Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316050 | sp|O24457|ODPA3_ARATH | 82.323 | 396 | 58 | 5 | 43 | 427 | 34 | 428 | 0.0 | 665 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316050 | A0A072TYD9 | 98.361 | 427 | 7 | 0 | 1 | 427 | 1 | 427 | 0.0 | 877 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007230 | Msa1316050 | 0.803283 | 3.753647e-49 | -8.615850e-47 |
| Msa0021130 | Msa1316050 | 0.822865 | 1.884965e-53 | -8.615850e-47 |
| Msa0024680 | Msa1316050 | 0.800293 | 1.542815e-48 | -8.615850e-47 |
| Msa0030000 | Msa1316050 | 0.803863 | 2.845192e-49 | -8.615850e-47 |
| Msa0038350 | Msa1316050 | -0.812288 | 4.571629e-51 | -8.615850e-47 |
| Msa0039420 | Msa1316050 | -0.803007 | 4.280733e-49 | -8.615850e-47 |
| Msa0055590 | Msa1316050 | 0.810031 | 1.410744e-50 | -8.615850e-47 |
| Msa0060600 | Msa1316050 | 0.800948 | 1.134321e-48 | -8.615850e-47 |
| Msa0072000 | Msa1316050 | 0.844850 | 5.855441e-59 | -8.615850e-47 |
| Msa0091770 | Msa1316050 | 0.828416 | 9.098625e-55 | -8.615850e-47 |
| Msa0105340 | Msa1316050 | 0.822547 | 2.234460e-53 | -8.615850e-47 |
| Msa0105420 | Msa1316050 | 0.857702 | 1.363447e-62 | -8.615850e-47 |
| Msa0113870 | Msa1316050 | 0.807991 | 3.857093e-50 | -8.615850e-47 |
| Msa0120330 | Msa1316050 | 0.837377 | 5.386826e-57 | -8.615850e-47 |
| Msa0614040 | Msa1316050 | 0.811301 | 7.498661e-51 | -8.615850e-47 |
| Msa0621890 | Msa1316050 | 0.814428 | 1.548578e-51 | -8.615850e-47 |
| Msa0642710 | Msa1316050 | 0.812025 | 5.217793e-51 | -8.615850e-47 |
| Msa0709480 | Msa1316050 | 0.810592 | 1.067914e-50 | -8.615850e-47 |
| Msa0792510 | Msa1316050 | 0.800996 | 1.109088e-48 | -8.615850e-47 |
| Msa0158020 | Msa1316050 | 0.820105 | 8.174789e-53 | -8.615850e-47 |
| Msa0160000 | Msa1316050 | 0.810920 | 9.069275e-51 | -8.615850e-47 |
| Msa0172350 | Msa1316050 | 0.802302 | 5.984482e-49 | -8.615850e-47 |
| Msa0196130 | Msa1316050 | -0.812434 | 4.247807e-51 | -8.615850e-47 |
| Msa0200950 | Msa1316050 | -0.801681 | 8.028603e-49 | -8.615850e-47 |
| Msa0207000 | Msa1316050 | 0.826061 | 3.334531e-54 | -8.615850e-47 |
| Msa0207180 | Msa1316050 | 0.802696 | 4.962852e-49 | -8.615850e-47 |
| Msa0227510 | Msa1316050 | 0.803212 | 3.881948e-49 | -8.615850e-47 |
| Msa1237030 | Msa1316050 | 0.817921 | 2.566570e-52 | -8.615850e-47 |
| Msa1237820 | Msa1316050 | 0.816844 | 4.483869e-52 | -8.615850e-47 |
| Msa1238490 | Msa1316050 | 0.803318 | 3.692148e-49 | -8.615850e-47 |
| Msa1254770 | Msa1316050 | 0.804624 | 1.975432e-49 | -8.615850e-47 |
| Msa1265960 | Msa1316050 | 0.811104 | 8.272707e-51 | -8.615850e-47 |
| Msa1316050 | Msa1323060 | 0.815465 | 9.117067e-52 | -8.615850e-47 |
| Msa1316050 | Msa1329990 | 0.838816 | 2.296187e-57 | -8.615850e-47 |
| Msa1316050 | Msa1335860 | 0.804853 | 1.769243e-49 | -8.615850e-47 |
| Msa1316050 | Msa1362510 | 0.801891 | 7.270097e-49 | -8.615850e-47 |
| Msa1316050 | Msa1367080 | 0.820930 | 5.288024e-53 | -8.615850e-47 |
| Msa1316050 | Msa1382720 | 0.820216 | 7.710672e-53 | -8.615850e-47 |
| Msa1316050 | Msa1385620 | 0.853998 | 1.648612e-61 | -8.615850e-47 |
| Msa1316050 | Msa1398480 | 0.800608 | 1.330811e-48 | -8.615850e-47 |
| Msa1316050 | Msa1408790 | 0.809361 | 1.965500e-50 | -8.615850e-47 |
| Msa1316050 | Msa1431000 | 0.808833 | 2.549759e-50 | -8.615850e-47 |
| Msa1316050 | Msa1436040 | 0.801178 | 1.017631e-48 | -8.615850e-47 |
| Msa1316050 | Msa1457670 | -0.800544 | 1.371550e-48 | -8.615850e-47 |
| Msa1316050 | Msa1464560 | 0.824638 | 7.243510e-54 | -8.615850e-47 |
| Msa0378340 | Msa1316050 | 0.817794 | 2.740623e-52 | -8.615850e-47 |
| Msa0427690 | Msa1316050 | 0.820675 | 6.052116e-53 | -8.615850e-47 |
| Msa0980440 | Msa1316050 | 0.814407 | 1.565184e-51 | -8.615850e-47 |
| Msa1008490 | Msa1316050 | 0.816245 | 6.107290e-52 | -8.615850e-47 |
| Msa1018050 | Msa1316050 | 0.807959 | 3.916980e-50 | -8.615850e-47 |
| Msa1020710 | Msa1316050 | 0.816923 | 4.305092e-52 | -8.615850e-47 |
| Msa1029320 | Msa1316050 | 0.810238 | 1.273037e-50 | -8.615850e-47 |
| Msa1033440 | Msa1316050 | -0.835297 | 1.821402e-56 | -8.615850e-47 |
| Msa1036390 | Msa1316050 | 0.812968 | 3.245211e-51 | -8.615850e-47 |
| Msa1038050 | Msa1316050 | 0.804515 | 2.082107e-49 | -8.615850e-47 |
| Msa1055260 | Msa1316050 | 0.808636 | 2.809318e-50 | -8.615850e-47 |
| Msa1055280 | Msa1316050 | 0.809149 | 2.182579e-50 | -8.615850e-47 |
| Msa1056640 | Msa1316050 | 0.805212 | 1.488370e-49 | -8.615850e-47 |
| Msa1058010 | Msa1316050 | 0.807352 | 5.271152e-50 | -8.615850e-47 |
| Msa1073110 | Msa1316050 | -0.839186 | 1.841769e-57 | -8.615850e-47 |
| Msa1076680 | Msa1316050 | 0.802386 | 5.750362e-49 | -8.615850e-47 |
| Msa1099030 | Msa1316050 | 0.818787 | 1.633646e-52 | -8.615850e-47 |
| Msa0267760 | Msa1316050 | 0.805495 | 1.298953e-49 | -8.615850e-47 |
| Msa0269360 | Msa1316050 | 0.813998 | 1.926947e-51 | -8.615850e-47 |
| Msa1109570 | Msa1316050 | 0.803313 | 3.699936e-49 | -8.615850e-47 |
| Msa1125780 | Msa1316050 | 0.826529 | 2.581042e-54 | -8.615850e-47 |
| Msa1125950 | Msa1316050 | 0.824456 | 7.994808e-54 | -8.615850e-47 |
| Msa1159990 | Msa1316050 | 0.803325 | 3.678387e-49 | -8.615850e-47 |
| Msa1161800 | Msa1316050 | 0.820925 | 5.301528e-53 | -8.615850e-47 |
| Msa1171340 | Msa1316050 | 0.822464 | 2.335544e-53 | -8.615850e-47 |
| Msa1175800 | Msa1316050 | 0.951249 | 3.040617e-109 | -8.615850e-47 |
| Msa1201990 | Msa1316050 | 0.841688 | 4.082043e-58 | -8.615850e-47 |
| Msa1210770 | Msa1316050 | 0.808025 | 3.793276e-50 | -8.615850e-47 |
| Msa1220230 | Msa1316050 | 0.808826 | 2.558384e-50 | -8.615850e-47 |
| Msa1222970 | Msa1316050 | 0.820082 | 8.277980e-53 | -8.615850e-47 |
| Msa0518520 | Msa1316050 | 0.816122 | 6.507795e-52 | -8.615850e-47 |
| Msa0526640 | Msa1316050 | -0.822799 | 1.951928e-53 | -8.615850e-47 |
| Msa0526710 | Msa1316050 | 0.804375 | 2.226625e-49 | -8.615850e-47 |
| Msa0546380 | Msa1316050 | 0.827540 | 1.478836e-54 | -8.615850e-47 |
| Msa0574520 | Msa1316050 | 0.802260 | 6.103555e-49 | -8.615850e-47 |
| Msa0581760 | Msa1316050 | 0.800141 | 1.656763e-48 | -8.615850e-47 |
| Msa0583940 | Msa1316050 | 0.806554 | 7.775306e-50 | -8.615850e-47 |
| Msa0845590 | Msa1316050 | -0.807275 | 5.472231e-50 | -8.615850e-47 |
| Msa0854570 | Msa1316050 | 0.807992 | 3.853960e-50 | -8.615850e-47 |
| Msa0890250 | Msa1316050 | 0.818160 | 2.265478e-52 | -8.615850e-47 |
| Msa0896210 | Msa1316050 | 0.811160 | 8.046041e-51 | -8.615850e-47 |
| Msa0896220 | Msa1316050 | 0.829104 | 6.204100e-55 | -8.615850e-47 |
| Msa0907700 | Msa1316050 | 0.844344 | 8.011912e-59 | -8.615850e-47 |
| Msa0925160 | Msa1316050 | 0.814664 | 1.373372e-51 | -8.615850e-47 |
| Msa0937940 | Msa1316050 | 0.810658 | 1.032926e-50 | -8.615850e-47 |
| Msa0946320 | Msa1316050 | 0.801951 | 7.066268e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316050 | MtrunA17_Chr8g0345911 | 98.361 | 427 | 7 | 0 | 1 | 427 | 1 | 427 | 0.0 | 877 |
| Msa1316050 | MtrunA17_Chr5g0414991 | 39.650 | 343 | 183 | 6 | 81 | 416 | 64 | 389 | 2.20e-79 | 250 |
| Msa1316050 | MtrunA17_Chr8g0364201 | 38.068 | 352 | 194 | 6 | 72 | 416 | 55 | 389 | 2.36e-78 | 248 |
| Msa1316050 | MtrunA17_Chr7g0276281 | 90.805 | 87 | 8 | 0 | 256 | 342 | 15 | 101 | 1.02e-52 | 171 |
| Msa1316050 | MtrunA17_Chr3g0125611 | 26.866 | 335 | 231 | 4 | 69 | 401 | 113 | 435 | 5.54e-34 | 132 |
| Msa1316050 | MtrunA17_Chr3g0130311 | 25.826 | 333 | 237 | 3 | 72 | 402 | 97 | 421 | 1.78e-33 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316050 | AT1G01090.1 | 82.323 | 396 | 58 | 5 | 43 | 427 | 34 | 428 | 0.0 | 665 |
| Msa1316050 | AT1G59900.1 | 39.650 | 343 | 180 | 7 | 78 | 410 | 55 | 380 | 1.51e-79 | 251 |
| Msa1316050 | AT1G59900.2 | 39.583 | 336 | 179 | 6 | 78 | 406 | 55 | 373 | 7.57e-79 | 249 |
| Msa1316050 | AT1G24180.1 | 35.917 | 387 | 219 | 7 | 35 | 404 | 3 | 377 | 1.73e-76 | 243 |
| Msa1316050 | AT5G09300.2 | 26.786 | 336 | 232 | 5 | 68 | 401 | 45 | 368 | 4.55e-34 | 131 |
| Msa1316050 | AT5G09300.1 | 26.786 | 336 | 232 | 5 | 68 | 401 | 116 | 439 | 6.80e-34 | 132 |
| Msa1316050 | AT1G21400.4 | 25.305 | 328 | 229 | 4 | 77 | 399 | 33 | 349 | 3.25e-29 | 117 |
| Msa1316050 | AT1G21400.2 | 25.305 | 328 | 229 | 4 | 77 | 399 | 33 | 349 | 3.25e-29 | 117 |
| Msa1316050 | AT1G21400.3 | 25.305 | 328 | 229 | 4 | 77 | 399 | 50 | 366 | 5.19e-29 | 117 |
| Msa1316050 | AT1G21400.5 | 25.373 | 335 | 233 | 5 | 77 | 405 | 177 | 500 | 5.94e-29 | 119 |
| Msa1316050 | AT1G21400.1 | 25.305 | 328 | 229 | 4 | 77 | 399 | 125 | 441 | 6.63e-29 | 118 |
| Msa1316050 | AT5G09300.3 | 27.419 | 248 | 172 | 2 | 68 | 315 | 116 | 355 | 8.41e-25 | 105 |
| Msa1316050 | AT5G09300.4 | 27.604 | 192 | 131 | 2 | 68 | 259 | 116 | 299 | 5.46e-18 | 85.1 |
| Msa1316050 | AT5G34780.1 | 28.729 | 181 | 127 | 1 | 221 | 399 | 31 | 211 | 1.01e-15 | 78.6 |
| Msa1316050 | AT1G21400.6 | 25.683 | 183 | 128 | 2 | 77 | 259 | 177 | 351 | 2.39e-13 | 71.6 |
Find 111 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTGGGATGTCACATCTT+AGG | 0.211388 | 8_4:+15719075 | Msa1316050:CDS |
| AAGAAGAGAGTGTGAGAATT+TGG | 0.214784 | 8_4:-15716899 | None:intergenic |
| AGACCCTCAGATATGGAAAA+AGG | 0.238438 | 8_4:+15719106 | Msa1316050:CDS |
| TCTTCAACAAACCTCCAATT+TGG | 0.238999 | 8_4:+15717086 | Msa1316050:CDS |
| ATGATAAAGGGTTACCAAAT+TGG | 0.243765 | 8_4:-15717100 | None:intergenic |
| CTTTATGAAGACATGGTATT+AGG | 0.283149 | 8_4:+15718555 | Msa1316050:CDS |
| TTCGCCGATCCAAAAGGTTT+TGG | 0.285944 | 8_4:+15720717 | Msa1316050:CDS |
| GGTCCAATTCCAAAACCTTT+TGG | 0.286792 | 8_4:-15720726 | None:intergenic |
| GACAGGATGTTGCCGAGGTC+AGG | 0.320528 | 8_4:+15718791 | Msa1316050:CDS |
| GGAGATGGAACTTGTAATAA+TGG | 0.327172 | 8_4:+15718975 | Msa1316050:CDS |
| ATGTGCTGAGATGTATTATA+GGG | 0.340546 | 8_4:+15718596 | Msa1316050:CDS |
| AAATGCCAATGTCACGTTAT+CGG | 0.348170 | 8_4:-15718949 | None:intergenic |
| AGCTGGCTGCGAAGTGGTGC+AGG | 0.359831 | 8_4:-15720681 | None:intergenic |
| CAACTTCAGACCCTCAGATA+TGG | 0.372350 | 8_4:+15719099 | Msa1316050:CDS |
| TGTGAGACTTACAGATTTAG+AGG | 0.373364 | 8_4:+15719248 | Msa1316050:CDS |
| CTTGGAGTTGAAGAATTGAT+AGG | 0.391470 | 8_4:-15716928 | None:intergenic |
| AATGTGCTGAGATGTATTAT+AGG | 0.392055 | 8_4:+15718595 | Msa1316050:CDS |
| GAAAGAGAGTGGTTTATCAT+TGG | 0.392879 | 8_4:-15716953 | None:intergenic |
| CAGATTTAGAGGACATTCAT+TGG | 0.395237 | 8_4:+15719259 | Msa1316050:CDS |
| ATGTTCACGCGTTGAGTAAA+GGG | 0.396851 | 8_4:+15718727 | Msa1316050:CDS |
| CAAAAGAGAGGTGTTGAATC+AGG | 0.400382 | 8_4:+15718920 | Msa1316050:CDS |
| CCTCAAATACTTGATGAATC+CGG | 0.405964 | 8_4:-15718670 | None:intergenic |
| GAAAACAATTTGTGGGCCAT+TGG | 0.409242 | 8_4:+15719059 | Msa1316050:CDS |
| GTCTGAACATGGCTGCTTTG+TGG | 0.415529 | 8_4:+15719012 | Msa1316050:CDS |
| AGTGGTTTATCATTGGATCT+TGG | 0.422237 | 8_4:-15716946 | None:intergenic |
| CTTGCAGCTTATTACTAAAG+AGG | 0.437176 | 8_4:+15718521 | Msa1316050:intron |
| CATTGGGATGTCACATCTTA+GGG | 0.437954 | 8_4:+15719076 | Msa1316050:CDS |
| CTAATACCATGTCTTCATAA+AGG | 0.442808 | 8_4:-15718554 | None:intergenic |
| GAAATTACCAATTGTGTTTG+TGG | 0.451296 | 8_4:+15719034 | Msa1316050:CDS |
| AGCCACTGAACAAGAATTGA+AGG | 0.452201 | 8_4:+15720599 | Msa1316050:CDS |
| GGACAAGAAGCTGTTTCAAC+CGG | 0.459532 | 8_4:+15718651 | Msa1316050:CDS |
| CATGTTCACGCGTTGAGTAA+AGG | 0.460084 | 8_4:+15718726 | Msa1316050:CDS |
| CCGGATTCATCAAGTATTTG+AGG | 0.461143 | 8_4:+15718670 | Msa1316050:CDS |
| AGGAGAAGGACCAACTTTAG+TGG | 0.464470 | 8_4:+15719223 | Msa1316050:CDS |
| GGGTCCAGCATTCGGAATGC+CGG | 0.469784 | 8_4:+15719127 | Msa1316050:CDS |
| CCAAGAAAAGAGGAAGAAGA+AGG | 0.474320 | 8_4:-15717000 | None:intergenic |
| TGCCTTCAATTCTTGTTCAG+TGG | 0.476765 | 8_4:-15720601 | None:intergenic |
| CCAGGGTTACGAAGTTCATC+AGG | 0.477034 | 8_4:-15719287 | None:intergenic |
| TGAAGAAGAACAGCAGCAAC+AGG | 0.481861 | 8_4:-15717069 | None:intergenic |
| TTTCTATTTGGCAGCTGAGA+AGG | 0.484309 | 8_4:+15720515 | Msa1316050:intron |
| AATGCAGCACCGGTGGCCAC+TGG | 0.488288 | 8_4:-15718885 | None:intergenic |
| TGGCGAAGGAGGCAATTGAC+AGG | 0.490694 | 8_4:+15719192 | Msa1316050:CDS |
| TTGTGGTGGAAAACAATTTG+TGG | 0.493463 | 8_4:+15719051 | Msa1316050:CDS |
| CTGAGTAGATCCAAGAAAAG+AGG | 0.497050 | 8_4:-15717010 | None:intergenic |
| GCAGTGCCTTCAGTAAACTT+TGG | 0.498498 | 8_4:-15720774 | None:intergenic |
| CAGCTTATTACTAAAGAGGA+AGG | 0.500564 | 8_4:+15718525 | Msa1316050:intron |
| GGTCCAGCATTCGGAATGCC+GGG | 0.501988 | 8_4:+15719128 | Msa1316050:CDS |
| GAACTCTTCGGTAAGGCGAC+AGG | 0.504468 | 8_4:+15718774 | Msa1316050:CDS |
| AAAACAATTTGTGGGCCATT+GGG | 0.506998 | 8_4:+15719060 | Msa1316050:CDS |
| ATAAAGGGTTACCAAATTGG+AGG | 0.513859 | 8_4:-15717097 | None:intergenic |
| ACACCCGGCATTCCGAATGC+TGG | 0.515890 | 8_4:-15719131 | None:intergenic |
| TGCCGGGTGTTCATGTCGAC+GGG | 0.518486 | 8_4:+15719144 | Msa1316050:CDS |
| ACAGGATGTTGCCGAGGTCA+GGG | 0.520072 | 8_4:+15718792 | Msa1316050:CDS |
| TATTTCTTCAATGCAGTGAT+GGG | 0.524511 | 8_4:-15720558 | None:intergenic |
| GGTCAGAGAAGTGGCGAAGG+AGG | 0.527619 | 8_4:+15719181 | Msa1316050:CDS |
| CTCAGCACATTTGTCTTCAA+AGG | 0.527792 | 8_4:-15718583 | None:intergenic |
| CGAAGACATTCTCTAGAAGC+TGG | 0.528527 | 8_4:-15720698 | None:intergenic |
| GCTGAGAAGGAACACTATGC+TGG | 0.530450 | 8_4:+15720528 | Msa1316050:intron |
| GACAGGGCTAGAAGAGGAGA+AGG | 0.531725 | 8_4:+15719209 | Msa1316050:CDS |
| ATGCCGGGTGTTCATGTCGA+CGG | 0.534762 | 8_4:+15719143 | Msa1316050:CDS |
| CTTCTTGTCCATTGTACAAG+TGG | 0.537841 | 8_4:-15718638 | None:intergenic |
| AATGTCTTCGCCGATCCAAA+AGG | 0.541225 | 8_4:+15720711 | Msa1316050:CDS |
| GTCTCACATTCCACTAAAGT+TGG | 0.543097 | 8_4:-15719233 | None:intergenic |
| GTTCTTTGAGTGTCTGAACA+TGG | 0.549160 | 8_4:+15719001 | Msa1316050:CDS |
| GAAGGAACACTATGCTGGTA+GGG | 0.549726 | 8_4:+15720533 | Msa1316050:CDS |
| AGATCAGAAGAGAAAGAGAG+TGG | 0.552050 | 8_4:-15716964 | None:intergenic |
| AGAAGGAACACTATGCTGGT+AGG | 0.556011 | 8_4:+15720532 | Msa1316050:CDS |
| TTGGAATTGGACCGGATGGA+AGG | 0.556302 | 8_4:+15720736 | Msa1316050:CDS |
| TGTGGTGGAAAACAATTTGT+GGG | 0.561089 | 8_4:+15719052 | Msa1316050:CDS |
| CTTTACTCAACGCGTGAACA+TGG | 0.563353 | 8_4:-15718725 | None:intergenic |
| GAAGGTCAGAGAAGTGGCGA+AGG | 0.564863 | 8_4:+15719178 | Msa1316050:CDS |
| CTTCATGGAAAATGCAGCAC+CGG | 0.565146 | 8_4:-15718895 | None:intergenic |
| GAAGGAATTCCAGTGGCCAC+CGG | 0.565196 | 8_4:+15718876 | Msa1316050:CDS |
| ATTACCAATTGTGTTTGTGG+TGG | 0.566402 | 8_4:+15719037 | Msa1316050:CDS |
| CAGCAACAGGTGGTGATGAA+CGG | 0.566780 | 8_4:-15717056 | None:intergenic |
| CACTCATCACTTCTCGAGAA+GGG | 0.567182 | 8_4:-15718752 | None:intergenic |
| GCTGGCTGCGAAGTGGTGCA+GGG | 0.575928 | 8_4:-15720680 | None:intergenic |
| CAAGAAAAGAGGAAGAAGAA+GGG | 0.576220 | 8_4:-15716999 | None:intergenic |
| GATGAGTGAACTCTTCGGTA+AGG | 0.582580 | 8_4:+15718767 | Msa1316050:CDS |
| TCAAAAGAACACAACGTGCT+CGG | 0.582628 | 8_4:+15718834 | Msa1316050:CDS |
| TCGCATCTATACCTTCCATC+CGG | 0.583539 | 8_4:-15720747 | None:intergenic |
| ATGAAGACATGGTATTAGGA+AGG | 0.584772 | 8_4:+15718559 | Msa1316050:CDS |
| TCACTCATCACTTCTCGAGA+AGG | 0.588915 | 8_4:-15718753 | None:intergenic |
| AGCTTATTACTAAAGAGGAA+GGG | 0.594519 | 8_4:+15718526 | Msa1316050:intron |
| ATATTTCTTCAATGCAGTGA+TGG | 0.596499 | 8_4:-15720559 | None:intergenic |
| GCAATTGACAGGGCTAGAAG+AGG | 0.598579 | 8_4:+15719203 | Msa1316050:CDS |
| GCATTGAACCACCCTGACCT+CGG | 0.598594 | 8_4:-15718803 | None:intergenic |
| GGGTGTTCATGTCGACGGGA+TGG | 0.604889 | 8_4:+15719148 | Msa1316050:CDS |
| TGATTCCGATAACGTGACAT+TGG | 0.606266 | 8_4:+15718944 | Msa1316050:CDS |
| TTCCATGAAGTACAAAAGAG+AGG | 0.611043 | 8_4:+15718908 | Msa1316050:CDS |
| CATGGAAAATGCAGCACCGG+TGG | 0.619965 | 8_4:-15718892 | None:intergenic |
| ATCCCGTCGACATGAACACC+CGG | 0.628474 | 8_4:-15719146 | None:intergenic |
| CCTAAGATGTGACATCCCAA+TGG | 0.632354 | 8_4:-15719075 | None:intergenic |
| GTTAGTCCTTTATGAAGACA+TGG | 0.636628 | 8_4:+15718548 | Msa1316050:CDS |
| TCTAGAAGCTGGCTGCGAAG+TGG | 0.637368 | 8_4:-15720687 | None:intergenic |
| GGCGAAGGAGGCAATTGACA+GGG | 0.640812 | 8_4:+15719193 | Msa1316050:CDS |
| GAGGATCCAAAGTTTACTGA+AGG | 0.642572 | 8_4:+15720768 | Msa1316050:CDS |
| TGTGCTGAGATGTATTATAG+GGG | 0.642715 | 8_4:+15718597 | Msa1316050:CDS |
| CCTGATGAACTTCGTAACCC+TGG | 0.643454 | 8_4:+15719287 | Msa1316050:CDS |
| GTGCTGAGATGTATTATAGG+GGG | 0.644449 | 8_4:+15718598 | Msa1316050:CDS |
| GAAGTGATGAGTGAACTCTT+CGG | 0.646509 | 8_4:+15718762 | Msa1316050:CDS |
| AATAGACAAGAAAATTGATG+AGG | 0.647152 | 8_4:+15720623 | Msa1316050:CDS |
| GGATGGAAGGTATAGATGCG+AGG | 0.649737 | 8_4:+15720749 | Msa1316050:CDS |
| AAGGCGACAGGATGTTGCCG+AGG | 0.666759 | 8_4:+15718786 | Msa1316050:CDS |
| TGTTCACGCGTTGAGTAAAG+GGG | 0.668617 | 8_4:+15718728 | Msa1316050:CDS |
| CATCGGTGAAGGAATTCCAG+TGG | 0.679391 | 8_4:+15718869 | Msa1316050:CDS |
| AGAAGAACAGCAGCAACAGG+TGG | 0.688242 | 8_4:-15717066 | None:intergenic |
| CGAAATCAACAGCATCCTCG+AGG | 0.691090 | 8_4:-15720647 | None:intergenic |
| GAAAATTGATGAGGTCCTCG+AGG | 0.693520 | 8_4:+15720632 | Msa1316050:CDS |
| AAAGAACACAACGTGCTCGG+TGG | 0.701061 | 8_4:+15718837 | Msa1316050:CDS |
| GGATGTTGCCGAGGTCAGGG+TGG | 0.715163 | 8_4:+15718795 | Msa1316050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAAAATTAATGATAAA+GGG | - | chr8_4:15717115-15717134 | None:intergenic | 10.0% |
| !! | AAATGAAAAATTAATGATAA+AGG | - | chr8_4:15717116-15717135 | None:intergenic | 10.0% |
| !!! | TTTTAATTCTAATTTGAAAT+TGG | + | chr8_4:15718036-15718055 | Msa1316050:intron | 10.0% |
| !!! | AACTTTTAAAGTTATAATTT+CGG | + | chr8_4:15720013-15720032 | Msa1316050:intron | 10.0% |
| !!! | AACTTTTAAAGTTATAATTT+CGG | + | chr8_4:15720013-15720032 | Msa1316050:intron | 10.0% |
| !!! | AATATTAATGTTTTTGTTGT+TGG | + | chr8_4:15717721-15717740 | Msa1316050:intron | 15.0% |
| !!! | ATATTAATGTTTTTGTTGTT+GGG | + | chr8_4:15717722-15717741 | Msa1316050:intron | 15.0% |
| !! | ATTAGTGATTTATGATTTAT+GGG | + | chr8_4:15717788-15717807 | Msa1316050:intron | 15.0% |
| !!! | ATAATTGATTTTGACATAAT+TGG | + | chr8_4:15717993-15718012 | Msa1316050:intron | 15.0% |
| !!! | TAATTTGAAATTGGAAATTT+TGG | + | chr8_4:15718045-15718064 | Msa1316050:intron | 15.0% |
| !!! | AATTTGAAATTGGAAATTTT+GGG | + | chr8_4:15718046-15718065 | Msa1316050:intron | 15.0% |
| !! | TGAACAAAAAAAAAAATTTG+AGG | - | chr8_4:15718097-15718116 | None:intergenic | 15.0% |
| !! | GTATGATTAATGAAAATAAA+TGG | - | chr8_4:15718190-15718209 | None:intergenic | 15.0% |
| !! | AAACAGTAATTCATTTAATA+GGG | - | chr8_4:15719556-15719575 | None:intergenic | 15.0% |
| !! | TAAACAGTAATTCATTTAAT+AGG | - | chr8_4:15719557-15719576 | None:intergenic | 15.0% |
| !! | AAACATATGATTATTAACTT+AGG | - | chr8_4:15720152-15720171 | None:intergenic | 15.0% |
| !!! | TATATGTTGATTCTCAATTT+TGG | + | chr8_4:15717465-15717484 | Msa1316050:intron | 20.0% |
| !!! | ATATGTTGATTCTCAATTTT+GGG | + | chr8_4:15717466-15717485 | Msa1316050:intron | 20.0% |
| !! | CATTAGTGATTTATGATTTA+TGG | + | chr8_4:15717787-15717806 | Msa1316050:intron | 20.0% |
| !! | TATTGTGTTATATGTTCAAT+TGG | + | chr8_4:15717818-15717837 | Msa1316050:intron | 20.0% |
| !!! | GGTTTTCAATTGTAAAAAAA+AGG | + | chr8_4:15717897-15717916 | Msa1316050:intron | 20.0% |
| !!! | AGGCTTAAAATCAATTTTAA+AGG | - | chr8_4:15718077-15718096 | None:intergenic | 20.0% |
| !!! | TGCAAATTGATTTTGTTTAA+AGG | - | chr8_4:15718125-15718144 | None:intergenic | 20.0% |
| !! | AAATAAAACAAAAACAAAGC+AGG | - | chr8_4:15718212-15718231 | None:intergenic | 20.0% |
| !!! | ATACTTTTTATGCTTTGAAA+AGG | + | chr8_4:15718459-15718478 | Msa1316050:intron | 20.0% |
| !! | AAACTGAATATAACTGTAAA+AGG | - | chr8_4:15719430-15719449 | None:intergenic | 20.0% |
| !! | TGAGAAAAATATACATCAAA+AGG | - | chr8_4:15719507-15719526 | None:intergenic | 20.0% |
| !!! | TTTTTCTTCTCTAAGTATTT+TGG | + | chr8_4:15719683-15719702 | Msa1316050:intron | 20.0% |
| !!! | AATATATTTTGTAAAACCCT+TGG | - | chr8_4:15719750-15719769 | None:intergenic | 20.0% |
| !! | TCAATCTTTGAATACATATA+TGG | + | chr8_4:15719883-15719902 | Msa1316050:intron | 20.0% |
| !! | CAATCTTTGAATACATATAT+GGG | + | chr8_4:15719884-15719903 | Msa1316050:intron | 20.0% |
| !!! | AACGGTTTTTATAAAAATCT+TGG | - | chr8_4:15720425-15720444 | None:intergenic | 20.0% |
| !!! | GTTTTCATATAAGCTATAAA+CGG | - | chr8_4:15720443-15720462 | None:intergenic | 20.0% |
| !!! | TACATGATACATTTTCTATT+TGG | + | chr8_4:15720503-15720522 | Msa1316050:intron | 20.0% |
| !!! | TATTTATTGATTCTCACTTG+TGG | + | chr8_4:15717165-15717184 | Msa1316050:intron | 25.0% |
| !!! | ATTTATTGATTCTCACTTGT+GGG | + | chr8_4:15717166-15717185 | Msa1316050:intron | 25.0% |
| ! | AAAGTTGAATTGAATCATGT+TGG | + | chr8_4:15717378-15717397 | Msa1316050:intron | 25.0% |
| ! | AAGTTGAATTGAATCATGTT+GGG | + | chr8_4:15717379-15717398 | Msa1316050:intron | 25.0% |
| ! | AAAGCTGAATTGAATCATTT+GGG | + | chr8_4:15717672-15717691 | Msa1316050:intron | 25.0% |
| !!! | TGTAAAAAAAAGGTCTTGTT+TGG | + | chr8_4:15717907-15717926 | Msa1316050:intron | 25.0% |
| !!! | TTCCATTTTTAGTGTATGAT+TGG | + | chr8_4:15717931-15717950 | Msa1316050:intron | 25.0% |
| ! | ATCCAATCATACACTAAAAA+TGG | - | chr8_4:15717936-15717955 | None:intergenic | 25.0% |
| ! | AGAATGAAAATAAACAAAGC+AGG | - | chr8_4:15718153-15718172 | None:intergenic | 25.0% |
| ! | ATTAAAATAAATGCTCACCA+GGG | - | chr8_4:15719307-15719326 | None:intergenic | 25.0% |
| ! | TATTAAAATAAATGCTCACC+AGG | - | chr8_4:15719308-15719327 | None:intergenic | 25.0% |
| !! | TTGATGTTCTTTTGCATTTA+TGG | + | chr8_4:15719370-15719389 | Msa1316050:intron | 25.0% |
| !! | TGATGTTCTTTTGCATTTAT+GGG | + | chr8_4:15719371-15719390 | Msa1316050:intron | 25.0% |
| ! | TTAATAGGGAAGTTATTCTA+AGG | - | chr8_4:15719542-15719561 | None:intergenic | 25.0% |
| ! | AAAAGAAAATCGTATTTGCT+TGG | - | chr8_4:15719646-15719665 | None:intergenic | 25.0% |
| !! | TCTTTTACTTTATTGTTACC+AGG | + | chr8_4:15719660-15719679 | Msa1316050:intron | 25.0% |
| !!! | TTCTCTAAGTATTTTGGAAA+AGG | + | chr8_4:15719689-15719708 | Msa1316050:intron | 25.0% |
| ! | AAATGCTAAAATTACGCATT+TGG | - | chr8_4:15719938-15719957 | None:intergenic | 25.0% |
| !! | TATAGACTTTTATCTCATGA+GGG | + | chr8_4:15720246-15720265 | Msa1316050:intron | 25.0% |
| ! | AATAGACAAGAAAATTGATG+AGG | + | chr8_4:15720623-15720642 | Msa1316050:CDS | 25.0% |
| ATGATAAAGGGTTACCAAAT+TGG | - | chr8_4:15717103-15717122 | None:intergenic | 30.0% | |
| ! | TCATTTTCTCAAATTTCACC+CGG | - | chr8_4:15717530-15717549 | None:intergenic | 30.0% |
| GAAAGCTGAATTGAATCATT+TGG | + | chr8_4:15717671-15717690 | Msa1316050:intron | 30.0% | |
| ! | TGAATTGAATCATTTGGGAT+TGG | + | chr8_4:15717677-15717696 | Msa1316050:intron | 30.0% |
| ! | GAATTGAATCATTTGGGATT+GGG | + | chr8_4:15717678-15717697 | Msa1316050:intron | 30.0% |
| !!! | TAGTTTTGTTGTGCTTTCTA+AGG | + | chr8_4:15717866-15717885 | Msa1316050:intron | 30.0% |
| ! | TGTATGATTGGATTCACTTT+TGG | + | chr8_4:15717943-15717962 | Msa1316050:intron | 30.0% |
| TTGTACTGTGTTGTAAATAG+CGG | + | chr8_4:15718237-15718256 | Msa1316050:intron | 30.0% | |
| ! | TGAAAAGGAGTTTTTCTCTT+AGG | + | chr8_4:15718474-15718493 | Msa1316050:intron | 30.0% |
| !!! | CTTAGGCTGTTATTTTTATC+TGG | + | chr8_4:15718491-15718510 | Msa1316050:intron | 30.0% |
| AGCTTATTACTAAAGAGGAA+GGG | + | chr8_4:15718526-15718545 | Msa1316050:intron | 30.0% | |
| CTAATACCATGTCTTCATAA+AGG | - | chr8_4:15718557-15718576 | None:intergenic | 30.0% | |
| CTTTATGAAGACATGGTATT+AGG | + | chr8_4:15718555-15718574 | Msa1316050:CDS | 30.0% | |
| AATGTGCTGAGATGTATTAT+AGG | + | chr8_4:15718595-15718614 | Msa1316050:CDS | 30.0% | |
| ATGTGCTGAGATGTATTATA+GGG | + | chr8_4:15718596-15718615 | Msa1316050:CDS | 30.0% | |
| TATTATAGGGGGAAAATGTT+TGG | + | chr8_4:15718609-15718628 | Msa1316050:CDS | 30.0% | |
| GAAATTACCAATTGTGTTTG+TGG | + | chr8_4:15719034-15719053 | Msa1316050:CDS | 30.0% | |
| ! | GATGTTCTTTTGCATTTATG+GGG | + | chr8_4:15719372-15719391 | Msa1316050:intron | 30.0% |
| ! | ATGTTCTTTTGCATTTATGG+GGG | + | chr8_4:15719373-15719392 | Msa1316050:intron | 30.0% |
| ! | AAGTTATTCTAAGGAAGCTT+GGG | - | chr8_4:15719533-15719552 | None:intergenic | 30.0% |
| ATACTTAGAGAAGAAAAACC+TGG | - | chr8_4:15719681-15719700 | None:intergenic | 30.0% | |
| CTCATGAGATAAAAGTCTAT+AGG | - | chr8_4:15720247-15720266 | None:intergenic | 30.0% | |
| ! | CTATAGACTTTTATCTCATG+AGG | + | chr8_4:15720245-15720264 | Msa1316050:intron | 30.0% |
| ! | ATAGACTTTTATCTCATGAG+GGG | + | chr8_4:15720247-15720266 | Msa1316050:intron | 30.0% |
| TCAAATAAGACAATCCAAAC+AGG | - | chr8_4:15720299-15720318 | None:intergenic | 30.0% | |
| TATTTCTTCAATGCAGTGAT+GGG | - | chr8_4:15720561-15720580 | None:intergenic | 30.0% | |
| ATATTTCTTCAATGCAGTGA+TGG | - | chr8_4:15720562-15720581 | None:intergenic | 30.0% | |
| ! | AATTCCAAAACCTTTTGGAT+CGG | - | chr8_4:15720724-15720743 | None:intergenic | 30.0% |
| ! | AAGAAGAGAGTGTGAGAATT+TGG | - | chr8_4:15716902-15716921 | None:intergenic | 35.0% |
| CTTGGAGTTGAAGAATTGAT+AGG | - | chr8_4:15716931-15716950 | None:intergenic | 35.0% | |
| AGTGGTTTATCATTGGATCT+TGG | - | chr8_4:15716949-15716968 | None:intergenic | 35.0% | |
| GAAAGAGAGTGGTTTATCAT+TGG | - | chr8_4:15716956-15716975 | None:intergenic | 35.0% | |
| CAAGAAAAGAGGAAGAAGAA+GGG | - | chr8_4:15717002-15717021 | None:intergenic | 35.0% | |
| TCTTCAACAAACCTCCAATT+TGG | + | chr8_4:15717086-15717105 | Msa1316050:CDS | 35.0% | |
| ATAAAGGGTTACCAAATTGG+AGG | - | chr8_4:15717100-15717119 | None:intergenic | 35.0% | |
| TGAATTGAATCATGTTGGGT+TGG | + | chr8_4:15717383-15717402 | Msa1316050:intron | 35.0% | |
| GAATTGAATCATGTTGGGTT+GGG | + | chr8_4:15717384-15717403 | Msa1316050:intron | 35.0% | |
| !! | ATGATTGGATTCACTTTTGG+AGG | + | chr8_4:15717946-15717965 | Msa1316050:intron | 35.0% |
| TTGTCAACTAGATGCTATAG+CGG | + | chr8_4:15718334-15718353 | Msa1316050:intron | 35.0% | |
| CTTGCAGCTTATTACTAAAG+AGG | + | chr8_4:15718521-15718540 | Msa1316050:intron | 35.0% | |
| CAGCTTATTACTAAAGAGGA+AGG | + | chr8_4:15718525-15718544 | Msa1316050:intron | 35.0% | |
| GTTAGTCCTTTATGAAGACA+TGG | + | chr8_4:15718548-15718567 | Msa1316050:CDS | 35.0% | |
| ATGAAGACATGGTATTAGGA+AGG | + | chr8_4:15718559-15718578 | Msa1316050:CDS | 35.0% | |
| TGTGCTGAGATGTATTATAG+GGG | + | chr8_4:15718597-15718616 | Msa1316050:CDS | 35.0% | |
| CCTCAAATACTTGATGAATC+CGG | - | chr8_4:15718673-15718692 | None:intergenic | 35.0% | |
| TTCCATGAAGTACAAAAGAG+AGG | + | chr8_4:15718908-15718927 | Msa1316050:CDS | 35.0% | |
| AAATGCCAATGTCACGTTAT+CGG | - | chr8_4:15718952-15718971 | None:intergenic | 35.0% | |
| ! | AACGTGACATTGGCATTTTT+CGG | + | chr8_4:15718954-15718973 | Msa1316050:CDS | 35.0% |
| GGAGATGGAACTTGTAATAA+TGG | + | chr8_4:15718975-15718994 | Msa1316050:CDS | 35.0% | |
| ATTACCAATTGTGTTTGTGG+TGG | + | chr8_4:15719037-15719056 | Msa1316050:CDS | 35.0% | |
| ! | TTTTCCACCACAAACACAAT+TGG | - | chr8_4:15719044-15719063 | None:intergenic | 35.0% |
| ! | TTGTGGTGGAAAACAATTTG+TGG | + | chr8_4:15719051-15719070 | Msa1316050:CDS | 35.0% |
| ! | TGTGGTGGAAAACAATTTGT+GGG | + | chr8_4:15719052-15719071 | Msa1316050:CDS | 35.0% |
| AAAACAATTTGTGGGCCATT+GGG | + | chr8_4:15719060-15719079 | Msa1316050:CDS | 35.0% | |
| TGTGAGACTTACAGATTTAG+AGG | + | chr8_4:15719248-15719267 | Msa1316050:CDS | 35.0% | |
| CAGATTTAGAGGACATTCAT+TGG | + | chr8_4:15719259-15719278 | Msa1316050:CDS | 35.0% | |
| ! | CAAGAATTCTAAAGGAAGCT+AGG | - | chr8_4:15719456-15719475 | None:intergenic | 35.0% |
| AGCGTCTTCAAGAATTCTAA+AGG | - | chr8_4:15719464-15719483 | None:intergenic | 35.0% | |
| ! | GAAGTTATTCTAAGGAAGCT+TGG | - | chr8_4:15719534-15719553 | None:intergenic | 35.0% |
| GAAAATCGTATTTGCTTGGT+TGG | - | chr8_4:15719642-15719661 | None:intergenic | 35.0% | |
| TTTGTAAAACCCTTGGAACA+AGG | - | chr8_4:15719743-15719762 | None:intergenic | 35.0% | |
| CTTAGGATGACATCTACAAA+GGG | - | chr8_4:15720135-15720154 | None:intergenic | 35.0% | |
| ACTTAGGATGACATCTACAA+AGG | - | chr8_4:15720136-15720155 | None:intergenic | 35.0% | |
| TAAATACTCGTGAGACTGAT+TGG | + | chr8_4:15720334-15720353 | Msa1316050:intron | 35.0% | |
| AAATACTCGTGAGACTGATT+GGG | + | chr8_4:15720335-15720354 | Msa1316050:intron | 35.0% | |
| !!! | GATCCAAAAGGTTTTGGAAT+TGG | + | chr8_4:15720723-15720742 | Msa1316050:CDS | 35.0% |
| !!! | AAAAGGTTTTGGAATTGGAC+CGG | + | chr8_4:15720728-15720747 | Msa1316050:CDS | 35.0% |
| AGATCAGAAGAGAAAGAGAG+TGG | - | chr8_4:15716967-15716986 | None:intergenic | 40.0% | |
| CCAAGAAAAGAGGAAGAAGA+AGG | - | chr8_4:15717003-15717022 | None:intergenic | 40.0% | |
| ! | CCTTCTTCTTCCTCTTTTCT+TGG | + | chr8_4:15717000-15717019 | Msa1316050:CDS | 40.0% |
| CTGAGTAGATCCAAGAAAAG+AGG | - | chr8_4:15717013-15717032 | None:intergenic | 40.0% | |
| AAGTGTATCCGATATCCAAC+AGG | - | chr8_4:15717299-15717318 | None:intergenic | 40.0% | |
| ACACTTTCGATCAGATGTGT+CGG | + | chr8_4:15717313-15717332 | Msa1316050:intron | 40.0% | |
| ACATGTGTATGTGTCTGACA+TGG | - | chr8_4:15717578-15717597 | None:intergenic | 40.0% | |
| TGTCAGACACATACACATGT+TGG | + | chr8_4:15717578-15717597 | Msa1316050:intron | 40.0% | |
| CACATACACATGTTGGACAT+CGG | + | chr8_4:15717585-15717604 | Msa1316050:intron | 40.0% | |
| ACGTCTTCAATCAGATGTGT+CGG | + | chr8_4:15717610-15717629 | Msa1316050:intron | 40.0% | |
| !! | GTGCTTTCTAAGGTCTTCTT+TGG | + | chr8_4:15717876-15717895 | Msa1316050:intron | 40.0% |
| GTTATAGCCTTCTTGTGTAG+CGG | + | chr8_4:15718367-15718386 | Msa1316050:intron | 40.0% | |
| TAAGATTCCGCTACACAAGA+AGG | - | chr8_4:15718377-15718396 | None:intergenic | 40.0% | |
| CTCAGCACATTTGTCTTCAA+AGG | - | chr8_4:15718586-15718605 | None:intergenic | 40.0% | |
| GTGCTGAGATGTATTATAGG+GGG | + | chr8_4:15718598-15718617 | Msa1316050:CDS | 40.0% | |
| !! | GGTTTTGTCCACTTGTACAA+TGG | + | chr8_4:15718630-15718649 | Msa1316050:CDS | 40.0% |
| CTTCTTGTCCATTGTACAAG+TGG | - | chr8_4:15718641-15718660 | None:intergenic | 40.0% | |
| CCGGATTCATCAAGTATTTG+AGG | + | chr8_4:15718670-15718689 | Msa1316050:CDS | 40.0% | |
| ATGTTCACGCGTTGAGTAAA+GGG | + | chr8_4:15718727-15718746 | Msa1316050:CDS | 40.0% | |
| GAAGTGATGAGTGAACTCTT+CGG | + | chr8_4:15718762-15718781 | Msa1316050:CDS | 40.0% | |
| TCAAAAGAACACAACGTGCT+CGG | + | chr8_4:15718834-15718853 | Msa1316050:CDS | 40.0% | |
| ! | CACCTCTCTTTTGTACTTCA+TGG | - | chr8_4:15718913-15718932 | None:intergenic | 40.0% |
| !! | CAAAAGAGAGGTGTTGAATC+AGG | + | chr8_4:15718920-15718939 | Msa1316050:CDS | 40.0% |
| TGATTCCGATAACGTGACAT+TGG | + | chr8_4:15718944-15718963 | Msa1316050:CDS | 40.0% | |
| !! | ACATTGGCATTTTTCGGAGA+TGG | + | chr8_4:15718960-15718979 | Msa1316050:CDS | 40.0% |
| GTTCTTTGAGTGTCTGAACA+TGG | + | chr8_4:15719001-15719020 | Msa1316050:CDS | 40.0% | |
| GAAAACAATTTGTGGGCCAT+TGG | + | chr8_4:15719059-15719078 | Msa1316050:CDS | 40.0% | |
| CATTGGGATGTCACATCTTA+GGG | + | chr8_4:15719076-15719095 | Msa1316050:CDS | 40.0% | |
| AGACCCTCAGATATGGAAAA+AGG | + | chr8_4:15719106-15719125 | Msa1316050:CDS | 40.0% | |
| GACCCTCAGATATGGAAAAA+GGG | + | chr8_4:15719107-15719126 | Msa1316050:CDS | 40.0% | |
| ! | GACCCTTTTTCCATATCTGA+GGG | - | chr8_4:15719112-15719131 | None:intergenic | 40.0% |
| !!! | TGTTTTGAAGGTCAGAGAAG+TGG | + | chr8_4:15719172-15719191 | Msa1316050:CDS | 40.0% |
| GTCTCACATTCCACTAAAGT+TGG | - | chr8_4:15719236-15719255 | None:intergenic | 40.0% | |
| ATCAAAAGGCAATGACCAAG+AGG | - | chr8_4:15719493-15719512 | None:intergenic | 40.0% | |
| ! | GGTTGGTATCATCAATGATG+TGG | - | chr8_4:15719625-15719644 | None:intergenic | 40.0% |
| AACCAATCAACCTTGTTCCA+AGG | + | chr8_4:15719730-15719749 | Msa1316050:intron | 40.0% | |
| ACCAATCAACCTTGTTCCAA+GGG | + | chr8_4:15719731-15719750 | Msa1316050:intron | 40.0% | |
| ! | AAGCCACATCTTTTTGTTCG+CGG | + | chr8_4:15720272-15720291 | Msa1316050:intron | 40.0% |
| TTTCTATTTGGCAGCTGAGA+AGG | + | chr8_4:15720515-15720534 | Msa1316050:intron | 40.0% | |
| AGCCACTGAACAAGAATTGA+AGG | + | chr8_4:15720599-15720618 | Msa1316050:CDS | 40.0% | |
| TGCCTTCAATTCTTGTTCAG+TGG | - | chr8_4:15720604-15720623 | None:intergenic | 40.0% | |
| ! | GGTCCAATTCCAAAACCTTT+TGG | - | chr8_4:15720729-15720748 | None:intergenic | 40.0% |
| GAGGATCCAAAGTTTACTGA+AGG | + | chr8_4:15720768-15720787 | Msa1316050:CDS | 40.0% | |
| TGAAGAAGAACAGCAGCAAC+AGG | - | chr8_4:15717072-15717091 | None:intergenic | 45.0% | |
| ACTGAGTCTTAGAGTGACAC+TGG | + | chr8_4:15717211-15717230 | Msa1316050:intron | 45.0% | |
| ! | AGATGTGTCGATGTCAGACA+TGG | + | chr8_4:15717270-15717289 | Msa1316050:intron | 45.0% |
| CATGGACACCTGTTGGATAT+CGG | + | chr8_4:15717288-15717307 | Msa1316050:intron | 45.0% | |
| !! | TATGAAGCACTGACACACAC+TGG | + | chr8_4:15717490-15717509 | Msa1316050:intron | 45.0% |
| TAGATGCTATAGCGGTGTGA+AGG | + | chr8_4:15718342-15718361 | Msa1316050:intron | 45.0% | |
| GTGTATTCGATCGTGGATAG+AGG | - | chr8_4:15718415-15718434 | None:intergenic | 45.0% | |
| CAAAGCAGTGTATTCGATCG+TGG | - | chr8_4:15718422-15718441 | None:intergenic | 45.0% | |
| ! | GGACAAGAAGCTGTTTCAAC+CGG | + | chr8_4:15718651-15718670 | Msa1316050:CDS | 45.0% |
| CTTTACTCAACGCGTGAACA+TGG | - | chr8_4:15718728-15718747 | None:intergenic | 45.0% | |
| CATGTTCACGCGTTGAGTAA+AGG | + | chr8_4:15718726-15718745 | Msa1316050:CDS | 45.0% | |
| TGTTCACGCGTTGAGTAAAG+GGG | + | chr8_4:15718728-15718747 | Msa1316050:CDS | 45.0% | |
| CACTCATCACTTCTCGAGAA+GGG | - | chr8_4:15718755-15718774 | None:intergenic | 45.0% | |
| TCACTCATCACTTCTCGAGA+AGG | - | chr8_4:15718756-15718775 | None:intergenic | 45.0% | |
| GATGAGTGAACTCTTCGGTA+AGG | + | chr8_4:15718767-15718786 | Msa1316050:CDS | 45.0% | |
| !! | CTCGGTGGTTTTGCATTCAT+CGG | + | chr8_4:15718852-15718871 | Msa1316050:CDS | 45.0% |
| ! | GGTTTTGCATTCATCGGTGA+AGG | + | chr8_4:15718858-15718877 | Msa1316050:CDS | 45.0% |
| CTTCATGGAAAATGCAGCAC+CGG | - | chr8_4:15718898-15718917 | None:intergenic | 45.0% | |
| CCTAAGATGTGACATCCCAA+TGG | - | chr8_4:15719078-15719097 | None:intergenic | 45.0% | |
| CCATTGGGATGTCACATCTT+AGG | + | chr8_4:15719075-15719094 | Msa1316050:CDS | 45.0% | |
| CAACTTCAGACCCTCAGATA+TGG | + | chr8_4:15719099-15719118 | Msa1316050:CDS | 45.0% | |
| ! | GGACCCTTTTTCCATATCTG+AGG | - | chr8_4:15719113-15719132 | None:intergenic | 45.0% |
| TGGAAAAAGGGTCCAGCATT+CGG | + | chr8_4:15719119-15719138 | Msa1316050:CDS | 45.0% | |
| AGGAGAAGGACCAACTTTAG+TGG | + | chr8_4:15719223-15719242 | Msa1316050:CDS | 45.0% | |
| GAAGACGCTAAACTTCCTCT+TGG | + | chr8_4:15719475-15719494 | Msa1316050:intron | 45.0% | |
| ! | ACCCTTGGAACAAGGTTGAT+TGG | - | chr8_4:15719735-15719754 | None:intergenic | 45.0% |
| CAGTCTGAATAGTTAGAGCG+TGG | + | chr8_4:15719774-15719793 | Msa1316050:intron | 45.0% | |
| ACTGTTCTGCAGTCAACAAC+TGG | - | chr8_4:15719822-15719841 | None:intergenic | 45.0% | |
| !! | CTTGACGTCAGTTGTTTTGC+TGG | + | chr8_4:15719860-15719879 | Msa1316050:intron | 45.0% |
| TGATACTTCTAGCGCATCGT+TGG | + | chr8_4:15720041-15720060 | Msa1316050:intron | 45.0% | |
| ! | TTTTTGTTCGCGGTCCTGTT+TGG | + | chr8_4:15720282-15720301 | Msa1316050:intron | 45.0% |
| AGACTGATTGGGAGAGCTTA+TGG | + | chr8_4:15720346-15720365 | Msa1316050:intron | 45.0% | |
| AGAAGGAACACTATGCTGGT+AGG | + | chr8_4:15720532-15720551 | Msa1316050:CDS | 45.0% | |
| GAAGGAACACTATGCTGGTA+GGG | + | chr8_4:15720533-15720552 | Msa1316050:CDS | 45.0% | |
| GAAAATTGATGAGGTCCTCG+AGG | + | chr8_4:15720632-15720651 | Msa1316050:CDS | 45.0% | |
| ! | CGAAGACATTCTCTAGAAGC+TGG | - | chr8_4:15720701-15720720 | None:intergenic | 45.0% |
| AATGTCTTCGCCGATCCAAA+AGG | + | chr8_4:15720711-15720730 | Msa1316050:CDS | 45.0% | |
| ! | TTCGCCGATCCAAAAGGTTT+TGG | + | chr8_4:15720717-15720736 | Msa1316050:CDS | 45.0% |
| TCGCATCTATACCTTCCATC+CGG | - | chr8_4:15720750-15720769 | None:intergenic | 45.0% | |
| GCAGTGCCTTCAGTAAACTT+TGG | - | chr8_4:15720777-15720796 | None:intergenic | 45.0% | |
| ! | CAGCAACAGGTGGTGATGAA+CGG | - | chr8_4:15717059-15717078 | None:intergenic | 50.0% |
| AGAAGAACAGCAGCAACAGG+TGG | - | chr8_4:15717069-15717088 | None:intergenic | 50.0% | |
| TGTCAGACATGGACACCTGT+TGG | + | chr8_4:15717281-15717300 | Msa1316050:intron | 50.0% | |
| AAAGAACACAACGTGCTCGG+TGG | + | chr8_4:15718837-15718856 | Msa1316050:CDS | 50.0% | |
| CATCGGTGAAGGAATTCCAG+TGG | + | chr8_4:15718869-15718888 | Msa1316050:CDS | 50.0% | |
| ! | GTCTGAACATGGCTGCTTTG+TGG | + | chr8_4:15719012-15719031 | Msa1316050:CDS | 50.0% |
| !! | CGACGGGATGGATGTTTTGA+AGG | + | chr8_4:15719160-15719179 | Msa1316050:CDS | 50.0% |
| GCAATTGACAGGGCTAGAAG+AGG | + | chr8_4:15719203-15719222 | Msa1316050:CDS | 50.0% | |
| CCAGGGTTACGAAGTTCATC+AGG | - | chr8_4:15719290-15719309 | None:intergenic | 50.0% | |
| CCTGATGAACTTCGTAACCC+TGG | + | chr8_4:15719287-15719306 | Msa1316050:CDS | 50.0% | |
| GTTGACTGCAGAACAGTGAC+TGG | + | chr8_4:15719825-15719844 | Msa1316050:intron | 50.0% | |
| GGACCGCGAACAAAAAGATG+TGG | - | chr8_4:15720278-15720297 | None:intergenic | 50.0% | |
| GCTGAGAAGGAACACTATGC+TGG | + | chr8_4:15720528-15720547 | Msa1316050:intron | 50.0% | |
| CGAAATCAACAGCATCCTCG+AGG | - | chr8_4:15720650-15720669 | None:intergenic | 50.0% | |
| !!! | GGTTTTGGAATTGGACCGGA+TGG | + | chr8_4:15720732-15720751 | Msa1316050:CDS | 50.0% |
| TTGGAATTGGACCGGATGGA+AGG | + | chr8_4:15720736-15720755 | Msa1316050:CDS | 50.0% | |
| ! | GGATGGAAGGTATAGATGCG+AGG | + | chr8_4:15720749-15720768 | Msa1316050:CDS | 50.0% |
| !! | GGGCTATGAAGCACTGACAC+TGG | + | chr8_4:15717186-15717205 | Msa1316050:intron | 55.0% |
| ACTGGACACGAGAGTGACAC+CGG | + | chr8_4:15717508-15717527 | Msa1316050:intron | 55.0% | |
| GAACTCTTCGGTAAGGCGAC+AGG | + | chr8_4:15718774-15718793 | Msa1316050:CDS | 55.0% | |
| ACAGGATGTTGCCGAGGTCA+GGG | + | chr8_4:15718792-15718811 | Msa1316050:CDS | 55.0% | |
| GCATTGAACCACCCTGACCT+CGG | - | chr8_4:15718806-15718825 | None:intergenic | 55.0% | |
| GAAGGAATTCCAGTGGCCAC+CGG | + | chr8_4:15718876-15718895 | Msa1316050:CDS | 55.0% | |
| ! | CATGGAAAATGCAGCACCGG+TGG | - | chr8_4:15718895-15718914 | None:intergenic | 55.0% |
| ATGCCGGGTGTTCATGTCGA+CGG | + | chr8_4:15719143-15719162 | Msa1316050:CDS | 55.0% | |
| ATCCCGTCGACATGAACACC+CGG | - | chr8_4:15719149-15719168 | None:intergenic | 55.0% | |
| GAAGGTCAGAGAAGTGGCGA+AGG | + | chr8_4:15719178-15719197 | Msa1316050:CDS | 55.0% | |
| TGGCGAAGGAGGCAATTGAC+AGG | + | chr8_4:15719192-15719211 | Msa1316050:CDS | 55.0% | |
| GGCGAAGGAGGCAATTGACA+GGG | + | chr8_4:15719193-15719212 | Msa1316050:CDS | 55.0% | |
| GACAGGGCTAGAAGAGGAGA+AGG | + | chr8_4:15719209-15719228 | Msa1316050:CDS | 55.0% | |
| TCTAGAAGCTGGCTGCGAAG+TGG | - | chr8_4:15720690-15720709 | None:intergenic | 55.0% | |
| CTGGACACGAGAGTGACACC+GGG | + | chr8_4:15717509-15717528 | Msa1316050:intron | 60.0% | |
| AAGGCGACAGGATGTTGCCG+AGG | + | chr8_4:15718786-15718805 | Msa1316050:CDS | 60.0% | |
| GACAGGATGTTGCCGAGGTC+AGG | + | chr8_4:15718791-15718810 | Msa1316050:CDS | 60.0% | |
| GGGTCCAGCATTCGGAATGC+CGG | + | chr8_4:15719127-15719146 | Msa1316050:CDS | 60.0% | |
| GGTCCAGCATTCGGAATGCC+GGG | + | chr8_4:15719128-15719147 | Msa1316050:CDS | 60.0% | |
| ACACCCGGCATTCCGAATGC+TGG | - | chr8_4:15719134-15719153 | None:intergenic | 60.0% | |
| TGCCGGGTGTTCATGTCGAC+GGG | + | chr8_4:15719144-15719163 | Msa1316050:CDS | 60.0% | |
| GGGTGTTCATGTCGACGGGA+TGG | + | chr8_4:15719148-15719167 | Msa1316050:CDS | 60.0% | |
| GGTCAGAGAAGTGGCGAAGG+AGG | + | chr8_4:15719181-15719200 | Msa1316050:CDS | 60.0% | |
| GGATGTTGCCGAGGTCAGGG+TGG | + | chr8_4:15718795-15718814 | Msa1316050:CDS | 65.0% | |
| !! | AATGCAGCACCGGTGGCCAC+TGG | - | chr8_4:15718888-15718907 | None:intergenic | 65.0% |
| GCTGGCTGCGAAGTGGTGCA+GGG | - | chr8_4:15720683-15720702 | None:intergenic | 65.0% | |
| AGCTGGCTGCGAAGTGGTGC+AGG | - | chr8_4:15720684-15720703 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 15716883 | 15720806 | 15716883 | ID=Msa1316050;Name=Msa1316050 |
| chr8_4 | mRNA | 15716883 | 15720806 | 15716883 | ID=Msa1316050-mRNA-1;Parent=Msa1316050;Name=Msa1316050-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|427 |
| chr8_4 | exon | 15716883 | 15717107 | 15716883 | ID=Msa1316050-mRNA-1:exon:6035;Parent=Msa1316050-mRNA-1 |
| chr8_4 | exon | 15718528 | 15719308 | 15718528 | ID=Msa1316050-mRNA-1:exon:6036;Parent=Msa1316050-mRNA-1 |
| chr8_4 | exon | 15720529 | 15720806 | 15720529 | ID=Msa1316050-mRNA-1:exon:6037;Parent=Msa1316050-mRNA-1 |
| chr8_4 | CDS | 15716883 | 15717107 | 15716883 | ID=Msa1316050-mRNA-1:cds;Parent=Msa1316050-mRNA-1 |
| chr8_4 | CDS | 15718528 | 15719308 | 15718528 | ID=Msa1316050-mRNA-1:cds;Parent=Msa1316050-mRNA-1 |
| chr8_4 | CDS | 15720529 | 15720806 | 15720529 | ID=Msa1316050-mRNA-1:cds;Parent=Msa1316050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
