520:CDS |
| GATAACTGTTGTGGAAGCAA+AGG | 0.557052 | 4_1:-78077616 | Msa0574520:CDS |
| GAAACTTAAGATAACTGTTG+TGG | 0.557431 | 4_1:-78077625 | Msa0574520:CDS |
| AAATGCTTGTCCCATTTGAG+GGG | 0.558460 | 4_1:-78078478 | Msa0574520:CDS |
| CTATATCATTATACAGATTG+TGG | 0.559243 | 4_1:+78075502 | None:intergenic |
| TTAAGGAAGTATGCTGTTGG+AGG | 0.563370 | 4_1:-78079852 | Msa0574520:CDS |
| ATGGACACAGGGTCCACCAT+CGG | 0.566000 | 4_1:-78076985 | Msa0574520:intron |
| CTTACAAACACTACGTGACA+TGG | 0.566137 | 4_1:+78075576 | None:intergenic |
| GCAGTTGGAGTAGTAGGAGG+AGG | 0.566786 | 4_1:+78077343 | None:intergenic |
| AGTGCAGCTAGGAGAAGACT+TGG | 0.568845 | 4_1:+78075525 | None:intergenic |
| AGAAGGGTATATAGCCCAGT+TGG | 0.569404 | 4_1:-78075784 | Msa0574520:CDS |
| CCACCATCGGGCATGACGAA+TGG | 0.570590 | 4_1:-78076972 | Msa0574520:CDS |
| GACATTTGTAGAGGTAGAAG+CGG | 0.571411 | 4_1:-78079709 | Msa0574520:CDS |
| ATTGTAGCCTGTCACAACAT+TGG | 0.572141 | 4_1:-78081271 | Msa0574520:intron |
| ACAGATTGTGGAGTGCAGCT+AGG | 0.573509 | 4_1:+78075514 | None:intergenic |
| CATTAAGTTGCAGTATGGAA+AGG | 0.575253 | 4_1:-78077553 | Msa0574520:intron |
| TTGTCTGACGTCTGGTTCGG+AGG | 0.575753 | 4_1:+78076497 | None:intergenic |
| CATACTGCAACTTAATGTAA+GGG | 0.576632 | 4_1:+78077559 | None:intergenic |
| ATACTGCAAATGTATTTGAA+GGG | 0.577180 | 4_1:-78075428 | Msa0574520:three_prime_UTR |
| GTATCATTCCAGACAGCAGT+TGG | 0.577863 | 4_1:+78077328 | None:intergenic |
| GTGATTTCTGAGGACTGGCA+TGG | 0.577904 | 4_1:+78077685 | None:intergenic |
| CCTCTCCAAGGGGTGAAAAG+TGG | 0.578595 | 4_1:-78076467 | Msa0574520:CDS |
| TTCATTTGTATCTACACCTG+AGG | 0.578623 | 4_1:-78080276 | Msa0574520:CDS |
| ACTCTAGAGGATACACAAGA+AGG | 0.578975 | 4_1:-78075801 | Msa0574520:CDS |
| CCAGAACTCACTCCTTCAAG+TGG | 0.579493 | 4_1:+78077163 | None:intergenic |
| GCTGCTAAACATGATCATGA+TGG | 0.580450 | 4_1:+78081806 | None:intergenic |
| TTATTGCTGCTGATCTTAGA+GGG | 0.581530 | 4_1:-78076914 | Msa0574520:CDS |
| CTCTAGAGGATACACAAGAA+GGG | 0.583918 | 4_1:-78075800 | Msa0574520:CDS |
| ACTTGTTCTTATTGAAGCGA+GGG | 0.585320 | 4_1:-78076940 | Msa0574520:CDS |
| ACAAAACTGTCAACCCTCGT+TGG | 0.587051 | 4_1:-78076637 | Msa0574520:CDS |
| CTTGAAGGCCCAAACTGGGA+GGG | 0.587914 | 4_1:+78080889 | None:intergenic |
| GGAATTGCCTTTGGAAGCGG+GGG | 0.588283 | 4_1:-78080245 | Msa0574520:CDS |
| AGAGAATAAGGATAATTGGA+AGG | 0.588891 | 4_1:+78081588 | None:intergenic |
| CAACCATTCGTCATGCCCGA+TGG | 0.589961 | 4_1:+78076969 | None:intergenic |
| CGAACCAGACGTCAGACAAG+TGG | 0.590076 | 4_1:-78076493 | Msa0574520:CDS |
| ATTTGTAGAGGTAGAAGCGG+AGG | 0.594686 | 4_1:-78079706 | Msa0574520:CDS |
| TAAAATAGAAGCAATTTGGG+TGG | 0.594996 | 4_1:-78077128 | Msa0574520:CDS |
| AGGAATTGCCTTTGGAAGCG+GGG | 0.597693 | 4_1:-78080246 | Msa0574520:CDS |
| AATGAATATTCATAATATGG+TGG | 0.598159 | 4_1:+78081860 | None:intergenic |
| ACAAGTGGATACCTCTCCAA+GGG | 0.598171 | 4_1:-78076478 | Msa0574520:CDS |
| CCATTCGTCATGCCCGATGG+TGG | 0.598760 | 4_1:+78076972 | None:intergenic |
| TGCAGTATGGGAATTACCAG+AGG | 0.601026 | 4_1:-78081433 | Msa0574520:intron |
| AAAGAGTGGCAATTCTCTGA+TGG | 0.601133 | 4_1:-78077729 | Msa0574520:CDS |
| GGAGAACCAAGAGGGATCAA+AGG | 0.603156 | 4_1:-78077107 | Msa0574520:intron |
| TAATTTGAACATACCAGCCA+AGG | 0.606696 | 4_1:+78080188 | None:intergenic |
| TCGTATCATAGTAAATACTT+CGG | 0.608202 | 4_1:-78081375 | Msa0574520:intron |
| AAACTGAAACAGCGGCGCCG+AGG | 0.611310 | 4_1:+78079888 | None:intergenic |
| ACAGCAGTTGGAGTAGTAGG+AGG | 0.613903 | 4_1:+78077340 | None:intergenic |
| AATTCTTCTCCATCCCTCAA+CGG | 0.617791 | 4_1:-78075705 | Msa0574520:CDS |
| TTTCTAGGAGTTGCTTCAAG+GGG | 0.619070 | 4_1:-78079794 | Msa0574520:CDS |
| ATCAGCAAAATAAATGAACT+GGG | 0.620106 | 4_1:-78075741 | Msa0574520:CDS |
| ACATGCAAAGTTATGTGGAG+AGG | 0.622013 | 4_1:-78078507 | Msa0574520:CDS |
| AGTGCACATGTAAATTTGGA+AGG | 0.622106 | 4_1:-78077220 | Msa0574520:CDS |
| AATGCTTGTCCCATTTGAGG+GGG | 0.623716 | 4_1:-78078477 | Msa0574520:CDS |
| AGAAAGGTACCCAATTTCTG+TGG | 0.623799 | 4_1:+78081905 | None:intergenic |
| AGTCATACTTCACACTGTCA+GGG | 0.623937 | 4_1:+78079568 | None:intergenic |
| TAAAGACCATGGTGGAACCT+CGG | 0.628622 | 4_1:-78079905 | Msa0574520:CDS |
| AGAAGAAAACTTGAGCGACA+AGG | 0.629014 | 4_1:-78079739 | Msa0574520:CDS |
| GATCCCTTAAGTGATTTCTG+AGG | 0.629927 | 4_1:+78077675 | None:intergenic |
| GACAAGTGGATACCTCTCCA+AGG | 0.630168 | 4_1:-78076479 | Msa0574520:CDS |
| CATTTGCTCAGTCTCCAACT+GGG | 0.632844 | 4_1:+78075770 | None:intergenic |
| GGACTTGCAGACATTTGTAG+AGG | 0.638975 | 4_1:-78079718 | Msa0574520:CDS |
| ACTGGTACAAGGGTCAATCA+GGG | 0.643146 | 4_1:-78077197 | Msa0574520:CDS |
| CCTTGAAGGCCCAAACTGGG+AGG | 0.643279 | 4_1:+78080888 | None:intergenic |
| GTCATACTTCACACTGTCAG+GGG | 0.645119 | 4_1:+78079569 | None:intergenic |
| CATTCACCTATACTTGATGT+GGG | 0.646006 | 4_1:+78076542 | None:intergenic |
| GAGCGAGTTAGAAACTCTAG+AGG | 0.650693 | 4_1:-78075814 | Msa0574520:CDS |
| ACCAGCCAAGGAGAAACACC+AGG | 0.651021 | 4_1:+78080200 | None:intergenic |
| TGACACTTTGGTAAAGACCA+TGG | 0.652545 | 4_1:-78079916 | Msa0574520:CDS |
| CTAAGGTCTGGTCCCAACGA+GGG | 0.653594 | 4_1:+78076624 | None:intergenic |
| TCATACTTCACACTGTCAGG+GGG | 0.655219 | 4_1:+78079570 | None:intergenic |
| ATTTGGGTGGAGAACCAAGA+GGG | 0.655601 | 4_1:-78077115 | Msa0574520:CDS |
| GGATGATTCAACAATTGTGT+GGG | 0.659331 | 4_1:-78078561 | Msa0574520:CDS |
| AAGGTTATCAGCCATAGTAG+AGG | 0.659514 | 4_1:-78081178 | Msa0574520:intron |
| TCCTTTACATGCAATGTCAG+GGG | 0.664800 | 4_1:+78076581 | None:intergenic |
| CAGAACTCACTCCTTCAAGT+GGG | 0.666922 | 4_1:+78077164 | None:intergenic |
| AAATAAAACCTGATCACCAG+AGG | 0.670333 | 4_1:+78080851 | None:intergenic |
| AGGATGATTCAACAATTGTG+TGG | 0.671943 | 4_1:-78078562 | Msa0574520:CDS |
| AAACTTAAAGAAAAGAACAA+AGG | 0.675630 | 4_1:-78076859 | Msa0574520:intron |
| CCAGAGGAAAATACTCGAGG+AGG | 0.676864 | 4_1:-78081417 | Msa0574520:CDS |
| CGATGAGAAGATGAGGCATG+TGG | 0.684411 | 4_1:-78078585 | Msa0574520:intron |
| TTACCAGAGGAAAATACTCG+AGG | 0.685875 | 4_1:-78081420 | Msa0574520:CDS |
| TGAGAAGATGAGGCATGTGG+AGG | 0.692283 | 4_1:-78078582 | Msa0574520:intron |
| TCTAAGGTCTGGTCCCAACG+AGG | 0.697996 | 4_1:+78076623 | None:intergenic |
| CACTTTGGTAAAGACCATGG+TGG | 0.701388 | 4_1:-78079913 | Msa0574520:CDS |
| TTAATCCTAAGCTTTCAACA+AGG | 0.704753 | 4_1:-78081197 | Msa0574520:CDS |
| CATACTTCACACTGTCAGGG+GGG | 0.713851 | 4_1:+78079571 | None:intergenic |
| GCGGCGCCGAGGTTCCACCA+TGG | 0.714667 | 4_1:+78079899 | None:intergenic |
| CAACATTGGAACAATGTGAG+TGG | 0.720711 | 4_1:-78081257 | Msa0574520:CDS |
| CAAGTGGATACCTCTCCAAG+GGG | 0.733533 | 4_1:-78076477 | Msa0574520:CDS |
| ATTTCTGAGGACTGGCATGG+AGG | 0.740443 | 4_1:+78077688 | None:intergenic |
| AGAAACACCAGGCAACTCAG+TGG | 0.743799 | 4_1:+78080211 | None:intergenic |
| AATTTGGGTGGAGAACCAAG+AGG | 0.782070 | 4_1:-78077116 | Msa0574520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAATATAGAATTCTAT+TGG | - | chr4_1:78076607-78076626 | Msa0574520:CDS | 10.0% |
| !! | GATTATATAATCATTTAATA+TGG | - | chr4_1:78079192-78079211 | Msa0574520:intron | 10.0% |
| !! | AGAATTAAAAAAAGTTAAAA+TGG | + | chr4_1:78079538-78079557 | None:intergenic | 10.0% |
| !! | TATAAATATATTAAAAACCT+TGG | + | chr4_1:78079857-78079876 | None:intergenic | 10.0% |
| !! | AGAAATGAATATTCATAATA+TGG | + | chr4_1:78075463-78075482 | None:intergenic | 15.0% |
| !!! | ATAGATACTTTGTTTATTTA+AGG | - | chr4_1:78076525-78076544 | Msa0574520:CDS | 15.0% |
| !! | ATATTAAAATCTCATTTAAG+TGG | + | chr4_1:78076597-78076616 | None:intergenic | 15.0% |
| !! | GTTTATGTAAAAAACAATTA+AGG | + | chr4_1:78078036-78078055 | None:intergenic | 15.0% |
| !! | ACTAAAAAACTTATTTCAAT+CGG | + | chr4_1:78079499-78079518 | None:intergenic | 15.0% |
| !!! | TAATTCTGTTTTTTAGTTAA+AGG | - | chr4_1:78079551-78079570 | Msa0574520:CDS | 15.0% |
| !!! | TATTTCTACAAATTGTTAAA+TGG | + | chr4_1:78081112-78081131 | None:intergenic | 15.0% |
| !! | ACATTATATATATCAGATAA+AGG | - | chr4_1:78081416-78081435 | Msa0574520:CDS | 15.0% |
| !! | GAAAAGAAAAGAAAAAAGAA+AGG | + | chr4_1:78075431-78075450 | None:intergenic | 20.0% |
| !! | AATGAATATTCATAATATGG+TGG | + | chr4_1:78075460-78075479 | None:intergenic | 20.0% |
| !! | AAGCTTAGGATTAAAATAAT+TGG | + | chr4_1:78076114-78076133 | None:intergenic | 20.0% |
| !!! | TGTTTATTTAAGGTCTATTA+TGG | - | chr4_1:78076535-78076554 | Msa0574520:CDS | 20.0% |
| !! | GAATATATATAAGCACTTAA+GGG | + | chr4_1:78076575-78076594 | None:intergenic | 20.0% |
| !! | ATTAACAGTCTTCATATTAA+GGG | - | chr4_1:78076729-78076748 | Msa0574520:intron | 20.0% |
| !! | AGAACTATAAATATGATTAC+TGG | - | chr4_1:78076872-78076891 | Msa0574520:CDS | 20.0% |
| !! | GAATGATTAGATTATAGAAA+AGG | + | chr4_1:78076965-78076984 | None:intergenic | 20.0% |
| !!! | CAATATGTATATATGGTTTT+TGG | - | chr4_1:78077855-78077874 | Msa0574520:intron | 20.0% |
| !! | TGTACATATTTATAAAGGAT+GGG | + | chr4_1:78078188-78078207 | None:intergenic | 20.0% |
| !! | TCAAAAGTTAAATTCATAGA+TGG | + | chr4_1:78078265-78078284 | None:intergenic | 20.0% |
| !!! | ATTTAACTTTTGAAATGCAA+TGG | - | chr4_1:78078272-78078291 | Msa0574520:intron | 20.0% |
| !! | AAATTAATATGGATGCAATA+GGG | - | chr4_1:78078399-78078418 | Msa0574520:intron | 20.0% |
| !!! | GTTTTAGGTGATAATTTAAA+AGG | - | chr4_1:78078529-78078548 | Msa0574520:CDS | 20.0% |
| !!! | ATCATGTTCCTTTTATAAAT+GGG | + | chr4_1:78079062-78079081 | None:intergenic | 20.0% |
| !!! | AATCATGTTCCTTTTATAAA+TGG | + | chr4_1:78079063-78079082 | None:intergenic | 20.0% |
| !! | TATAATCATTTAATATGGAG+AGG | - | chr4_1:78079197-78079216 | Msa0574520:intron | 20.0% |
| !! | ACTTAAAATAGAAGCAATTT+GGG | - | chr4_1:78080186-78080205 | Msa0574520:intron | 20.0% |
| !! | AAACTTAAAGAAAAGAACAA+AGG | - | chr4_1:78080458-78080477 | Msa0574520:intron | 20.0% |
| !! | AATAAAACTTGTAAATCGTA+AGG | + | chr4_1:78080526-78080545 | None:intergenic | 20.0% |
| !! | TTATTTGTTTCATACTTGTA+AGG | - | chr4_1:78080622-78080641 | Msa0574520:CDS | 20.0% |
| !!! | AAAATAATTGAGTTGATGAA+TGG | + | chr4_1:78081301-78081320 | None:intergenic | 20.0% |
| !! | CTAATAACAATGTTAAATAG+TGG | + | chr4_1:78081668-78081687 | None:intergenic | 20.0% |
| ! | AATTTATGAACCACAGAAAT+TGG | - | chr4_1:78075402-78075421 | Msa0574520:three_prime_UTR | 25.0% |
| ! | ATTTATGAACCACAGAAATT+GGG | - | chr4_1:78075403-78075422 | Msa0574520:three_prime_UTR | 25.0% |
| !! | TTTGATGATTCCCAATAATT+TGG | - | chr4_1:78075579-78075598 | Msa0574520:three_prime_UTR | 25.0% |
| ! | TCGTATCATAGTAAATACTT+CGG | - | chr4_1:78075942-78075961 | Msa0574520:intron | 25.0% |
| ! | TAAAATGCCAAAAAGACAAT+TGG | + | chr4_1:78075981-78076000 | None:intergenic | 25.0% |
| ! | ATCTATTGTTGTCACAAATA+TGG | - | chr4_1:78076087-78076106 | Msa0574520:intron | 25.0% |
| ! | TCAATACTCACTATAAATCT+TGG | + | chr4_1:78076267-78076286 | None:intergenic | 25.0% |
| !!! | TGAGTATTGATCATTTTCTT+TGG | - | chr4_1:78076277-78076296 | Msa0574520:intron | 25.0% |
| !!! | ATTGGATGTTCAAACTTTTT+TGG | + | chr4_1:78076326-78076345 | None:intergenic | 25.0% |
| ! | TTCAGCAGGATTTATTAAAT+TGG | + | chr4_1:78076344-78076363 | None:intergenic | 25.0% |
| ! | GGAATATATATAAGCACTTA+AGG | + | chr4_1:78076576-78076595 | None:intergenic | 25.0% |
| ! | GATTAACAGTCTTCATATTA+AGG | - | chr4_1:78076728-78076747 | Msa0574520:intron | 25.0% |
| !!! | GATACATTCTTTATTTTCTG+AGG | - | chr4_1:78076929-78076948 | Msa0574520:CDS | 25.0% |
| ! | AACTTGATGTCTATAATTTC+TGG | - | chr4_1:78077169-78077188 | Msa0574520:CDS | 25.0% |
| !! | GACATGATTTTTATAGACAA+CGG | + | chr4_1:78077221-78077240 | None:intergenic | 25.0% |
| ! | AGTAAAAAGTTTAACCTGTA+TGG | + | chr4_1:78077382-78077401 | None:intergenic | 25.0% |
| !! | TAAACTTTTTACTGACACTT+TGG | - | chr4_1:78077389-78077408 | Msa0574520:intron | 25.0% |
| ! | ATATATGTTTCAGTGATTTC+TGG | - | chr4_1:78077492-78077511 | Msa0574520:intron | 25.0% |
| !!! | ATGGTTTTACATGATAATAC+AGG | - | chr4_1:78077696-78077715 | Msa0574520:CDS | 25.0% |
| ! | CTAGCAATAGGATTATTAAT+CGG | - | chr4_1:78077828-78077847 | Msa0574520:intron | 25.0% |
| !! | AAATGCTTAATTTGAAGATC+CGG | + | chr4_1:78077997-78078016 | None:intergenic | 25.0% |
| ! | TTTAGCAAAGTCAAAGATTA+AGG | + | chr4_1:78078087-78078106 | None:intergenic | 25.0% |
| ! | GTACATATTTATAAAGGATG+GGG | + | chr4_1:78078187-78078206 | None:intergenic | 25.0% |
| ! | GTGTACATATTTATAAAGGA+TGG | + | chr4_1:78078189-78078208 | None:intergenic | 25.0% |
| ! | TAAAACGTCTAATTTGAACA+CGG | - | chr4_1:78078295-78078314 | Msa0574520:intron | 25.0% |
| !! | TAATTTGTCGTGAAGTTTAT+AGG | + | chr4_1:78078385-78078404 | None:intergenic | 25.0% |
| ! | AACTTCACGACAAATTAATA+TGG | - | chr4_1:78078388-78078407 | Msa0574520:intron | 25.0% |
| ! | CAAATTAATATGGATGCAAT+AGG | - | chr4_1:78078398-78078417 | Msa0574520:intron | 25.0% |
| ! | AATTAATATGGATGCAATAG+GGG | - | chr4_1:78078400-78078419 | Msa0574520:intron | 25.0% |
| ! | ATTAAATGAAAATCCAACAC+TGG | + | chr4_1:78078949-78078968 | None:intergenic | 25.0% |
| ! | TTCAAATCAAGAAAGAAGAA+CGG | + | chr4_1:78078986-78079005 | None:intergenic | 25.0% |
| ! | GACAGATATTCAAATTAAGT+TGG | - | chr4_1:78079122-78079141 | Msa0574520:intron | 25.0% |
| !!! | TGTTTTTTTTTTTTCGAACG+TGG | - | chr4_1:78079397-78079416 | Msa0574520:intron | 25.0% |
| !!! | GTTTTTTTTTTTTCGAACGT+GGG | - | chr4_1:78079398-78079417 | Msa0574520:intron | 25.0% |
| ! | TCAAATCTTCTTTCAAAAAC+TGG | - | chr4_1:78079666-78079685 | Msa0574520:CDS | 25.0% |
| ! | AGATTATCAATAACAGAATC+AGG | + | chr4_1:78079924-78079943 | None:intergenic | 25.0% |
| !! | TGCTTTAGTGAAGAAATTTT+TGG | - | chr4_1:78080058-78080077 | Msa0574520:intron | 25.0% |
| !!! | ATTTTTGGAGATGAAAACAT+TGG | - | chr4_1:78080073-78080092 | Msa0574520:intron | 25.0% |
| ! | GACTTAAAATAGAAGCAATT+TGG | - | chr4_1:78080185-78080204 | Msa0574520:intron | 25.0% |
| ! | CATAAGAAGATATAATGTGA+TGG | + | chr4_1:78080550-78080569 | None:intergenic | 25.0% |
| ! | CATCACATTATATCTTCTTA+TGG | - | chr4_1:78080548-78080567 | Msa0574520:intron | 25.0% |
| ! | ATTGTATTCGTTGTCTTAAA+AGG | - | chr4_1:78081056-78081075 | Msa0574520:intron | 25.0% |
| ! | ACAATTTGTAGAAATATCTC+TGG | - | chr4_1:78081116-78081135 | Msa0574520:intron | 25.0% |
| ! | TATGCATAGAAAAATGAACA+GGG | + | chr4_1:78081158-78081177 | None:intergenic | 25.0% |
| ! | ACGTAAATTTATTCTACCAA+TGG | + | chr4_1:78081258-78081277 | None:intergenic | 25.0% |
| ! | TATCAGCAAAATAAATGAAC+TGG | - | chr4_1:78081575-78081594 | Msa0574520:CDS | 25.0% |
| ! | ATCAGCAAAATAAATGAACT+GGG | - | chr4_1:78081576-78081595 | Msa0574520:CDS | 25.0% |
| ! | CTATATCATTATACAGATTG+TGG | + | chr4_1:78081818-78081837 | None:intergenic | 25.0% |
| ! | GTCATTATTACAATCATCAA+TGG | + | chr4_1:78081866-78081885 | None:intergenic | 25.0% |
| ! | TATACTGCAAATGTATTTGA+AGG | - | chr4_1:78081888-78081907 | Msa0574520:five_prime_UTR | 25.0% |
| ! | ATACTGCAAATGTATTTGAA+GGG | - | chr4_1:78081889-78081908 | Msa0574520:five_prime_UTR | 25.0% |
| ! | AGTGTGAATGTATTATCAAT+TGG | - | chr4_1:78081925-78081944 | Msa0574520:five_prime_UTR | 25.0% |
| GTGGTTCATAAATTCTTCTT+GGG | + | chr4_1:78075396-78075415 | None:intergenic | 30.0% | |
| TGTGGTTCATAAATTCTTCT+TGG | + | chr4_1:78075397-78075416 | None:intergenic | 30.0% | |
| ATTCATAATATGGTGGTAGA+AGG | + | chr4_1:78075453-78075472 | None:intergenic | 30.0% | |
| !! | ATCATGATGGATCGTAAAAA+AGG | + | chr4_1:78075501-78075520 | None:intergenic | 30.0% |
| GAAGCTTCTTCCAAATTATT+GGG | + | chr4_1:78075592-78075611 | None:intergenic | 30.0% | |
| TGAAGCTTCTTCCAAATTAT+TGG | + | chr4_1:78075593-78075612 | None:intergenic | 30.0% | |
| TTTGCTTCACTTTCACTAAT+TGG | + | chr4_1:78075630-78075649 | None:intergenic | 30.0% | |
| ! | TTATTCTCGTTTTCATTGCT+TGG | - | chr4_1:78075671-78075690 | Msa0574520:three_prime_UTR | 30.0% |
| TTGCTTGGTTTATTCACAAA+TGG | - | chr4_1:78075686-78075705 | Msa0574520:exon | 30.0% | |
| AGAGAATAAGGATAATTGGA+AGG | + | chr4_1:78075732-78075751 | None:intergenic | 30.0% | |
| GCAAAGAGAATAAGGATAAT+TGG | + | chr4_1:78075736-78075755 | None:intergenic | 30.0% | |
| !!! | TCTTTGTTGTTTTTGCAGTA+TGG | - | chr4_1:78075871-78075890 | Msa0574520:CDS | 30.0% |
| !!! | CTTTGTTGTTTTTGCAGTAT+GGG | - | chr4_1:78075872-78075891 | Msa0574520:CDS | 30.0% |
| ! | TTTCACTCCAATTGTCTTTT+TGG | - | chr4_1:78075971-78075990 | Msa0574520:intron | 30.0% |
| TTAATCCTAAGCTTTCAACA+AGG | - | chr4_1:78076120-78076139 | Msa0574520:intron | 30.0% | |
| ! | TTTCTTTTGTGTCTCAGAAA+CGG | - | chr4_1:78076226-78076245 | Msa0574520:intron | 30.0% |
| !! | GTATTGATCATTTTCTTTGG+TGG | - | chr4_1:78076280-78076299 | Msa0574520:intron | 30.0% |
| ACTAAAGAAATAATTTCCGC+AGG | - | chr4_1:78076368-78076387 | Msa0574520:CDS | 30.0% | |
| AAGACTGTTAATCACAATTC+TGG | + | chr4_1:78076721-78076740 | None:intergenic | 30.0% | |
| GCAGTTTGAATTAAGTGATT+AGG | - | chr4_1:78077193-78077212 | Msa0574520:CDS | 30.0% | |
| AAAAGTTTAACCTGTATGGA+AGG | + | chr4_1:78077378-78077397 | None:intergenic | 30.0% | |
| ! | TTTCTGGAAACAAACTTTCT+AGG | - | chr4_1:78077508-78077527 | Msa0574520:intron | 30.0% |
| ATGGGATACGACATTTAATA+TGG | - | chr4_1:78077677-78077696 | Msa0574520:CDS | 30.0% | |
| CACACAAAAACAAACATCTA+TGG | + | chr4_1:78077808-78077827 | None:intergenic | 30.0% | |
| !!! | GTTTTAAAAACACGATGACA+TGG | + | chr4_1:78077960-78077979 | None:intergenic | 30.0% |
| !!! | TGTCATCGTGTTTTTAAAAC+TGG | - | chr4_1:78077960-78077979 | Msa0574520:intron | 30.0% |
| !!! | GTGTTTTTAAAACTGGTTAC+TGG | - | chr4_1:78077967-78077986 | Msa0574520:intron | 30.0% |
| AAAGTCAAAGATTAAGGAAG+GGG | + | chr4_1:78078081-78078100 | None:intergenic | 30.0% | |
| CAAAGTCAAAGATTAAGGAA+GGG | + | chr4_1:78078082-78078101 | None:intergenic | 30.0% | |
| TATTTATAAAGGATGGGGAA+AGG | + | chr4_1:78078182-78078201 | None:intergenic | 30.0% | |
| GGTGGTGTACATATTTATAA+AGG | + | chr4_1:78078193-78078212 | None:intergenic | 30.0% | |
| ATTTGAATCATGTGACACTT+TGG | + | chr4_1:78078242-78078261 | None:intergenic | 30.0% | |
| !!! | GGATAACATTTTTGGAATAG+AGG | - | chr4_1:78078468-78078487 | Msa0574520:CDS | 30.0% |
| !!! | CATTTTTGGAATAGAGGTAA+TGG | - | chr4_1:78078474-78078493 | Msa0574520:CDS | 30.0% |
| AATATTGTTGAATCCTTGTC+TGG | - | chr4_1:78078503-78078522 | Msa0574520:CDS | 30.0% | |
| AAAAACTGAACTTGTATAGC+CGG | - | chr4_1:78078558-78078577 | Msa0574520:CDS | 30.0% | |
| ACGACGGTATTAAAAATAAG+AGG | + | chr4_1:78078664-78078683 | None:intergenic | 30.0% | |
| !!! | TCTTATTTTTAATACCGTCG+TGG | - | chr4_1:78078663-78078682 | Msa0574520:intron | 30.0% |
| TCAAATCAAGAAAGAAGAAC+GGG | + | chr4_1:78078985-78079004 | None:intergenic | 30.0% | |
| GGTAGATGAAAAATCATAAG+TGG | - | chr4_1:78079143-78079162 | Msa0574520:intron | 30.0% | |
| !! | TTTCACGTTGATAATCTTTC+TGG | - | chr4_1:78079225-78079244 | Msa0574520:intron | 30.0% |
| ! | AAAGTATCTGGAACATCAAA+AGG | + | chr4_1:78079357-78079376 | None:intergenic | 30.0% |
| !! | AATTATGCCATGAAAGTATC+TGG | + | chr4_1:78079369-78079388 | None:intergenic | 30.0% |
| !! | ACTACTTTCATTTTCAAGAG+CGG | + | chr4_1:78079466-78079485 | None:intergenic | 30.0% |
| AAACTTATTTCAATCGGAAG+AGG | + | chr4_1:78079493-78079512 | None:intergenic | 30.0% | |
| ATCTTCTTTCAAAAACTGGA+AGG | - | chr4_1:78079670-78079689 | Msa0574520:CDS | 30.0% | |
| GAAACTTAAGATAACTGTTG+TGG | - | chr4_1:78079692-78079711 | Msa0574520:CDS | 30.0% | |
| CATACTGCAACTTAATGTAA+GGG | + | chr4_1:78079761-78079780 | None:intergenic | 30.0% | |
| !! | ATATCTGTTTGACTCGTTTT+AGG | - | chr4_1:78079803-78079822 | Msa0574520:CDS | 30.0% |
| ! | CTGTTATTGATAATCTGTTC+AGG | - | chr4_1:78079928-78079947 | Msa0574520:CDS | 30.0% |
| ! | CACTAAAGCATTTCACAATT+AGG | + | chr4_1:78080048-78080067 | None:intergenic | 30.0% |
| TAAAATAGAAGCAATTTGGG+TGG | - | chr4_1:78080189-78080208 | Msa0574520:intron | 30.0% | |
| ! | CAAAGGTATGCTTCTTTAAT+AGG | - | chr4_1:78080227-78080246 | Msa0574520:CDS | 30.0% |
| !! | CTAAGCAGAATTTTTAACTC+TGG | - | chr4_1:78080276-78080295 | Msa0574520:CDS | 30.0% |
| TTGTAAATCGTAAGGATGTT+TGG | + | chr4_1:78080518-78080537 | None:intergenic | 30.0% | |
| !! | ATGGTGTTATACACTTATAC+TGG | - | chr4_1:78080567-78080586 | Msa0574520:intron | 30.0% |
| TTGTAAGGCTTAATTTACTG+TGG | - | chr4_1:78080637-78080656 | Msa0574520:CDS | 30.0% | |
| TAATTTACTGTGGCATTATC+TGG | - | chr4_1:78080647-78080666 | Msa0574520:CDS | 30.0% | |
| TGGTGTAATTTAGTCAAAGA+AGG | + | chr4_1:78080943-78080962 | None:intergenic | 30.0% | |
| ! | ATTGTGTATCAGTGTGTTTT+GGG | + | chr4_1:78080998-78081017 | None:intergenic | 30.0% |
| ! | TATTGTGTATCAGTGTGTTT+TGG | + | chr4_1:78080999-78081018 | None:intergenic | 30.0% |
| CTGATACACAATATAACCTT+TGG | - | chr4_1:78081006-78081025 | Msa0574520:intron | 30.0% | |
| GTATGCATAGAAAAATGAAC+AGG | + | chr4_1:78081159-78081178 | None:intergenic | 30.0% | |
| ! | TTGGTTTATATGCCATTTCT+TGG | - | chr4_1:78081210-78081229 | Msa0574520:CDS | 30.0% |
| ! | TGGTTTATATGCCATTTCTT+GGG | - | chr4_1:78081211-78081230 | Msa0574520:CDS | 30.0% |
| TTCTCTTATTGCTAAACCAT+TGG | - | chr4_1:78081239-78081258 | Msa0574520:CDS | 30.0% | |
| !! | ATGGATTGTTTCTATCAGAA+AGG | + | chr4_1:78081282-78081301 | None:intergenic | 30.0% |
| TCAACAGTATGTGAGAAAAA+TGG | + | chr4_1:78081390-78081409 | None:intergenic | 30.0% | |
| AGGAGATGACAAAAAAGATT+CGG | - | chr4_1:78081436-78081455 | Msa0574520:intron | 30.0% | |
| ! | AAAGATTCGGTCTTTAATAG+TGG | - | chr4_1:78081449-78081468 | Msa0574520:intron | 30.0% |
| !! | TTTAATAGTGGATGGAAATC+TGG | - | chr4_1:78081461-78081480 | Msa0574520:intron | 30.0% |
| GAGAAGAATTTATGATCTCT+TGG | + | chr4_1:78081602-78081621 | None:intergenic | 30.0% | |
| TATTTGAAGGGAATTGAGTA+AGG | - | chr4_1:78081901-78081920 | Msa0574520:five_prime_UTR | 30.0% | |
| TGAAAGTGAAGCAAACTTCA+CGG | - | chr4_1:78075635-78075654 | Msa0574520:three_prime_UTR | 35.0% | |
| AAGGATAATTGGAAGGCAAT+TGG | + | chr4_1:78075725-78075744 | None:intergenic | 35.0% | |
| GTGTAGATGCAAAGAGAATA+AGG | + | chr4_1:78075744-78075763 | None:intergenic | 35.0% | |
| GATAACCTTGTTGAAAGCTT+AGG | + | chr4_1:78076128-78076147 | None:intergenic | 35.0% | |
| CAGAAATTTCACCTCTACTA+TGG | + | chr4_1:78076153-78076172 | None:intergenic | 35.0% | |
| !!! | TCTGTCTTTTTTGTGTGAGT+CGG | - | chr4_1:78076169-78076188 | Msa0574520:intron | 35.0% |
| ! | TTTCTTTAGTTCAGTTCAGC+AGG | + | chr4_1:78076358-78076377 | None:intergenic | 35.0% |
| AGAAATAATTTCCGCAGGAA+AGG | - | chr4_1:78076373-78076392 | Msa0574520:CDS | 35.0% | |
| GAAATAATTTCCGCAGGAAA+GGG | - | chr4_1:78076374-78076393 | Msa0574520:CDS | 35.0% | |
| AAATAAAACCTGATCACCAG+AGG | + | chr4_1:78076469-78076488 | None:intergenic | 35.0% | |
| !! | TCCTGAAAATGGGTTTTGAT+TGG | - | chr4_1:78076643-78076662 | Msa0574520:CDS | 35.0% |
| !!! | CCTGAAAATGGGTTTTGATT+GGG | - | chr4_1:78076644-78076663 | Msa0574520:CDS | 35.0% |
| ! | GAATGAGATGAGCATTTTGA+TGG | - | chr4_1:78076671-78076690 | Msa0574520:intron | 35.0% |
| ! | CTAAGGAGCATAAATGCAAA+GGG | + | chr4_1:78076774-78076793 | None:intergenic | 35.0% |
| ! | TCTAAGGAGCATAAATGCAA+AGG | + | chr4_1:78076775-78076794 | None:intergenic | 35.0% |
| ! | ATAGCTCTATTGCATGTCTA+AGG | + | chr4_1:78076791-78076810 | None:intergenic | 35.0% |
| ! | AGTGCTTTTCCATCTAGTAT+TGG | + | chr4_1:78077015-78077034 | None:intergenic | 35.0% |
| TTCATTTGTATCTACACCTG+AGG | - | chr4_1:78077041-78077060 | Msa0574520:intron | 35.0% | |
| GTTAGAATAGGAATTGCCTT+TGG | - | chr4_1:78077063-78077082 | Msa0574520:intron | 35.0% | |
| TAATTTGAACATACCAGCCA+AGG | + | chr4_1:78077132-78077151 | None:intergenic | 35.0% | |
| TTCCAAGAATGAATGAGCAT+GGG | + | chr4_1:78077263-78077282 | None:intergenic | 35.0% | |
| GAAAGATGCTTGAAACATCA+AGG | + | chr4_1:78077290-78077309 | None:intergenic | 35.0% | |
| ATAGTAGTTACCTTCCATAC+AGG | - | chr4_1:78077365-78077384 | Msa0574520:CDS | 35.0% | |
| TACTTCCTTAAATCAACTGC+AGG | + | chr4_1:78077456-78077475 | None:intergenic | 35.0% | |
| ! | GATTTAAGGAAGTATGCTGT+TGG | - | chr4_1:78077462-78077481 | Msa0574520:intron | 35.0% |
| CAACAAAATGGCACAAGTAA+TGG | - | chr4_1:78077549-78077568 | Msa0574520:intron | 35.0% | |
| !!! | TTTTGGTTCAACTCCAAGAT+GGG | - | chr4_1:78077659-78077678 | Msa0574520:CDS | 35.0% |
| TTAAATGTCGTATCCCATCT+TGG | + | chr4_1:78077675-78077694 | None:intergenic | 35.0% | |
| CCTTAATTTCACAAGATGCT+AGG | + | chr4_1:78077776-78077795 | None:intergenic | 35.0% | |
| CCTAGCATCTTGTGAAATTA+AGG | - | chr4_1:78077773-78077792 | Msa0574520:intron | 35.0% | |
| !! | TGTTTTTGTGTGCTAGCAAT+AGG | - | chr4_1:78077816-78077835 | Msa0574520:intron | 35.0% |
| CGGCTGTCAATATGTATATA+TGG | - | chr4_1:78077848-78077867 | Msa0574520:intron | 35.0% | |
| !! | AAAACTGGTTACTGGTTTAC+CGG | - | chr4_1:78077975-78077994 | Msa0574520:intron | 35.0% |
| !! | GTGAGAGTTATTTTGCAGAT+AGG | + | chr4_1:78078058-78078077 | None:intergenic | 35.0% |
| AAGTCAAAGATTAAGGAAGG+GGG | + | chr4_1:78078080-78078099 | None:intergenic | 35.0% | |
| GCAAAGTCAAAGATTAAGGA+AGG | + | chr4_1:78078083-78078102 | None:intergenic | 35.0% | |
| TTGGCTTAGATGATTGTAGT+GGG | + | chr4_1:78078156-78078175 | None:intergenic | 35.0% | |
| ATGTGACACTTTGGATCTAT+AGG | + | chr4_1:78078233-78078252 | None:intergenic | 35.0% | |
| ! | GGGAAGTTTTTGTGAATTCA+TGG | - | chr4_1:78078420-78078439 | Msa0574520:intron | 35.0% |
| !!! | ATCCTTGTCTGGTTTGTTTT+AGG | - | chr4_1:78078514-78078533 | Msa0574520:CDS | 35.0% |
| TATATGAAGCTTTACCACGA+CGG | + | chr4_1:78078680-78078699 | None:intergenic | 35.0% | |
| TCTCATCGACATACAGAAAT+AGG | + | chr4_1:78078720-78078739 | None:intergenic | 35.0% | |
| AGGATGATTCAACAATTGTG+TGG | - | chr4_1:78078755-78078774 | Msa0574520:intron | 35.0% | |
| GGATGATTCAACAATTGTGT+GGG | - | chr4_1:78078756-78078775 | Msa0574520:intron | 35.0% | |
| !! | TTTGCTATTACACCAGAATC+AGG | + | chr4_1:78078790-78078809 | None:intergenic | 35.0% |
| GCAAAACATGCAAAGTTATG+TGG | - | chr4_1:78078805-78078824 | Msa0574520:intron | 35.0% | |
| ! | ATATTGTACCTCTGCTGATT+TGG | + | chr4_1:78078866-78078885 | None:intergenic | 35.0% |
| GTCAAGCTTTCTTTGCTTTA+TGG | - | chr4_1:78078896-78078915 | Msa0574520:intron | 35.0% | |
| AAGCTTTCTTTGCTTTATGG+TGG | - | chr4_1:78078899-78078918 | Msa0574520:intron | 35.0% | |
| TTATCTTACATTGCCAGTGT+TGG | - | chr4_1:78078933-78078952 | Msa0574520:intron | 35.0% | |
| CTTGCATGCCCATTTATAAA+AGG | - | chr4_1:78079051-78079070 | Msa0574520:intron | 35.0% | |
| TTTGCAAGTTGTATCTGCAA+TGG | - | chr4_1:78079255-78079274 | Msa0574520:intron | 35.0% | |
| TGATGTTCCAGATACTTTCA+TGG | - | chr4_1:78079359-78079378 | Msa0574520:intron | 35.0% | |
| TGAGAATTGTAGTGAAAGAG+TGG | - | chr4_1:78079574-78079593 | Msa0574520:CDS | 35.0% | |
| AGTCCTCAGAAATCACTTAA+GGG | - | chr4_1:78079639-78079658 | Msa0574520:CDS | 35.0% | |
| CTTGATGCAAAAGACAGATT+TGG | - | chr4_1:78079726-78079745 | Msa0574520:CDS | 35.0% | |
| CCATACTGCAACTTAATGTA+AGG | + | chr4_1:78079762-78079781 | None:intergenic | 35.0% | |
| ! | CCTTACATTAAGTTGCAGTA+TGG | - | chr4_1:78079759-78079778 | Msa0574520:CDS | 35.0% |
| ! | CATTAAGTTGCAGTATGGAA+AGG | - | chr4_1:78079764-78079783 | Msa0574520:CDS | 35.0% |
| ! | TGTCATGTATTGATGAACCA+AGG | - | chr4_1:78079837-78079856 | Msa0574520:CDS | 35.0% |
| !! | TGTCTGGAATGATACTTTTG+AGG | - | chr4_1:78079997-78080016 | Msa0574520:intron | 35.0% |
| ! | TTTGAGGTAGATGAGAATAG+TGG | - | chr4_1:78080013-78080032 | Msa0574520:intron | 35.0% |
| ! | TGGTAGTGCACATGTAAATT+TGG | - | chr4_1:78080093-78080112 | Msa0574520:intron | 35.0% |
| AGTGCACATGTAAATTTGGA+AGG | - | chr4_1:78080097-78080116 | Msa0574520:intron | 35.0% | |
| ACATGTAAATTTGGAAGGAC+TGG | - | chr4_1:78080102-78080121 | Msa0574520:intron | 35.0% | |
| ! | AACTTGTTCTTATTGAAGCG+AGG | - | chr4_1:78080376-78080395 | Msa0574520:intron | 35.0% |
| ACTTGTTCTTATTGAAGCGA+GGG | - | chr4_1:78080377-78080396 | Msa0574520:intron | 35.0% | |
| TTATTGCTGCTGATCTTAGA+GGG | - | chr4_1:78080403-78080422 | Msa0574520:intron | 35.0% | |
| ! | ATGTGGGTAGTAAAGCATTA+TGG | + | chr4_1:78080762-78080781 | None:intergenic | 35.0% |
| TTACTACCCACATCAAGTAT+AGG | - | chr4_1:78080769-78080788 | Msa0574520:intron | 35.0% | |
| CATTCACCTATACTTGATGT+GGG | + | chr4_1:78080778-78080797 | None:intergenic | 35.0% | |
| ACATTCACCTATACTTGATG+TGG | + | chr4_1:78080779-78080798 | None:intergenic | 35.0% | |
| !! | CTTTTCTTGTGATTTGGATG+TGG | + | chr4_1:78080882-78080901 | None:intergenic | 35.0% |
| ! | CTGGAACTTTTCTTGTGATT+TGG | + | chr4_1:78080888-78080907 | None:intergenic | 35.0% |
| AGATGCAAGATAATCTTACC+TGG | + | chr4_1:78080975-78080994 | None:intergenic | 35.0% | |
| ! | TTCAAGAATTTTGAGCCAGT+TGG | - | chr4_1:78081191-78081210 | Msa0574520:CDS | 35.0% |
| GAAATGGCATATAAACCAAC+TGG | + | chr4_1:78081209-78081228 | None:intergenic | 35.0% | |
| ! | GGTTTATATGCCATTTCTTG+GGG | - | chr4_1:78081212-78081231 | Msa0574520:CDS | 35.0% |
| ! | GTTTATATGCCATTTCTTGG+GGG | - | chr4_1:78081213-78081232 | Msa0574520:CDS | 35.0% |
| ! | ATTCGGTCTTTAATAGTGGA+TGG | - | chr4_1:78081453-78081472 | Msa0574520:intron | 35.0% |
| ATAGTGGTATGACACTAATC+AGG | + | chr4_1:78081652-78081671 | None:intergenic | 35.0% | |
| TCACGTAGTGTTTGTAAGAA+TGG | - | chr4_1:78081746-78081765 | Msa0574520:CDS | 35.0% | |
| !! | AGAAAGGTACCCAATTTCTG+TGG | + | chr4_1:78075415-78075434 | None:intergenic | 40.0% |
| GCTGCTAAACATGATCATGA+TGG | + | chr4_1:78075514-78075533 | None:intergenic | 40.0% | |
| TTACCAGAGGAAAATACTCG+AGG | - | chr4_1:78075897-78075916 | Msa0574520:intron | 40.0% | |
| AGGAGGACTTGAACAAGAAA+TGG | - | chr4_1:78075917-78075936 | Msa0574520:intron | 40.0% | |
| ATTGTAGCCTGTCACAACAT+TGG | - | chr4_1:78076046-78076065 | Msa0574520:intron | 40.0% | |
| CATTGTTCCAATGTTGTGAC+AGG | + | chr4_1:78076056-78076075 | None:intergenic | 40.0% | |
| CAACATTGGAACAATGTGAG+TGG | - | chr4_1:78076060-78076079 | Msa0574520:intron | 40.0% | |
| AAGGTTATCAGCCATAGTAG+AGG | - | chr4_1:78076139-78076158 | Msa0574520:intron | 40.0% | |
| !!! | GAAGTGCTGGAATTTTCACT+TGG | - | chr4_1:78076399-78076418 | Msa0574520:CDS | 40.0% |
| TTGACCATCTAATCCCTTGA+AGG | + | chr4_1:78076446-78076465 | None:intergenic | 40.0% | |
| ! | CCCAATCAAAACCCATTTTC+AGG | + | chr4_1:78076647-78076666 | None:intergenic | 40.0% |
| GTTGTGACACCAATACTAGA+TGG | - | chr4_1:78077003-78077022 | Msa0574520:intron | 40.0% | |
| TCTACACCTGAGGTTAGAAT+AGG | - | chr4_1:78077051-78077070 | Msa0574520:intron | 40.0% | |
| GCAATTCCTATTCTAACCTC+AGG | + | chr4_1:78077060-78077079 | None:intergenic | 40.0% | |
| ! | ATAGGAATTGCCTTTGGAAG+CGG | - | chr4_1:78077069-78077088 | Msa0574520:intron | 40.0% |
| GTTCCAAGAATGAATGAGCA+TGG | + | chr4_1:78077264-78077283 | None:intergenic | 40.0% | |
| ACATCATATGACACAGCACT+GGG | + | chr4_1:78077336-78077355 | None:intergenic | 40.0% | |
| AACATCATATGACACAGCAC+TGG | + | chr4_1:78077337-78077356 | None:intergenic | 40.0% | |
| TGACACTTTGGTAAAGACCA+TGG | - | chr4_1:78077401-78077420 | Msa0574520:intron | 40.0% | |
| ! | GTTTGCCTGCAGTTGATTTA+AGG | - | chr4_1:78077448-78077467 | Msa0574520:intron | 40.0% |
| ! | TTAAGGAAGTATGCTGTTGG+AGG | - | chr4_1:78077465-78077484 | Msa0574520:intron | 40.0% |
| ! | ACTTTCTAGGAGTTGCTTCA+AGG | - | chr4_1:78077521-78077540 | Msa0574520:intron | 40.0% |
| ! | CTTTCTAGGAGTTGCTTCAA+GGG | - | chr4_1:78077522-78077541 | Msa0574520:intron | 40.0% |
| ! | TTTCTAGGAGTTGCTTCAAG+GGG | - | chr4_1:78077523-78077542 | Msa0574520:intron | 40.0% |
| AGAAGAAAACTTGAGCGACA+AGG | - | chr4_1:78077578-78077597 | Msa0574520:CDS | 40.0% | |
| GACATTTGTAGAGGTAGAAG+CGG | - | chr4_1:78077608-78077627 | Msa0574520:CDS | 40.0% | |
| !!! | GTTTTGGTTCAACTCCAAGA+TGG | - | chr4_1:78077658-78077677 | Msa0574520:CDS | 40.0% |
| AGTCATACTTCACACTGTCA+GGG | + | chr4_1:78077752-78077771 | None:intergenic | 40.0% | |
| TAGTCATACTTCACACTGTC+AGG | + | chr4_1:78077753-78077772 | None:intergenic | 40.0% | |
| TGGCTTAGATGATTGTAGTG+GGG | + | chr4_1:78078155-78078174 | None:intergenic | 40.0% | |
| ! | GTTGGCTTAGATGATTGTAG+TGG | + | chr4_1:78078157-78078176 | None:intergenic | 40.0% |
| TGTCGTGAAGTTTATAGGTG+AGG | + | chr4_1:78078380-78078399 | None:intergenic | 40.0% | |
| ! | ATGGCAACGATGAGTTTTTC+TGG | - | chr4_1:78078439-78078458 | Msa0574520:intron | 40.0% |
| ! | TGGCAACGATGAGTTTTTCT+GGG | - | chr4_1:78078440-78078459 | Msa0574520:intron | 40.0% |
| ! | GGGCAAGAGGATAACATTTT+TGG | - | chr4_1:78078460-78078479 | Msa0574520:intron | 40.0% |
| CACCTAAAACAAACCAGACA+AGG | + | chr4_1:78078519-78078538 | None:intergenic | 40.0% | |
| TGTATGTCGATGAGAAGATG+AGG | - | chr4_1:78078725-78078744 | Msa0574520:intron | 40.0% | |
| TCAACAATTGTGTGGGCAAT+AGG | - | chr4_1:78078763-78078782 | Msa0574520:intron | 40.0% | |
| CAACAATTGTGTGGGCAATA+GGG | - | chr4_1:78078764-78078783 | Msa0574520:intron | 40.0% | |
| ACATGCAAAGTTATGTGGAG+AGG | - | chr4_1:78078810-78078829 | Msa0574520:intron | 40.0% | |
| TGAAATGCTTGTCCCATTTG+AGG | - | chr4_1:78078837-78078856 | Msa0574520:intron | 40.0% | |
| GAAATGCTTGTCCCATTTGA+GGG | - | chr4_1:78078838-78078857 | Msa0574520:intron | 40.0% | |
| AAATGCTTGTCCCATTTGAG+GGG | - | chr4_1:78078839-78078858 | Msa0574520:intron | 40.0% | |
| GCAAAGAAAGCTTGACAGAT+GGG | + | chr4_1:78078892-78078911 | None:intergenic | 40.0% | |
| AGCAAAGAAAGCTTGACAGA+TGG | + | chr4_1:78078893-78078912 | None:intergenic | 40.0% | |
| !! | GCTTTATGGTGGATATAGCT+TGG | - | chr4_1:78078910-78078929 | Msa0574520:intron | 40.0% |
| GGAACATGATTATACCACCT+TGG | - | chr4_1:78079072-78079091 | Msa0574520:intron | 40.0% | |
| ! | AAAGCTCTGATGTCATGTCA+AGG | - | chr4_1:78079100-78079119 | Msa0574520:intron | 40.0% |
| ACGATAAACTCATTCGTCGT+AGG | + | chr4_1:78079292-78079311 | None:intergenic | 40.0% | |
| AAAGAGTGGCAATTCTCTGA+TGG | - | chr4_1:78079588-78079607 | Msa0574520:CDS | 40.0% | |
| ! | CTTAAGTGATTTCTGAGGAC+TGG | + | chr4_1:78079640-78079659 | None:intergenic | 40.0% |
| CAGTCCTCAGAAATCACTTA+AGG | - | chr4_1:78079638-78079657 | Msa0574520:CDS | 40.0% | |
| GATCCCTTAAGTGATTTCTG+AGG | + | chr4_1:78079645-78079664 | None:intergenic | 40.0% | |
| GATAACTGTTGTGGAAGCAA+AGG | - | chr4_1:78079701-78079720 | Msa0574520:CDS | 40.0% | |
| ! | AATTTGGAAGGACTGGTACA+AGG | - | chr4_1:78080109-78080128 | Msa0574520:intron | 40.0% |
| ! | ATTTGGAAGGACTGGTACAA+GGG | - | chr4_1:78080110-78080129 | Msa0574520:intron | 40.0% |
| GTGTCCATTTCAAAGGAGTA+GGG | + | chr4_1:78080320-78080339 | None:intergenic | 40.0% | |
| TGTGTCCATTTCAAAGGAGT+AGG | + | chr4_1:78080321-78080340 | None:intergenic | 40.0% | |
| !! | TACTCCTTTGAAATGGACAC+AGG | - | chr4_1:78080320-78080339 | Msa0574520:CDS | 40.0% |
| !! | ACTCCTTTGAAATGGACACA+GGG | - | chr4_1:78080321-78080340 | Msa0574520:intron | 40.0% |
| CTTATTGCTGCTGATCTTAG+AGG | - | chr4_1:78080402-78080421 | Msa0574520:intron | 40.0% | |
| ! | GACAAGTGATCCTTTTGTGA+GGG | - | chr4_1:78080425-78080444 | Msa0574520:intron | 40.0% |
| CCATAGTTTACCCTCACAAA+AGG | + | chr4_1:78080438-78080457 | None:intergenic | 40.0% | |
| ! | CCTTTTGTGAGGGTAAACTA+TGG | - | chr4_1:78080435-78080454 | Msa0574520:intron | 40.0% |
| TTACTGTGGCATTATCTGGT+AGG | - | chr4_1:78080651-78080670 | Msa0574520:CDS | 40.0% | |
| ACCTTAGAGTTCCTAGATGA+TGG | - | chr4_1:78080709-78080728 | Msa0574520:intron | 40.0% | |
| TCCATCATCTAGGAACTCTA+AGG | + | chr4_1:78080713-78080732 | None:intergenic | 40.0% | |
| TCCTTTACATGCAATGTCAG+GGG | + | chr4_1:78080739-78080758 | None:intergenic | 40.0% | |
| GTCCTTTACATGCAATGTCA+GGG | + | chr4_1:78080740-78080759 | None:intergenic | 40.0% | |
| !! | GACTGTCTTGTTTGAATCTC+TGG | + | chr4_1:78080907-78080926 | None:intergenic | 40.0% |
| CAAGATAATCTTACCTGGCT+AGG | + | chr4_1:78080970-78080989 | None:intergenic | 40.0% | |
| AGAGCTGAAAAGGTAACCAA+AGG | + | chr4_1:78081025-78081044 | None:intergenic | 40.0% | |
| CTTCATCATCAGAGCTGAAA+AGG | + | chr4_1:78081035-78081054 | None:intergenic | 40.0% | |
| ! | TGCATGCGACAACATTTTAC+AGG | - | chr4_1:78081082-78081101 | Msa0574520:intron | 40.0% |
| ! | ACTCTAGAGGATACACAAGA+AGG | - | chr4_1:78081516-78081535 | Msa0574520:intron | 40.0% |
| ! | CTCTAGAGGATACACAAGAA+GGG | - | chr4_1:78081517-78081536 | Msa0574520:intron | 40.0% |
| AATTCTTCTCCATCCCTCAA+CGG | - | chr4_1:78081612-78081631 | Msa0574520:CDS | 40.0% | |
| TCAATTTCCACTTCCGTTGA+GGG | + | chr4_1:78081628-78081647 | None:intergenic | 40.0% | |
| ATCAATTTCCACTTCCGTTG+AGG | + | chr4_1:78081629-78081648 | None:intergenic | 40.0% | |
| CTTACAAACACTACGTGACA+TGG | + | chr4_1:78081744-78081763 | None:intergenic | 40.0% | |
| TGCAGTATGGGAATTACCAG+AGG | - | chr4_1:78075884-78075903 | Msa0574520:CDS | 45.0% | |
| TTGACAGCGACTCCTGAAAA+TGG | - | chr4_1:78076632-78076651 | Msa0574520:CDS | 45.0% | |
| TGACAGCGACTCCTGAAAAT+GGG | - | chr4_1:78076633-78076652 | Msa0574520:CDS | 45.0% | |
| ATGGTTGCTAAGCTTTCCGT+TGG | - | chr4_1:78076690-78076709 | Msa0574520:intron | 45.0% | |
| CACAATTCTGGCAGTACCAA+CGG | + | chr4_1:78076709-78076728 | None:intergenic | 45.0% | |
| ! | TAGGAATTGCCTTTGGAAGC+GGG | - | chr4_1:78077070-78077089 | Msa0574520:intron | 45.0% |
| GGGAGAGGCAAAGAATGAAA+AGG | + | chr4_1:78077243-78077262 | None:intergenic | 45.0% | |
| AGAATGAATGAGCATGGGAG+AGG | + | chr4_1:78077258-78077277 | None:intergenic | 45.0% | |
| CTCCCATGCTCATTCATTCT+TGG | - | chr4_1:78077258-78077277 | Msa0574520:CDS | 45.0% | |
| CATCATATGACACAGCACTG+GGG | + | chr4_1:78077335-78077354 | None:intergenic | 45.0% | |
| CACTTTGGTAAAGACCATGG+TGG | - | chr4_1:78077404-78077423 | Msa0574520:intron | 45.0% | |
| ! | TAAAGACCATGGTGGAACCT+CGG | - | chr4_1:78077412-78077431 | Msa0574520:intron | 45.0% |
| TTCAAGGGGAGGCAACAAAA+TGG | - | chr4_1:78077537-78077556 | Msa0574520:intron | 45.0% | |
| GGACTTGCAGACATTTGTAG+AGG | - | chr4_1:78077599-78077618 | Msa0574520:CDS | 45.0% | |
| ATTTGTAGAGGTAGAAGCGG+AGG | - | chr4_1:78077611-78077630 | Msa0574520:CDS | 45.0% | |
| TCATACTTCACACTGTCAGG+GGG | + | chr4_1:78077750-78077769 | None:intergenic | 45.0% | |
| GTCATACTTCACACTGTCAG+GGG | + | chr4_1:78077751-78077770 | None:intergenic | 45.0% | |
| ! | AGATGATTGTAGTGGGGGTT+TGG | + | chr4_1:78078149-78078168 | None:intergenic | 45.0% |
| GGCTTAGATGATTGTAGTGG+GGG | + | chr4_1:78078154-78078173 | None:intergenic | 45.0% | |
| AATATGTACACCACCACCCA+TGG | - | chr4_1:78078198-78078217 | Msa0574520:intron | 45.0% | |
| CTATAGGCATGTGTGACCAT+GGG | + | chr4_1:78078217-78078236 | None:intergenic | 45.0% | |
| TCTATAGGCATGTGTGACCA+TGG | + | chr4_1:78078218-78078237 | None:intergenic | 45.0% | |
| ! | GATGAGTTTTTCTGGGCAAG+AGG | - | chr4_1:78078447-78078466 | Msa0574520:intron | 45.0% |
| ATTGCTCTGTTCTCGGTTAC+CGG | + | chr4_1:78078580-78078599 | None:intergenic | 45.0% | |
| CCACATCATTGCTCTGTTCT+CGG | + | chr4_1:78078587-78078606 | None:intergenic | 45.0% | |
| !! | GACGACATTTTGACAATCGC+TGG | + | chr4_1:78078632-78078651 | None:intergenic | 45.0% |
| AATGCTTGTCCCATTTGAGG+GGG | - | chr4_1:78078840-78078859 | Msa0574520:intron | 45.0% | |
| ! | CATCAGAGCTTTTGTGACCA+AGG | + | chr4_1:78079092-78079111 | None:intergenic | 45.0% |
| TTGCAGTATGGAAAGGTGAG+AGG | - | chr4_1:78079771-78079790 | Msa0574520:CDS | 45.0% | |
| ! | TATGGAAAGGTGAGAGGTAC+TGG | - | chr4_1:78079777-78079796 | Msa0574520:CDS | 45.0% |
| GTATCATTCCAGACAGCAGT+TGG | + | chr4_1:78079992-78080011 | None:intergenic | 45.0% | |
| ACTGGTACAAGGGTCAATCA+GGG | - | chr4_1:78080120-78080139 | Msa0574520:intron | 45.0% | |
| CAGAACTCACTCCTTCAAGT+GGG | + | chr4_1:78080156-78080175 | None:intergenic | 45.0% | |
| AATTTGGGTGGAGAACCAAG+AGG | - | chr4_1:78080201-78080220 | Msa0574520:intron | 45.0% | |
| ATTTGGGTGGAGAACCAAGA+GGG | - | chr4_1:78080202-78080221 | Msa0574520:CDS | 45.0% | |
| AGCATACCTTTGATCCCTCT+TGG | + | chr4_1:78080219-78080238 | None:intergenic | 45.0% | |
| ! | CAAGCCCTACTCCTTTGAAA+TGG | - | chr4_1:78080313-78080332 | Msa0574520:CDS | 45.0% |
| ! | GGACAAGTGATCCTTTTGTG+AGG | - | chr4_1:78080424-78080443 | Msa0574520:intron | 45.0% |
| ACAAAACTGTCAACCCTCGT+TGG | - | chr4_1:78080680-78080699 | Msa0574520:CDS | 45.0% | |
| CAAAACTGTCAACCCTCGTT+GGG | - | chr4_1:78080681-78080700 | Msa0574520:CDS | 45.0% | |
| !! | CATCTAGGAACTCTAAGGTC+TGG | + | chr4_1:78080708-78080727 | None:intergenic | 45.0% |
| TCCCCTGACATTGCATGTAA+AGG | - | chr4_1:78080735-78080754 | Msa0574520:intron | 45.0% | |
| GGTCCTTTACATGCAATGTC+AGG | + | chr4_1:78080741-78080760 | None:intergenic | 45.0% | |
| ACAAGTGGATACCTCTCCAA+GGG | - | chr4_1:78080839-78080858 | Msa0574520:intron | 45.0% | |
| ! | GTCAAAGAAGGTACAGAGTC+TGG | + | chr4_1:78080931-78080950 | None:intergenic | 45.0% |
| ATTACACCAGATTCCTAGCC+AGG | - | chr4_1:78080954-78080973 | Msa0574520:intron | 45.0% | |
| ATCTTACCTGGCTAGGAATC+TGG | + | chr4_1:78080963-78080982 | None:intergenic | 45.0% | |
| GAGCGAGTTAGAAACTCTAG+AGG | - | chr4_1:78081503-78081522 | Msa0574520:intron | 45.0% | |
| ! | AGAAGGGTATATAGCCCAGT+TGG | - | chr4_1:78081533-78081552 | Msa0574520:intron | 45.0% |
| CATTTGCTCAGTCTCCAACT+GGG | + | chr4_1:78081550-78081569 | None:intergenic | 45.0% | |
| ! | CCTCCTCGAGTATTTTCCTC+TGG | + | chr4_1:78075903-78075922 | None:intergenic | 50.0% |
| CCAGAGGAAAATACTCGAGG+AGG | - | chr4_1:78075900-78075919 | Msa0574520:intron | 50.0% | |
| TTTGTGTGAGTCGGTGAGTG+TGG | - | chr4_1:78076178-78076197 | Msa0574520:intron | 50.0% | |
| AGCACTTCAACCCTTTCCTG+CGG | + | chr4_1:78076387-78076406 | None:intergenic | 50.0% | |
| ATCCCTTGAAGGCCCAAACT+GGG | + | chr4_1:78076435-78076454 | None:intergenic | 50.0% | |
| AATCCCTTGAAGGCCCAAAC+TGG | + | chr4_1:78076436-78076455 | None:intergenic | 50.0% | |
| TGGGCCTTCAAGGGATTAGA+TGG | - | chr4_1:78076439-78076458 | Msa0574520:CDS | 50.0% | |
| GGGATTAGATGGTCAACCTC+TGG | - | chr4_1:78076450-78076469 | Msa0574520:CDS | 50.0% | |
| ATGGTCAACCTCTGGTGATC+AGG | - | chr4_1:78076458-78076477 | Msa0574520:CDS | 50.0% | |
| ! | AGGAATTGCCTTTGGAAGCG+GGG | - | chr4_1:78077071-78077090 | Msa0574520:intron | 50.0% |
| AGAAACACCAGGCAACTCAG+TGG | + | chr4_1:78077109-78077128 | None:intergenic | 50.0% | |
| AGTTGCCTGGTGTTTCTCCT+TGG | - | chr4_1:78077112-78077131 | Msa0574520:CDS | 50.0% | |
| CTGCAGGCAAACTGAAACAG+CGG | + | chr4_1:78077440-78077459 | None:intergenic | 50.0% | |
| ! | AGGAGAACAGGTGTGCGTTT+TGG | - | chr4_1:78077642-78077661 | Msa0574520:CDS | 50.0% |
| CATACTTCACACTGTCAGGG+GGG | + | chr4_1:78077749-78077768 | None:intergenic | 50.0% | |
| AGTTGGTTGTGGGTACGAGA+CGG | + | chr4_1:78078117-78078136 | None:intergenic | 50.0% | |
| ! | GCTAGGATGGAGTTGGTTGT+GGG | + | chr4_1:78078127-78078146 | None:intergenic | 50.0% |
| ! | ATTGTAGTGGGGGTTTGGCT+AGG | + | chr4_1:78078144-78078163 | None:intergenic | 50.0% |
| AAAGGATGGGGAAAGGCTGT+TGG | + | chr4_1:78078175-78078194 | None:intergenic | 50.0% | |
| CCGAGAACAGAGCAATGATG+TGG | - | chr4_1:78078584-78078603 | Msa0574520:intron | 50.0% | |
| CGATGAGAAGATGAGGCATG+TGG | - | chr4_1:78078732-78078751 | Msa0574520:intron | 50.0% | |
| TGAGAAGATGAGGCATGTGG+AGG | - | chr4_1:78078735-78078754 | Msa0574520:intron | 50.0% | |
| !! | CTGATTTGGCCCCCTCAAAT+GGG | + | chr4_1:78078852-78078871 | None:intergenic | 50.0% |
| ! | CAGAGCTTTTGTGACCAAGG+TGG | + | chr4_1:78079089-78079108 | None:intergenic | 50.0% |
| AAGAGCGGAAATGTCTCTGC+GGG | + | chr4_1:78079451-78079470 | None:intergenic | 50.0% | |
| CAAGAGCGGAAATGTCTCTG+CGG | + | chr4_1:78079452-78079471 | None:intergenic | 50.0% | |
| ! | ATTTCTGAGGACTGGCATGG+AGG | + | chr4_1:78079632-78079651 | None:intergenic | 50.0% |
| ! | GTGATTTCTGAGGACTGGCA+TGG | + | chr4_1:78079635-78079654 | None:intergenic | 50.0% |
| ACAGCAGTTGGAGTAGTAGG+AGG | + | chr4_1:78079980-78079999 | None:intergenic | 50.0% | |
| CAGACAGCAGTTGGAGTAGT+AGG | + | chr4_1:78079983-78080002 | None:intergenic | 50.0% | |
| CTACTACTCCAACTGCTGTC+TGG | - | chr4_1:78079981-78080000 | Msa0574520:intron | 50.0% | |
| GACTGGTACAAGGGTCAATC+AGG | - | chr4_1:78080119-78080138 | Msa0574520:intron | 50.0% | |
| AAGGGTCAATCAGGGACGTA+TGG | - | chr4_1:78080128-78080147 | Msa0574520:intron | 50.0% | |
| GACGTATGGATCCCACTTGA+AGG | - | chr4_1:78080142-78080161 | Msa0574520:intron | 50.0% | |
| CCAGAACTCACTCCTTCAAG+TGG | + | chr4_1:78080157-78080176 | None:intergenic | 50.0% | |
| CCACTTGAAGGAGTGAGTTC+TGG | - | chr4_1:78080154-78080173 | Msa0574520:intron | 50.0% | |
| GGAGAACCAAGAGGGATCAA+AGG | - | chr4_1:78080210-78080229 | Msa0574520:CDS | 50.0% | |
| GGACCCTGTGTCCATTTCAA+AGG | + | chr4_1:78080327-78080346 | None:intergenic | 50.0% | |
| ! | GGATGTTTGGTTCACGCAAG+AGG | + | chr4_1:78080505-78080524 | None:intergenic | 50.0% |
| TCAGGGGACTTCCATCATCT+AGG | + | chr4_1:78080723-78080742 | None:intergenic | 50.0% | |
| CACTTGTCTGACGTCTGGTT+CGG | + | chr4_1:78080826-78080845 | None:intergenic | 50.0% | |
| GTATCCACTTGTCTGACGTC+TGG | + | chr4_1:78080831-78080850 | None:intergenic | 50.0% | |
| GACAAGTGGATACCTCTCCA+AGG | - | chr4_1:78080838-78080857 | Msa0574520:intron | 50.0% | |
| CAAGTGGATACCTCTCCAAG+GGG | - | chr4_1:78080840-78080859 | Msa0574520:intron | 50.0% | |
| !! | AGAGAAGTGCCCCCAAGAAA+TGG | + | chr4_1:78081225-78081244 | None:intergenic | 50.0% |
| GCATTTGCTCAGTCTCCAAC+TGG | + | chr4_1:78081551-78081570 | None:intergenic | 50.0% | |
| TTTCCACTTCCGTTGAGGGA+TGG | + | chr4_1:78081624-78081643 | None:intergenic | 50.0% | |
| AGTGCAGCTAGGAGAAGACT+TGG | + | chr4_1:78081795-78081814 | None:intergenic | 50.0% | |
| ACAGATTGTGGAGTGCAGCT+AGG | + | chr4_1:78081806-78081825 | None:intergenic | 50.0% | |
| GCAGGAAAGGGTTGAAGTGC+TGG | - | chr4_1:78076386-78076405 | Msa0574520:CDS | 55.0% | |
| CTTGAAGGCCCAAACTGGGA+GGG | + | chr4_1:78076431-78076450 | None:intergenic | 55.0% | |
| CTCCCAGTTTGGGCCTTCAA+GGG | - | chr4_1:78076430-78076449 | Msa0574520:CDS | 55.0% | |
| ! | GGAATTGCCTTTGGAAGCGG+GGG | - | chr4_1:78077072-78077091 | Msa0574520:intron | 55.0% |
| CAGGCAACTCAGTGGCTGAT+TGG | + | chr4_1:78077101-78077120 | None:intergenic | 55.0% | |
| CAATCAGCCACTGAGTTGCC+TGG | - | chr4_1:78077099-78077118 | Msa0574520:intron | 55.0% | |
| ACCAGCCAAGGAGAAACACC+AGG | + | chr4_1:78077120-78077139 | None:intergenic | 55.0% | |
| CTAGGAGTTGCTTCAAGGGG+AGG | - | chr4_1:78077526-78077545 | Msa0574520:intron | 55.0% | |
| TAGAAGCGGAGGAGCTGACA+AGG | - | chr4_1:78077622-78077641 | Msa0574520:CDS | 55.0% | |
| GAGGAGCTGACAAGGAGAAC+AGG | - | chr4_1:78077630-78077649 | Msa0574520:CDS | 55.0% | |
| ! | GGCTAGGATGGAGTTGGTTG+TGG | + | chr4_1:78078128-78078147 | None:intergenic | 55.0% |
| GGGTTTGGCTAGGATGGAGT+TGG | + | chr4_1:78078134-78078153 | None:intergenic | 55.0% | |
| TAGTGGGGGTTTGGCTAGGA+TGG | + | chr4_1:78078140-78078159 | None:intergenic | 55.0% | |
| TAGGCATGTGTGACCATGGG+TGG | + | chr4_1:78078214-78078233 | None:intergenic | 55.0% | |
| TGGGCAATAGGGCCTGATTC+TGG | - | chr4_1:78078775-78078794 | Msa0574520:intron | 55.0% | |
| !! | GCTGATTTGGCCCCCTCAAA+TGG | + | chr4_1:78078853-78078872 | None:intergenic | 55.0% |
| AGAGCGGAAATGTCTCTGCG+GGG | + | chr4_1:78079450-78079469 | None:intergenic | 55.0% | |
| GCAGTTGGAGTAGTAGGAGG+AGG | + | chr4_1:78079977-78079996 | None:intergenic | 55.0% | |
| ATGGACACAGGGTCCACCAT+CGG | - | chr4_1:78080332-78080351 | Msa0574520:intron | 55.0% | |
| CAACCATTCGTCATGCCCGA+TGG | + | chr4_1:78080351-78080370 | None:intergenic | 55.0% | |
| CATCGGGCATGACGAATGGT+TGG | - | chr4_1:78080349-78080368 | Msa0574520:intron | 55.0% | |
| CTAAGGTCTGGTCCCAACGA+GGG | + | chr4_1:78080696-78080715 | None:intergenic | 55.0% | |
| ! | TCTAAGGTCTGGTCCCAACG+AGG | + | chr4_1:78080697-78080716 | None:intergenic | 55.0% |
| !! | TTGTCTGACGTCTGGTTCGG+AGG | + | chr4_1:78080823-78080842 | None:intergenic | 55.0% |
| CGAACCAGACGTCAGACAAG+TGG | - | chr4_1:78080824-78080843 | Msa0574520:intron | 55.0% | |
| !! | CCACTTTTCACCCCTTGGAG+AGG | + | chr4_1:78080853-78080872 | None:intergenic | 55.0% |
| CCTCTCCAAGGGGTGAAAAG+TGG | - | chr4_1:78080850-78080869 | Msa0574520:intron | 55.0% | |
| !!! | TCTCGCCACTTTTCACCCCT+TGG | + | chr4_1:78080858-78080877 | None:intergenic | 55.0% |
| TCTCCATCCCTCAACGGAAG+TGG | - | chr4_1:78081618-78081637 | Msa0574520:CDS | 55.0% | |
| TGGATCACGCCCTCCCAGTT+TGG | - | chr4_1:78076419-78076438 | Msa0574520:CDS | 60.0% | |
| GGATCACGCCCTCCCAGTTT+GGG | - | chr4_1:78076420-78076439 | Msa0574520:CDS | 60.0% | |
| CCTTGAAGGCCCAAACTGGG+AGG | + | chr4_1:78076432-78076451 | None:intergenic | 60.0% | |
| CCTCCCAGTTTGGGCCTTCA+AGG | - | chr4_1:78076429-78076448 | Msa0574520:CDS | 60.0% | |
| TTGGCTTCCCCCGCTTCCAA+AGG | + | chr4_1:78077082-78077101 | None:intergenic | 60.0% | |
| GCCTGGTGTTTCTCCTTGGC+TGG | - | chr4_1:78077116-78077135 | Msa0574520:CDS | 60.0% | |
| AAACTGAAACAGCGGCGCCG+AGG | + | chr4_1:78077432-78077451 | None:intergenic | 60.0% | |
| GTTGTGGGTACGAGACGGTG+TGG | + | chr4_1:78078112-78078131 | None:intergenic | 60.0% | |
| GCATGTGTGACCATGGGTGG+TGG | + | chr4_1:78078211-78078230 | None:intergenic | 60.0% | |
| TGAGGGGGCCAAATCAGCAG+AGG | - | chr4_1:78078855-78078874 | Msa0574520:intron | 60.0% | |
| ! | CTGAGGACTGGCATGGAGGT+TGG | + | chr4_1:78079628-78079647 | None:intergenic | 60.0% |
| TGGACACAGGGTCCACCATC+GGG | - | chr4_1:78080333-78080352 | Msa0574520:intron | 60.0% | |
| CCATTCGTCATGCCCGATGG+TGG | + | chr4_1:78080348-78080367 | None:intergenic | 60.0% | |
| CCACCATCGGGCATGACGAA+TGG | - | chr4_1:78080345-78080364 | Msa0574520:intron | 60.0% | |
| !! | CTGACGTCTGGTTCGGAGGA+AGG | + | chr4_1:78080819-78080838 | None:intergenic | 60.0% |
| ! | GCGGCGCCGAGGTTCCACCA+TGG | + | chr4_1:78077421-78077440 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 78075390 | 78081949 | 78075390 | ID=Msa0574520;Name=Msa0574520 |
| chr4_1 | mRNA | 78075390 | 78081949 | 78075390 | ID=Msa0574520-mRNA-1;Parent=Msa0574520;Name=Msa0574520-mRNA-1;_AED=0.10;_eAED=0.10;_QI=172|1|1|1|1|1|14|302|821 |
| chr4_1 | exon | 78075390 | 78075907 | 78075390 | ID=Msa0574520-mRNA-1:exon:27632;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78076364 | 78076666 | 78076364 | ID=Msa0574520-mRNA-1:exon:27631;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78076860 | 78076997 | 78076860 | ID=Msa0574520-mRNA-1:exon:27630;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78077108 | 78077389 | 78077108 | ID=Msa0574520-mRNA-1:exon:27629;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78077554 | 78077772 | 78077554 | ID=Msa0574520-mRNA-1:exon:27628;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78078463 | 78078597 | 78078463 | ID=Msa0574520-mRNA-1:exon:27627;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78079545 | 78079952 | 78079545 | ID=Msa0574520-mRNA-1:exon:27626;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78080202 | 78080339 | 78080202 | ID=Msa0574520-mRNA-1:exon:27625;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78080584 | 78080700 | 78080584 | ID=Msa0574520-mRNA-1:exon:27624;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78080860 | 78080949 | 78080860 | ID=Msa0574520-mRNA-1:exon:27623;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78081064 | 78081096 | 78081064 | ID=Msa0574520-mRNA-1:exon:27622;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78081179 | 78081286 | 78081179 | ID=Msa0574520-mRNA-1:exon:27621;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78081376 | 78081450 | 78081376 | ID=Msa0574520-mRNA-1:exon:27620;Parent=Msa0574520-mRNA-1 |
| chr4_1 | exon | 78081574 | 78081949 | 78081574 | ID=Msa0574520-mRNA-1:exon:27619;Parent=Msa0574520-mRNA-1 |
| chr4_1 | five_prime_UTR | 78081778 | 78081949 | 78081778 | ID=Msa0574520-mRNA-1:five_prime_utr;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78081574 | 78081777 | 78081574 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78081376 | 78081450 | 78081376 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78081179 | 78081286 | 78081179 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78081064 | 78081096 | 78081064 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78080860 | 78080949 | 78080860 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78080584 | 78080700 | 78080584 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78080202 | 78080339 | 78080202 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78079545 | 78079952 | 78079545 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78078463 | 78078597 | 78078463 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78077554 | 78077772 | 78077554 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78077108 | 78077389 | 78077108 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78076860 | 78076997 | 78076860 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78076364 | 78076666 | 78076364 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | CDS | 78075692 | 78075907 | 78075692 | ID=Msa0574520-mRNA-1:cds;Parent=Msa0574520-mRNA-1 |
| chr4_1 | three_prime_UTR | 78075390 | 78075691 | 78075390 | ID=Msa0574520-mRNA-1:three_prime_utr;Parent=Msa0574520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
