AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1267330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1267330 MtrunA17_Chr4g0076721 83.285 347 23 7 3 334 8 334 0.0 510
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1267330 AT2G02410.3 71.318 258 66 4 77 334 10 259 1.69e-131 375
Msa1267330 AT2G02410.1 71.318 258 66 4 77 334 58 307 3.27e-131 377
Msa1267330 AT2G02410.6 64.336 286 66 5 77 334 58 335 5.23e-125 362
Msa1267330 AT2G02410.2 71.008 238 61 4 97 334 13 242 7.95e-119 343
Msa1267330 AT2G02410.5 73.128 227 53 4 108 334 3 221 3.35e-116 335
Msa1267330 AT2G02410.13 73.128 227 53 4 108 334 3 221 3.35e-116 335
Msa1267330 AT2G02410.12 69.231 195 52 4 77 271 10 196 3.76e-92 274
Msa1267330 AT2G02410.11 69.231 195 52 4 77 271 58 244 7.76e-92 275
Msa1267330 AT2G02410.8 69.231 195 52 4 77 271 58 244 7.76e-92 275
Msa1267330 AT2G02410.9 65.868 167 49 4 77 243 10 168 8.36e-71 219
Msa1267330 AT2G02410.7 65.476 168 50 4 77 244 58 217 1.31e-70 220
Msa1267330 AT2G02410.10 65.476 168 50 4 77 244 58 217 1.31e-70 220
Msa1267330 AT2G02410.4 56.410 195 49 5 77 243 58 244 1.33e-64 205

Find 77 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTAGGTTTCAGCTTTAA+AGG 0.156682 8_2:+72470327 Msa1267330:intron
CTTCTTATTGTAATTGTAAT+TGG 0.157438 8_2:-72469491 None:intergenic
ATTCTTCTTGCTGCTGCTTT+TGG 0.158995 8_2:-72469563 None:intergenic
ATTGTAATTGTAATTGGAAT+TGG 0.301174 8_2:-72469485 None:intergenic
AGGATGGTTGCCCCAAAGTC+TGG 0.335763 8_2:+72470350 Msa1267330:CDS
TTGGCGTTAGAAGTGATTCT+AGG 0.343874 8_2:-72469649 None:intergenic
GGAAGAATATTCCTTGTGAT+TGG 0.354869 8_2:-72470147 None:intergenic
AGTTATCAGCCATGATGTTA+AGG 0.355990 8_2:-72475175 None:intergenic
TAACCATCAACAAGCAAAAC+AGG 0.364806 8_2:-72469969 None:intergenic
GTTACAATGTCTGTGGATAT+TGG 0.373030 8_2:+72469988 Msa1267330:CDS
TTTACGTGTTTACAATATCT+TGG 0.376596 8_2:-72475260 None:intergenic
GAAGAATATTCCTTGTGATT+GGG 0.378710 8_2:-72470146 None:intergenic
AACGAACAAGATGATGATAA+TGG 0.382465 8_2:-72469436 None:intergenic
GTTATCAGCCATGATGTTAA+GGG 0.389151 8_2:-72475174 None:intergenic
TAAGTTCGTCAATAAGCTTC+TGG 0.389972 8_2:-72470058 None:intergenic
TGATTTGAATGAATTTAGTT+AGG 0.391080 8_2:+72469365 Msa1267330:five_prime_UTR
GAAGTGATTCTAGGAGGAGT+TGG 0.391837 8_2:-72469640 None:intergenic
GTATTTGATGCCATGATGTC+TGG 0.393030 8_2:+72470119 Msa1267330:CDS
ATTCTAGGAGGAGTTGGAGT+TGG 0.400020 8_2:-72469634 None:intergenic
CGGTAACTAGTTGAAGGTCT+TGG 0.402341 8_2:-72469816 None:intergenic
GGAGGAGTTGGAGTTGGAGT+TGG 0.403011 8_2:-72469628 None:intergenic
CTACACAAATCAGCTGGGTC+TGG 0.405922 8_2:+72469917 Msa1267330:CDS
ACCTTCGCTTCCTCAAGATA+TGG 0.413759 8_2:+72469677 Msa1267330:CDS
AGAAGTGACGACCCAGACTT+TGG 0.415939 8_2:-72470362 None:intergenic
GAAGTGACGACCCAGACTTT+GGG 0.421042 8_2:-72470361 None:intergenic
TACACAAATCAGCTGGGTCT+GGG 0.429102 8_2:+72469918 Msa1267330:CDS
AACTTTCGAGTTAATAATGA+AGG 0.436263 8_2:-72475147 None:intergenic
GTGTAGTAGAGGGAGGTTGT+TGG 0.441657 8_2:-72469900 None:intergenic
GAGGAAGCGAAGGTTCTGTT+TGG 0.441688 8_2:-72469668 None:intergenic
AGTTGAAGGTCTTGGAGTGC+TGG 0.452523 8_2:-72469808 None:intergenic
GAATTTAGTTAGGTAGATGA+TGG 0.464900 8_2:+72469375 Msa1267330:five_prime_UTR
CTGATGCATCTGCTGATACA+TGG 0.474850 8_2:+72470192 Msa1267330:CDS
AAAGAAGAAGGCCGAGAAAG+AGG 0.474951 8_2:+72469842 Msa1267330:CDS
AAGAATATTCCTTGTGATTG+GGG 0.489548 8_2:-72470145 None:intergenic
CCTCTACTACACAAATCAGC+TGG 0.492718 8_2:+72469911 Msa1267330:CDS
ATCCGCAAGATCCTCTTTCT+CGG 0.497073 8_2:-72469853 None:intergenic
TGTTTGGAGCAGCAAGGCAT+TGG 0.500774 8_2:+72470656 Msa1267330:CDS
GATCACGATAGAGGTCAGTT+TGG 0.509125 8_2:-72469878 None:intergenic
GTAGATCAAGGCATCACAAA+AGG 0.512172 8_2:+72470928 Msa1267330:intron
CAATCTACCTTGAAAAGAAG+TGG 0.518431 8_2:-72474941 None:intergenic
CACAAATCAGCTGGGTCTGG+GGG 0.522721 8_2:+72469920 Msa1267330:CDS
ACACAAATCAGCTGGGTCTG+GGG 0.528145 8_2:+72469919 Msa1267330:CDS
AATCACAAGGAATATTCTTC+CGG 0.528595 8_2:+72470149 Msa1267330:CDS
CCAGCTGATTTGTGTAGTAG+AGG 0.530779 8_2:-72469911 None:intergenic
TGAGAAAACAATGTCGATGC+CGG 0.535047 8_2:-72470168 None:intergenic
GTTTCAGCTTTAAAGGAGGA+TGG 0.538423 8_2:+72470334 Msa1267330:CDS
CACCTTTAGTATGCTTAGAG+AGG 0.540405 8_2:+72470082 Msa1267330:CDS
CAATCTTGATGCAGAAGTAG+TGG 0.544356 8_2:+72474972 Msa1267330:CDS
AGGTTGTTGGATCACGATAG+AGG 0.546658 8_2:-72469887 None:intergenic
GGATGGTTGCCCCAAAGTCT+GGG 0.556380 8_2:+72470351 Msa1267330:CDS
TGCCTTGCTGCTCCAAACAA+AGG 0.558029 8_2:-72470652 None:intergenic
GACCTCTCTAAGCATACTAA+AGG 0.559341 8_2:-72470084 None:intergenic
ATTGGGGAATCCAGACATCA+TGG 0.573403 8_2:-72470129 None:intergenic
CTCTACTACACAAATCAGCT+GGG 0.575051 8_2:+72469912 Msa1267330:CDS
AGTTGAAACCCTTAACATCA+TGG 0.578393 8_2:+72475166 Msa1267330:three_prime_UTR
GGCCGAGAAAGAGGATCTTG+CGG 0.579972 8_2:+72469851 Msa1267330:CDS
GGCCTTTGTTTGGAGCAGCA+AGG 0.582037 8_2:+72470650 Msa1267330:CDS
CAGCTGATTTGTGTAGTAGA+GGG 0.582819 8_2:-72469910 None:intergenic
TCCATATCTTGAGGAAGCGA+AGG 0.583867 8_2:-72469678 None:intergenic
TTTAGTTAGGTAGATGATGG+AGG 0.586119 8_2:+72469378 Msa1267330:five_prime_UTR
AAGAGATGCTTCAAGAGCAA+AGG 0.590832 8_2:+72470957 Msa1267330:CDS
AAGTGACGACCCAGACTTTG+GGG 0.593977 8_2:-72470360 None:intergenic
TACCTACCTTCCATATCTTG+AGG 0.597905 8_2:-72469687 None:intergenic
GAACTAATTGAATATGACAC+TGG 0.598924 8_2:+72475222 Msa1267330:three_prime_UTR
CGAAATGAAAGTAGTTCCGA+AGG 0.612203 8_2:+72469294 None:intergenic
TGTCAACAACAAGCAGCACA+TGG 0.612468 8_2:+72470391 Msa1267330:CDS
GTCTGGATTCCCCAATCACA+AGG 0.613410 8_2:+72470136 Msa1267330:CDS
CTGATTTGTGTAGTAGAGGG+AGG 0.619033 8_2:-72469907 None:intergenic
ACAAATCAGCTGGGTCTGGG+GGG 0.619536 8_2:+72469921 Msa1267330:CDS
GTTGATGGTTACAATGTCTG+TGG 0.627615 8_2:+72469981 Msa1267330:CDS
GCGTTAGAAGTGATTCTAGG+AGG 0.630133 8_2:-72469646 None:intergenic
TCGCTTCCTCAAGATATGGA+AGG 0.635284 8_2:+72469681 Msa1267330:CDS
TTAGGTTTCAGCTTTAAAGG+AGG 0.636930 8_2:+72470330 Msa1267330:intron
GATCAAGGCATCACAAAAGG+AGG 0.644648 8_2:+72470931 Msa1267330:intron
AACCATCAACAAGCAAAACA+GGG 0.648456 8_2:-72469968 None:intergenic
TGGATGCTCTGAAGAACCTG+AGG 0.667302 8_2:+72474992 Msa1267330:CDS
CAGCAAGGCATTGGTAACCG+AGG 0.676741 8_2:+72470665 Msa1267330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATATTATTATTTATTT+AGG + chr8_2:72469767-72469786 Msa1267330:intron 0.0%
!!! TATTTTATTTTATTTTTGTG+TGG - chr8_2:72469326-72469345 None:intergenic 10.0%
!! TATGTTATATACAAATAGTT+GGG - chr8_2:72471566-72471585 None:intergenic 15.0%
!! ATATGTTATATACAAATAGT+TGG - chr8_2:72471567-72471586 None:intergenic 15.0%
!! ACTATTTGTATATAACATAT+TGG + chr8_2:72471567-72471586 Msa1267330:intron 15.0%
!! AACAAAGAAGTTAATAAATT+AGG - chr8_2:72472005-72472024 None:intergenic 15.0%
!! ATATAAAGAATGACAAAAAT+AGG - chr8_2:72472860-72472879 None:intergenic 15.0%
!!! TTTTTTTATCACTGTAATTA+AGG - chr8_2:72473406-72473425 None:intergenic 15.0%
!! AATTAGAAGATAAATGTATT+AGG + chr8_2:72473735-72473754 Msa1267330:intron 15.0%
!!! TTTCACAAAAAAAAATGTTT+TGG + chr8_2:72473912-72473931 Msa1267330:intron 15.0%
!!! AAAAAATGTTTTGGATATAT+TGG + chr8_2:72473921-72473940 Msa1267330:intron 15.0%
!!! AAACAACTTTTTTTATTACA+GGG + chr8_2:72474802-72474821 Msa1267330:intron 15.0%
!!! TTTTATTTTATTTTGCATGT+CGG + chr8_2:72475120-72475139 Msa1267330:three_prime_UTR 15.0%
!! TGATTTGAATGAATTTAGTT+AGG + chr8_2:72469365-72469384 Msa1267330:five_prime_UTR 20.0%
!! ATTGTAATTGTAATTGGAAT+TGG - chr8_2:72469488-72469507 None:intergenic 20.0%
!! CTTCTTATTGTAATTGTAAT+TGG - chr8_2:72469494-72469513 None:intergenic 20.0%
!! CATTTGAAAAAAAGAAGAAA+AGG - chr8_2:72470562-72470581 None:intergenic 20.0%
!!! TTGAATCTCAAATTTTTGAA+TGG + chr8_2:72470740-72470759 Msa1267330:intron 20.0%
!! AACAAAACGAATATATCTAA+TGG - chr8_2:72471019-72471038 None:intergenic 20.0%
!! AAAATCACAATAGATAAAAC+TGG - chr8_2:72471144-72471163 None:intergenic 20.0%
!!! TTCTATTTTCCTTTTCATTA+TGG - chr8_2:72471265-72471284 None:intergenic 20.0%
!!! TATTGGTAATAATCTAACTT+TGG + chr8_2:72471584-72471603 Msa1267330:intron 20.0%
!! TTTAATGACATATATGTTGT+TGG - chr8_2:72471754-72471773 None:intergenic 20.0%
!! CTCAAGAAAATCAAATTATA+AGG - chr8_2:72471801-72471820 None:intergenic 20.0%
!! GACTAAATTTGAATTTGTAA+AGG + chr8_2:72472278-72472297 Msa1267330:intron 20.0%
!! TAAATTTGAATTTGTAAAGG+TGG + chr8_2:72472281-72472300 Msa1267330:intron 20.0%
!!! TATTTTAGCTCTTTAATCTA+AGG + chr8_2:72472799-72472818 Msa1267330:intron 20.0%
!! TTAATGTATTTATGGTATGA+AGG + chr8_2:72473311-72473330 Msa1267330:intron 20.0%
!! GTGAATGTTATAGTTATTAT+AGG + chr8_2:72473766-72473785 Msa1267330:intron 20.0%
!! TTATTATAGGTAATGATATG+AGG + chr8_2:72473779-72473798 Msa1267330:intron 20.0%
!! TATTATAGGTAATGATATGA+GGG + chr8_2:72473780-72473799 Msa1267330:intron 20.0%
!!! TCATTTTTAAACCATAAACT+TGG + chr8_2:72473833-72473852 Msa1267330:intron 20.0%
!!! CATTTTTAAACCATAAACTT+GGG + chr8_2:72473834-72473853 Msa1267330:intron 20.0%
!!! ATTTTTAAACCATAAACTTG+GGG + chr8_2:72473835-72473854 Msa1267330:intron 20.0%
!! TGAATATTATGTTATAGCTA+TGG + chr8_2:72474337-72474356 Msa1267330:intron 20.0%
!! AAACAAAACTTAGAAGAATT+AGG - chr8_2:72474475-72474494 None:intergenic 20.0%
!!! AATTCTTCTAAGTTTTGTTT+TGG + chr8_2:72474475-72474494 Msa1267330:intron 20.0%
!!! TTTTATAGATGTCTTATAGT+TGG + chr8_2:72474639-72474658 Msa1267330:intron 20.0%
!! TTTATAGATGTCTTATAGTT+GGG + chr8_2:72474640-72474659 Msa1267330:intron 20.0%
!! CAAGATTTACAACTTAATAT+TGG - chr8_2:72474685-72474704 None:intergenic 20.0%
!!! CAAACAACTTTTTTTATTAC+AGG + chr8_2:72474801-72474820 Msa1267330:intron 20.0%
!!! ACATGTGAATATGTTTTAAT+AGG + chr8_2:72475083-72475102 Msa1267330:three_prime_UTR 20.0%
!!! ATTTTATTTTTGTGTGGTTC+TGG - chr8_2:72469320-72469339 None:intergenic 25.0%
!! CTCAAAAAACATTTTCTCAA+TGG + chr8_2:72470017-72470036 Msa1267330:CDS 25.0%
! TATTCTTTACTCCTCAATTT+AGG + chr8_2:72470312-72470331 Msa1267330:intron 25.0%
!! AATTTAGGTTTCAGCTTTAA+AGG + chr8_2:72470327-72470346 Msa1267330:intron 25.0%
!!! TTCTTCTTTTTTTCAAATGC+TGG + chr8_2:72470563-72470582 Msa1267330:intron 25.0%
! TGTAATTGAGATTTATACTC+TGG + chr8_2:72470615-72470634 Msa1267330:intron 25.0%
!! GTCATATTAATGTTTTACCT+CGG - chr8_2:72470685-72470704 None:intergenic 25.0%
!! TCCTTCAATGATATTTTACA+TGG + chr8_2:72470881-72470900 Msa1267330:intron 25.0%
! ACCATGTAAAATATCATTGA+AGG - chr8_2:72470885-72470904 None:intergenic 25.0%
!! TTTTATGATTTTTCGCTGTA+TGG + chr8_2:72471046-72471065 Msa1267330:intron 25.0%
! CTTAATGAGTATCTAACTAT+GGG + chr8_2:72471183-72471202 Msa1267330:intron 25.0%
! TTAATGAGTATCTAACTATG+GGG + chr8_2:72471184-72471203 Msa1267330:intron 25.0%
! TTAGAAACTTTCTCCTATTA+AGG + chr8_2:72471291-72471310 Msa1267330:intron 25.0%
! TAGAAACTTTCTCCTATTAA+GGG + chr8_2:72471292-72471311 Msa1267330:intron 25.0%
! CTACATAAATACAGAAACTA+AGG - chr8_2:72471363-72471382 None:intergenic 25.0%
!! TAAATTTTCCCATCTCAAAA+TGG + chr8_2:72471437-72471456 Msa1267330:intron 25.0%
! AATCAAATTATAAGGACACA+TGG - chr8_2:72471793-72471812 None:intergenic 25.0%
!! TAAAAATCTGGAACAGTTAA+AGG - chr8_2:72471834-72471853 None:intergenic 25.0%
! GGAAATCAAAAGTAAAAATC+TGG - chr8_2:72471846-72471865 None:intergenic 25.0%
! TTAATAAATTAGGATGACCA+AGG - chr8_2:72471995-72472014 None:intergenic 25.0%
! TATCGTTCATTCTGATATAT+AGG + chr8_2:72472131-72472150 Msa1267330:intron 25.0%
! ATCGTTCATTCTGATATATA+GGG + chr8_2:72472132-72472151 Msa1267330:intron 25.0%
!! CTATTTTGTAGTTCTTATTC+AGG - chr8_2:72472603-72472622 None:intergenic 25.0%
!! TAAAAAGTATATTGCTGGAT+TGG - chr8_2:72472752-72472771 None:intergenic 25.0%
!! ACATCTAAAAAGTATATTGC+TGG - chr8_2:72472757-72472776 None:intergenic 25.0%
! AGGTTTCTATTAATTGAAGA+AGG + chr8_2:72472978-72472997 Msa1267330:intron 25.0%
!!! TCCAAAAACTATTTTTCTTG+GGG - chr8_2:72473238-72473257 None:intergenic 25.0%
!!! CTCCAAAAACTATTTTTCTT+GGG - chr8_2:72473239-72473258 None:intergenic 25.0%
! GTTGGATGTTAATGTATTTA+TGG + chr8_2:72473303-72473322 Msa1267330:intron 25.0%
!!! GAGCTTTGAAATGATTTATT+TGG - chr8_2:72473350-72473369 None:intergenic 25.0%
! AATTTCACAAACAAAACTCA+AGG - chr8_2:72473641-72473660 None:intergenic 25.0%
! ATCTCTATGTATTCAACATT+GGG + chr8_2:72474104-72474123 Msa1267330:intron 25.0%
! GAAATAGATCACACATTAAT+AGG - chr8_2:72474233-72474252 None:intergenic 25.0%
! TTAATGTGTGATCTATTTCA+AGG + chr8_2:72474234-72474253 Msa1267330:intron 25.0%
!!! TCAAGGTATTGTACATTAAT+TGG + chr8_2:72474251-72474270 Msa1267330:intron 25.0%
!!! AGAAGCATAATGTAGTTTTT+TGG + chr8_2:72474300-72474319 Msa1267330:intron 25.0%
! AGTAACAGTTTCATTCATAT+AGG - chr8_2:72474374-72474393 None:intergenic 25.0%
! TATCACAAAAAATGTTCTCA+TGG + chr8_2:72474555-72474574 Msa1267330:intron 25.0%
! ATCACAAAAAATGTTCTCAT+GGG + chr8_2:72474556-72474575 Msa1267330:intron 25.0%
! TTATAGATGTCTTATAGTTG+GGG + chr8_2:72474641-72474660 Msa1267330:intron 25.0%
!! ATTAAGTTGTAAATCTTGTG+TGG + chr8_2:72474687-72474706 Msa1267330:intron 25.0%
!! TTAAGTTGTAAATCTTGTGT+GGG + chr8_2:72474688-72474707 Msa1267330:intron 25.0%
! TCATTTCATGTTATTGAGTT+AGG - chr8_2:72474761-72474780 None:intergenic 25.0%
! AACTCAATAACATGAAATGA+TGG + chr8_2:72474761-72474780 Msa1267330:intron 25.0%
! ACTCAATAACATGAAATGAT+GGG + chr8_2:72474762-72474781 Msa1267330:intron 25.0%
!!! AACTTTCGAGTTAATAATGA+AGG - chr8_2:72475150-72475169 None:intergenic 25.0%
! TTTACGTGTTTACAATATCT+TGG - chr8_2:72475263-72475282 None:intergenic 25.0%
GAATTTAGTTAGGTAGATGA+TGG + chr8_2:72469375-72469394 Msa1267330:five_prime_UTR 30.0%
AACGAACAAGATGATGATAA+TGG - chr8_2:72469439-72469458 None:intergenic 30.0%
! TTTTTACGGTAACTAGTTGA+AGG - chr8_2:72469825-72469844 None:intergenic 30.0%
TAGTTACCGTAAAAAGAAGA+AGG + chr8_2:72469830-72469849 Msa1267330:CDS 30.0%
AAGAATATTCCTTGTGATTG+GGG - chr8_2:72470148-72470167 None:intergenic 30.0%
GAAGAATATTCCTTGTGATT+GGG - chr8_2:72470149-72470168 None:intergenic 30.0%
AATCACAAGGAATATTCTTC+CGG + chr8_2:72470149-72470168 Msa1267330:CDS 30.0%
! TGATACATGGATTGAAAAAG+AGG + chr8_2:72470205-72470224 Msa1267330:CDS 30.0%
TAAAGCTGAAACCTAAATTG+AGG - chr8_2:72470326-72470345 None:intergenic 30.0%
GAGAGAACAATAGTTATGAT+TGG - chr8_2:72470482-72470501 None:intergenic 30.0%
! TTTATACTCTGGATGTTTTC+AGG + chr8_2:72470626-72470645 Msa1267330:intron 30.0%
! TTATACTCTGGATGTTTTCA+GGG + chr8_2:72470627-72470646 Msa1267330:intron 30.0%
TGTCACACTAATCAAAGATT+TGG - chr8_2:72470832-72470851 None:intergenic 30.0%
GTGACAAATTGACAATCATT+TGG + chr8_2:72470846-72470865 Msa1267330:intron 30.0%
!! GGTCTTGTTTATTACTTGTT+TGG + chr8_2:72470902-72470921 Msa1267330:intron 30.0%
CCATAGTTAGATACTCATTA+AGG - chr8_2:72471185-72471204 None:intergenic 30.0%
CCTTAATGAGTATCTAACTA+TGG + chr8_2:72471182-72471201 Msa1267330:intron 30.0%
CTTGCATTGTAATTCTTGAT+GGG + chr8_2:72471220-72471239 Msa1267330:intron 30.0%
AAAGTTCTGCCATAATGAAA+AGG + chr8_2:72471253-72471272 Msa1267330:intron 30.0%
AGATTATATCCTCCCTTAAT+AGG - chr8_2:72471307-72471326 None:intergenic 30.0%
ATACAAATAGTTGGGATTGT+CGG - chr8_2:72471558-72471577 None:intergenic 30.0%
AGAGAAAAAAGACAAGTGAT+TGG - chr8_2:72471648-72471667 None:intergenic 30.0%
TACTTTGTGATACTTTCTGA+TGG + chr8_2:72471691-72471710 Msa1267330:intron 30.0%
!!! TTTTGATTTCCTTACTATCC+TGG + chr8_2:72471855-72471874 Msa1267330:intron 30.0%
TAGTGAATGTTAAAGACCAT+TGG + chr8_2:72471879-72471898 Msa1267330:intron 30.0%
TGAATTTGGCTAGAAAATGA+AGG - chr8_2:72472087-72472106 None:intergenic 30.0%
TCAGTCATTAAGACGAATAA+GGG - chr8_2:72472199-72472218 None:intergenic 30.0%
ATCAGTCATTAAGACGAATA+AGG - chr8_2:72472200-72472219 None:intergenic 30.0%
! TTGTGATTTTCCATTGTTGT+TGG - chr8_2:72472340-72472359 None:intergenic 30.0%
!! CTCGTAGCTTGTTTAATATT+GGG - chr8_2:72472363-72472382 None:intergenic 30.0%
!! TCTCGTAGCTTGTTTAATAT+TGG - chr8_2:72472364-72472383 None:intergenic 30.0%
AATGAGTAATGTGTAAAAGC+AGG - chr8_2:72472686-72472705 None:intergenic 30.0%
!! TGAACCTAGTATACTTTTTG+AGG + chr8_2:72472823-72472842 Msa1267330:intron 30.0%
! AAAGCCTCAAAAAGTATACT+AGG - chr8_2:72472830-72472849 None:intergenic 30.0%
AGAATGACAAAAATAGGAGT+AGG - chr8_2:72472854-72472873 None:intergenic 30.0%
ATCAACAGTATGAAAATCGT+TGG - chr8_2:72473035-72473054 None:intergenic 30.0%
! TCCCCAAGAAAAATAGTTTT+TGG + chr8_2:72473234-72473253 Msa1267330:intron 30.0%
!! CCTCCAAAAACTATTTTTCT+TGG - chr8_2:72473240-72473259 None:intergenic 30.0%
!! CCAAGAAAAATAGTTTTTGG+AGG + chr8_2:72473237-72473256 Msa1267330:intron 30.0%
! GGTATGAAGGTTGATTTATA+AGG + chr8_2:72473324-72473343 Msa1267330:intron 30.0%
!! AAAAGGCACTCTCAAATATA+TGG + chr8_2:72473380-72473399 Msa1267330:intron 30.0%
AGTCAAATTGAAGACATCTA+GGG - chr8_2:72473437-72473456 None:intergenic 30.0%
AAGTCAAATTGAAGACATCT+AGG - chr8_2:72473438-72473457 None:intergenic 30.0%
! ATGTCTTCAATTTGACTTCT+TGG + chr8_2:72473440-72473459 Msa1267330:intron 30.0%
! TTCAATTTGACTTCTTGGTA+TGG + chr8_2:72473445-72473464 Msa1267330:intron 30.0%
GTGAAGAAGAGACATATATA+TGG + chr8_2:72473531-72473550 Msa1267330:intron 30.0%
ATATATGGAGAAACCACTAA+AGG + chr8_2:72473546-72473565 Msa1267330:intron 30.0%
!!! AGTTTTGTTGTGCAATCATT+TGG + chr8_2:72473662-72473681 Msa1267330:intron 30.0%
GAGATAGCTTATTCAGAAAA+TGG + chr8_2:72473882-72473901 Msa1267330:intron 30.0%
AGCATAATCAATTGAAATCC+TGG + chr8_2:72473952-72473971 Msa1267330:intron 30.0%
TGTTAACAGAAAAGGGAAAT+TGG + chr8_2:72473986-72474005 Msa1267330:intron 30.0%
! CTTGTGTAATTATTCTGAGA+TGG - chr8_2:72474044-72474063 None:intergenic 30.0%
CAATGTTGAATACATAGAGA+TGG - chr8_2:72474105-72474124 None:intergenic 30.0%
CATCTCTATGTATTCAACAT+TGG + chr8_2:72474103-72474122 Msa1267330:intron 30.0%
TCTCTATGTATTCAACATTG+GGG + chr8_2:72474105-72474124 Msa1267330:intron 30.0%
!! TATGATGCATAAGAGTACTT+TGG + chr8_2:72474137-72474156 Msa1267330:intron 30.0%
!! ATAAGAGTACTTTGGATCAA+GGG + chr8_2:72474145-72474164 Msa1267330:intron 30.0%
!!! GCATAATGTAGTTTTTTGGT+CGG + chr8_2:72474304-72474323 Msa1267330:intron 30.0%
!!! CATAATGTAGTTTTTTGGTC+GGG + chr8_2:72474305-72474324 Msa1267330:intron 30.0%
! AGTTCTAACTTAGAAGACTT+AGG - chr8_2:72474510-72474529 None:intergenic 30.0%
ACATTAGTAAGCAAACCAAT+CGG - chr8_2:72474907-72474926 None:intergenic 30.0%
GAACTAATTGAATATGACAC+TGG + chr8_2:72475222-72475241 Msa1267330:three_prime_UTR 30.0%
! TTTCTATAGATTTTTGCCTG+TGG + chr8_2:72475327-72475346 Msa1267330:three_prime_UTR 30.0%
! TTCTATAGATTTTTGCCTGT+GGG + chr8_2:72475328-72475347 Msa1267330:three_prime_UTR 30.0%
! TTTAGTTAGGTAGATGATGG+AGG + chr8_2:72469378-72469397 Msa1267330:five_prime_UTR 35.0%
AACCATCAACAAGCAAAACA+GGG - chr8_2:72469971-72469990 None:intergenic 35.0%
TAACCATCAACAAGCAAAAC+AGG - chr8_2:72469972-72469991 None:intergenic 35.0%
GTTACAATGTCTGTGGATAT+TGG + chr8_2:72469988-72470007 Msa1267330:CDS 35.0%
TAAGTTCGTCAATAAGCTTC+TGG - chr8_2:72470061-72470080 None:intergenic 35.0%
GGAAGAATATTCCTTGTGAT+TGG - chr8_2:72470150-72470169 None:intergenic 35.0%
!! TTAGGTTTCAGCTTTAAAGG+AGG + chr8_2:72470330-72470349 Msa1267330:intron 35.0%
!! TTAGTTTGCACAGATCAACA+AGG - chr8_2:72470504-72470523 None:intergenic 35.0%
TTGTTGATCTGTGCAAACTA+AGG + chr8_2:72470503-72470522 Msa1267330:intron 35.0%
! TATACTCTGGATGTTTTCAG+GGG + chr8_2:72470628-72470647 Msa1267330:intron 35.0%
ACATGACCATACAGTTAAAG+AGG + chr8_2:72470797-72470816 Msa1267330:intron 35.0%
TCTGAACCTCTTTAACTGTA+TGG - chr8_2:72470806-72470825 None:intergenic 35.0%
CTTGTTTGGATAGTAGATCA+AGG + chr8_2:72470916-72470935 Msa1267330:intron 35.0%
GCTTGCATTGTAATTCTTGA+TGG + chr8_2:72471219-72471238 Msa1267330:intron 35.0%
AAACTTTCTCCTATTAAGGG+AGG + chr8_2:72471295-72471314 Msa1267330:intron 35.0%
!!! CTCTAGTACCATTTTGAGAT+GGG - chr8_2:72471448-72471467 None:intergenic 35.0%
!! TCTCTAGTACCATTTTGAGA+TGG - chr8_2:72471449-72471468 None:intergenic 35.0%
GAGAAGTAAAAACAATGCCT+TGG - chr8_2:72471732-72471751 None:intergenic 35.0%
ATTCACTAACCAGGATAGTA+AGG - chr8_2:72471867-72471886 None:intergenic 35.0%
GTCTTTAACATTCACTAACC+AGG - chr8_2:72471876-72471895 None:intergenic 35.0%
ATGTTAAAGACCATTGGCAT+AGG + chr8_2:72471885-72471904 Msa1267330:intron 35.0%
TGTTAAAGACCATTGGCATA+GGG + chr8_2:72471886-72471905 Msa1267330:intron 35.0%
AGTATTGCTTATCATTGCCT+TGG + chr8_2:72471975-72471994 Msa1267330:intron 35.0%
AAGGACTGACATACTTCTTA+AGG - chr8_2:72472068-72472087 None:intergenic 35.0%
AGCCAAATTCAGAGTCAAAT+AGG + chr8_2:72472096-72472115 Msa1267330:intron 35.0%
GCCAAATTCAGAGTCAAATA+GGG + chr8_2:72472097-72472116 Msa1267330:intron 35.0%
ACCCTATTTGACTCTGAATT+TGG - chr8_2:72472101-72472120 None:intergenic 35.0%
TCAGAATGAACGATAGCAAA+AGG - chr8_2:72472126-72472145 None:intergenic 35.0%
!!! AAGGTGGAAATTTTGATTCG+AGG + chr8_2:72472297-72472316 Msa1267330:intron 35.0%
! TTGTTGTTGGTACATGTCAT+TGG - chr8_2:72472327-72472346 None:intergenic 35.0%
ATGACATGTACCAACAACAA+TGG + chr8_2:72472327-72472346 Msa1267330:intron 35.0%
!! CGTTGATAATAGTTTGTCTG+TGG - chr8_2:72472544-72472563 None:intergenic 35.0%
CCACTTAAACATCCAAATGA+GGG - chr8_2:72472661-72472680 None:intergenic 35.0%
CCTCATTTGGATGTTTAAGT+GGG + chr8_2:72472659-72472678 Msa1267330:intron 35.0%
! AAAGTATATTGCTGGATTGG+AGG - chr8_2:72472749-72472768 None:intergenic 35.0%
! AGATGTTACCTTCTTTGAAG+AGG + chr8_2:72472771-72472790 Msa1267330:intron 35.0%
ATATGATGCCTCTTCAAAGA+AGG - chr8_2:72472782-72472801 None:intergenic 35.0%
TTTATATCCCTTGAACCCAT+CGG + chr8_2:72472873-72472892 Msa1267330:intron 35.0%
GAAACCTCTCATTATGCAAA+TGG + chr8_2:72472944-72472963 Msa1267330:intron 35.0%
CATTCCATTTGCATAATGAG+AGG - chr8_2:72472951-72472970 None:intergenic 35.0%
AGTATGAAAATCGTTGGAGT+CGG - chr8_2:72473029-72473048 None:intergenic 35.0%
! CGATTTTCATACTGTTGATC+TGG + chr8_2:72473036-72473055 Msa1267330:intron 35.0%
! TGTCTTTTGTCTTTCTTCCT+AGG + chr8_2:72473118-72473137 Msa1267330:intron 35.0%
!! TCTTCCTAGGAATTTTAGTG+AGG + chr8_2:72473131-72473150 Msa1267330:intron 35.0%
!! ACTATTTTTCTTGGGGAAAG+AGG - chr8_2:72473231-72473250 None:intergenic 35.0%
! AATTGAAGACATCTAGGGTA+CGG - chr8_2:72473432-72473451 None:intergenic 35.0%
TTCTTGGTATGGCAACTATT+TGG + chr8_2:72473456-72473475 Msa1267330:intron 35.0%
! ACTAAAGGTTTGTCGCTTAA+GGG + chr8_2:72473561-72473580 Msa1267330:intron 35.0%
AAGTTGTAGCGATCTCTTTA+TGG + chr8_2:72473602-72473621 Msa1267330:intron 35.0%
TTTAACTCTCCCCAAGTTTA+TGG - chr8_2:72473847-72473866 None:intergenic 35.0%
! TTTTCTGTTAACATCCACGA+GGG - chr8_2:72473979-72473998 None:intergenic 35.0%
TCGTGGATGTTAACAGAAAA+GGG + chr8_2:72473979-72473998 Msa1267330:intron 35.0%
AACAGAAAAGGGAAATTGGT+TGG + chr8_2:72473990-72474009 Msa1267330:intron 35.0%
!! CATAAGAGTACTTTGGATCA+AGG + chr8_2:72474144-72474163 Msa1267330:intron 35.0%
AAGACAATGGAAATGCATTG+TGG + chr8_2:72474178-72474197 Msa1267330:intron 35.0%
AGACAATGGAAATGCATTGT+GGG + chr8_2:72474179-72474198 Msa1267330:intron 35.0%
TGGGATATTCTGATGTAGAT+TGG + chr8_2:72474198-72474217 Msa1267330:intron 35.0%
GGGATATTCTGATGTAGATT+GGG + chr8_2:72474199-72474218 Msa1267330:intron 35.0%
ATTAGGTTTGATGCAATGTG+AGG - chr8_2:72474458-72474477 None:intergenic 35.0%
! TGAAATGATGGGATCATGTA+AGG + chr8_2:72474773-72474792 Msa1267330:intron 35.0%
TACTAACTACAACAGAGAAG+TGG - chr8_2:72474854-72474873 None:intergenic 35.0%
! TACAGATCCACTTCTTTTCA+AGG + chr8_2:72474934-72474953 Msa1267330:intron 35.0%
CAATCTACCTTGAAAAGAAG+TGG - chr8_2:72474944-72474963 None:intergenic 35.0%
! TATCAGATAACTTTTGCCTC+AGG - chr8_2:72475011-72475030 None:intergenic 35.0%
AGTTGAAACCCTTAACATCA+TGG + chr8_2:72475166-72475185 Msa1267330:three_prime_UTR 35.0%
GTTATCAGCCATGATGTTAA+GGG - chr8_2:72475177-72475196 None:intergenic 35.0%
AGTTATCAGCCATGATGTTA+AGG - chr8_2:72475178-72475197 None:intergenic 35.0%
!!! ATTCTTCTTGCTGCTGCTTT+TGG - chr8_2:72469566-72469585 None:intergenic 40.0%
TTGGCGTTAGAAGTGATTCT+AGG - chr8_2:72469652-72469671 None:intergenic 40.0%
TTCCTCAAGATATGGAAGGT+AGG + chr8_2:72469685-72469704 Msa1267330:intron 40.0%
TACCTACCTTCCATATCTTG+AGG - chr8_2:72469690-72469709 None:intergenic 40.0%
!!! GAGTGCTGGATTTTCGTTTT+TGG - chr8_2:72469797-72469816 None:intergenic 40.0%
! TCTCGGCCTTCTTCTTTTTA+CGG - chr8_2:72469839-72469858 None:intergenic 40.0%
!! CAGCTGATTTGTGTAGTAGA+GGG - chr8_2:72469913-72469932 None:intergenic 40.0%
CTCTACTACACAAATCAGCT+GGG + chr8_2:72469912-72469931 Msa1267330:CDS 40.0%
!! GTTGATGGTTACAATGTCTG+TGG + chr8_2:72469981-72470000 Msa1267330:CDS 40.0%
CACCTTTAGTATGCTTAGAG+AGG + chr8_2:72470082-72470101 Msa1267330:CDS 40.0%
GACCTCTCTAAGCATACTAA+AGG - chr8_2:72470087-72470106 None:intergenic 40.0%
GTATTTGATGCCATGATGTC+TGG + chr8_2:72470119-72470138 Msa1267330:CDS 40.0%
TGAGAAAACAATGTCGATGC+CGG - chr8_2:72470171-72470190 None:intergenic 40.0%
!! GTTTCAGCTTTAAAGGAGGA+TGG + chr8_2:72470334-72470353 Msa1267330:CDS 40.0%
!! ATACTCTGGATGTTTTCAGG+GGG + chr8_2:72470629-72470648 Msa1267330:intron 40.0%
! GTAGATCAAGGCATCACAAA+AGG + chr8_2:72470928-72470947 Msa1267330:intron 40.0%
AAGAGATGCTTCAAGAGCAA+AGG + chr8_2:72470957-72470976 Msa1267330:CDS 40.0%
TGCACAGGCAATTAATACAC+AGG - chr8_2:72471079-72471098 None:intergenic 40.0%
! TATTGCATCTCAAGTTGCAC+AGG - chr8_2:72471094-72471113 None:intergenic 40.0%
! TTATGGCAGAACTTTTCTGC+AGG - chr8_2:72471248-72471267 None:intergenic 40.0%
TTCACCTATTGCTTGAACCA+GGG - chr8_2:72471483-72471502 None:intergenic 40.0%
TTTCACCTATTGCTTGAACC+AGG - chr8_2:72471484-72471503 None:intergenic 40.0%
ACTGCCTTCAACCATTAATC+TGG + chr8_2:72471619-72471638 Msa1267330:intron 40.0%
GTCACCAGATTAATGGTTGA+AGG - chr8_2:72471626-72471645 None:intergenic 40.0%
! GTGATTGGTCACCAGATTAA+TGG - chr8_2:72471633-72471652 None:intergenic 40.0%
!! GGCTCTAAATTACTTGTCCA+AGG + chr8_2:72471712-72471731 Msa1267330:intron 40.0%
GAGGAAAGTCTTGATGCAAT+GGG - chr8_2:72472171-72472190 None:intergenic 40.0%
AGAGGAAAGTCTTGATGCAA+TGG - chr8_2:72472172-72472191 None:intergenic 40.0%
AAGACGAATAAGGGACAAAG+AGG - chr8_2:72472190-72472209 None:intergenic 40.0%
TGTTGGTACATGTCATTGGT+AGG - chr8_2:72472323-72472342 None:intergenic 40.0%
GTGAAGTCAGTTACATCTGT+TGG - chr8_2:72472388-72472407 None:intergenic 40.0%
CGACACTTGATTCACTTGTT+GGG - chr8_2:72472471-72472490 None:intergenic 40.0%
CCAACAAGTGAATCAAGTGT+CGG + chr8_2:72472469-72472488 Msa1267330:intron 40.0%
CTAACATCCATGACAGATTG+TGG - chr8_2:72472509-72472528 None:intergenic 40.0%
CCCTCATTTGGATGTTTAAG+TGG + chr8_2:72472658-72472677 Msa1267330:intron 40.0%
CCCACTTAAACATCCAAATG+AGG - chr8_2:72472662-72472681 None:intergenic 40.0%
! ATTGCTGGATTGGAGGAATT+AGG - chr8_2:72472742-72472761 None:intergenic 40.0%
ATAATGAGAGGTTTCTGCTG+AGG - chr8_2:72472939-72472958 None:intergenic 40.0%
TGCAAATGGAATGTCATTCG+AGG + chr8_2:72472958-72472977 Msa1267330:intron 40.0%
GTATGAAAATCGTTGGAGTC+GGG - chr8_2:72473028-72473047 None:intergenic 40.0%
AGAGCCTCACTAAAATTCCT+AGG - chr8_2:72473138-72473157 None:intergenic 40.0%
GGCTCTCTCAATTGAGTTAA+AGG + chr8_2:72473152-72473171 Msa1267330:intron 40.0%
! CCAACAACAGTTTTTCGTCA+GGG - chr8_2:72473288-72473307 None:intergenic 40.0%
! TCCAACAACAGTTTTTCGTC+AGG - chr8_2:72473289-72473308 None:intergenic 40.0%
AAAGCTCGTGAACTGCAAAA+AGG + chr8_2:72473363-72473382 Msa1267330:intron 40.0%
GTATGGCAACTATTTGGCAT+TGG + chr8_2:72473462-72473481 Msa1267330:intron 40.0%
CTTAAGCGACAAACCTTTAG+TGG - chr8_2:72473562-72473581 None:intergenic 40.0%
! CACTAAAGGTTTGTCGCTTA+AGG + chr8_2:72473560-72473579 Msa1267330:intron 40.0%
! CTAAAGGTTTGTCGCTTAAG+GGG + chr8_2:72473562-72473581 Msa1267330:intron 40.0%
! TTTGTCGCTTAAGGGGATTA+AGG + chr8_2:72473569-72473588 Msa1267330:intron 40.0%
!! TGCAATCATTTGGTGTGACT+TGG + chr8_2:72473672-72473691 Msa1267330:intron 40.0%
CTTATTCAGAAAATGGCACG+CGG + chr8_2:72473889-72473908 Msa1267330:intron 40.0%
! CTTTTCTGTTAACATCCACG+AGG - chr8_2:72473980-72473999 None:intergenic 40.0%
CTCGTGGATGTTAACAGAAA+AGG + chr8_2:72473978-72473997 Msa1267330:intron 40.0%
! ATTGGTTGGTTCAAGAGACT+AGG + chr8_2:72474004-72474023 Msa1267330:intron 40.0%
AGAGACTAGGTGGTAAATGT+AGG + chr8_2:72474017-72474036 Msa1267330:intron 40.0%
ACTCATCATGTTAACTGCGA+AGG - chr8_2:72474073-72474092 None:intergenic 40.0%
! TTGGAGCAAACCTTGTTTAC+TGG + chr8_2:72474270-72474289 Msa1267330:intron 40.0%
! TGAAACTGTTACTTCACGAG+TGG + chr8_2:72474381-72474400 Msa1267330:intron 40.0%
CTTTAACAGATCCTACCGAT+TGG + chr8_2:72474889-72474908 Msa1267330:intron 40.0%
TAGTAAGCAAACCAATCGGT+AGG - chr8_2:72474903-72474922 None:intergenic 40.0%
CAATCTTGATGCAGAAGTAG+TGG + chr8_2:72474972-72474991 Msa1267330:CDS 40.0%
!!! TTTTGTGTGGTTCTGGCCTT+CGG - chr8_2:72469313-72469332 None:intergenic 45.0%
! ATTCTAGGAGGAGTTGGAGT+TGG - chr8_2:72469637-72469656 None:intergenic 45.0%
! GAAGTGATTCTAGGAGGAGT+TGG - chr8_2:72469643-72469662 None:intergenic 45.0%
GCGTTAGAAGTGATTCTAGG+AGG - chr8_2:72469649-72469668 None:intergenic 45.0%
ACCTTCGCTTCCTCAAGATA+TGG + chr8_2:72469677-72469696 Msa1267330:CDS 45.0%
TCCATATCTTGAGGAAGCGA+AGG - chr8_2:72469681-72469700 None:intergenic 45.0%
TCGCTTCCTCAAGATATGGA+AGG + chr8_2:72469681-72469700 Msa1267330:CDS 45.0%
CGGTAACTAGTTGAAGGTCT+TGG - chr8_2:72469819-72469838 None:intergenic 45.0%
AAAGAAGAAGGCCGAGAAAG+AGG + chr8_2:72469842-72469861 Msa1267330:CDS 45.0%
ATCCGCAAGATCCTCTTTCT+CGG - chr8_2:72469856-72469875 None:intergenic 45.0%
GATCACGATAGAGGTCAGTT+TGG - chr8_2:72469881-72469900 None:intergenic 45.0%
AGGTTGTTGGATCACGATAG+AGG - chr8_2:72469890-72469909 None:intergenic 45.0%
! CTGATTTGTGTAGTAGAGGG+AGG - chr8_2:72469910-72469929 None:intergenic 45.0%
!! CCAGCTGATTTGTGTAGTAG+AGG - chr8_2:72469914-72469933 None:intergenic 45.0%
CCTCTACTACACAAATCAGC+TGG + chr8_2:72469911-72469930 Msa1267330:CDS 45.0%
TACACAAATCAGCTGGGTCT+GGG + chr8_2:72469918-72469937 Msa1267330:CDS 45.0%
!! GTCCCTGTTTTGCTTGTTGA+TGG + chr8_2:72469966-72469985 Msa1267330:CDS 45.0%
ATTGGGGAATCCAGACATCA+TGG - chr8_2:72470132-72470151 None:intergenic 45.0%
CTGATGCATCTGCTGATACA+TGG + chr8_2:72470192-72470211 Msa1267330:CDS 45.0%
TGTCAACAACAAGCAGCACA+TGG + chr8_2:72470391-72470410 Msa1267330:CDS 45.0%
! GATCAAGGCATCACAAAAGG+AGG + chr8_2:72470931-72470950 Msa1267330:intron 45.0%
ATGAGCAATTGTAGTGGTGG+AGG - chr8_2:72471534-72471553 None:intergenic 45.0%
GGTATGAGCAATTGTAGTGG+TGG - chr8_2:72471537-72471556 None:intergenic 45.0%
GTCGGTATGAGCAATTGTAG+TGG - chr8_2:72471540-72471559 None:intergenic 45.0%
! TCTGGAACAGTTAAAGGCGT+GGG - chr8_2:72471828-72471847 None:intergenic 45.0%
! ATCTGGAACAGTTAAAGGCG+TGG - chr8_2:72471829-72471848 None:intergenic 45.0%
CTATCTGTAGAGATCTCCCA+TGG + chr8_2:72471929-72471948 Msa1267330:intron 45.0%
TACTGAGAGACTCAGTAGCA+GGG - chr8_2:72471959-72471978 None:intergenic 45.0%
ATACTGAGAGACTCAGTAGC+AGG - chr8_2:72471960-72471979 None:intergenic 45.0%
! GATTCACTTGTTGGGTGTGA+GGG - chr8_2:72472463-72472482 None:intergenic 45.0%
! TGATTCACTTGTTGGGTGTG+AGG - chr8_2:72472464-72472483 None:intergenic 45.0%
CCGACACTTGATTCACTTGT+TGG - chr8_2:72472472-72472491 None:intergenic 45.0%
!! ACAAGTGAATCAAGTGTCGG+TGG + chr8_2:72472472-72472491 Msa1267330:intron 45.0%
GAAAACGCCACAATCTGTCA+TGG + chr8_2:72472499-72472518 Msa1267330:intron 45.0%
AGATCTTCCAGCATCCACAA+TGG + chr8_2:72472631-72472650 Msa1267330:intron 45.0%
CGGGAACAATCATCTCATCA+TGG - chr8_2:72473182-72473201 None:intergenic 45.0%
TTCCACATGTCGTTATACGC+GGG - chr8_2:72473201-72473220 None:intergenic 45.0%
GTTCCACATGTCGTTATACG+CGG - chr8_2:72473202-72473221 None:intergenic 45.0%
CCCTGACGAAAAACTGTTGT+TGG + chr8_2:72473285-72473304 Msa1267330:intron 45.0%
TTCACGATGACAAGGAAGGA+AGG - chr8_2:72473516-72473535 None:intergenic 45.0%
CTTCTTCACGATGACAAGGA+AGG - chr8_2:72473520-72473539 None:intergenic 45.0%
GTCTCTTCTTCACGATGACA+AGG - chr8_2:72473524-72473543 None:intergenic 45.0%
GGGTTGTTGTGTGAAGACAA+TGG + chr8_2:72474165-72474184 Msa1267330:intron 45.0%
GTGGGTGATTGATTGTGCTT+AGG + chr8_2:72474706-72474725 Msa1267330:intron 45.0%
!! ATAAATTAAATAAATAAGTA+AGG - chr8_2:72469713-72469732 None:intergenic 5.0%
!!! CTTCTTGCTGCTGCTTTTGG+AGG - chr8_2:72469563-72469582 None:intergenic 50.0%
GAGGAAGCGAAGGTTCTGTT+TGG - chr8_2:72469671-72469690 None:intergenic 50.0%
AGTTGAAGGTCTTGGAGTGC+TGG - chr8_2:72469811-72469830 None:intergenic 50.0%
GTGTAGTAGAGGGAGGTTGT+TGG - chr8_2:72469903-72469922 None:intergenic 50.0%
CTACACAAATCAGCTGGGTC+TGG + chr8_2:72469917-72469936 Msa1267330:CDS 50.0%
ACACAAATCAGCTGGGTCTG+GGG + chr8_2:72469919-72469938 Msa1267330:CDS 50.0%
GTCTGGATTCCCCAATCACA+AGG + chr8_2:72470136-72470155 Msa1267330:CDS 50.0%
AAGTGACGACCCAGACTTTG+GGG - chr8_2:72470363-72470382 None:intergenic 50.0%
GAAGTGACGACCCAGACTTT+GGG - chr8_2:72470364-72470383 None:intergenic 50.0%
AGAAGTGACGACCCAGACTT+TGG - chr8_2:72470365-72470384 None:intergenic 50.0%
!! GTTTTCAGGGGGCCTTTGTT+TGG + chr8_2:72470640-72470659 Msa1267330:intron 50.0%
TGCCTTGCTGCTCCAAACAA+AGG - chr8_2:72470655-72470674 None:intergenic 50.0%
! TGTTTGGAGCAGCAAGGCAT+TGG + chr8_2:72470656-72470675 Msa1267330:CDS 50.0%
CTATTGCTTGAACCAGGGCT+AGG - chr8_2:72471478-72471497 None:intergenic 50.0%
CTAGCCCTGGTTCAAGCAAT+AGG + chr8_2:72471476-72471495 Msa1267330:intron 50.0%
TGCTTCATGCCCTATGCCAA+TGG - chr8_2:72471898-72471917 None:intergenic 50.0%
TCAGTAGCAGGGCATACCAT+GGG - chr8_2:72471948-72471967 None:intergenic 50.0%
GATGCAATGGGTACGTAGCT+TGG - chr8_2:72472159-72472178 None:intergenic 50.0%
!! TGAATCAAGTGTCGGTGGTG+AGG + chr8_2:72472477-72472496 Msa1267330:intron 50.0%
CAAATGAGGGAGCTCCATTG+TGG - chr8_2:72472648-72472667 None:intergenic 50.0%
CACAATGGAGCTCCCTCATT+TGG + chr8_2:72472646-72472665 Msa1267330:intron 50.0%
ATATCCCTTGAACCCATCGG+CGG + chr8_2:72472876-72472895 Msa1267330:intron 50.0%
!! GTCTTCTAGAATCCGCCGAT+GGG - chr8_2:72472891-72472910 None:intergenic 50.0%
!! AGTCTTCTAGAATCCGCCGA+TGG - chr8_2:72472892-72472911 None:intergenic 50.0%
TTCCCGCGTATAACGACATG+TGG + chr8_2:72473196-72473215 Msa1267330:intron 50.0%
ATTGAAATCCTGGACCCTCG+TGG + chr8_2:72473962-72473981 Msa1267330:intron 50.0%
! GGTTGGTTCAAGAGACTAGG+TGG + chr8_2:72474007-72474026 Msa1267330:intron 50.0%
!!! AGTTTTTTGGTCGGGTGTGC+AGG + chr8_2:72474313-72474332 Msa1267330:intron 50.0%
!! TGGATGCTCTGAAGAACCTG+AGG + chr8_2:72474992-72475011 Msa1267330:CDS 50.0%
! CAGCGATTTTGCATTCCCAC+AGG - chr8_2:72475346-72475365 None:intergenic 50.0%
!!! CTTGCTGCTGCTTTTGGAGG+AGG - chr8_2:72469560-72469579 None:intergenic 55.0%
GGAGGAGTTGGAGTTGGAGT+TGG - chr8_2:72469631-72469650 None:intergenic 55.0%
GGCCGAGAAAGAGGATCTTG+CGG + chr8_2:72469851-72469870 Msa1267330:CDS 55.0%
CACAAATCAGCTGGGTCTGG+GGG + chr8_2:72469920-72469939 Msa1267330:CDS 55.0%
ACAAATCAGCTGGGTCTGGG+GGG + chr8_2:72469921-72469940 Msa1267330:CDS 55.0%
AGGATGGTTGCCCCAAAGTC+TGG + chr8_2:72470350-72470369 Msa1267330:CDS 55.0%
GGATGGTTGCCCCAAAGTCT+GGG + chr8_2:72470351-72470370 Msa1267330:CDS 55.0%
! GGCCTTTGTTTGGAGCAGCA+AGG + chr8_2:72470650-72470669 Msa1267330:CDS 55.0%
!! CAGCAAGGCATTGGTAACCG+AGG + chr8_2:72470665-72470684 Msa1267330:CDS 55.0%
TAGAGAAACCCACCTAGCCC+TGG + chr8_2:72471463-72471482 Msa1267330:intron 55.0%
TGCTTGAACCAGGGCTAGGT+GGG - chr8_2:72471474-72471493 None:intergenic 55.0%
TTGCTTGAACCAGGGCTAGG+TGG - chr8_2:72471475-72471494 None:intergenic 55.0%
CTCAGTAGCAGGGCATACCA+TGG - chr8_2:72471949-72471968 None:intergenic 55.0%
CTTGTTGGGTGTGAGGGTCA+AGG - chr8_2:72472457-72472476 None:intergenic 55.0%
! GAATCCGCCGATGGGTTCAA+GGG - chr8_2:72472883-72472902 None:intergenic 55.0%
! AGAATCCGCCGATGGGTTCA+AGG - chr8_2:72472884-72472903 None:intergenic 55.0%
GTTAACATCCACGAGGGTCC+AGG - chr8_2:72473973-72473992 None:intergenic 55.0%
!! GCTTTTGGAGGAGGAGGAGG+AGG - chr8_2:72469551-72469570 None:intergenic 60.0%
!!! GCTGCTTTTGGAGGAGGAGG+AGG - chr8_2:72469554-72469573 None:intergenic 60.0%
!!! GCTGCTGCTTTTGGAGGAGG+AGG - chr8_2:72469557-72469576 None:intergenic 60.0%
TGGGTGTGAGGGTCAAGGTG+TGG - chr8_2:72472452-72472471 None:intergenic 60.0%
GGGAGCTCCATTGTGGATGC+TGG - chr8_2:72472641-72472660 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 72469299 72475404 72469299 ID=Msa1267330;Name=Msa1267330
chr8_2 mRNA 72469299 72475404 72469299 ID=Msa1267330-mRNA-1;Parent=Msa1267330;Name=Msa1267330-mRNA-1;_AED=0.04;_eAED=0.04;_QI=113|1|1|1|1|1|6|360|334
chr8_2 exon 72469299 72469702 72469299 ID=Msa1267330-mRNA-1:exon:24469;Parent=Msa1267330-mRNA-1
chr8_2 exon 72469789 72470226 72469789 ID=Msa1267330-mRNA-1:exon:24470;Parent=Msa1267330-mRNA-1
chr8_2 exon 72470334 72470417 72470334 ID=Msa1267330-mRNA-1:exon:24471;Parent=Msa1267330-mRNA-1
chr8_2 exon 72470648 72470686 72470648 ID=Msa1267330-mRNA-1:exon:24472;Parent=Msa1267330-mRNA-1
chr8_2 exon 72470932 72470978 72470932 ID=Msa1267330-mRNA-1:exon:24473;Parent=Msa1267330-mRNA-1
chr8_2 exon 72474939 72475404 72474939 ID=Msa1267330-mRNA-1:exon:24474;Parent=Msa1267330-mRNA-1
chr8_2 five_prime_UTR 72469299 72469411 72469299 ID=Msa1267330-mRNA-1:five_prime_utr;Parent=Msa1267330-mRNA-1
chr8_2 CDS 72469412 72469702 72469412 ID=Msa1267330-mRNA-1:cds;Parent=Msa1267330-mRNA-1
chr8_2 CDS 72469789 72470226 72469789 ID=Msa1267330-mRNA-1:cds;Parent=Msa1267330-mRNA-1
chr8_2 CDS 72470334 72470417 72470334 ID=Msa1267330-mRNA-1:cds;Parent=Msa1267330-mRNA-1
chr8_2 CDS 72470648 72470686 72470648 ID=Msa1267330-mRNA-1:cds;Parent=Msa1267330-mRNA-1
chr8_2 CDS 72470932 72470978 72470932 ID=Msa1267330-mRNA-1:cds;Parent=Msa1267330-mRNA-1
chr8_2 CDS 72474939 72475044 72474939 ID=Msa1267330-mRNA-1:cds;Parent=Msa1267330-mRNA-1
chr8_2 three_prime_UTR 72475045 72475404 72475045 ID=Msa1267330-mRNA-1:three_prime_utr;Parent=Msa1267330-mRNA-1
Gene Sequence

>Msa1267330

ATGAAGATGAAACTGAAATTCGTTCCATTATCATCATCTTGTTCGTTAGCAGCTGCTGCAGTACTGTGTGATTCCAATTCCAATTACAATTACAATAAGAAGAAGAGACACAGCAGTATGAATATGATAGTATACTCCTCCTCCTCCTCCTCCAAAAGCAGCAGCAAGAAGAATGATTCTTCTAATTCTAATTCTAATTCTAATTCTAATTCTCAACCAACTCCAACTCCAACTCCTCCTAGAATCACTTCTAACGCCAAACAGAACCTTCGCTTCCTCAAGATATGGAAGGAGTACCAAAAACGAAAATCCAGCACTCCAAGACCTTCAACTAGTTACCGTAAAAAGAAGAAGGCCGAGAAAGAGGATCTTGCGGATGACCAAACTGACCTCTATCGTGATCCAACAACCTCCCTCTACTACACAAATCAGCTGGGTCTGGGGGGTTTAATTGACAATGCTGCTGCTGTCCCTGTTTTGCTTGTTGATGGTTACAATGTCTGTGGATATTGGATGAAACTCAAAAAACATTTTCTCAATGGCAAACTTGAACTTGCTCGCCAGAAGCTTATTGACGAACTTATCACCTTTAGTATGCTTAGAGAGGTCAAAGTCGTTGTTGTATTTGATGCCATGATGTCTGGATTCCCCAATCACAAGGAATATTCTTCCGGCATCGACATTGTTTTCTCAACTGATGCATCTGCTGATACATGGATTGAAAAAGAGGTTTCAGCTTTAAAGGAGGATGGTTGCCCCAAAGTCTGGGTCGTCACTTCTGATCACTGTCAACAACAAGCAGCACATGGAGCAGGGGCCTTTGTTTGGAGCAGCAAGGCATTGGTAACCGAGATCAAGGCATCACAAAAGGAGGTTGAAGAGATGCTTCAAGAGCAAAGATCCACTTCTTTTCAAGGTAGATTGTTGAAGCACAATCTTGATGCAGAAGTAGTGGATGCTCTGAAGAACCTGAGGCAAAAGTTATCTGATAATGAGTTGAAGTAA

Protein sequence

>Msa1267330

MKMKLKFVPLSSSCSLAAAAVLCDSNSNYNYNKKKRHSSMNMIVYSSSSSSKSSSKKNDSSNSNSNSNSNSQPTPTPTPPRITSNAKQNLRFLKIWKEYQKRKSSTPRPSTSYRKKKKAEKEDLADDQTDLYRDPTTSLYYTNQLGLGGLIDNAAAVPVLLVDGYNVCGYWMKLKKHFLNGKLELARQKLIDELITFSMLREVKVVVVFDAMMSGFPNHKEYSSGIDIVFSTDASADTWIEKEVSALKEDGCPKVWVVTSDHCQQQAAHGAGAFVWSSKALVTEIKASQKEVEEMLQEQRSTSFQGRLLKHNLDAEVVDALKNLRQKLSDNELK*