AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0162050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0162050 MtrunA17_Chr1g0187011 97.017 838 25 0 1 838 1 838 0.0 1672
Msa0162050 MtrunA17_Chr4g0071101 49.918 609 281 6 187 783 148 744 0.0 588
Msa0162050 MtrunA17_Chr6g0484411 45.017 602 307 7 193 788 195 778 3.34e-165 500
Msa0162050 MtrunA17_Chr6g0451621 42.065 649 333 8 205 838 145 765 7.96e-159 490
Msa0162050 MtrunA17_Chr8g0391141 42.162 555 258 8 208 750 100 603 1.25e-136 420
Msa0162050 MtrunA17_Chr2g0330811 40.753 611 337 9 180 770 139 744 1.50e-131 410
Msa0162050 MtrunA17_Chr8g0366041 39.749 239 110 3 222 444 1 221 2.00e-52 182
Msa0162050 MtrunA17_Chr1g0171521 39.583 144 81 3 596 737 125 264 1.25e-24 104
Msa0162050 MtrunA17_Chr4g0067911 35.294 187 117 2 592 778 163 345 4.65e-24 104
Msa0162050 MtrunA17_Chr4g0033621 36.496 137 84 1 627 763 170 303 1.17e-19 92.8
Msa0162050 MtrunA17_Chr8g0391361 34.694 147 92 2 592 738 9 151 2.47e-19 86.3
Msa0162050 MtrunA17_Chr6g0449261 30.108 279 162 9 566 819 77 347 3.38e-17 86.3
Msa0162050 MtrunA17_Chr8g0366051 38.947 95 58 0 509 603 7 101 5.06e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0162050 AT3G23070.1 59.927 821 281 16 1 793 1 801 0.0 905
Msa0162050 AT4G14510.1 59.583 720 238 9 111 793 125 828 0.0 827
Msa0162050 AT4G29750.1 45.911 697 329 12 133 819 181 839 0.0 574
Msa0162050 AT4G29750.2 46.508 673 313 13 133 795 181 816 0.0 567
Msa0162050 AT3G18390.1 46.411 599 304 4 179 769 203 792 5.05e-176 529
Msa0162050 AT3G01370.1 40.873 756 396 12 109 834 58 792 2.43e-170 520
Msa0162050 AT5G16180.1 38.585 622 298 10 176 791 177 720 6.81e-113 361
Msa0162050 AT5G16180.2 36.512 430 204 8 176 600 177 542 6.83e-63 221
Msa0162050 AT3G25440.2 35.714 182 109 3 594 770 74 252 2.86e-27 115
Msa0162050 AT3G25440.1 35.714 182 109 3 594 770 138 316 8.87e-27 115
Msa0162050 AT3G25440.4 36.076 158 93 3 618 770 7 161 8.69e-26 108
Msa0162050 AT3G25440.3 36.076 158 93 3 618 770 7 161 8.69e-26 108
Msa0162050 AT3G25440.5 36.076 158 93 3 618 770 7 161 8.69e-26 108
Msa0162050 AT4G13070.1 39.759 166 91 4 592 756 145 302 9.52e-23 100
Msa0162050 AT2G28480.1 38.686 137 81 1 627 763 161 294 5.90e-21 96.3
Msa0162050 AT3G27550.3 36.364 143 81 4 626 766 88 222 1.30e-15 80.9
Msa0162050 AT3G27550.1 36.364 143 81 4 626 766 88 222 1.30e-15 80.9
Msa0162050 AT3G27550.2 36.364 143 81 4 626 766 144 278 1.39e-15 81.3
Msa0162050 AT5G54890.1 35.664 143 75 7 164 301 104 234 7.88e-11 65.1

Find 214 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCAAGAAGTCTTTATTTC+TGG 0.089553 1_4:-38219586 None:intergenic
GTTGAGAAATTGAAGAAATT+TGG 0.119699 1_4:+38217247 Msa0162050:CDS
TCTTCATCGGTTATACTTTC+AGG 0.150823 1_4:-38220769 None:intergenic
CTCTTTGTCAAGAGATTCTT+TGG 0.173441 1_4:-38221267 None:intergenic
AAACCCCGCGTGGCGGTTTC+GGG 0.183163 1_4:-38217129 None:intergenic
GAAGAAGGAGTGATAGAAAA+AGG 0.185976 1_4:+38217301 Msa0162050:CDS
AAAACCCCGCGTGGCGGTTT+CGG 0.209054 1_4:-38217130 None:intergenic
AGATTTATGTTTCGGAAATT+AGG 0.239341 1_4:+38220793 Msa0162050:CDS
CTCCAGAAATAAAGACTTCT+TGG 0.246222 1_4:+38219584 Msa0162050:CDS
TAATTGCTTATACACTATTA+AGG 0.248837 1_4:+38223474 Msa0162050:three_prime_UTR
TGGTTGTTCTTACTCTGTTC+TGG 0.271808 1_4:-38216793 None:intergenic
CCCTTCAGAGTTCTTCCTTT+CGG 0.281539 1_4:+38218697 Msa0162050:CDS
TTGAGAAATTGAAGAAATTT+GGG 0.281718 1_4:+38217248 Msa0162050:CDS
AATTATCAAGGTTCTGGAAA+TGG 0.293760 1_4:+38217154 Msa0162050:CDS
ATGAAAGCTTTCTTACTTCT+TGG 0.300263 1_4:+38220823 Msa0162050:CDS
TTAACATATGCTTGAGGAAT+AGG 0.312732 1_4:+38223566 Msa0162050:three_prime_UTR
GATATTCTATACTTGTTTAC+CGG 0.312793 1_4:+38221211 Msa0162050:CDS
ATGCTTTCTCCAACTGTTCC+TGG 0.313078 1_4:+38218664 Msa0162050:CDS
GAAATTGAAGATGAAGATTC+TGG 0.316685 1_4:-38216813 None:intergenic
AGCTCTGATGATGAAGATTT+TGG 0.318847 1_4:+38217202 Msa0162050:CDS
ATGAAGAGAGATTTATGTTT+CGG 0.326409 1_4:+38220785 Msa0162050:CDS
AGCTGAGAGTGGTGGTGTTC+TGG 0.328282 1_4:+38221164 Msa0162050:CDS
TCATCTTCATAACTGACTTT+TGG 0.336078 1_4:-38218562 None:intergenic
TGTTTATTCTGTTGTATTGA+AGG 0.336472 1_4:-38218385 None:intergenic
CTCCTCATCCTGCATTGCTT+TGG 0.339324 1_4:-38219676 None:intergenic
GGAAGACTTCTGAGATTGTT+AGG 0.341719 1_4:+38217650 Msa0162050:CDS
AGATGAAGTAGACAAGTTAT+TGG 0.342599 1_4:+38218579 Msa0162050:CDS
GAATGAAGAGTGGAAATTAA+AGG 0.350423 1_4:-38216856 None:intergenic
GAAGAGGATGCATGAGATAT+TGG 0.355195 1_4:+38217705 Msa0162050:CDS
ATCAATAGTACGTACTATTT+CGG 0.357584 1_4:-38222807 None:intergenic
CCATTTGGGATTGGAAGTTA+TGG 0.366402 1_4:+38217397 Msa0162050:CDS
GCCTCACAAAATTGAAGGTC+AGG 0.369104 1_4:+38223273 Msa0162050:exon
AAACTGGTGGTCTGGTGATT+TGG 0.369744 1_4:+38218314 Msa0162050:CDS
CGGAGAGAATGATGAAAGTT+AGG 0.370791 1_4:-38216950 None:intergenic
AGCAGTGACACTTAATTCAT+TGG 0.375241 1_4:+38223340 Msa0162050:three_prime_UTR
CCAATCCCAAATGGTGATTC+CGG 0.385507 1_4:-38217388 None:intergenic
AAGACACCTCCACCTTCGTT+AGG 0.386983 1_4:-38220720 None:intergenic
TCAGCGGAGGCTGGGACTCT+TGG 0.390512 1_4:+38219759 Msa0162050:CDS
AAGAGTGGAAATTAAAGGAT+TGG 0.392252 1_4:-38216851 None:intergenic
ACTAGTACTGGATAGAAAAC+TGG 0.398835 1_4:-38216746 None:intergenic
ATTATCAAGGTTCTGGAAAT+GGG 0.399633 1_4:+38217155 Msa0162050:CDS
CTTCATCGGTTATACTTTCA+GGG 0.406225 1_4:-38220768 None:intergenic
TTTCGCCGGAATCACCATTT+GGG 0.408552 1_4:+38217383 Msa0162050:CDS
TATCAGTGCAGAAACTCTTA+TGG 0.409703 1_4:-38217075 None:intergenic
ATTGTATAACAGATTAGATT+CGG 0.413344 1_4:+38222961 Msa0162050:CDS
CAATTATCTTGACCAGTTCC+CGG 0.415828 1_4:-38221092 None:intergenic
GAGACCGACACTTGGTTTCA+AGG 0.416038 1_4:+38218723 Msa0162050:CDS
TTCTTTGGTCTCATCATTGA+AGG 0.417775 1_4:-38221252 None:intergenic
CTTGACAAAGAGAAAGGCTT+TGG 0.418224 1_4:+38221278 Msa0162050:CDS
GAAAACCCACCTCTTGTATT+AGG 0.419315 1_4:-38217364 None:intergenic
GAAGAAGAGTAAGACTTCTA+TGG 0.420084 1_4:+38217501 Msa0162050:CDS
CCAGGCCAATCTGTATATCT+AGG 0.423225 1_4:-38218613 None:intergenic
TGTGAAATATAGGTAGAAAC+AGG 0.425010 1_4:+38218869 Msa0162050:intron
TCAGAGTTGTCAGCGGAGGC+TGG 0.425100 1_4:+38219750 Msa0162050:CDS
GTGGTGAAGTGAGGTTTCCT+TGG 0.428101 1_4:+38217431 Msa0162050:CDS
TCAACTTCTTCATCCACTAC+TGG 0.428246 1_4:-38217460 None:intergenic
GGTCTGGTGATTTGGAGGTC+TGG 0.432516 1_4:+38218322 Msa0162050:CDS
CCGGAATCACCATTTGGGAT+TGG 0.439424 1_4:+38217388 Msa0162050:CDS
GAGATCATAGAGTATGCAAT+TGG 0.439472 1_4:+38223436 Msa0162050:intron
AACAGAATAAACAGTTATAT+AGG 0.443141 1_4:+38218395 Msa0162050:CDS
CTCTTCTGCCATTCTCTCGC+TGG 0.443734 1_4:-38218983 None:intergenic
GAAGAATGTAATAGCTCGTT+CGG 0.443759 1_4:+38223379 Msa0162050:three_prime_UTR
TCAGTTGACAAAGTTTCAAA+AGG 0.445552 1_4:+38221189 Msa0162050:CDS
GTGTATAAGCAATTACATTC+AGG 0.451351 1_4:-38223466 None:intergenic
TGGGACTCTTGGCGAAACTT+TGG 0.452256 1_4:+38219770 Msa0162050:CDS
TGCACTTGCACTGGAAGTAC+CGG 0.454136 1_4:+38221073 Msa0162050:CDS
CTTCTCTACGAAGGATTGCT+AGG 0.455152 1_4:+38218752 Msa0162050:CDS
ATTGTTAGGCTTAAGTTTGA+AGG 0.455427 1_4:+38217664 Msa0162050:CDS
CATTCATGTAAATTCATCAA+TGG 0.456014 1_4:+38216886 Msa0162050:exon
GAAGTTTCTATCAGCACCTT+CGG 0.458683 1_4:+38218435 Msa0162050:CDS
AATGAGAATTTAGAAGAAGA+AGG 0.460036 1_4:+38217286 Msa0162050:CDS
AGAGTGGAAATTAAAGGATT+GGG 0.461588 1_4:-38216850 None:intergenic
TTCTAACTTTCTAACAATGT+TGG 0.465397 1_4:-38219874 None:intergenic
AACTCTGATGTATTAATAGC+TGG 0.465778 1_4:-38219735 None:intergenic
AACTCTGTTTCCTTGTACAG+AGG 0.467317 1_4:+38218346 Msa0162050:CDS
TTGAAGAGAGGACGAGTTCG+CGG 0.469113 1_4:+38217479 Msa0162050:CDS
GTCTCATCATTGAAGGGCGC+TGG 0.469906 1_4:-38221245 None:intergenic
GCACTGGAAGTACCGGGAAC+TGG 0.473145 1_4:+38221080 Msa0162050:CDS
CATTCTTTCCCTCTCTAGCA+AGG 0.474225 1_4:-38219652 None:intergenic
AGCAAGGCTTGAGTGACATC+TGG 0.475279 1_4:-38219636 None:intergenic
ACTGGTCAAGATAATTGTTA+AGG 0.475719 1_4:+38221098 Msa0162050:CDS
AAGAAGCATAAGACGAGAAT+CGG 0.477508 1_4:+38217580 Msa0162050:CDS
AAGAAATTGTGGTGAAGAAA+CGG 0.481559 1_4:-38216970 None:intergenic
ACAGGCAGTGGCTCACATCC+AGG 0.483842 1_4:-38218631 None:intergenic
CCAGTACTAGTATCAAGCTT+TGG 0.486076 1_4:+38216758 Msa0162050:five_prime_UTR
CTGAAGGGAGGTTGGTAACC+AGG 0.489214 1_4:-38218682 None:intergenic
AAGAATGGCCAAAGCAATGC+AGG 0.492191 1_4:+38219668 Msa0162050:CDS
CAGAGTTGTCAGCGGAGGCT+GGG 0.492293 1_4:+38219751 Msa0162050:CDS
GCTAACTACCAGCGAGAGAA+TGG 0.492548 1_4:+38218975 Msa0162050:CDS
GAGAATGGCAGAAGAGATCA+AGG 0.492861 1_4:+38218990 Msa0162050:CDS
GGATGAGAGTCATGAGCAAA+AGG 0.493593 1_4:+38219821 Msa0162050:CDS
CCAAAGCTTGATACTAGTAC+TGG 0.493600 1_4:-38216758 None:intergenic
GGCCAAAGCAATGCAGGATG+AGG 0.501682 1_4:+38219674 Msa0162050:CDS
TACCGGATGCAGAAATTGAC+AGG 0.502091 1_4:+38219549 Msa0162050:intron
AGAGTTTCTGCACTGATACA+TGG 0.502378 1_4:+38217080 Msa0162050:CDS
CTGGTGGTCTGGTGATTTGG+AGG 0.504053 1_4:+38218317 Msa0162050:CDS
GGTAGAAACAGGCAGCTTCA+AGG 0.506557 1_4:+38218880 Msa0162050:intron
GAATCTCTTGACAAAGAGAA+AGG 0.507492 1_4:+38221272 Msa0162050:CDS
TATACTTGTTTACCGGGGAA+AGG 0.509017 1_4:+38221218 Msa0162050:CDS
CCATAACTTCCAATCCCAAA+TGG 0.510654 1_4:-38217397 None:intergenic
AAGTTAGGAGAAGTGTGAAA+TGG 0.513457 1_4:-38216935 None:intergenic
AGTTAGGAGAAGTGTGAAAT+GGG 0.517464 1_4:-38216934 None:intergenic
TGCAGCCATGATCAAATTGT+GGG 0.520807 1_4:+38218909 Msa0162050:CDS
TCGAGAACATGCACTTGCAC+TGG 0.523975 1_4:+38221064 Msa0162050:CDS
AAGTGTGAAATGGGTGAAGT+TGG 0.525049 1_4:-38216925 None:intergenic
AATTTGCCTCACAAAATTGA+AGG 0.526100 1_4:+38223268 Msa0162050:CDS
AAGACGAGAATCGGTGGTGG+TGG 0.526783 1_4:+38217589 Msa0162050:CDS
GTGAGGCAAATTCCTCAGGT+TGG 0.528149 1_4:-38223257 None:intergenic
TGACGATCCACATAGGCATC+GGG 0.529225 1_4:-38223315 None:intergenic
ATATTCTATACTTGTTTACC+GGG 0.530412 1_4:+38221212 Msa0162050:CDS
AGACACCTCCACCTTCGTTA+GGG 0.536033 1_4:-38220719 None:intergenic
CTGCAGCCATGATCAAATTG+TGG 0.537372 1_4:+38218908 Msa0162050:CDS
TCCACTACTGGTTTCTCCCA+AGG 0.538339 1_4:-38217448 None:intergenic
CTTGCTAGAGAGGGAAAGAA+TGG 0.538645 1_4:+38219653 Msa0162050:CDS
GGGATTGGAAGTTATGGAAG+TGG 0.539360 1_4:+38217403 Msa0162050:CDS
TTCAACTTTGCAAAGTAGAG+TGG 0.539632 1_4:+38222772 Msa0162050:CDS
CCTCACAAAATTGAAGGTCA+GGG 0.539886 1_4:+38223274 Msa0162050:exon
CTCTTCCTGAGTCTGAATTG+AGG 0.540388 1_4:+38217533 Msa0162050:CDS
GAAAGCATATCCGCATCGAC+AGG 0.540888 1_4:-38218649 None:intergenic
CCTAGATATACAGATTGGCC+TGG 0.541076 1_4:+38218613 Msa0162050:CDS
TGCTAAGTGGGGAAAGACAT+TGG 0.541926 1_4:+38219800 Msa0162050:CDS
AAACATAAATCTCTCTTCAT+CGG 0.542564 1_4:-38220782 None:intergenic
TTTGGATGCAGATGCTAAGT+GGG 0.543645 1_4:+38219788 Msa0162050:CDS
TTGACGATCCACATAGGCAT+CGG 0.547554 1_4:-38223316 None:intergenic
GTAGCTCACACCTCTGTACA+AGG 0.549963 1_4:-38218356 None:intergenic
GAGGATGCATGAGATATTGG+AGG 0.550479 1_4:+38217708 Msa0162050:CDS
TCACTCAAGCCTTGCTAGAG+AGG 0.551580 1_4:+38219643 Msa0162050:CDS
TTGATAAGATTCATGAGAGG+TGG 0.551714 1_4:+38217629 Msa0162050:CDS
AACCTCCTCAATTCAGACTC+AGG 0.552435 1_4:-38217538 None:intergenic
CTGATACATGGTTAAAACGC+TGG 0.556259 1_4:+38217092 Msa0162050:CDS
CTTTGGATGCAGATGCTAAG+TGG 0.556526 1_4:+38219787 Msa0162050:CDS
TTCTCTACGAAGGATTGCTA+GGG 0.556681 1_4:+38218753 Msa0162050:CDS
TCCGAAAGGAAGAACTCTGA+AGG 0.556767 1_4:-38218698 None:intergenic
GGAAGTTATGGAAGTGGTGA+TGG 0.559350 1_4:+38217409 Msa0162050:CDS
TGGTGAAGTGAGGTTTCCTT+GGG 0.559431 1_4:+38217432 Msa0162050:CDS
CTCTAGGATTGAATAAGTCA+AGG 0.562097 1_4:+38223537 Msa0162050:three_prime_UTR
GGCGCTGGTAATCCTTTCCC+CGG 0.562420 1_4:-38221230 None:intergenic
GAAGAACTCTGAAGGGAGGT+TGG 0.563635 1_4:-38218690 None:intergenic
TAGGTCCTAGATATACAGAT+TGG 0.563776 1_4:+38218608 Msa0162050:CDS
TTCGGAGTGAGACCGACACT+TGG 0.564308 1_4:+38218715 Msa0162050:CDS
ATAGAGAAAGCAAAGGAGGA+AGG 0.565375 1_4:+38222929 Msa0162050:CDS
ATCGCCCGAAACCGCCACGC+GGG 0.566037 1_4:+38217125 Msa0162050:CDS
ATGTTGCCTAATACAAGAGG+TGG 0.568407 1_4:+38217358 Msa0162050:CDS
GTGGATTCCCGATGCCTATG+TGG 0.570636 1_4:+38223308 Msa0162050:three_prime_UTR
GGTTGGTAACCAGGAACAGT+TGG 0.572106 1_4:-38218673 None:intergenic
TGGATGAAGAAGTTGAAGAG+AGG 0.576446 1_4:+38217467 Msa0162050:CDS
GAATCAGAAGTAAACTCAGA+AGG 0.579916 1_4:-38218475 None:intergenic
TCTAGGATTGAATAAGTCAA+GGG 0.580496 1_4:+38223538 Msa0162050:three_prime_UTR
CAAAGCAATGCAGGATGAGG+AGG 0.581413 1_4:+38219677 Msa0162050:CDS
GAAGTAGACAAGTTATTGGA+TGG 0.582788 1_4:+38218583 Msa0162050:CDS
CACTCAAGCCTTGCTAGAGA+GGG 0.584330 1_4:+38219644 Msa0162050:CDS
GTACAGAGGTGTGAGCTACA+AGG 0.584665 1_4:+38218360 Msa0162050:CDS
TCTTTGGTCTCATCATTGAA+GGG 0.584817 1_4:-38221251 None:intergenic
GACAAACCTAATGCAAAATG+TGG 0.585233 1_4:-38218784 None:intergenic
ACAAATAGAGAAAGCAAAGG+AGG 0.585579 1_4:+38222925 Msa0162050:CDS
TGTTTCGGAAATTAGGATTG+CGG 0.589994 1_4:+38220800 Msa0162050:CDS
TTCATGGTTGCAGGTAGACG+TGG 0.590174 1_4:+38221024 Msa0162050:intron
GACAAGTTATTGGATGGTCT+AGG 0.590262 1_4:+38218589 Msa0162050:CDS
ATGAATGAATGAATGAAGAG+TGG 0.591063 1_4:-38216866 None:intergenic
ATATCCGCATCGACAGGCAG+TGG 0.591204 1_4:-38218643 None:intergenic
GTGGTGATGGTGGTGAAGTG+AGG 0.598555 1_4:+38217422 Msa0162050:CDS
ACCAGGCTGAAAGAAAGATA+AGG 0.600022 1_4:+38220683 Msa0162050:intron
CCGAAAGGAAGAACTCTGAA+GGG 0.601959 1_4:-38218697 None:intergenic
TTCCTGAGTCTGAATTGAGG+AGG 0.601987 1_4:+38217536 Msa0162050:CDS
AAGAGCCCTAACGAAGGTGG+AGG 0.604594 1_4:+38220714 Msa0162050:CDS
GGATGATGAGGAAGAAGTTG+AGG 0.605917 1_4:+38223173 Msa0162050:CDS
ATTGAGTATGAACTTATCAG+TGG 0.606193 1_4:-38223408 None:intergenic
TATTATTTATTTCCAACCTG+AGG 0.607464 1_4:+38223245 Msa0162050:CDS
GATTGAAGAAGAAGAAATTG+TGG 0.608022 1_4:-38216981 None:intergenic
GCCTCCTTGAAACCAAGTGT+CGG 0.611476 1_4:-38218727 None:intergenic
TCGCCCGAAACCGCCACGCG+GGG 0.612576 1_4:+38217126 Msa0162050:CDS
TAATTTAAAACCCCGCGTGG+CGG 0.613765 1_4:-38217136 None:intergenic
TGAGAGAAGTAGAACAACTA+CGG 0.614641 1_4:+38219847 Msa0162050:CDS
TATGTAGGCGGAGGATGATG+AGG 0.615791 1_4:+38223161 Msa0162050:intron
AATGGGTGAAGTTGGCGAGT+GGG 0.618212 1_4:-38216917 None:intergenic
AGTTATGGAAGTGGTGATGG+TGG 0.618975 1_4:+38217412 Msa0162050:CDS
CTGCTATTGACGATCCACAT+AGG 0.620633 1_4:-38223322 None:intergenic
GGAACAAATAGAGAAAGCAA+AGG 0.621173 1_4:+38222922 Msa0162050:intron
GCACTTGCACTGGAAGTACC+GGG 0.621505 1_4:+38221074 Msa0162050:CDS
AAACCTAATGCAAAATGTGG+AGG 0.626002 1_4:-38218781 None:intergenic
AGGAGGCAACTTCTCTACGA+AGG 0.627538 1_4:+38218743 Msa0162050:CDS
AACCTAATGCAAAATGTGGA+GGG 0.630249 1_4:-38218780 None:intergenic
TCCACTTCAAAATCATCCGA+AGG 0.632694 1_4:-38218451 None:intergenic
ATGCTGCACTTAACATGAAG+AGG 0.634551 1_4:+38217689 Msa0162050:CDS
TCCTTGGGAGAAACCAGTAG+TGG 0.634853 1_4:+38217447 Msa0162050:CDS
TACATCAGAGTTGTCAGCGG+AGG 0.635595 1_4:+38219746 Msa0162050:CDS
GGAATGTTGCCTAATACAAG+AGG 0.637246 1_4:+38217355 Msa0162050:CDS
TGAAAGAGCCCTAACGAAGG+TGG 0.638631 1_4:+38220711 Msa0162050:CDS
AGTGTCGGTCTCACTCCGAA+AGG 0.639614 1_4:-38218712 None:intergenic
AAGCATAAGACGAGAATCGG+TGG 0.644894 1_4:+38217583 Msa0162050:CDS
AAATGGGTGAAGTTGGCGAG+TGG 0.645078 1_4:-38216918 None:intergenic
AATCGAGCTTCAACGACATG+AGG 0.650049 1_4:+38221308 Msa0162050:CDS
TGTTGCCTAATACAAGAGGT+GGG 0.652697 1_4:+38217359 Msa0162050:CDS
GAAGAGTAAGACTTCTATGG+CGG 0.662513 1_4:+38217504 Msa0162050:CDS
CTAGCACTTGAAGCTGAGAG+TGG 0.663111 1_4:+38221153 Msa0162050:CDS
CTCACAAAATTGAAGGTCAG+GGG 0.663537 1_4:+38223275 Msa0162050:exon
CATAAGACGAGAATCGGTGG+TGG 0.666864 1_4:+38217586 Msa0162050:CDS
GCACTTGAAGCTGAGAGTGG+TGG 0.667962 1_4:+38221156 Msa0162050:CDS
CTAGGATTGAATAAGTCAAG+GGG 0.670029 1_4:+38223539 Msa0162050:three_prime_UTR
GGTCTGTTAACATATGCTTG+AGG 0.672068 1_4:+38223560 Msa0162050:three_prime_UTR
AGCTGAAAGAGCCCTAACGA+AGG 0.684719 1_4:+38220708 Msa0162050:CDS
GCTAAAGTTGCACTAAAACG+TGG 0.687479 1_4:+38218946 Msa0162050:CDS
CGGATGCAGAAATTGACAGG+TGG 0.689412 1_4:+38219552 Msa0162050:intron
TACAGATGATGATAACTCTG+AGG 0.690871 1_4:+38222991 Msa0162050:CDS
AATCGCCCGAAACCGCCACG+CGG 0.692343 1_4:+38217124 Msa0162050:CDS
TGATAATTTAAAACCCCGCG+TGG 0.693389 1_4:-38217139 None:intergenic
AAAGGAAGAACTCTGAAGGG+AGG 0.696481 1_4:-38218694 None:intergenic
TTGGATGCAGATGCTAAGTG+GGG 0.702741 1_4:+38219789 Msa0162050:CDS
TGAGCCACTGCCTGTCGATG+CGG 0.707365 1_4:+38218639 Msa0162050:CDS
TATTCTATACTTGTTTACCG+GGG 0.713369 1_4:+38221213 Msa0162050:CDS
TAATACATCAGAGTTGTCAG+CGG 0.714007 1_4:+38219743 Msa0162050:CDS
TCTCTACGAAGGATTGCTAG+GGG 0.724320 1_4:+38218754 Msa0162050:CDS
ACCGACACTTGGTTTCAAGG+AGG 0.731383 1_4:+38218726 Msa0162050:CDS
TTGTTGATAAGATTCATGAG+AGG 0.747036 1_4:+38217626 Msa0162050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAATTGTGAAATAT+AGG + chr1_4:38218859-38218878 Msa0162050:intron 10.0%
!!! AGAATTATTTTTTTTTAATG+GGG - chr1_4:38220162-38220181 None:intergenic 10.0%
!!! ATTTTTAAAAGATAAATACA+AGG - chr1_4:38220418-38220437 None:intergenic 10.0%
!!! AATATGTTTTTGTTTTATTA+CGG + chr1_4:38220467-38220486 Msa0162050:intron 10.0%
!!! ATATACAATATTTAAAATCA+GGG - chr1_4:38220539-38220558 None:intergenic 10.0%
!!! TATATACAATATTTAAAATC+AGG - chr1_4:38220540-38220559 None:intergenic 10.0%
!! TAATCATGTAAATTATAAAT+TGG - chr1_4:38220642-38220661 None:intergenic 10.0%
!! TATACAGTATTTATATTAAT+TGG - chr1_4:38221419-38221438 None:intergenic 10.0%
!! ACAAAATTTATTAGTTAAAC+CGG - chr1_4:38219033-38219052 None:intergenic 15.0%
!!! ATGAATATTGTTTTTATTAC+CGG + chr1_4:38219532-38219551 Msa0162050:intron 15.0%
!!! ATATGTTTTTGTTTTATTAC+GGG + chr1_4:38220468-38220487 Msa0162050:intron 15.0%
!! ATTAAAATGAATGTAATTCA+TGG + chr1_4:38221008-38221027 Msa0162050:intron 15.0%
!!! ATGTATGTATATACATTTTT+TGG + chr1_4:38223507-38223526 Msa0162050:three_prime_UTR 15.0%
!!! AGATAAGTGAAATTTTTTGT+GGG - chr1_4:38217031-38217050 None:intergenic 20.0%
!!! AAGATAAGTGAAATTTTTTG+TGG - chr1_4:38217032-38217051 None:intergenic 20.0%
!! AAACTCTTATGGTAAAAAAT+GGG - chr1_4:38217067-38217086 None:intergenic 20.0%
!! TTGAGAAATTGAAGAAATTT+GGG + chr1_4:38217248-38217267 Msa0162050:CDS 20.0%
!!! GATATATTTTATGTAGAAGA+AGG + chr1_4:38217334-38217353 Msa0162050:CDS 20.0%
!! AACAGAATAAACAGTTATAT+AGG + chr1_4:38218395-38218414 Msa0162050:CDS 20.0%
!! CAAAATTTATTAGTTAAACC+GGG - chr1_4:38219032-38219051 None:intergenic 20.0%
!! AAAATTTATGCTTTAGTGAA+TGG - chr1_4:38219120-38219139 None:intergenic 20.0%
!! ACTTATAGTGAGAAATTAAT+GGG + chr1_4:38219266-38219285 Msa0162050:intron 20.0%
!! ACAGCTATAACAAAAAATTT+AGG - chr1_4:38219964-38219983 None:intergenic 20.0%
!!! AAATTTTTTGTTATAGCTGT+TGG + chr1_4:38219964-38219983 Msa0162050:intron 20.0%
!!! AATTTTTTGTTATAGCTGTT+GGG + chr1_4:38219965-38219984 Msa0162050:intron 20.0%
!!! TTTAAAATGATGAATGTCTA+GGG - chr1_4:38220034-38220053 None:intergenic 20.0%
!!! GGCTATAATTTTTTTTTTTG+AGG - chr1_4:38220118-38220137 None:intergenic 20.0%
!!! TATTCATTATCATCATCTTT+TGG + chr1_4:38220589-38220608 Msa0162050:intron 20.0%
!!! TTTTACAATTAGCATTTGAT+TGG - chr1_4:38221356-38221375 None:intergenic 20.0%
!! TATTCAGAATAAATAGGAAA+GGG - chr1_4:38221637-38221656 None:intergenic 20.0%
!! GTATTGTATTCAGAATAAAT+AGG - chr1_4:38221643-38221662 None:intergenic 20.0%
!! ATACATCAAGTTTATCAATT+TGG + chr1_4:38221843-38221862 Msa0162050:intron 20.0%
!! CAGAAAAAAAATGAAAGATT+GGG - chr1_4:38221881-38221900 None:intergenic 20.0%
!! GTTTAGTGTTTATAAAGATT+GGG - chr1_4:38222409-38222428 None:intergenic 20.0%
!! AGTTTAGTGTTTATAAAGAT+TGG - chr1_4:38222410-38222429 None:intergenic 20.0%
!! TAAATGATATATTCAGTAGA+AGG + chr1_4:38222604-38222623 Msa0162050:intron 20.0%
!! ATTGTATAACAGATTAGATT+CGG + chr1_4:38222961-38222980 Msa0162050:CDS 20.0%
!! TATTTACACGCAAATATAAA+AGG - chr1_4:38223128-38223147 None:intergenic 20.0%
!! TATCTTATACTTGTATATGT+AGG + chr1_4:38223146-38223165 Msa0162050:intron 20.0%
!! TAATTGCTTATACACTATTA+AGG + chr1_4:38223474-38223493 Msa0162050:three_prime_UTR 20.0%
!!! TTTTCTATAAGCTAATATGA+AGG - chr1_4:38223593-38223612 None:intergenic 20.0%
! CATTCATGTAAATTCATCAA+TGG + chr1_4:38216886-38216905 Msa0162050:exon 25.0%
!!! TTTTGAAAGTGAAGCTTTTA+TGG - chr1_4:38217006-38217025 None:intergenic 25.0%
! GAAACTCTTATGGTAAAAAA+TGG - chr1_4:38217068-38217087 None:intergenic 25.0%
!!! GTTTTAAATTATCAAGGTTC+TGG + chr1_4:38217148-38217167 Msa0162050:CDS 25.0%
! GTTGAGAAATTGAAGAAATT+TGG + chr1_4:38217247-38217266 Msa0162050:CDS 25.0%
! AATGAGAATTTAGAAGAAGA+AGG + chr1_4:38217286-38217305 Msa0162050:CDS 25.0%
! TTGAATATACAAGAAGCAAA+AGG - chr1_4:38217746-38217765 None:intergenic 25.0%
! TTGAAAAATCTGTGCAATTT+AGG + chr1_4:38217787-38217806 Msa0162050:intron 25.0%
! TGAAAAATCTGTGCAATTTA+GGG + chr1_4:38217788-38217807 Msa0162050:intron 25.0%
! AGGTATAAATGCATACAATT+CGG - chr1_4:38217840-38217859 None:intergenic 25.0%
! ATCACAGAAATTAAGAAAGT+TGG + chr1_4:38217891-38217910 Msa0162050:intron 25.0%
! ATAAACAAACTCTATCTTGA+AGG - chr1_4:38217965-38217984 None:intergenic 25.0%
!! ATATTTTGTAGACATTTCAC+TGG + chr1_4:38218203-38218222 Msa0162050:intron 25.0%
! TACTACATTCAGAAAAAAAC+TGG + chr1_4:38218298-38218317 Msa0162050:intron 25.0%
! TGTTTATTCTGTTGTATTGA+AGG - chr1_4:38218388-38218407 None:intergenic 25.0%
! AAAAACATCGTTGGAAAAAT+TGG + chr1_4:38218504-38218523 Msa0162050:CDS 25.0%
!! TTTTTGCATTATTCGTTTGT+AGG + chr1_4:38219165-38219184 Msa0162050:intron 25.0%
! CACTTATAGTGAGAAATTAA+TGG + chr1_4:38219265-38219284 Msa0162050:intron 25.0%
! AACACAAACAAAATAAGATC+AGG + chr1_4:38219461-38219480 Msa0162050:intron 25.0%
! TTCTAACTTTCTAACAATGT+TGG - chr1_4:38219877-38219896 None:intergenic 25.0%
!! GTTTAAAATGATGAATGTCT+AGG - chr1_4:38220035-38220054 None:intergenic 25.0%
!! AGACATTCATCATTTTAAAC+AGG + chr1_4:38220035-38220054 Msa0162050:intron 25.0%
!! GACATTCATCATTTTAAACA+GGG + chr1_4:38220036-38220055 Msa0162050:intron 25.0%
! TTGTATATACACAATGTTAG+TGG + chr1_4:38220551-38220570 Msa0162050:intron 25.0%
! AATAATCCTAGAGTGAAATT+AGG - chr1_4:38220617-38220636 None:intergenic 25.0%
! AAACATAAATCTCTCTTCAT+CGG - chr1_4:38220785-38220804 None:intergenic 25.0%
! ATGAAGAGAGATTTATGTTT+CGG + chr1_4:38220785-38220804 Msa0162050:CDS 25.0%
! AGATTTATGTTTCGGAAATT+AGG + chr1_4:38220793-38220812 Msa0162050:CDS 25.0%
!! ATTCATGATAATGATATGTG+AGG + chr1_4:38220970-38220989 Msa0162050:intron 25.0%
!! TTCATGATAATGATATGTGA+GGG + chr1_4:38220971-38220990 Msa0162050:intron 25.0%
! GATATTCTATACTTGTTTAC+CGG + chr1_4:38221211-38221230 Msa0162050:CDS 25.0%
! ATATTCTATACTTGTTTACC+GGG + chr1_4:38221212-38221231 Msa0162050:CDS 25.0%
! ATTTACAAACTTACACAGAA+AGG + chr1_4:38221499-38221518 Msa0162050:intron 25.0%
! GTATTCAGAATAAATAGGAA+AGG - chr1_4:38221638-38221657 None:intergenic 25.0%
! CCAGAAAAAAAATGAAAGAT+TGG - chr1_4:38221882-38221901 None:intergenic 25.0%
!!! CCAATCTTTCATTTTTTTTC+TGG + chr1_4:38221879-38221898 Msa0162050:intron 25.0%
!!! TGGCTTAACAACATTTTTTT+TGG + chr1_4:38221899-38221918 Msa0162050:intron 25.0%
!!! AAGTTTTAACTCTTAGAGTT+TGG + chr1_4:38222028-38222047 Msa0162050:intron 25.0%
!!! AGTTTTAACTCTTAGAGTTT+GGG + chr1_4:38222029-38222048 Msa0162050:intron 25.0%
! GTGTAGTGTTTATAAAGATT+GGG - chr1_4:38222102-38222121 None:intergenic 25.0%
! TGTGTAGTGTTTATAAAGAT+TGG - chr1_4:38222103-38222122 None:intergenic 25.0%
! AATTGCCTAGATATATCATA+TGG - chr1_4:38222128-38222147 None:intergenic 25.0%
! ATCAATAGTACGTACTATTT+CGG - chr1_4:38222810-38222829 None:intergenic 25.0%
! CATATAATATACAGCTTAGA+TGG - chr1_4:38222856-38222875 None:intergenic 25.0%
! CATCTAAGCTGTATATTATA+TGG + chr1_4:38222854-38222873 Msa0162050:intron 25.0%
! TGTATATTATATGGAAACCT+AGG + chr1_4:38222863-38222882 Msa0162050:intron 25.0%
! TATTATTTATTTCCAACCTG+AGG + chr1_4:38223245-38223264 Msa0162050:CDS 25.0%
!!! ATTTTTTGGTTAAGTTCTCT+AGG + chr1_4:38223521-38223540 Msa0162050:three_prime_UTR 25.0%
GAAATTGAAGATGAAGATTC+TGG - chr1_4:38216816-38216835 None:intergenic 30.0%
AGAGTGGAAATTAAAGGATT+GGG - chr1_4:38216853-38216872 None:intergenic 30.0%
AAGAGTGGAAATTAAAGGAT+TGG - chr1_4:38216854-38216873 None:intergenic 30.0%
GAATGAAGAGTGGAAATTAA+AGG - chr1_4:38216859-38216878 None:intergenic 30.0%
ATGAATGAATGAATGAAGAG+TGG - chr1_4:38216869-38216888 None:intergenic 30.0%
AAGAAATTGTGGTGAAGAAA+CGG - chr1_4:38216973-38216992 None:intergenic 30.0%
GATTGAAGAAGAAGAAATTG+TGG - chr1_4:38216984-38217003 None:intergenic 30.0%
!! AATTATCAAGGTTCTGGAAA+TGG + chr1_4:38217154-38217173 Msa0162050:CDS 30.0%
!! ATTATCAAGGTTCTGGAAAT+GGG + chr1_4:38217155-38217174 Msa0162050:CDS 30.0%
AAGAAGGAGTGATAGAAAAA+GGG + chr1_4:38217302-38217321 Msa0162050:CDS 30.0%
! TTGTTGATAAGATTCATGAG+AGG + chr1_4:38217626-38217645 Msa0162050:CDS 30.0%
ATTGTTAGGCTTAAGTTTGA+AGG + chr1_4:38217664-38217683 Msa0162050:CDS 30.0%
GAAAAATCTGTGCAATTTAG+GGG + chr1_4:38217789-38217808 Msa0162050:intron 30.0%
GGTATAAATGCATACAATTC+GGG - chr1_4:38217839-38217858 None:intergenic 30.0%
CGTTCTATATTTAAACACTG+AGG - chr1_4:38217860-38217879 None:intergenic 30.0%
TCCATCGTAGTATTTATTGT+TGG + chr1_4:38217988-38218007 Msa0162050:intron 30.0%
ACCAACAATAAATACTACGA+TGG - chr1_4:38217992-38218011 None:intergenic 30.0%
!! GTAGTATTTATTGTTGGTTC+AGG + chr1_4:38217994-38218013 Msa0162050:intron 30.0%
TGCAGTTGAAAATTCAGATT+AGG + chr1_4:38218042-38218061 Msa0162050:intron 30.0%
! TCAAGAGGGTCTTATATTTA+GGG + chr1_4:38218090-38218109 Msa0162050:intron 30.0%
CATAGAAGATTGCACAATTA+CGG - chr1_4:38218170-38218189 None:intergenic 30.0%
AATTGTGCAATCTTCTATGA+TGG + chr1_4:38218171-38218190 Msa0162050:intron 30.0%
! AAGACAGTTATTGATAGTCA+AGG - chr1_4:38218262-38218281 None:intergenic 30.0%
TACATTCAGAAAAAAACTGG+TGG + chr1_4:38218301-38218320 Msa0162050:intron 30.0%
!! TCATCTTCATAACTGACTTT+TGG - chr1_4:38218565-38218584 None:intergenic 30.0%
AGATGAAGTAGACAAGTTAT+TGG + chr1_4:38218579-38218598 Msa0162050:CDS 30.0%
TGTGAAATATAGGTAGAAAC+AGG + chr1_4:38218869-38218888 Msa0162050:intron 30.0%
! TTTTTCCCACAATTTGATCA+TGG - chr1_4:38218917-38218936 None:intergenic 30.0%
! TGTGTACATTTTCAAACAGA+AGG - chr1_4:38219143-38219162 None:intergenic 30.0%
CATACTTAATGTCCACTTAA+TGG - chr1_4:38219194-38219213 None:intergenic 30.0%
ATGTGAGTTTGTAATTCGTA+AGG + chr1_4:38219235-38219254 Msa0162050:intron 30.0%
TGTGAGTTTGTAATTCGTAA+GGG + chr1_4:38219236-38219255 Msa0162050:intron 30.0%
AGATGTAAGTATCACGTTAT+AGG + chr1_4:38219431-38219450 Msa0162050:intron 30.0%
ATCTACAAATCATCACATAG+TGG - chr1_4:38219514-38219533 None:intergenic 30.0%
AACTCTGATGTATTAATAGC+TGG - chr1_4:38219738-38219757 None:intergenic 30.0%
AGGAAAAGGAAATCAAATCA+GGG - chr1_4:38220252-38220271 None:intergenic 30.0%
AAAGATGACTCGATTCTAAT+AGG - chr1_4:38220296-38220315 None:intergenic 30.0%
! TTTGAGGTTCTTCATGTATA+CGG + chr1_4:38220352-38220371 Msa0162050:intron 30.0%
ATTTACATGATTATGATCCC+TGG + chr1_4:38220649-38220668 Msa0162050:intron 30.0%
ATGAAAGCTTTCTTACTTCT+TGG + chr1_4:38220823-38220842 Msa0162050:CDS 30.0%
ACTGGTCAAGATAATTGTTA+AGG + chr1_4:38221098-38221117 Msa0162050:CDS 30.0%
TCAGTTGACAAAGTTTCAAA+AGG + chr1_4:38221189-38221208 Msa0162050:CDS 30.0%
TATTCTATACTTGTTTACCG+GGG + chr1_4:38221213-38221232 Msa0162050:CDS 30.0%
TCTATCAGAAAGCAACAAAT+TGG - chr1_4:38221388-38221407 None:intergenic 30.0%
!! TTGTTGCTTTCTGATAGAAA+CGG + chr1_4:38221390-38221409 Msa0162050:intron 30.0%
GTTAGATATCTAATTGAGAG+TGG - chr1_4:38221823-38221842 None:intergenic 30.0%
! AATGAAAGATTGGGAAGTAT+CGG - chr1_4:38221872-38221891 None:intergenic 30.0%
!!! TTTTTTGGCTTAGTTTGTTG+TGG + chr1_4:38221914-38221933 Msa0162050:intron 30.0%
CTAATTCAACCTTAGAAAAC+CGG + chr1_4:38222058-38222077 Msa0162050:intron 30.0%
ACACACCATATGATATATCT+AGG + chr1_4:38222120-38222139 Msa0162050:intron 30.0%
TAGGACAGATTCTTAGAATT+TGG + chr1_4:38222337-38222356 Msa0162050:intron 30.0%
AGGACAGATTCTTAGAATTT+GGG + chr1_4:38222338-38222357 Msa0162050:intron 30.0%
TATATCTTGTTAGTCCTTGT+TGG - chr1_4:38222571-38222590 None:intergenic 30.0%
AAGGACTAACAAGATATAGT+GGG + chr1_4:38222573-38222592 Msa0162050:intron 30.0%
ACATATGCACATTTACAAGA+TGG - chr1_4:38222660-38222679 None:intergenic 30.0%
TTTGTCAATAAAATGAGGCA+AGG - chr1_4:38222732-38222751 None:intergenic 30.0%
AAACAAAGATTAGGAAACCT+AGG - chr1_4:38222883-38222902 None:intergenic 30.0%
! TTTCCTAATCTTTGTTTGTC+TGG + chr1_4:38222886-38222905 Msa0162050:intron 30.0%
CTTATACTTGTATATGTAGG+CGG + chr1_4:38223149-38223168 Msa0162050:intron 30.0%
AATTTGCCTCACAAAATTGA+AGG + chr1_4:38223268-38223287 Msa0162050:CDS 30.0%
ATTGAGTATGAACTTATCAG+TGG - chr1_4:38223411-38223430 None:intergenic 30.0%
GTGTATAAGCAATTACATTC+AGG - chr1_4:38223469-38223488 None:intergenic 30.0%
! TCTAGGATTGAATAAGTCAA+GGG + chr1_4:38223538-38223557 Msa0162050:three_prime_UTR 30.0%
TTAACATATGCTTGAGGAAT+AGG + chr1_4:38223566-38223585 Msa0162050:three_prime_UTR 30.0%
! ACTAGTACTGGATAGAAAAC+TGG - chr1_4:38216749-38216768 None:intergenic 35.0%
!!! TCTTACTCTGTTCTGGTTTT+TGG - chr1_4:38216789-38216808 None:intergenic 35.0%
! AGTTAGGAGAAGTGTGAAAT+GGG - chr1_4:38216937-38216956 None:intergenic 35.0%
! AAGTTAGGAGAAGTGTGAAA+TGG - chr1_4:38216938-38216957 None:intergenic 35.0%
TATCAGTGCAGAAACTCTTA+TGG - chr1_4:38217078-38217097 None:intergenic 35.0%
!! AGCTCTGATGATGAAGATTT+TGG + chr1_4:38217202-38217221 Msa0162050:CDS 35.0%
!! TCTGATGATGAAGATTTTGG+TGG + chr1_4:38217205-38217224 Msa0162050:CDS 35.0%
!! AGATTTTGGTGGTAGTAGAA+TGG + chr1_4:38217216-38217235 Msa0162050:CDS 35.0%
GAAGAAGGAGTGATAGAAAA+AGG + chr1_4:38217301-38217320 Msa0162050:CDS 35.0%
GAAGAAGAGTAAGACTTCTA+TGG + chr1_4:38217501-38217520 Msa0162050:CDS 35.0%
! AAGAAGCATAAGACGAGAAT+CGG + chr1_4:38217580-38217599 Msa0162050:CDS 35.0%
TTGATAAGATTCATGAGAGG+TGG + chr1_4:38217629-38217648 Msa0162050:CDS 35.0%
TAAATGCATACAATTCGGGT+TGG - chr1_4:38217835-38217854 None:intergenic 35.0%
! CTCAAGAGGGTCTTATATTT+AGG + chr1_4:38218089-38218108 Msa0162050:intron 35.0%
! GGTCTTATATTTAGGGATGA+AGG + chr1_4:38218097-38218116 Msa0162050:intron 35.0%
ACAATTACGGATCACTACAT+TGG - chr1_4:38218157-38218176 None:intergenic 35.0%
! CAGTTATTGATAGTCAAGGA+TGG - chr1_4:38218258-38218277 None:intergenic 35.0%
GAATCAGAAGTAAACTCAGA+AGG - chr1_4:38218478-38218497 None:intergenic 35.0%
!! TTCTGAGACAAAAACATCGT+TGG + chr1_4:38218495-38218514 Msa0162050:CDS 35.0%
GAAGTAGACAAGTTATTGGA+TGG + chr1_4:38218583-38218602 Msa0162050:CDS 35.0%
TAGGTCCTAGATATACAGAT+TGG + chr1_4:38218608-38218627 Msa0162050:CDS 35.0%
AACCTAATGCAAAATGTGGA+GGG - chr1_4:38218783-38218802 None:intergenic 35.0%
AAACCTAATGCAAAATGTGG+AGG - chr1_4:38218784-38218803 None:intergenic 35.0%
GACAAACCTAATGCAAAATG+TGG - chr1_4:38218787-38218806 None:intergenic 35.0%
AAGTGGACATTAAGTATGAG+AGG + chr1_4:38219196-38219215 Msa0162050:intron 35.0%
CTACATAAAGCTAACTGCAA+AGG - chr1_4:38219389-38219408 None:intergenic 35.0%
!! CTTTGCAGTTAGCTTTATGT+AGG + chr1_4:38219387-38219406 Msa0162050:intron 35.0%
CTCCAGAAATAAAGACTTCT+TGG + chr1_4:38219584-38219603 Msa0162050:CDS 35.0%
! GACCAAGAAGTCTTTATTTC+TGG - chr1_4:38219589-38219608 None:intergenic 35.0%
!! ACTTCTTGGTCTTTTATCGA+GGG + chr1_4:38219598-38219617 Msa0162050:CDS 35.0%
TAATACATCAGAGTTGTCAG+CGG + chr1_4:38219743-38219762 Msa0162050:CDS 35.0%
TGAGAGAAGTAGAACAACTA+CGG + chr1_4:38219847-38219866 Msa0162050:CDS 35.0%
!! TTTAGGCTTGTTGATGATGT+GGG - chr1_4:38219947-38219966 None:intergenic 35.0%
!! ATTTAGGCTTGTTGATGATG+TGG - chr1_4:38219948-38219967 None:intergenic 35.0%
! TTCATCATTTTAAACAGGGC+CGG + chr1_4:38220040-38220059 Msa0162050:intron 35.0%
TCGTACTTAGTAGTACTACT+GGG - chr1_4:38220139-38220158 None:intergenic 35.0%
TCAAATCAGGGAAGAAGAAA+AGG - chr1_4:38220240-38220259 None:intergenic 35.0%
GAGGAAAAGGAAATCAAATC+AGG - chr1_4:38220253-38220272 None:intergenic 35.0%
CTAAAACAAGACAACAGAAG+AGG - chr1_4:38220272-38220291 None:intergenic 35.0%
!!! CTCTTCTGTTGTCTTGTTTT+AGG + chr1_4:38220270-38220289 Msa0162050:intron 35.0%
! GAATCGAGTCATCTTTCTTT+TGG + chr1_4:38220300-38220319 Msa0162050:intron 35.0%
!!! GTCATCTTTCTTTTGGTGTT+AGG + chr1_4:38220307-38220326 Msa0162050:intron 35.0%
!!! ATCTTTCTTTTGGTGTTAGG+CGG + chr1_4:38220310-38220329 Msa0162050:intron 35.0%
! ACGGTAATGATTTTCACCTT+TGG + chr1_4:38220371-38220390 Msa0162050:intron 35.0%
! CGGTAATGATTTTCACCTTT+GGG + chr1_4:38220372-38220391 Msa0162050:intron 35.0%
! CTTCATCGGTTATACTTTCA+GGG - chr1_4:38220771-38220790 None:intergenic 35.0%
! TCTTCATCGGTTATACTTTC+AGG - chr1_4:38220772-38220791 None:intergenic 35.0%
TGTTTCGGAAATTAGGATTG+CGG + chr1_4:38220800-38220819 Msa0162050:CDS 35.0%
AGTGGTTAAGTGAATCAAAG+TGG - chr1_4:38220892-38220911 None:intergenic 35.0%
! TTCACTTAACCACTTGCTAA+AGG + chr1_4:38220898-38220917 Msa0162050:intron 35.0%
!! TATGTGAGGGTATTTAGTTG+TGG + chr1_4:38220984-38221003 Msa0162050:intron 35.0%
TGAATGTAATTCATGGTTGC+AGG + chr1_4:38221015-38221034 Msa0162050:intron 35.0%
TCTTTGGTCTCATCATTGAA+GGG - chr1_4:38221254-38221273 None:intergenic 35.0%
TTCTTTGGTCTCATCATTGA+AGG - chr1_4:38221255-38221274 None:intergenic 35.0%
CTCTTTGTCAAGAGATTCTT+TGG - chr1_4:38221270-38221289 None:intergenic 35.0%
GAATCTCTTGACAAAGAGAA+AGG + chr1_4:38221272-38221291 Msa0162050:CDS 35.0%
!! TGTTGCTTTCTGATAGAAAC+GGG + chr1_4:38221391-38221410 Msa0162050:intron 35.0%
TATCAAGTGGTTAATTGGGT+GGG - chr1_4:38221600-38221619 None:intergenic 35.0%
TTATCAAGTGGTTAATTGGG+TGG - chr1_4:38221601-38221620 None:intergenic 35.0%
GGGTTATCAAGTGGTTAATT+GGG - chr1_4:38221604-38221623 None:intergenic 35.0%
TGGGTTATCAAGTGGTTAAT+TGG - chr1_4:38221605-38221624 None:intergenic 35.0%
CAGAATAAATAGGAAAGGGA+AGG - chr1_4:38221633-38221652 None:intergenic 35.0%
GAAACAGTCAAAAGTGACAT+TGG - chr1_4:38221755-38221774 None:intergenic 35.0%
TGATAAAGGAACAAAACAGG+AGG - chr1_4:38221785-38221804 None:intergenic 35.0%
CTCTGATAAAGGAACAAAAC+AGG - chr1_4:38221788-38221807 None:intergenic 35.0%
! ATGTGTTACAGCTCTGATAA+AGG - chr1_4:38221799-38221818 None:intergenic 35.0%
!! ATGAAAGATTGGGAAGTATC+GGG - chr1_4:38221871-38221890 None:intergenic 35.0%
!!! CGGTTTTCTAAGGTTGAATT+AGG - chr1_4:38222060-38222079 None:intergenic 35.0%
TTCATTGTGTTGGGTGTAAA+GGG - chr1_4:38222166-38222185 None:intergenic 35.0%
CTAACTCAACCTTATGAAAC+CGG + chr1_4:38222367-38222386 Msa0162050:intron 35.0%
ACTAAACTTGCCATATCTCT+AGG + chr1_4:38222422-38222441 Msa0162050:intron 35.0%
CAAGGACTAACAAGATATAG+TGG + chr1_4:38222572-38222591 Msa0162050:intron 35.0%
! GCCTCATTTTATTGACAAAC+AGG + chr1_4:38222733-38222752 Msa0162050:intron 35.0%
GCCTGTTTGTCAATAAAATG+AGG - chr1_4:38222737-38222756 None:intergenic 35.0%
TTCAACTTTGCAAAGTAGAG+TGG + chr1_4:38222772-38222791 Msa0162050:CDS 35.0%
GTTCCAGACAAACAAAGATT+AGG - chr1_4:38222892-38222911 None:intergenic 35.0%
!! TTGTCTGGAACATTTTTCAC+AGG + chr1_4:38222901-38222920 Msa0162050:intron 35.0%
GGAACAAATAGAGAAAGCAA+AGG + chr1_4:38222922-38222941 Msa0162050:intron 35.0%
ACAAATAGAGAAAGCAAAGG+AGG + chr1_4:38222925-38222944 Msa0162050:CDS 35.0%
TACAGATGATGATAACTCTG+AGG + chr1_4:38222991-38223010 Msa0162050:CDS 35.0%
AGCAGTGACACTTAATTCAT+TGG + chr1_4:38223340-38223359 Msa0162050:three_prime_UTR 35.0%
GAAGAATGTAATAGCTCGTT+CGG + chr1_4:38223379-38223398 Msa0162050:three_prime_UTR 35.0%
GAGATCATAGAGTATGCAAT+TGG + chr1_4:38223436-38223455 Msa0162050:intron 35.0%
!! CTCTAGGATTGAATAAGTCA+AGG + chr1_4:38223537-38223556 Msa0162050:three_prime_UTR 35.0%
CTAGGATTGAATAAGTCAAG+GGG + chr1_4:38223539-38223558 Msa0162050:three_prime_UTR 35.0%
CCAAAGCTTGATACTAGTAC+TGG - chr1_4:38216761-38216780 None:intergenic 40.0%
CCAGTACTAGTATCAAGCTT+TGG + chr1_4:38216758-38216777 Msa0162050:five_prime_UTR 40.0%
TGGTTGTTCTTACTCTGTTC+TGG - chr1_4:38216796-38216815 None:intergenic 40.0%
AAGTGTGAAATGGGTGAAGT+TGG - chr1_4:38216928-38216947 None:intergenic 40.0%
CGGAGAGAATGATGAAAGTT+AGG - chr1_4:38216953-38216972 None:intergenic 40.0%
! AGAGTTTCTGCACTGATACA+TGG + chr1_4:38217080-38217099 Msa0162050:CDS 40.0%
CTGATACATGGTTAAAACGC+TGG + chr1_4:38217092-38217111 Msa0162050:CDS 40.0%
! TGATAATTTAAAACCCCGCG+TGG - chr1_4:38217142-38217161 None:intergenic 40.0%
!!! CGCGGGGTTTTAAATTATCA+AGG + chr1_4:38217142-38217161 Msa0162050:CDS 40.0%
GATAGAAAAAGGGTCAGTAG+AGG + chr1_4:38217312-38217331 Msa0162050:CDS 40.0%
GGAATGTTGCCTAATACAAG+AGG + chr1_4:38217355-38217374 Msa0162050:CDS 40.0%
ATGTTGCCTAATACAAGAGG+TGG + chr1_4:38217358-38217377 Msa0162050:CDS 40.0%
TGTTGCCTAATACAAGAGGT+GGG + chr1_4:38217359-38217378 Msa0162050:CDS 40.0%
GAAAACCCACCTCTTGTATT+AGG - chr1_4:38217367-38217386 None:intergenic 40.0%
CCATAACTTCCAATCCCAAA+TGG - chr1_4:38217400-38217419 None:intergenic 40.0%
! CCATTTGGGATTGGAAGTTA+TGG + chr1_4:38217397-38217416 Msa0162050:CDS 40.0%
TCAACTTCTTCATCCACTAC+TGG - chr1_4:38217463-38217482 None:intergenic 40.0%
TGGATGAAGAAGTTGAAGAG+AGG + chr1_4:38217467-38217486 Msa0162050:CDS 40.0%
GAAGAGTAAGACTTCTATGG+CGG + chr1_4:38217504-38217523 Msa0162050:CDS 40.0%
!! GGAAGACTTCTGAGATTGTT+AGG + chr1_4:38217650-38217669 Msa0162050:CDS 40.0%
ATGCTGCACTTAACATGAAG+AGG + chr1_4:38217689-38217708 Msa0162050:CDS 40.0%
GAAGAGGATGCATGAGATAT+TGG + chr1_4:38217705-38217724 Msa0162050:CDS 40.0%
TGCATGAGATATTGGAGGTT+TGG + chr1_4:38217713-38217732 Msa0162050:intron 40.0%
AGAGACAGACATTTCTCAAG+AGG + chr1_4:38218075-38218094 Msa0162050:intron 40.0%
GAGACAGACATTTCTCAAGA+GGG + chr1_4:38218076-38218095 Msa0162050:intron 40.0%
TACGGATCACTACATTGGAT+TGG - chr1_4:38218152-38218171 None:intergenic 40.0%
! TATTGATAGTCAAGGATGGC+AGG - chr1_4:38218254-38218273 None:intergenic 40.0%
TCAGAAAAAAACTGGTGGTC+TGG + chr1_4:38218306-38218325 Msa0162050:intron 40.0%
AACTCTGTTTCCTTGTACAG+AGG + chr1_4:38218346-38218365 Msa0162050:CDS 40.0%
GAAGTTTCTATCAGCACCTT+CGG + chr1_4:38218435-38218454 Msa0162050:CDS 40.0%
!! ACCTTCGGATGATTTTGAAG+TGG + chr1_4:38218450-38218469 Msa0162050:CDS 40.0%
TCCACTTCAAAATCATCCGA+AGG - chr1_4:38218454-38218473 None:intergenic 40.0%
GACAAGTTATTGGATGGTCT+AGG + chr1_4:38218589-38218608 Msa0162050:CDS 40.0%
TTCTCTACGAAGGATTGCTA+GGG + chr1_4:38218753-38218772 Msa0162050:CDS 40.0%
TGCAGCCATGATCAAATTGT+GGG + chr1_4:38218909-38218928 Msa0162050:CDS 40.0%
GCTAAAGTTGCACTAAAACG+TGG + chr1_4:38218946-38218965 Msa0162050:CDS 40.0%
CTTCACTGTTCATGTATCCT+TGG + chr1_4:38219090-38219109 Msa0162050:intron 40.0%
CTTTAGTGAATGGCATACCA+AGG - chr1_4:38219110-38219129 None:intergenic 40.0%
TACAAACTCACATAGCGTAC+TGG - chr1_4:38219228-38219247 None:intergenic 40.0%
GTTTGTAATTCGTAAGGGCT+AGG + chr1_4:38219241-38219260 Msa0162050:intron 40.0%
!! GCAGTTAGCTTTATGTAGGA+TGG + chr1_4:38219391-38219410 Msa0162050:intron 40.0%
!! GACTTCTTGGTCTTTTATCG+AGG + chr1_4:38219597-38219616 Msa0162050:CDS 40.0%
TTTGGATGCAGATGCTAAGT+GGG + chr1_4:38219788-38219807 Msa0162050:CDS 40.0%
!!! TTTTTTGAGGCCCATACCTT+GGG - chr1_4:38220105-38220124 None:intergenic 40.0%
!!! TTTTTTTGAGGCCCATACCT+TGG - chr1_4:38220106-38220125 None:intergenic 40.0%
GTCGTACTTAGTAGTACTAC+TGG - chr1_4:38220140-38220159 None:intergenic 40.0%
AGAAGAAAAGGAAAGTCCGA+TGG - chr1_4:38220228-38220247 None:intergenic 40.0%
CAAGACAACAGAAGAGGAAA+AGG - chr1_4:38220266-38220285 None:intergenic 40.0%
!!! TCTTTCTTTTGGTGTTAGGC+GGG + chr1_4:38220311-38220330 Msa0162050:intron 40.0%
TATATACGCGATACACCCAA+AGG - chr1_4:38220390-38220409 None:intergenic 40.0%
TTGGGTGTATCGCGTATATA+CGG + chr1_4:38220390-38220409 Msa0162050:intron 40.0%
CACAATGTTAGTGGTACTTG+AGG + chr1_4:38220560-38220579 Msa0162050:intron 40.0%
! TTGGTGCCTAATTTCACTCT+AGG + chr1_4:38220608-38220627 Msa0162050:intron 40.0%
ACCAGGCTGAAAGAAAGATA+AGG + chr1_4:38220683-38220702 Msa0162050:intron 40.0%
TCCTTATCTTTCTTTCAGCC+TGG - chr1_4:38220687-38220706 None:intergenic 40.0%
! ACTTAACCACTTGCTAAAGG+TGG + chr1_4:38220901-38220920 Msa0162050:intron 40.0%
! CTTAACCACTTGCTAAAGGT+GGG + chr1_4:38220902-38220921 Msa0162050:intron 40.0%
CAATTATCTTGACCAGTTCC+CGG - chr1_4:38221095-38221114 None:intergenic 40.0%
TATACTTGTTTACCGGGGAA+AGG + chr1_4:38221218-38221237 Msa0162050:CDS 40.0%
CTTGACAAAGAGAAAGGCTT+TGG + chr1_4:38221278-38221297 Msa0162050:CDS 40.0%
CAGAAAGCAACAAATTGGAG+TGG - chr1_4:38221383-38221402 None:intergenic 40.0%
! GACTTTTATCGAGTGATCTC+TGG + chr1_4:38221445-38221464 Msa0162050:intron 40.0%
AACTAGGAATTGCAAGGTCA+CGG + chr1_4:38221543-38221562 Msa0162050:intron 40.0%
! GACATTGGTTAGTTACTGCA+GGG - chr1_4:38221740-38221759 None:intergenic 40.0%
! TGACATTGGTTAGTTACTGC+AGG - chr1_4:38221741-38221760 None:intergenic 40.0%
AAAGGAACAAAACAGGAGGA+GGG - chr1_4:38221781-38221800 None:intergenic 40.0%
TAAAGGAACAAAACAGGAGG+AGG - chr1_4:38221782-38221801 None:intergenic 40.0%
!! TGAAAGATTGGGAAGTATCG+GGG - chr1_4:38221870-38221889 None:intergenic 40.0%
!! TTTGGCTTAGTTTGTTGTGG+TGG + chr1_4:38221917-38221936 Msa0162050:intron 40.0%
!! TTGGCTTAGTTTGTTGTGGT+GGG + chr1_4:38221918-38221937 Msa0162050:intron 40.0%
TCATTGTGTTGGGTGTAAAG+GGG - chr1_4:38222165-38222184 None:intergenic 40.0%
CTTCATTGTGTTGGGTGTAA+AGG - chr1_4:38222167-38222186 None:intergenic 40.0%
CTTTACACCCAACACAATGA+AGG + chr1_4:38222165-38222184 Msa0162050:intron 40.0%
TCCAACACCTTCATTGTGTT+GGG - chr1_4:38222175-38222194 None:intergenic 40.0%
! TTCGTTGCTTTGGGTTTAAG+GGG - chr1_4:38222467-38222486 None:intergenic 40.0%
! CTTCGTTGCTTTGGGTTTAA+GGG - chr1_4:38222468-38222487 None:intergenic 40.0%
GAAACCCAAATGCCACAATT+AGG + chr1_4:38222509-38222528 Msa0162050:intron 40.0%
TGAAAGCGGAATTTCCAACA+AGG + chr1_4:38222554-38222573 Msa0162050:intron 40.0%
ATAGAGAAAGCAAAGGAGGA+AGG + chr1_4:38222929-38222948 Msa0162050:CDS 40.0%
ATACTTGTATATGTAGGCGG+AGG + chr1_4:38223152-38223171 Msa0162050:intron 40.0%
! TTTTGTGAGGCAAATTCCTC+AGG - chr1_4:38223264-38223283 None:intergenic 40.0%
CCTCACAAAATTGAAGGTCA+GGG + chr1_4:38223274-38223293 Msa0162050:exon 40.0%
CTCACAAAATTGAAGGTCAG+GGG + chr1_4:38223275-38223294 Msa0162050:exon 40.0%
GGTCTGTTAACATATGCTTG+AGG + chr1_4:38223560-38223579 Msa0162050:three_prime_UTR 40.0%
! TAATTTAAAACCCCGCGTGG+CGG - chr1_4:38217139-38217158 None:intergenic 45.0%
! TTTTCGCCGGAATCACCATT+TGG + chr1_4:38217382-38217401 Msa0162050:CDS 45.0%
TTTCGCCGGAATCACCATTT+GGG + chr1_4:38217383-38217402 Msa0162050:CDS 45.0%
CCAATCCCAAATGGTGATTC+CGG - chr1_4:38217391-38217410 None:intergenic 45.0%
GGGATTGGAAGTTATGGAAG+TGG + chr1_4:38217403-38217422 Msa0162050:CDS 45.0%
GGAAGTTATGGAAGTGGTGA+TGG + chr1_4:38217409-38217428 Msa0162050:CDS 45.0%
!! AGTTATGGAAGTGGTGATGG+TGG + chr1_4:38217412-38217431 Msa0162050:CDS 45.0%
TGGTGAAGTGAGGTTTCCTT+GGG + chr1_4:38217432-38217451 Msa0162050:CDS 45.0%
CTCTTCCTGAGTCTGAATTG+AGG + chr1_4:38217533-38217552 Msa0162050:CDS 45.0%
TTCCTGAGTCTGAATTGAGG+AGG + chr1_4:38217536-38217555 Msa0162050:CDS 45.0%
AACCTCCTCAATTCAGACTC+AGG - chr1_4:38217541-38217560 None:intergenic 45.0%
AAGCATAAGACGAGAATCGG+TGG + chr1_4:38217583-38217602 Msa0162050:CDS 45.0%
GAGGATGCATGAGATATTGG+AGG + chr1_4:38217708-38217727 Msa0162050:CDS 45.0%
GGTTCAGGCGTATGTTTGTA+AGG + chr1_4:38218009-38218028 Msa0162050:intron 45.0%
AAACTGGTGGTCTGGTGATT+TGG + chr1_4:38218314-38218333 Msa0162050:CDS 45.0%
CCAGGCCAATCTGTATATCT+AGG - chr1_4:38218616-38218635 None:intergenic 45.0%
! CCTAGATATACAGATTGGCC+TGG + chr1_4:38218613-38218632 Msa0162050:CDS 45.0%
ATGCTTTCTCCAACTGTTCC+TGG + chr1_4:38218664-38218683 Msa0162050:CDS 45.0%
! AAAGGAAGAACTCTGAAGGG+AGG - chr1_4:38218697-38218716 None:intergenic 45.0%
CCGAAAGGAAGAACTCTGAA+GGG - chr1_4:38218700-38218719 None:intergenic 45.0%
CCCTTCAGAGTTCTTCCTTT+CGG + chr1_4:38218697-38218716 Msa0162050:CDS 45.0%
TCCGAAAGGAAGAACTCTGA+AGG - chr1_4:38218701-38218720 None:intergenic 45.0%
CTTCTCTACGAAGGATTGCT+AGG + chr1_4:38218752-38218771 Msa0162050:CDS 45.0%
TCTCTACGAAGGATTGCTAG+GGG + chr1_4:38218754-38218773 Msa0162050:CDS 45.0%
! CTCCCTCCACATTTTGCATT+AGG + chr1_4:38218778-38218797 Msa0162050:CDS 45.0%
CTGCAGCCATGATCAAATTG+TGG + chr1_4:38218908-38218927 Msa0162050:CDS 45.0%
GAGAATGGCAGAAGAGATCA+AGG + chr1_4:38218990-38219009 Msa0162050:CDS 45.0%
GGTGATTTATCACGTTCTCC+CGG + chr1_4:38219011-38219030 Msa0162050:intron 45.0%
GTTTGTAGGCAGCCATTAAG+TGG + chr1_4:38219179-38219198 Msa0162050:intron 45.0%
TACCGGATGCAGAAATTGAC+AGG + chr1_4:38219549-38219568 Msa0162050:intron 45.0%
CACCTGTCAATTTCTGCATC+CGG - chr1_4:38219554-38219573 None:intergenic 45.0%
CATTCTTTCCCTCTCTAGCA+AGG - chr1_4:38219655-38219674 None:intergenic 45.0%
CTTGCTAGAGAGGGAAAGAA+TGG + chr1_4:38219653-38219672 Msa0162050:CDS 45.0%
AAGAATGGCCAAAGCAATGC+AGG + chr1_4:38219668-38219687 Msa0162050:CDS 45.0%
CTTTGGATGCAGATGCTAAG+TGG + chr1_4:38219787-38219806 Msa0162050:CDS 45.0%
TTGGATGCAGATGCTAAGTG+GGG + chr1_4:38219789-38219808 Msa0162050:CDS 45.0%
TGCTAAGTGGGGAAAGACAT+TGG + chr1_4:38219800-38219819 Msa0162050:CDS 45.0%
GGATGAGAGTCATGAGCAAA+AGG + chr1_4:38219821-38219840 Msa0162050:CDS 45.0%
!!! TTTTTGAGGCCCATACCTTG+GGG - chr1_4:38220104-38220123 None:intergenic 45.0%
TTCCATCACCATCACTCCAT+CGG + chr1_4:38220209-38220228 Msa0162050:intron 45.0%
!!! GTGTTAGGCGGGTGTTTTTT+GGG + chr1_4:38220322-38220341 Msa0162050:intron 45.0%
!!! TTTTTTGGGAGGGTGGTTTG+AGG + chr1_4:38220336-38220355 Msa0162050:intron 45.0%
CCTGGTCAGCAAAAAATCCA+GGG - chr1_4:38220669-38220688 None:intergenic 45.0%
TTCATCCCACCTTTAGCAAG+TGG - chr1_4:38220910-38220929 None:intergenic 45.0%
! GGTAGACGTGGAGTTTTTGA+CGG + chr1_4:38221036-38221055 Msa0162050:intron 45.0%
AATCGAGCTTCAACGACATG+AGG + chr1_4:38221308-38221327 Msa0162050:CDS 45.0%
TGCAGGAACTAGGAATTGCA+AGG + chr1_4:38221537-38221556 Msa0162050:intron 45.0%
! CTACCAAGTCTTTGAGAGCT+TGG + chr1_4:38221568-38221587 Msa0162050:intron 45.0%
GAACCAAGCTCTCAAAGACT+TGG - chr1_4:38221574-38221593 None:intergenic 45.0%
AAGGAACAAAACAGGAGGAG+GGG - chr1_4:38221780-38221799 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTCTA+AGG - chr1_4:38222070-38222089 None:intergenic 45.0%
!! CCTTAGAAAACCGGCTTGTA+AGG + chr1_4:38222067-38222086 Msa0162050:intron 45.0%
!! AAAACCGGCTTGTAAGGTGA+GGG + chr1_4:38222073-38222092 Msa0162050:intron 45.0%
! ACCCAACACAATGAAGGTGT+TGG + chr1_4:38222171-38222190 Msa0162050:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG - chr1_4:38222176-38222195 None:intergenic 45.0%
! GGTGTTGGAGATTGCAATGA+TGG + chr1_4:38222186-38222205 Msa0162050:intron 45.0%
CAGCCCAAATGCCACAATTA+GGG + chr1_4:38222209-38222228 Msa0162050:intron 45.0%
AGCCCAAATGCCACAATTAG+GGG + chr1_4:38222210-38222229 Msa0162050:intron 45.0%
ATTGGGTCTCAAGTGTGAGA+GGG - chr1_4:38222275-38222294 None:intergenic 45.0%
AAGAATCTGTCCTACGTCTG+TGG - chr1_4:38222331-38222350 None:intergenic 45.0%
! CCTTACAAGCCGGTTTCATA+AGG - chr1_4:38222379-38222398 None:intergenic 45.0%
!! CCTTATGAAACCGGCTTGTA+AGG + chr1_4:38222376-38222395 Msa0162050:intron 45.0%
!! TATGAAACCGGCTTGTAAGG+TGG + chr1_4:38222379-38222398 Msa0162050:intron 45.0%
!! ATGAAACCGGCTTGTAAGGT+GGG + chr1_4:38222380-38222399 Msa0162050:intron 45.0%
TGCCATATCTCTAGGCAACA+TGG + chr1_4:38222430-38222449 Msa0162050:intron 45.0%
GCCATATCTCTAGGCAACAT+GGG + chr1_4:38222431-38222450 Msa0162050:intron 45.0%
TCCCATGTTGCCTAGAGATA+TGG - chr1_4:38222435-38222454 None:intergenic 45.0%
! CCTTCGTTGCTTTGGGTTTA+AGG - chr1_4:38222469-38222488 None:intergenic 45.0%
CCTTAAACCCAAAGCAACGA+AGG + chr1_4:38222466-38222485 Msa0162050:intron 45.0%
! TCCAACACCTTCGTTGCTTT+GGG - chr1_4:38222476-38222495 None:intergenic 45.0%
! GGTGTTGGAGGTTACAATGA+AGG + chr1_4:38222487-38222506 Msa0162050:intron 45.0%
GGTGCCTAATTGTGGCATTT+GGG - chr1_4:38222516-38222535 None:intergenic 45.0%
AGGTGCCTAATTGTGGCATT+TGG - chr1_4:38222517-38222536 None:intergenic 45.0%
AATGCCACAATTAGGCACCT+AGG + chr1_4:38222517-38222536 Msa0162050:intron 45.0%
ATGCCACAATTAGGCACCTA+GGG + chr1_4:38222518-38222537 Msa0162050:intron 45.0%
GGATGATGAGGAAGAAGTTG+AGG + chr1_4:38223173-38223192 Msa0162050:CDS 45.0%
GCCTCACAAAATTGAAGGTC+AGG + chr1_4:38223273-38223292 Msa0162050:exon 45.0%
! CCCTGACCTTCAATTTTGTG+AGG - chr1_4:38223277-38223296 None:intergenic 45.0%
TTGACGATCCACATAGGCAT+CGG - chr1_4:38223319-38223338 None:intergenic 45.0%
CTGCTATTGACGATCCACAT+AGG - chr1_4:38223325-38223344 None:intergenic 45.0%
!!! AAGAATTATTTTTTTTTAAT+GGG - chr1_4:38220163-38220182 None:intergenic 5.0%
!!! TAAGAATTATTTTTTTTTAA+TGG - chr1_4:38220164-38220183 None:intergenic 5.0%
AATGGGTGAAGTTGGCGAGT+GGG - chr1_4:38216920-38216939 None:intergenic 50.0%
AAATGGGTGAAGTTGGCGAG+TGG - chr1_4:38216921-38216940 None:intergenic 50.0%
!! TACAAGAGGTGGGTTTTCGC+CGG + chr1_4:38217369-38217388 Msa0162050:CDS 50.0%
! CCGGAATCACCATTTGGGAT+TGG + chr1_4:38217388-38217407 Msa0162050:CDS 50.0%
GTGGTGAAGTGAGGTTTCCT+TGG + chr1_4:38217431-38217450 Msa0162050:CDS 50.0%
TCCTTGGGAGAAACCAGTAG+TGG + chr1_4:38217447-38217466 Msa0162050:CDS 50.0%
!! TCCACTACTGGTTTCTCCCA+AGG - chr1_4:38217451-38217470 None:intergenic 50.0%
TTGAAGAGAGGACGAGTTCG+CGG + chr1_4:38217479-38217498 Msa0162050:CDS 50.0%
CATAAGACGAGAATCGGTGG+TGG + chr1_4:38217586-38217605 Msa0162050:CDS 50.0%
GTAGCTCACACCTCTGTACA+AGG - chr1_4:38218359-38218378 None:intergenic 50.0%
! GTACAGAGGTGTGAGCTACA+AGG + chr1_4:38218360-38218379 Msa0162050:CDS 50.0%
! GAAAGCATATCCGCATCGAC+AGG - chr1_4:38218652-38218671 None:intergenic 50.0%
!! GGTTGGTAACCAGGAACAGT+TGG - chr1_4:38218676-38218695 None:intergenic 50.0%
! GAAGAACTCTGAAGGGAGGT+TGG - chr1_4:38218693-38218712 None:intergenic 50.0%
GAGACCGACACTTGGTTTCA+AGG + chr1_4:38218723-38218742 Msa0162050:CDS 50.0%
ACCGACACTTGGTTTCAAGG+AGG + chr1_4:38218726-38218745 Msa0162050:CDS 50.0%
GCCTCCTTGAAACCAAGTGT+CGG - chr1_4:38218730-38218749 None:intergenic 50.0%
AGGAGGCAACTTCTCTACGA+AGG + chr1_4:38218743-38218762 Msa0162050:CDS 50.0%
GGTAGAAACAGGCAGCTTCA+AGG + chr1_4:38218880-38218899 Msa0162050:intron 50.0%
GCTAACTACCAGCGAGAGAA+TGG + chr1_4:38218975-38218994 Msa0162050:CDS 50.0%
CGGATGCAGAAATTGACAGG+TGG + chr1_4:38219552-38219571 Msa0162050:intron 50.0%
AGCAAGGCTTGAGTGACATC+TGG - chr1_4:38219639-38219658 None:intergenic 50.0%
TCACTCAAGCCTTGCTAGAG+AGG + chr1_4:38219643-38219662 Msa0162050:CDS 50.0%
CACTCAAGCCTTGCTAGAGA+GGG + chr1_4:38219644-38219663 Msa0162050:CDS 50.0%
CTCCTCATCCTGCATTGCTT+TGG - chr1_4:38219679-38219698 None:intergenic 50.0%
CAAAGCAATGCAGGATGAGG+AGG + chr1_4:38219677-38219696 Msa0162050:CDS 50.0%
TACATCAGAGTTGTCAGCGG+AGG + chr1_4:38219746-38219765 Msa0162050:CDS 50.0%
TGGGACTCTTGGCGAAACTT+TGG + chr1_4:38219770-38219789 Msa0162050:CDS 50.0%
! TTTTAAACAGGGCCGGACCT+TGG + chr1_4:38220047-38220066 Msa0162050:intron 50.0%
TTTAAACAGGGCCGGACCTT+GGG + chr1_4:38220048-38220067 Msa0162050:intron 50.0%
TGCAAGGAGCTCAATGGAAC+CGG + chr1_4:38220074-38220093 Msa0162050:intron 50.0%
AGGAAAGTCCGATGGAGTGA+TGG - chr1_4:38220220-38220239 None:intergenic 50.0%
!!! GGTGTTAGGCGGGTGTTTTT+TGG + chr1_4:38220321-38220340 Msa0162050:intron 50.0%
!!! TTAGGCGGGTGTTTTTTGGG+AGG + chr1_4:38220325-38220344 Msa0162050:intron 50.0%
!!! TAGGCGGGTGTTTTTTGGGA+GGG + chr1_4:38220326-38220345 Msa0162050:intron 50.0%
TTCCTACGAATTCGGAGGGT+CGG - chr1_4:38220513-38220532 None:intergenic 50.0%
ACCCTCCGAATTCGTAGGAA+CGG + chr1_4:38220513-38220532 Msa0162050:intron 50.0%
!!! CCCTGGATTTTTTGCTGACC+AGG + chr1_4:38220666-38220685 Msa0162050:intron 50.0%
GCCTGGTCAGCAAAAAATCC+AGG - chr1_4:38220670-38220689 None:intergenic 50.0%
AGCTGAAAGAGCCCTAACGA+AGG + chr1_4:38220708-38220727 Msa0162050:CDS 50.0%
TGAAAGAGCCCTAACGAAGG+TGG + chr1_4:38220711-38220730 Msa0162050:CDS 50.0%
! GGGTCTGCTCTGTTTTCTGA+TGG - chr1_4:38220751-38220770 None:intergenic 50.0%
TTCATGGTTGCAGGTAGACG+TGG + chr1_4:38221024-38221043 Msa0162050:intron 50.0%
TCGAGAACATGCACTTGCAC+TGG + chr1_4:38221064-38221083 Msa0162050:CDS 50.0%
! TGCACTTGCACTGGAAGTAC+CGG + chr1_4:38221073-38221092 Msa0162050:CDS 50.0%
CTAGCACTTGAAGCTGAGAG+TGG + chr1_4:38221153-38221172 Msa0162050:CDS 50.0%
!! AGGCAGAGTGGGTTATCAAG+TGG - chr1_4:38221613-38221632 None:intergenic 50.0%
TAGGAAAGGGAAGGCAGAGT+GGG - chr1_4:38221624-38221643 None:intergenic 50.0%
ATAGGAAAGGGAAGGCAGAG+TGG - chr1_4:38221625-38221644 None:intergenic 50.0%
!! GAAAACCGGCTTGTAAGGTG+AGG + chr1_4:38222072-38222091 Msa0162050:intron 50.0%
! TGGGTGTAAAGGGGTGGATT+TGG - chr1_4:38222156-38222175 None:intergenic 50.0%
TTGTGTTGGGTGTAAAGGGG+TGG - chr1_4:38222162-38222181 None:intergenic 50.0%
GCAGCCCAAATGCCACAATT+AGG + chr1_4:38222208-38222227 Msa0162050:intron 50.0%
GCCCAAATGCCACAATTAGG+GGG + chr1_4:38222211-38222230 Msa0162050:intron 50.0%
GCCCCCTAATTGTGGCATTT+GGG - chr1_4:38222215-38222234 None:intergenic 50.0%
AGCCCCCTAATTGTGGCATT+TGG - chr1_4:38222216-38222235 None:intergenic 50.0%
ATGCCACAATTAGGGGGCTA+CGG + chr1_4:38222217-38222236 Msa0162050:intron 50.0%
TTGGGTCTCAAGTGTGAGAG+GGG - chr1_4:38222274-38222293 None:intergenic 50.0%
CATTGGGTCTCAAGTGTGAG+AGG - chr1_4:38222276-38222295 None:intergenic 50.0%
GTCCATGTGTCAGGCTCATT+GGG - chr1_4:38222292-38222311 None:intergenic 50.0%
TCTGTCCTACGTCTGTGGTT+CGG - chr1_4:38222326-38222345 None:intergenic 50.0%
! GTTGCTTTGGGTTTAAGGGG+TGG - chr1_4:38222464-38222483 None:intergenic 50.0%
! ACCCAAAGCAACGAAGGTGT+TGG + chr1_4:38222472-38222491 Msa0162050:intron 50.0%
CTCCAACACCTTCGTTGCTT+TGG - chr1_4:38222477-38222496 None:intergenic 50.0%
!! CAAAGCAACGAAGGTGTTGG+AGG + chr1_4:38222475-38222494 Msa0162050:intron 50.0%
TGCCACAATTAGGCACCTAG+GGG + chr1_4:38222519-38222538 Msa0162050:intron 50.0%
TATGTAGGCGGAGGATGATG+AGG + chr1_4:38223161-38223180 Msa0162050:intron 50.0%
GTGAGGCAAATTCCTCAGGT+TGG - chr1_4:38223260-38223279 None:intergenic 50.0%
TGACGATCCACATAGGCATC+GGG - chr1_4:38223318-38223337 None:intergenic 50.0%
!! GTGGTGATGGTGGTGAAGTG+AGG + chr1_4:38217422-38217441 Msa0162050:CDS 55.0%
! AAGACGAGAATCGGTGGTGG+TGG + chr1_4:38217589-38217608 Msa0162050:CDS 55.0%
! CTGGTGGTCTGGTGATTTGG+AGG + chr1_4:38218317-38218336 Msa0162050:CDS 55.0%
! GGTCTGGTGATTTGGAGGTC+TGG + chr1_4:38218322-38218341 Msa0162050:CDS 55.0%
! ATATCCGCATCGACAGGCAG+TGG - chr1_4:38218646-38218665 None:intergenic 55.0%
!! CTGAAGGGAGGTTGGTAACC+AGG - chr1_4:38218685-38218704 None:intergenic 55.0%
!! AGTGTCGGTCTCACTCCGAA+AGG - chr1_4:38218715-38218734 None:intergenic 55.0%
TTCGGAGTGAGACCGACACT+TGG + chr1_4:38218715-38218734 Msa0162050:CDS 55.0%
CTCTTCTGCCATTCTCTCGC+TGG - chr1_4:38218986-38219005 None:intergenic 55.0%
GGCCAAAGCAATGCAGGATG+AGG + chr1_4:38219674-38219693 Msa0162050:CDS 55.0%
TTAAACAGGGCCGGACCTTG+GGG + chr1_4:38220049-38220068 Msa0162050:intron 55.0%
GCAAGGAGCTCAATGGAACC+GGG + chr1_4:38220075-38220094 Msa0162050:intron 55.0%
!! AGTGATGGTGATGGAACGCG+TGG - chr1_4:38220205-38220224 None:intergenic 55.0%
! GTCCGATGGAGTGATGGTGA+TGG - chr1_4:38220214-38220233 None:intergenic 55.0%
AACCGACCCTCCGAATTCGT+AGG + chr1_4:38220508-38220527 Msa0162050:intron 55.0%
GCCGTTCCTACGAATTCGGA+GGG - chr1_4:38220517-38220536 None:intergenic 55.0%
CAGGGCCGTTCCTACGAATT+CGG - chr1_4:38220521-38220540 None:intergenic 55.0%
AAGAGCCCTAACGAAGGTGG+AGG + chr1_4:38220714-38220733 Msa0162050:CDS 55.0%
!! GCACTTGCACTGGAAGTACC+GGG + chr1_4:38221074-38221093 Msa0162050:CDS 55.0%
GCACTTGAAGCTGAGAGTGG+TGG + chr1_4:38221156-38221175 Msa0162050:CDS 55.0%
! AGCTGAGAGTGGTGGTGTTC+TGG + chr1_4:38221164-38221183 Msa0162050:CDS 55.0%
! GTCTCATCATTGAAGGGCGC+TGG - chr1_4:38221248-38221267 None:intergenic 55.0%
GGAACATTGTGCAGCAGTGC+AGG + chr1_4:38221520-38221539 Msa0162050:intron 55.0%
TGTGCAGCAGTGCAGGAACT+AGG + chr1_4:38221527-38221546 Msa0162050:intron 55.0%
! TCAAGTGTGAGAGGGGGTGT+TGG - chr1_4:38222267-38222286 None:intergenic 55.0%
TGGGTCTCAAGTGTGAGAGG+GGG - chr1_4:38222273-38222292 None:intergenic 55.0%
GACCCAATGAGCCTGACACA+TGG + chr1_4:38222287-38222306 Msa0162050:intron 55.0%
CGTCCATGTGTCAGGCTCAT+TGG - chr1_4:38222293-38222312 None:intergenic 55.0%
GCCACAATTAGGCACCTAGG+GGG + chr1_4:38222520-38222539 Msa0162050:intron 55.0%
CCACAATTAGGCACCTAGGG+GGG + chr1_4:38222521-38222540 Msa0162050:intron 55.0%
!! GGGGTGGACTGCAATGAAAG+CGG + chr1_4:38222540-38222559 Msa0162050:intron 55.0%
! GGTCAGGGGTCGTGATTTTG+TGG + chr1_4:38223289-38223308 Msa0162050:three_prime_UTR 55.0%
GTGGATTCCCGATGCCTATG+TGG + chr1_4:38223308-38223327 Msa0162050:three_prime_UTR 55.0%
AAAACCCCGCGTGGCGGTTT+CGG - chr1_4:38217133-38217152 None:intergenic 60.0%
ACAGGCAGTGGCTCACATCC+AGG - chr1_4:38218634-38218653 None:intergenic 60.0%
TGAGCCACTGCCTGTCGATG+CGG + chr1_4:38218639-38218658 Msa0162050:CDS 60.0%
TCAGAGTTGTCAGCGGAGGC+TGG + chr1_4:38219750-38219769 Msa0162050:CDS 60.0%
CAGAGTTGTCAGCGGAGGCT+GGG + chr1_4:38219751-38219770 Msa0162050:CDS 60.0%
TCCTTGCACACCCCAAGGTC+CGG - chr1_4:38220062-38220081 None:intergenic 60.0%
TGAGCTCCTTGCACACCCCA+AGG - chr1_4:38220067-38220086 None:intergenic 60.0%
GGGGTGTGCAAGGAGCTCAA+TGG + chr1_4:38220068-38220087 Msa0162050:intron 60.0%
TTGAGGCCCATACCTTGGGG+AGG - chr1_4:38220101-38220120 None:intergenic 60.0%
!!! GCGGGTGTTTTTTGGGAGGG+TGG + chr1_4:38220329-38220348 Msa0162050:intron 60.0%
GGCCGTTCCTACGAATTCGG+AGG - chr1_4:38220518-38220537 None:intergenic 60.0%
!! GCACTGGAAGTACCGGGAAC+TGG + chr1_4:38221080-38221099 Msa0162050:CDS 60.0%
!! GGCGCTGGTAATCCTTTCCC+CGG - chr1_4:38221233-38221252 None:intergenic 60.0%
GCAGCCCTCACCTTACAAGC+CGG - chr1_4:38222080-38222099 None:intergenic 60.0%
CCTCCGTAGCCCCCTAATTG+TGG - chr1_4:38222223-38222242 None:intergenic 60.0%
CCACAATTAGGGGGCTACGG+AGG + chr1_4:38222220-38222239 Msa0162050:intron 60.0%
AGCCTGACACATGGACGACG+CGG + chr1_4:38222296-38222315 Msa0162050:intron 60.0%
GCAAGCCGAACCACAGACGT+AGG + chr1_4:38222318-38222337 Msa0162050:intron 60.0%
CCCCCCTAGGTGCCTAATTG+TGG - chr1_4:38222524-38222543 None:intergenic 60.0%
CAATTAGGCACCTAGGGGGG+TGG + chr1_4:38222524-38222543 Msa0162050:intron 60.0%
TCATTGCAGTCCACCCCCCT+AGG - chr1_4:38222537-38222556 None:intergenic 60.0%
AATCGCCCGAAACCGCCACG+CGG + chr1_4:38217124-38217143 Msa0162050:CDS 65.0%
AAACCCCGCGTGGCGGTTTC+GGG - chr1_4:38217132-38217151 None:intergenic 65.0%
TCAGCGGAGGCTGGGACTCT+TGG + chr1_4:38219759-38219778 Msa0162050:CDS 65.0%
AATGGAACCGGGCCTCCCCA+AGG + chr1_4:38220086-38220105 Msa0162050:intron 65.0%
AACCGGGCCTCCCCAAGGTA+TGG + chr1_4:38220091-38220110 Msa0162050:intron 65.0%
ACCGGGCCTCCCCAAGGTAT+GGG + chr1_4:38220092-38220111 Msa0162050:intron 65.0%
TGCCGCGTCGTCCATGTGTC+AGG - chr1_4:38222301-38222320 None:intergenic 65.0%
GGGCAGCCCACCTTACAAGC+CGG - chr1_4:38222389-38222408 None:intergenic 65.0%
ATCGCCCGAAACCGCCACGC+GGG + chr1_4:38217125-38217144 Msa0162050:CDS 70.0%
GCCGGACCTTGGGGTGTGCA+AGG + chr1_4:38220058-38220077 Msa0162050:intron 70.0%
GCCCATACCTTGGGGAGGCC+CGG - chr1_4:38220096-38220115 None:intergenic 70.0%
TCGCCCGAAACCGCCACGCG+GGG + chr1_4:38217126-38217145 Msa0162050:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 38216739 38223675 38216739 ID=Msa0162050;Name=Msa0162050
chr1_4 mRNA 38216739 38223675 38216739 ID=Msa0162050-mRNA-1;Parent=Msa0162050;Name=Msa0162050-mRNA-1;_AED=0.07;_eAED=0.07;_QI=166|1|1|1|0.88|0.8|10|368|838
chr1_4 exon 38216739 38217729 38216739 ID=Msa0162050-mRNA-1:exon:11190;Parent=Msa0162050-mRNA-1
chr1_4 exon 38218310 38218799 38218310 ID=Msa0162050-mRNA-1:exon:11191;Parent=Msa0162050-mRNA-1
chr1_4 exon 38218881 38219011 38218881 ID=Msa0162050-mRNA-1:exon:11192;Parent=Msa0162050-mRNA-1
chr1_4 exon 38219561 38219911 38219561 ID=Msa0162050-mRNA-1:exon:11193;Parent=Msa0162050-mRNA-1
chr1_4 exon 38220688 38220844 38220688 ID=Msa0162050-mRNA-1:exon:11194;Parent=Msa0162050-mRNA-1
chr1_4 exon 38221037 38221329 38221037 ID=Msa0162050-mRNA-1:exon:11195;Parent=Msa0162050-mRNA-1
chr1_4 exon 38222755 38222814 38222755 ID=Msa0162050-mRNA-1:exon:11196;Parent=Msa0162050-mRNA-1
chr1_4 exon 38222923 38223012 38222923 ID=Msa0162050-mRNA-1:exon:11197;Parent=Msa0162050-mRNA-1
chr1_4 exon 38223168 38223418 38223168 ID=Msa0162050-mRNA-1:exon:11198;Parent=Msa0162050-mRNA-1
chr1_4 exon 38223439 38223675 38223439 ID=Msa0162050-mRNA-1:exon:11199;Parent=Msa0162050-mRNA-1
chr1_4 five_prime_UTR 38216739 38216904 38216739 ID=Msa0162050-mRNA-1:five_prime_utr;Parent=Msa0162050-mRNA-1
chr1_4 CDS 38216905 38217729 38216905 ID=Msa0162050-mRNA-1:cds;Parent=Msa0162050-mRNA-1
chr1_4 CDS 38218310 38218799 38218310 ID=Msa0162050-mRNA-1:cds;Parent=Msa0162050-mRNA-1
chr1_4 CDS 38218881 38219011 38218881 ID=Msa0162050-mRNA-1:cds;Parent=Msa0162050-mRNA-1
chr1_4 CDS 38219561 38219911 38219561 ID=Msa0162050-mRNA-1:cds;Parent=Msa0162050-mRNA-1
chr1_4 CDS 38220688 38220844 38220688 ID=Msa0162050-mRNA-1:cds;Parent=Msa0162050-mRNA-1
chr1_4 CDS 38221037 38221329 38221037 ID=Msa0162050-mRNA-1:cds;Parent=Msa0162050-mRNA-1
chr1_4 CDS 38222755 38222814 38222755 ID=Msa0162050-mRNA-1:cds;Parent=Msa0162050-mRNA-1
chr1_4 CDS 38222923 38223012 38222923 ID=Msa0162050-mRNA-1:cds;Parent=Msa0162050-mRNA-1
chr1_4 CDS 38223168 38223287 38223168 ID=Msa0162050-mRNA-1:cds;Parent=Msa0162050-mRNA-1
chr1_4 three_prime_UTR 38223288 38223418 38223288 ID=Msa0162050-mRNA-1:three_prime_utr;Parent=Msa0162050-mRNA-1
chr1_4 three_prime_UTR 38223439 38223675 38223439 ID=Msa0162050-mRNA-1:three_prime_utr;Parent=Msa0162050-mRNA-1
Gene Sequence

>Msa0162050

ATGGCTCTTCTTCCCACTCGCCAACTTCACCCATTTCACACTTCTCCTAACTTTCATCATTCTCTCCGTTTCTTCACCACAATTTCTTCTTCTTCAATCCATAAAAGCTTCACTTTCAAAACACCCACAAAAAATTTCACTTATCTTTCTTCAAAAAATCCCATTTTTTACCATAAGAGTTTCTGCACTGATACATGGTTAAAACGCTGGAATGAACACAATCGCCCGAAACCGCCACGCGGGGTTTTAAATTATCAAGGTTCTGGAAATGGGCATTCATCAAAATCTGATTTTGATAGCTCTGATGATGAAGATTTTGGTGGTAGTAGAATGGATAGAATTGTTGAGAAATTGAAGAAATTTGGGTATGAAAGTGATGAAAATGAGAATTTAGAAGAAGAAGGAGTGATAGAAAAAGGGTCAGTAGAGGATATATTTTATGTAGAAGAAGGAATGTTGCCTAATACAAGAGGTGGGTTTTCGCCGGAATCACCATTTGGGATTGGAAGTTATGGAAGTGGTGATGGTGGTGAAGTGAGGTTTCCTTGGGAGAAACCAGTAGTGGATGAAGAAGTTGAAGAGAGGACGAGTTCGCGGAAGAAGAGTAAGACTTCTATGGCGGAATTGACTCTTCCTGAGTCTGAATTGAGGAGGTTGCTGAAGTTAACTTTTATGAAGAAGCATAAGACGAGAATCGGTGGTGGTGGTGTTACTCAAGCTGTTGTTGATAAGATTCATGAGAGGTGGAAGACTTCTGAGATTGTTAGGCTTAAGTTTGAAGGTGATGCTGCACTTAACATGAAGAGGATGCATGAGATATTGGAGAAAAAAACTGGTGGTCTGGTGATTTGGAGGTCTGGCAACTCTGTTTCCTTGTACAGAGGTGTGAGCTACAAGGATCCTTCAATACAACAGAATAAACAGTTATATAGGAAAAACGAGAAATCTTCGAAGTTTCTATCAGCACCTTCGGATGATTTTGAAGTGGAGCCTTCTGAGTTTACTTCTGATTCTGAGACAAAAACATCGTTGGAAAAATTGGAATCTACAAATGATCAGAAAGAAAAAGTTAATCTGCCAAAAGTCAGTTATGAAGATGAAGTAGACAAGTTATTGGATGGTCTAGGTCCTAGATATACAGATTGGCCTGGATGTGAGCCACTGCCTGTCGATGCGGATATGCTTTCTCCAACTGTTCCTGGTTACCAACCTCCCTTCAGAGTTCTTCCTTTCGGAGTGAGACCGACACTTGGTTTCAAGGAGGCAACTTCTCTACGAAGGATTGCTAGGGGACTCCCTCCACATTTTGCATTAGGTAGAAACAGGCAGCTTCAAGGTTTAGCTGCAGCCATGATCAAATTGTGGGAAAAAAGTTCTATAGCTAAAGTTGCACTAAAACGTGGTGTGCAGCTAACTACCAGCGAGAGAATGGCAGAAGAGATCAAGAAATTGACAGGTGGCATAATACTCTCCAGAAATAAAGACTTCTTGGTCTTTTATCGAGGGAAGAATTTTTTATCACCAGATGTCACTCAAGCCTTGCTAGAGAGGGAAAGAATGGCCAAAGCAATGCAGGATGAGGAGGAGCAAGCAAGATTGAGAGCGTCATCATTGATCTTACCAGCTATTAATACATCAGAGTTGTCAGCGGAGGCTGGGACTCTTGGCGAAACTTTGGATGCAGATGCTAAGTGGGGAAAGACATTGGATGAGAGTCATGAGCAAAAGGTTATGAGAGAAGTAGAACAACTACGGCATGCCAACATTGTTAGAAAGTTAGAAGAGAAGCTTTCACTTGCTGAAAGAAAGATAAGGAGAGCTGAAAGAGCCCTAACGAAGGTGGAGGTGTCTTTGAAGCCATCAGAAAACAGAGCAGACCCTGAAAGTATAACCGATGAAGAGAGATTTATGTTTCGGAAATTAGGATTGCGGATGAAAGCTTTCTTACTTCTTGGTAGACGTGGAGTTTTTGACGGTACTATCGAGAACATGCACTTGCACTGGAAGTACCGGGAACTGGTCAAGATAATTGTTAAGGCTAACAACTTTGAACATGTAAAAAAAATTGCACTAGCACTTGAAGCTGAGAGTGGTGGTGTTCTGGTTTCAGTTGACAAAGTTTCAAAAGGATATTCTATACTTGTTTACCGGGGAAAGGATTACCAGCGCCCTTCAATGATGAGACCAAAGAATCTCTTGACAAAGAGAAAGGCTTTGGCACGTTCAATCGAGCTTCAACGACATGAGGCACTTTCAAGTCATATTTCAACTTTGCAAAGTAGAGTGGAGAAGTTAAGATCCGAAATAGAACAAATAGAGAAAGCAAAGGAGGAAGGAGACGAAGCATTGTATAACAGATTAGATTCGGCTTATTCTACAGATGATGATAACTCTGAGGCGGAGGATGATGAGGAAGAAGTTGAGGCATATCTTCAGAGCGACAATGATGAAAATGATAGTGAAGTTGAAAGTGATATTATTTATTTCCAACCTGAGGAATTTGCCTCACAAAATTGA
Protein sequence

>Msa0162050

MALLPTRQLHPFHTSPNFHHSLRFFTTISSSSIHKSFTFKTPTKNFTYLSSKNPIFYHKSFCTDTWLKRWNEHNRPKPPRGVLNYQGSGNGHSSKSDFDSSDDEDFGGSRMDRIVEKLKKFGYESDENENLEEEGVIEKGSVEDIFYVEEGMLPNTRGGFSPESPFGIGSYGSGDGGEVRFPWEKPVVDEEVEERTSSRKKSKTSMAELTLPESELRRLLKLTFMKKHKTRIGGGGVTQAVVDKIHERWKTSEIVRLKFEGDAALNMKRMHEILEKKTGGLVIWRSGNSVSLYRGVSYKDPSIQQNKQLYRKNEKSSKFLSAPSDDFEVEPSEFTSDSETKTSLEKLESTNDQKEKVNLPKVSYEDEVDKLLDGLGPRYTDWPGCEPLPVDADMLSPTVPGYQPPFRVLPFGVRPTLGFKEATSLRRIARGLPPHFALGRNRQLQGLAAAMIKLWEKSSIAKVALKRGVQLTTSERMAEEIKKLTGGIILSRNKDFLVFYRGKNFLSPDVTQALLERERMAKAMQDEEEQARLRASSLILPAINTSELSAEAGTLGETLDADAKWGKTLDESHEQKVMREVEQLRHANIVRKLEEKLSLAERKIRRAERALTKVEVSLKPSENRADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIVKANNFEHVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYQRPSMMRPKNLLTKRKALARSIELQRHEALSSHISTLQSRVEKLRSEIEQIEKAKEEGDEALYNRLDSAYSTDDDNSEAEDDEEEVEAYLQSDNDENDSEVESDIIYFQPEEFASQN*