Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615840 | XP_013457364.1 | 98.780 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1011 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615840 | sp|O64765|UAP2_ARATH | 78.685 | 502 | 97 | 3 | 1 | 492 | 1 | 502 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615840 | B7FLD4 | 98.780 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1011 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0089980 | Msa0615840 | 0.817094 | 3.940625e-52 | -8.615850e-47 |
| Msa0090010 | Msa0615840 | 0.820783 | 5.714944e-53 | -8.615850e-47 |
| Msa0615840 | Msa0626270 | 0.824739 | 6.856002e-54 | -8.615850e-47 |
| Msa0615840 | Msa0626460 | 0.807500 | 4.904859e-50 | -8.615850e-47 |
| Msa0615840 | Msa0664540 | 0.807647 | 4.564000e-50 | -8.615850e-47 |
| Msa0615840 | Msa0693330 | 0.800020 | 1.753255e-48 | -8.615850e-47 |
| Msa0615840 | Msa0698100 | 0.822584 | 2.190669e-53 | -8.615850e-47 |
| Msa0615840 | Msa0698910 | 0.903112 | 4.852814e-79 | -8.615850e-47 |
| Msa0615840 | Msa0702410 | 0.808149 | 3.568339e-50 | -8.615850e-47 |
| Msa0615840 | Msa0702720 | 0.859951 | 2.898734e-63 | -8.615850e-47 |
| Msa0615840 | Msa1076560 | 0.803071 | 4.151807e-49 | -8.615850e-47 |
| Msa0615840 | Msa1341840 | 0.826752 | 2.283528e-54 | -8.615850e-47 |
| Msa0615840 | Msa1371520 | 0.839041 | 2.008029e-57 | -8.615850e-47 |
| Msa0615840 | Msa1393820 | 0.827703 | 1.351669e-54 | -8.615850e-47 |
| Msa0615840 | Msa1412000 | 0.811804 | 5.827642e-51 | -8.615850e-47 |
| Msa0615840 | Msa1418240 | 0.851434 | 8.895365e-61 | -8.615850e-47 |
| Msa0615840 | Msa1459460 | 0.815279 | 1.002750e-51 | -8.615850e-47 |
| Msa0615840 | Msa1461370 | 0.852718 | 3.841326e-61 | -8.615850e-47 |
| Msa0138360 | Msa0615840 | 0.828051 | 1.114209e-54 | -8.615850e-47 |
| Msa0141400 | Msa0615840 | 0.805119 | 1.556752e-49 | -8.615850e-47 |
| Msa0147980 | Msa0615840 | 0.815215 | 1.036255e-51 | -8.615850e-47 |
| Msa0225480 | Msa0615840 | 0.806186 | 9.295915e-50 | -8.615850e-47 |
| Msa0417970 | Msa0615840 | 0.804642 | 1.958709e-49 | -8.615850e-47 |
| Msa0279850 | Msa0615840 | 0.810714 | 1.004909e-50 | -8.615850e-47 |
| Msa0285770 | Msa0615840 | 0.800028 | 1.746276e-48 | -8.615850e-47 |
| Msa0305310 | Msa0615840 | 0.801133 | 1.039483e-48 | -8.615850e-47 |
| Msa0322900 | Msa0615840 | 0.808505 | 2.997343e-50 | -8.615850e-47 |
| Msa0485240 | Msa0615840 | 0.834366 | 3.124051e-56 | -8.615850e-47 |
| Msa0527190 | Msa0615840 | 0.831198 | 1.912814e-55 | -8.615850e-47 |
| Msa0572750 | Msa0615840 | 0.803686 | 3.096763e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615840 | MtrunA17_Chr4g0052421 | 98.780 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1011 |
| Msa0615840 | MtrunA17_Chr3g0125301 | 25.000 | 464 | 306 | 15 | 18 | 448 | 13 | 467 | 2.31e-19 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615840 | AT2G35020.1 | 78.685 | 502 | 97 | 3 | 1 | 492 | 1 | 502 | 0.0 | 840 |
| Msa0615840 | AT1G31070.2 | 80.922 | 477 | 91 | 0 | 16 | 492 | 29 | 505 | 0.0 | 839 |
| Msa0615840 | AT1G31070.1 | 78.310 | 355 | 77 | 0 | 16 | 370 | 29 | 383 | 0.0 | 604 |
| Msa0615840 | AT5G52560.1 | 25.662 | 491 | 304 | 18 | 18 | 464 | 24 | 497 | 6.12e-17 | 84.3 |
Find 146 sgRNAs with CRISPR-Local
Find 565 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAATACTCTTATGTAATTT+TGG | 0.033810 | 4_2:+65391232 | Msa0615840:five_prime_UTR |
| CAAGGATGGGAGAATTATTT+TGG | 0.147043 | 4_2:+65395026 | Msa0615840:CDS |
| TTTGAAAGTCATAAATATTT+TGG | 0.186163 | 4_2:+65394853 | Msa0615840:CDS |
| GGCCATATCCTCTAATAATT+TGG | 0.227671 | 4_2:-65395986 | None:intergenic |
| TCGAATAATCCGGTCAATTC+TGG | 0.235387 | 4_2:-65391860 | None:intergenic |
| GAACTTACCTGTTGCATATA+AGG | 0.259745 | 4_2:-65399343 | None:intergenic |
| TACTCGCTCCCTGAGGAAAT+TGG | 0.262271 | 4_2:+65399878 | Msa0615840:three_prime_UTR |
| ACGAGAAAGATGGTGGAAAA+TGG | 0.265448 | 4_2:+65392071 | Msa0615840:CDS |
| TACCAAATTATTAGAGGATA+TGG | 0.284629 | 4_2:+65395984 | Msa0615840:CDS |
| GATGGTCCCTTGCCGGAAAA+AGG | 0.298612 | 4_2:-65394992 | None:intergenic |
| ATAGGTTACTTCATTGATAA+AGG | 0.304008 | 4_2:+65396190 | Msa0615840:CDS |
| TCTTTCTTTCTCACTCTTGT+TGG | 0.305246 | 4_2:-65391374 | None:intergenic |
| TTTCAAGGCCATTTGCTACT+TGG | 0.311354 | 4_2:-65398569 | None:intergenic |
| ACTATCTGGAGTGTCATAAT+TGG | 0.320421 | 4_2:-65399247 | None:intergenic |
| ATTCTACACGGGCAAGTAAA+TGG | 0.320647 | 4_2:-65399795 | None:intergenic |
| TACTCACTGAAACATCCTTT+TGG | 0.337696 | 4_2:-65393955 | None:intergenic |
| GAGTGTTGTTGGTGTTAAAT+TGG | 0.342158 | 4_2:-65391507 | None:intergenic |
| GGTAATGGTGGAGTGTATTC+AGG | 0.359451 | 4_2:+65395862 | Msa0615840:CDS |
| TATTGCAGGTTCTGCTTCTT+CGG | 0.366673 | 4_2:+65394771 | Msa0615840:intron |
| TAATGAGACCTTACCCTATA+CGG | 0.373627 | 4_2:-65395054 | None:intergenic |
| GAAGTCTACCAAATTATTAG+AGG | 0.383185 | 4_2:+65395978 | Msa0615840:CDS |
| CTGCTTACACATGTTTACTT+TGG | 0.391711 | 4_2:+65398536 | Msa0615840:CDS |
| TTTGTTAGATAGAGTGTTGT+TGG | 0.392469 | 4_2:-65391518 | None:intergenic |
| GGTGTTAAATTGGTTGATTA+TGG | 0.392693 | 4_2:-65391497 | None:intergenic |
| CACACGGGATGGTCCCTTGC+CGG | 0.399509 | 4_2:-65394999 | None:intergenic |
| TTCCTCGACATATAGGTTCC+AGG | 0.401488 | 4_2:-65399492 | None:intergenic |
| CAAAATAATTCTCCCATCCT+TGG | 0.405946 | 4_2:-65395025 | None:intergenic |
| CGAGAAAGATGGTGGAAAAT+GGG | 0.406431 | 4_2:+65392072 | Msa0615840:CDS |
| ACCGGCAGCTGCCATTGAAC+CGG | 0.406794 | 4_2:+65392002 | Msa0615840:CDS |
| AAGTATGTTCTGGAAATATC+AGG | 0.416461 | 4_2:-65399838 | None:intergenic |
| AATTGGTTGATTATGGTGAC+AGG | 0.419908 | 4_2:-65391490 | None:intergenic |
| TCAGTTCCCTTATATGCAAC+AGG | 0.422972 | 4_2:+65399336 | Msa0615840:CDS |
| AGTGCAGTTGTAGGAGCATA+AGG | 0.429772 | 4_2:-65399065 | None:intergenic |
| AATATATCTTCAGAAATGTA+TGG | 0.431746 | 4_2:-65399602 | None:intergenic |
| TTAGAGAAGTTGAGGAAGGA+AGG | 0.433281 | 4_2:+65391422 | Msa0615840:five_prime_UTR |
| TCGAGGAGTGCTTGAGGTGG+CGG | 0.439218 | 4_2:-65391648 | None:intergenic |
| CTGTATTCAACCACGGTAAG+AGG | 0.440686 | 4_2:-65397549 | None:intergenic |
| CGCGTTGCCTCATCAGTGAA+TGG | 0.441491 | 4_2:-65394823 | None:intergenic |
| TTCATATGCGGGTGAAAACC+TGG | 0.442088 | 4_2:+65399474 | Msa0615840:CDS |
| ATTGACAGTGAAGTATGTTC+TGG | 0.447998 | 4_2:-65399848 | None:intergenic |
| AACTTACCTGTTGCATATAA+GGG | 0.449853 | 4_2:-65399342 | None:intergenic |
| AAGAAAATCCCTTCCATACA+TGG | 0.452058 | 4_2:+65398996 | Msa0615840:CDS |
| CGAGAAAATCGCGTTCCTCA+TGG | 0.453099 | 4_2:-65391725 | None:intergenic |
| TCGCAACAAGCCGCACAAAC+AGG | 0.455180 | 4_2:-65399556 | None:intergenic |
| GAGAAAGAAAGAGGAGTAGG+AGG | 0.455780 | 4_2:+65391385 | Msa0615840:five_prime_UTR |
| TTTCTAAACCAAGTAGCAAA+TGG | 0.458960 | 4_2:+65398561 | Msa0615840:CDS |
| AATGTTCTTCCTCGACATAT+AGG | 0.462309 | 4_2:-65399499 | None:intergenic |
| GAAACATTGCTCTCCGGCAC+CGG | 0.464910 | 4_2:-65392021 | None:intergenic |
| AGCTGCCATTGAACCGGTGC+CGG | 0.468596 | 4_2:+65392008 | Msa0615840:CDS |
| GAGAAGTTGAGGAAGGAAGG+AGG | 0.468872 | 4_2:+65391425 | Msa0615840:five_prime_UTR |
| TCCCATTGTATATCCATGTA+TGG | 0.471065 | 4_2:-65399009 | None:intergenic |
| ATGAAGTAACCTATAAAAGA+TGG | 0.472169 | 4_2:-65396181 | None:intergenic |
| AACTATAAATGCAGGGGACT+AGG | 0.472760 | 4_2:+65393917 | Msa0615840:intron |
| ACCTTTGAAACATTGCTCTC+CGG | 0.473215 | 4_2:-65392027 | None:intergenic |
| CTAGATATTGGACTACCATC+TGG | 0.473335 | 4_2:+65394606 | Msa0615840:intron |
| ATGGTGGAAAATGGGATTGA+AGG | 0.475887 | 4_2:+65392080 | Msa0615840:CDS |
| ATCCCGTGTGTTTCCAAGGA+TGG | 0.478780 | 4_2:+65395012 | Msa0615840:CDS |
| AGAAGTTGAGGAAGGAAGGA+GGG | 0.482541 | 4_2:+65391426 | Msa0615840:five_prime_UTR |
| TAAATGCAGGGGACTAGGCT+TGG | 0.484181 | 4_2:+65393922 | Msa0615840:intron |
| GAGAAAATCGCGTTCCTCAT+GGG | 0.487827 | 4_2:-65391724 | None:intergenic |
| TCCATACATGGATATACAAT+GGG | 0.488414 | 4_2:+65399008 | Msa0615840:CDS |
| GTGTTTGTACAGAGAGGTAA+AGG | 0.491156 | 4_2:+65397522 | Msa0615840:CDS |
| AGAAAGAAAGAGGAGTAGGA+GGG | 0.491547 | 4_2:+65391386 | Msa0615840:five_prime_UTR |
| GTCATTAGAGAAGTTGAGGA+AGG | 0.491874 | 4_2:+65391418 | Msa0615840:five_prime_UTR |
| AGTGAGAAAGAAAGAGGAGT+AGG | 0.495762 | 4_2:+65391382 | Msa0615840:five_prime_UTR |
| TTGATTGGGAACACATTTGT+CGG | 0.496191 | 4_2:-65391276 | None:intergenic |
| GCTCTCCGGCACCGGTTCAA+TGG | 0.497742 | 4_2:-65392013 | None:intergenic |
| ATCAAGTATATTGATTGCTA+TGG | 0.500758 | 4_2:+65396018 | Msa0615840:CDS |
| ACCGGTTCAATGGCAGCTGC+CGG | 0.508607 | 4_2:-65392003 | None:intergenic |
| GAAAGAAAGAGGAGTAGGAG+GGG | 0.509083 | 4_2:+65391387 | Msa0615840:five_prime_UTR |
| TTAGAGGATATGGCCTCAAA+AGG | 0.510060 | 4_2:+65395994 | Msa0615840:CDS |
| AGTAGCAAATGGCCTTGAAA+AGG | 0.513757 | 4_2:+65398572 | Msa0615840:CDS |
| TTTGGTCATTAGAGAAGTTG+AGG | 0.514332 | 4_2:+65391414 | Msa0615840:five_prime_UTR |
| TAGATCTTTCCAGAATTGAC+CGG | 0.518035 | 4_2:+65391851 | Msa0615840:CDS |
| ACAGGCATACCCGCAAGAAA+AGG | 0.518790 | 4_2:+65397494 | Msa0615840:intron |
| CGATGTTCATTACGATCTCA+AGG | 0.519314 | 4_2:+65391880 | Msa0615840:CDS |
| AAAGAAAGAGGAGTAGGAGG+GGG | 0.519324 | 4_2:+65391388 | Msa0615840:five_prime_UTR |
| GCTTGTTGCGATTGCAGTGA+GGG | 0.520178 | 4_2:+65399568 | Msa0615840:three_prime_UTR |
| GCAAAAGCTCCTGACGGTAA+TGG | 0.523813 | 4_2:+65395847 | Msa0615840:CDS |
| AGAGATGAGAGAACCCTCTT+CGG | 0.524428 | 4_2:+65391590 | Msa0615840:exon |
| TCTGGAAATATCAGGAAAAG+TGG | 0.525699 | 4_2:-65399830 | None:intergenic |
| AACAAGAGTGAGAAAGAAAG+AGG | 0.526899 | 4_2:+65391376 | Msa0615840:five_prime_UTR |
| GACCATCCCGTGTGTTTCCA+AGG | 0.530328 | 4_2:+65395008 | Msa0615840:CDS |
| TCCCGTGTGTTTCCAAGGAT+GGG | 0.532512 | 4_2:+65395013 | Msa0615840:CDS |
| ACTCGATGGGTAGTTGCTGC+AGG | 0.532793 | 4_2:+65399297 | Msa0615840:CDS |
| GTTTCGATAATCGCCGAAGA+GGG | 0.534852 | 4_2:-65391603 | None:intergenic |
| ATTGTATATCCATGTATGGA+AGG | 0.539674 | 4_2:-65399005 | None:intergenic |
| TTCCATACATGGATATACAA+TGG | 0.543786 | 4_2:+65399007 | Msa0615840:CDS |
| ATATATCTTCAGAAATGTAT+GGG | 0.554312 | 4_2:-65399601 | None:intergenic |
| AGTTGAGGAAGGAAGGAGGG+TGG | 0.557140 | 4_2:+65391429 | Msa0615840:five_prime_UTR |
| TACACTCCACCATTACCGTC+AGG | 0.562309 | 4_2:-65395856 | None:intergenic |
| CTCCCATCCTTGGAAACACA+CGG | 0.565274 | 4_2:-65395015 | None:intergenic |
| TCTGCAGTTAATCAAACTAC+TGG | 0.566305 | 4_2:+65397594 | Msa0615840:CDS |
| TCACCACTCTGTTCATATGC+GGG | 0.569834 | 4_2:+65399463 | Msa0615840:CDS |
| TGAAGAAACGCTGCCACCGT+TGG | 0.575020 | 4_2:-65391625 | None:intergenic |
| GTCAAGAGGAACGAGAAAGA+TGG | 0.575219 | 4_2:+65392061 | Msa0615840:CDS |
| AGTCTCTCGAGGAGTGCTTG+AGG | 0.577150 | 4_2:-65391654 | None:intergenic |
| CTAGTTCTATCCTGTTTGTG+CGG | 0.578364 | 4_2:+65399546 | Msa0615840:exon |
| GCCGGAGAGCAATGTTTCAA+AGG | 0.578522 | 4_2:+65392026 | Msa0615840:CDS |
| TTGGTTGATTATGGTGACAG+GGG | 0.579916 | 4_2:-65391488 | None:intergenic |
| CTCTCGAGGAGTGCTTGAGG+TGG | 0.585890 | 4_2:-65391651 | None:intergenic |
| CTTGGAAGTTCAGATCCAAA+AGG | 0.586032 | 4_2:+65393940 | Msa0615840:CDS |
| GTAATGAACATCGAATAATC+CGG | 0.587802 | 4_2:-65391870 | None:intergenic |
| GTTGGAGTGTTTGTACAGAG+AGG | 0.589395 | 4_2:+65397516 | Msa0615840:CDS |
| GCATACCCGCAAGAAAAGGT+TGG | 0.589665 | 4_2:+65397498 | Msa0615840:CDS |
| GGTGGAAGAGCGAAGTCAAG+AGG | 0.590587 | 4_2:+65392047 | Msa0615840:CDS |
| CGTGGTTGAATACAGCGAGT+TGG | 0.590831 | 4_2:+65397557 | Msa0615840:CDS |
| ATCCTTGGAAACACACGGGA+TGG | 0.592302 | 4_2:-65395010 | None:intergenic |
| ATTGGTTGATTATGGTGACA+GGG | 0.598199 | 4_2:-65391489 | None:intergenic |
| TTGTATATCCATGTATGGAA+GGG | 0.599916 | 4_2:-65399004 | None:intergenic |
| CTGCATATTTGATTCTACAC+GGG | 0.601590 | 4_2:-65399806 | None:intergenic |
| GGATTGAAGGCTATTTCAGA+CGG | 0.604854 | 4_2:+65392093 | Msa0615840:CDS |
| GAGACTCAAAGACTACGGTC+AGG | 0.607450 | 4_2:+65391671 | Msa0615840:CDS |
| CGATGGGTAGTTGCTGCAGG+TGG | 0.608013 | 4_2:+65399300 | Msa0615840:CDS |
| GTCACCACTCTGTTCATATG+CGG | 0.608923 | 4_2:+65399462 | Msa0615840:CDS |
| CTCGAGAGACTCAAAGACTA+CGG | 0.609406 | 4_2:+65391666 | Msa0615840:CDS |
| TGCAGCAAAAGTCGTCCGCA+AGG | 0.613796 | 4_2:+65396222 | Msa0615840:CDS |
| ACTGCATATTTGATTCTACA+CGG | 0.614608 | 4_2:-65399807 | None:intergenic |
| CTTCTTCGGTGCAAATACAC+TGG | 0.618237 | 4_2:+65394785 | Msa0615840:CDS |
| AAGAGGAACGAGAAAGATGG+TGG | 0.619187 | 4_2:+65392064 | Msa0615840:CDS |
| TTAACTGCAGAAGCTAGTGA+TGG | 0.623952 | 4_2:-65397582 | None:intergenic |
| AAGATAGAGTACCTGACCAC+CGG | 0.624987 | 4_2:-65392139 | None:intergenic |
| TAAAGGTGGTCCTCTTACCG+TGG | 0.625495 | 4_2:+65397539 | Msa0615840:CDS |
| AAAGCTCCTGACGGTAATGG+TGG | 0.625943 | 4_2:+65395850 | Msa0615840:CDS |
| GGAGAGCAATGTTTCAAAGG+TGG | 0.629080 | 4_2:+65392029 | Msa0615840:CDS |
| CTATGGAGTTGACAATGCAC+TGG | 0.631889 | 4_2:+65396035 | Msa0615840:CDS |
| AACCTGGAACCTATATGTCG+AGG | 0.633244 | 4_2:+65399490 | Msa0615840:CDS |
| TAACTGCAGAAGCTAGTGAT+GGG | 0.636411 | 4_2:-65397581 | None:intergenic |
| CGTAGTCTTTGAGTCTCTCG+AGG | 0.637723 | 4_2:-65391665 | None:intergenic |
| GACTAGTCCATTCACTGATG+AGG | 0.637967 | 4_2:+65394816 | Msa0615840:CDS |
| GGTTTCGATAATCGCCGAAG+AGG | 0.639225 | 4_2:-65391604 | None:intergenic |
| TGGTTGATTATGGTGACAGG+GGG | 0.654224 | 4_2:-65391487 | None:intergenic |
| TCGGCGATTATCGAAACCAA+CGG | 0.657041 | 4_2:+65391609 | Msa0615840:CDS |
| CAGGTAGCAAAAGCTCCTGA+CGG | 0.660570 | 4_2:+65395841 | Msa0615840:intron |
| TCCCATCCTTGGAAACACAC+GGG | 0.660844 | 4_2:-65395014 | None:intergenic |
| AACTAGAAAGTAATCTCACA+AGG | 0.664854 | 4_2:-65399529 | None:intergenic |
| CCATGTTCAGGTATTACGCG+AGG | 0.673609 | 4_2:+65399191 | Msa0615840:intron |
| GGCTTGTTGCGATTGCAGTG+AGG | 0.674438 | 4_2:+65399567 | Msa0615840:three_prime_UTR |
| TTTGTACAGAGAGGTAAAGG+TGG | 0.695572 | 4_2:+65397525 | Msa0615840:CDS |
| TGTTCAGGTATTACGCGAGG+AGG | 0.698338 | 4_2:+65399194 | Msa0615840:intron |
| CTGGGATGAACTCTCCCATG+AGG | 0.700644 | 4_2:+65391710 | Msa0615840:CDS |
| TGATACATGTGAATGATGAG+AGG | 0.700721 | 4_2:-65399632 | None:intergenic |
| CAACTCGCTGTATTCAACCA+CGG | 0.702119 | 4_2:-65397556 | None:intergenic |
| GCGATTATCGAAACCAACGG+TGG | 0.747436 | 4_2:+65391612 | Msa0615840:CDS |
| TCACCCGCATATGAACAGAG+TGG | 0.756584 | 4_2:-65399466 | None:intergenic |
| AGTATTATACTCGCTCCCTG+AGG | 0.763191 | 4_2:+65399871 | Msa0615840:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAATATTATTATTCGT+TGG | + | chr4_2:65392267-65392286 | Msa0615840:intron | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | + | chr4_2:65393441-65393460 | Msa0615840:intron | 10.0% |
| !!! | ATAAGTAAATTTTTTTTTGT+AGG | + | chr4_2:65393502-65393521 | Msa0615840:intron | 10.0% |
| !!! | TAAGTAAATTTTTTTTTGTA+GGG | + | chr4_2:65393503-65393522 | Msa0615840:intron | 10.0% |
| !! | AAAGTTATTAAAATTAAGTA+AGG | + | chr4_2:65393532-65393551 | Msa0615840:intron | 10.0% |
| !! | AAAACATATATAATCTAATT+TGG | + | chr4_2:65395664-65395683 | Msa0615840:intron | 10.0% |
| !! | ATCATATATATTGTAATAAA+GGG | - | chr4_2:65395900-65395919 | None:intergenic | 10.0% |
| !! | TATCATATATATTGTAATAA+AGG | - | chr4_2:65395901-65395920 | None:intergenic | 10.0% |
| !! | TATTACAATATATATGATAT+TGG | + | chr4_2:65395902-65395921 | Msa0615840:intron | 10.0% |
| !!! | AAAAAGTTTTCATTTTTTTA+GGG | - | chr4_2:65397318-65397337 | None:intergenic | 10.0% |
| !!! | AAAAAAGTTTTCATTTTTTT+AGG | - | chr4_2:65397319-65397338 | None:intergenic | 10.0% |
| !!! | AAAAAAATGAAAACTTTTTT+TGG | + | chr4_2:65397319-65397338 | Msa0615840:intron | 10.0% |
| !! | TAACAATAGTATTAAAAAAA+GGG | - | chr4_2:65398367-65398386 | None:intergenic | 10.0% |
| !! | TTAACAATAGTATTAAAAAA+AGG | - | chr4_2:65398368-65398387 | None:intergenic | 10.0% |
| !!! | CAATATAAAATTACTTTTTA+GGG | - | chr4_2:65398858-65398877 | None:intergenic | 10.0% |
| !!! | ATTATACAATTTTTGTTGTT+TGG | - | chr4_2:65392818-65392837 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr4_2:65393119-65393138 | None:intergenic | 15.0% |
| !!! | GTTTTTCAACAATTTTTTAT+AGG | + | chr4_2:65393221-65393240 | Msa0615840:intron | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | - | chr4_2:65393275-65393294 | None:intergenic | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | - | chr4_2:65393310-65393329 | None:intergenic | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | + | chr4_2:65393469-65393488 | Msa0615840:intron | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | + | chr4_2:65393470-65393489 | Msa0615840:intron | 15.0% |
| !!! | ATTTTTTACAGTAAAAACTA+GGG | - | chr4_2:65393606-65393625 | None:intergenic | 15.0% |
| !!! | AATTTTTTACAGTAAAAACT+AGG | - | chr4_2:65393607-65393626 | None:intergenic | 15.0% |
| !! | ATTTGAAAATTTCTTATACT+AGG | + | chr4_2:65394317-65394336 | Msa0615840:intron | 15.0% |
| !!! | TTTGAAAGTCATAAATATTT+TGG | + | chr4_2:65394853-65394872 | Msa0615840:CDS | 15.0% |
| !! | TAATGATAAGAAAACATATT+TGG | - | chr4_2:65395096-65395115 | None:intergenic | 15.0% |
| !! | TAACGAATATGATTAAAAAA+AGG | + | chr4_2:65395420-65395439 | Msa0615840:intron | 15.0% |
| !! | TCAAAATAATTGGAAAAAAT+GGG | - | chr4_2:65395637-65395656 | None:intergenic | 15.0% |
| !! | ATTCAATTATTTAGGAAATT+GGG | + | chr4_2:65397122-65397141 | Msa0615840:intron | 15.0% |
| !!! | TTTTAGTTTTATCGAATAAA+TGG | - | chr4_2:65397183-65397202 | None:intergenic | 15.0% |
| !! | ATTAAACTTGAACTAATTAA+TGG | - | chr4_2:65397220-65397239 | None:intergenic | 15.0% |
| !!! | CTTATTAAAATTTTGATTTC+AGG | + | chr4_2:65398512-65398531 | Msa0615840:intron | 15.0% |
| !! | TAAATTAATTTCTTAACATG+TGG | - | chr4_2:65398650-65398669 | None:intergenic | 15.0% |
| !!! | GCAATATAAAATTACTTTTT+AGG | - | chr4_2:65398859-65398878 | None:intergenic | 15.0% |
| !! | TTCTAATGAAATATGTATAA+GGG | - | chr4_2:65399370-65399389 | None:intergenic | 15.0% |
| !! | TTTCTAATGAAATATGTATA+AGG | - | chr4_2:65399371-65399390 | None:intergenic | 15.0% |
| !! | AAATTGGAAAAAAAATGATT+CGG | + | chr4_2:65399894-65399913 | Msa0615840:three_prime_UTR | 15.0% |
| !!! | ATCGAATACTTTTTTTTTTG+TGG | + | chr4_2:65391197-65391216 | Msa0615840:five_prime_UTR | 20.0% |
| !!! | GAATACTCTTATGTAATTTT+GGG | + | chr4_2:65391233-65391252 | Msa0615840:five_prime_UTR | 20.0% |
| !!! | TTTTCGTATATGTATGTATT+CGG | + | chr4_2:65391307-65391326 | Msa0615840:intron | 20.0% |
| !! | AAATAGAATTGCAAATCTAA+TGG | - | chr4_2:65391780-65391799 | None:intergenic | 20.0% |
| !!! | TACACTTTTTGTTTCATTTT+GGG | + | chr4_2:65392482-65392501 | Msa0615840:intron | 20.0% |
| !!! | AGATAATGTCTTTAGTTTTT+AGG | + | chr4_2:65393044-65393063 | Msa0615840:intron | 20.0% |
| !!! | GATAATGTCTTTAGTTTTTA+GGG | + | chr4_2:65393045-65393064 | Msa0615840:intron | 20.0% |
| !!! | TTTAGGGTTAATTATGTTTT+TGG | + | chr4_2:65393061-65393080 | Msa0615840:intron | 20.0% |
| !! | TAATTATAGTTCATGATATG+GGG | - | chr4_2:65393646-65393665 | None:intergenic | 20.0% |
| !! | CTAATTATAGTTCATGATAT+GGG | - | chr4_2:65393647-65393666 | None:intergenic | 20.0% |
| !! | TCTAATTATAGTTCATGATA+TGG | - | chr4_2:65393648-65393667 | None:intergenic | 20.0% |
| !!! | TTTCTAAAAACTATAAATGC+AGG | + | chr4_2:65393909-65393928 | Msa0615840:intron | 20.0% |
| !!! | TTCTAAAAACTATAAATGCA+GGG | + | chr4_2:65393910-65393929 | Msa0615840:intron | 20.0% |
| !!! | GTAGAAAAGAATTTTATCTA+TGG | - | chr4_2:65394160-65394179 | None:intergenic | 20.0% |
| !!! | CCAATATCTAGAATAAAATA+TGG | - | chr4_2:65394597-65394616 | None:intergenic | 20.0% |
| !!! | CCATATTTTATTCTAGATAT+TGG | + | chr4_2:65394594-65394613 | Msa0615840:intron | 20.0% |
| !! | TAAACGTTCTAATCAAATAA+AGG | + | chr4_2:65395152-65395171 | Msa0615840:intron | 20.0% |
| !! | AAACGTTCTAATCAAATAAA+GGG | + | chr4_2:65395153-65395172 | Msa0615840:intron | 20.0% |
| !! | TCTATAACTTGAAATGATTA+GGG | + | chr4_2:65395482-65395501 | Msa0615840:intron | 20.0% |
| !! | CTCAAAATAATTGGAAAAAA+TGG | - | chr4_2:65395638-65395657 | None:intergenic | 20.0% |
| !! | TTTACATGACTCAAAATAAT+TGG | - | chr4_2:65395647-65395666 | None:intergenic | 20.0% |
| !! | TCATAAAATATACAATTGGA+CGG | - | chr4_2:65395773-65395792 | None:intergenic | 20.0% |
| !!! | TATTTTAAACTTTTGAAACC+AGG | + | chr4_2:65395822-65395841 | Msa0615840:intron | 20.0% |
| !! | ACAATATATATGATATTGGT+TGG | + | chr4_2:65395906-65395925 | Msa0615840:intron | 20.0% |
| !!! | CAATATATATGATATTGGTT+GGG | + | chr4_2:65395907-65395926 | Msa0615840:intron | 20.0% |
| !!! | AATATATATGATATTGGTTG+GGG | + | chr4_2:65395908-65395927 | Msa0615840:intron | 20.0% |
| !! | TACTTCTTTAAATAAGAAGT+AGG | - | chr4_2:65396124-65396143 | None:intergenic | 20.0% |
| !!! | TATTTAAAGAAGTATTGACT+TGG | + | chr4_2:65396130-65396149 | Msa0615840:intron | 20.0% |
| !! | AACTTAAACTAACAAACAAA+GGG | - | chr4_2:65396427-65396446 | None:intergenic | 20.0% |
| !! | TAACTTAAACTAACAAACAA+AGG | - | chr4_2:65396428-65396447 | None:intergenic | 20.0% |
| !!! | TAGTTTAAGTTATGAACTTA+TGG | + | chr4_2:65396436-65396455 | Msa0615840:intron | 20.0% |
| !! | ACTATTAATTTACCAACATT+TGG | + | chr4_2:65396765-65396784 | Msa0615840:intron | 20.0% |
| !! | GTAATAAACATTGAATTGTT+TGG | - | chr4_2:65396838-65396857 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAGTGGAGTAAA+AGG | - | chr4_2:65396888-65396907 | None:intergenic | 20.0% |
| !! | TATAATCTACGGAAATATTT+AGG | - | chr4_2:65396972-65396991 | None:intergenic | 20.0% |
| !! | GATTCAATTATTTAGGAAAT+TGG | + | chr4_2:65397121-65397140 | Msa0615840:intron | 20.0% |
| !! | AATAAATCAGAAAAGTAAAC+TGG | + | chr4_2:65397146-65397165 | Msa0615840:intron | 20.0% |
| !! | TTCGATAAAACTAAAACATA+AGG | + | chr4_2:65397187-65397206 | Msa0615840:intron | 20.0% |
| !! | TCGATAAAACTAAAACATAA+GGG | + | chr4_2:65397188-65397207 | Msa0615840:intron | 20.0% |
| !!! | TTTTGTTGACAATTGTTATT+TGG | + | chr4_2:65397361-65397380 | Msa0615840:intron | 20.0% |
| !!! | GTTTTAGTCTCTATAATATT+TGG | + | chr4_2:65397383-65397402 | Msa0615840:intron | 20.0% |
| !!! | ATCTCTTTCTATTTATGTTT+TGG | - | chr4_2:65398080-65398099 | None:intergenic | 20.0% |
| !!! | ATTGGTGCTTTTTTTTTTTA+AGG | + | chr4_2:65398172-65398191 | Msa0615840:intron | 20.0% |
| !!! | TTGGTGCTTTTTTTTTTTAA+GGG | + | chr4_2:65398173-65398192 | Msa0615840:intron | 20.0% |
| !! | TCATAAATAGTTACCATTTA+TGG | + | chr4_2:65398304-65398323 | Msa0615840:intron | 20.0% |
| !!! | CAAAATTTTAATAAGACATC+TGG | - | chr4_2:65398507-65398526 | None:intergenic | 20.0% |
| !!! | TTTATTTTTCAGCTTGAATT+TGG | - | chr4_2:65398712-65398731 | None:intergenic | 20.0% |
| !! | ACATAGTTTCATGTAATAAT+CGG | - | chr4_2:65399110-65399129 | None:intergenic | 20.0% |
| !! | ATATATCTTCAGAAATGTAT+GGG | - | chr4_2:65399604-65399623 | None:intergenic | 20.0% |
| !! | AATATATCTTCAGAAATGTA+TGG | - | chr4_2:65399605-65399624 | None:intergenic | 20.0% |
| !! | CGAATACTCTTATGTAATTT+TGG | + | chr4_2:65391232-65391251 | Msa0615840:five_prime_UTR | 25.0% |
| ! | TTTATTACTAGTACACTAAC+AGG | + | chr4_2:65392362-65392381 | Msa0615840:intron | 25.0% |
| ! | TTATTACTAGTACACTAACA+GGG | + | chr4_2:65392363-65392382 | Msa0615840:intron | 25.0% |
| !! | TTCTTTTTCCTCTTTTAGAT+AGG | + | chr4_2:65392440-65392459 | Msa0615840:intron | 25.0% |
| ! | AAATAATGCCTATCTAAAAG+AGG | - | chr4_2:65392451-65392470 | None:intergenic | 25.0% |
| !!! | CTACACTTTTTGTTTCATTT+TGG | + | chr4_2:65392481-65392500 | Msa0615840:intron | 25.0% |
| !! | TAGTTAATCTCTCTTTTACA+AGG | - | chr4_2:65393005-65393024 | None:intergenic | 25.0% |
| ! | AAACAAATTTCGATTGAGTA+AGG | - | chr4_2:65393180-65393199 | None:intergenic | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | + | chr4_2:65393245-65393264 | Msa0615840:intron | 25.0% |
| !! | AATTATGACTAATTTTGCAG+AGG | + | chr4_2:65393735-65393754 | Msa0615840:intron | 25.0% |
| !! | ATTATGACTAATTTTGCAGA+GGG | + | chr4_2:65393736-65393755 | Msa0615840:intron | 25.0% |
| ! | ATAATTTCCAAAACTGAAGA+TGG | - | chr4_2:65393813-65393832 | None:intergenic | 25.0% |
| !!! | ATCTTCAGTTTTGGAAATTA+TGG | + | chr4_2:65393812-65393831 | Msa0615840:intron | 25.0% |
| ! | ATAATTTCCAAAACTGAAGA+TGG | - | chr4_2:65393813-65393832 | None:intergenic | 25.0% |
| !!! | ATCTTCAGTTTTGGAAATTA+TGG | + | chr4_2:65393812-65393831 | Msa0615840:intron | 25.0% |
| ! | TCTAAAAACTATAAATGCAG+GGG | + | chr4_2:65393911-65393930 | Msa0615840:intron | 25.0% |
| ! | ACAAATTTCAAGCATATTAG+AGG | - | chr4_2:65394388-65394407 | None:intergenic | 25.0% |
| ! | GTCAAATTTAGCATAAACTT+GGG | - | chr4_2:65394426-65394445 | None:intergenic | 25.0% |
| ! | AGTCAAATTTAGCATAAACT+TGG | - | chr4_2:65394427-65394446 | None:intergenic | 25.0% |
| !!! | TTTGCTAATTTGCTTACATT+AGG | + | chr4_2:65394945-65394964 | Msa0615840:intron | 25.0% |
| !!! | GGCTCACTTTTTTAATATAT+AGG | + | chr4_2:65394966-65394985 | Msa0615840:intron | 25.0% |
| !! | ATATATAGGTTACCTTTTTC+CGG | + | chr4_2:65394980-65394999 | Msa0615840:intron | 25.0% |
| ! | ATCTATAGCTACCAATAATT+AGG | - | chr4_2:65395219-65395238 | None:intergenic | 25.0% |
| ! | ATAGATATGAACTCTCTATA+AGG | + | chr4_2:65395233-65395252 | Msa0615840:intron | 25.0% |
| ! | ACTACTGACATAAAATCAAA+TGG | + | chr4_2:65395297-65395316 | Msa0615840:intron | 25.0% |
| !!! | TTTAGAAATTTGCTTTTGTC+AGG | + | chr4_2:65395443-65395462 | Msa0615840:intron | 25.0% |
| ! | GTCTATAACTTGAAATGATT+AGG | + | chr4_2:65395481-65395500 | Msa0615840:intron | 25.0% |
| ! | CTGATTCAGACATTAATAAT+AGG | + | chr4_2:65395566-65395585 | Msa0615840:intron | 25.0% |
| ! | AGGGTCATAAAATATACAAT+TGG | - | chr4_2:65395777-65395796 | None:intergenic | 25.0% |
| ! | TACCAAATTATTAGAGGATA+TGG | + | chr4_2:65395984-65396003 | Msa0615840:CDS | 25.0% |
| !! | AATATACTTGATTCCTTTTG+AGG | - | chr4_2:65396010-65396029 | None:intergenic | 25.0% |
| !! | ATCAAGTATATTGATTGCTA+TGG | + | chr4_2:65396018-65396037 | Msa0615840:CDS | 25.0% |
| !! | ATTGATTCAACAATCAAAAG+AGG | - | chr4_2:65396083-65396102 | None:intergenic | 25.0% |
| !! | GTTGAATCAATCTGTTTTAT+TGG | + | chr4_2:65396092-65396111 | Msa0615840:intron | 25.0% |
| ! | ATGAAGTAACCTATAAAAGA+TGG | - | chr4_2:65396184-65396203 | None:intergenic | 25.0% |
| ! | ATAGGTTACTTCATTGATAA+AGG | + | chr4_2:65396190-65396209 | Msa0615840:CDS | 25.0% |
| ! | AACAAATCAAATATGCGTTT+AGG | + | chr4_2:65396273-65396292 | Msa0615840:intron | 25.0% |
| ! | CACTATATCTGTATATGAAA+AGG | - | chr4_2:65396595-65396614 | None:intergenic | 25.0% |
| ! | TCTATATAATAGCCAAATGT+TGG | - | chr4_2:65396780-65396799 | None:intergenic | 25.0% |
| ! | AAACATTGAATTGTTTGGAA+GGG | - | chr4_2:65396833-65396852 | None:intergenic | 25.0% |
| ! | TAAACATTGAATTGTTTGGA+AGG | - | chr4_2:65396834-65396853 | None:intergenic | 25.0% |
| ! | GGGATCAAAATTATAATCTA+CGG | - | chr4_2:65396983-65397002 | None:intergenic | 25.0% |
| ! | CTGTAATAAAATAGAACTCA+AGG | + | chr4_2:65397099-65397118 | Msa0615840:intron | 25.0% |
| ! | ACTCAAGGATTCAATTATTT+AGG | + | chr4_2:65397114-65397133 | Msa0615840:intron | 25.0% |
| ! | TAATAAGTATAAACTACGAG+AGG | - | chr4_2:65397458-65397477 | None:intergenic | 25.0% |
| !!! | TAATTTAGTCTTGATATGAC+AGG | + | chr4_2:65397476-65397495 | Msa0615840:intron | 25.0% |
| ! | AATCTCGTACAAAAAAAGTT+TGG | - | chr4_2:65397688-65397707 | None:intergenic | 25.0% |
| !!! | CTTTTTTTGTACGAGATTTA+AGG | + | chr4_2:65397690-65397709 | Msa0615840:intron | 25.0% |
| ! | TCTTATAAAATGGAAAGGTA+GGG | + | chr4_2:65397739-65397758 | Msa0615840:intron | 25.0% |
| !!! | ATAGTTTCTAATTTGCTAAC+TGG | - | chr4_2:65397874-65397893 | None:intergenic | 25.0% |
| ! | AGTTAGCAAATTAGAAACTA+TGG | + | chr4_2:65397873-65397892 | Msa0615840:intron | 25.0% |
| ! | GTTAGCAAATTAGAAACTAT+GGG | + | chr4_2:65397874-65397893 | Msa0615840:intron | 25.0% |
| ! | TTATGGCCTATAAGTTATTA+AGG | - | chr4_2:65398039-65398058 | None:intergenic | 25.0% |
| ! | AACATAAATAGAAAGAGATC+AGG | + | chr4_2:65398081-65398100 | Msa0615840:intron | 25.0% |
| ! | TCAGTAATCATGTATAAGAA+TGG | + | chr4_2:65398391-65398410 | Msa0615840:intron | 25.0% |
| ! | CAGTAATCATGTATAAGAAT+GGG | + | chr4_2:65398392-65398411 | Msa0615840:intron | 25.0% |
| ! | ATTTCTTAACATGTGGAATT+CGG | - | chr4_2:65398643-65398662 | None:intergenic | 25.0% |
| !!! | TTTTCCAATCTGTTTTTGAT+TGG | + | chr4_2:65399676-65399695 | Msa0615840:three_prime_UTR | 25.0% |
| !!! | TTGATTGGCTTTTTTGTTTT+TGG | + | chr4_2:65399691-65399710 | Msa0615840:three_prime_UTR | 25.0% |
| !!! | TTTTTTTTCCAATTTCCTCA+GGG | - | chr4_2:65399889-65399908 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTCCAATTTCCTC+AGG | - | chr4_2:65399890-65399909 | None:intergenic | 25.0% |
| ! | CGAAAATAACAGAGTTGATT+GGG | - | chr4_2:65391293-65391312 | None:intergenic | 30.0% |
| ! | ACGAAAATAACAGAGTTGAT+TGG | - | chr4_2:65391294-65391313 | None:intergenic | 30.0% |
| GGTGTTAAATTGGTTGATTA+TGG | - | chr4_2:65391500-65391519 | None:intergenic | 30.0% | |
| !! | TTTGTTAGATAGAGTGTTGT+TGG | - | chr4_2:65391521-65391540 | None:intergenic | 30.0% |
| AGAATTGCAAATCTAATGGT+AGG | - | chr4_2:65391776-65391795 | None:intergenic | 30.0% | |
| GTAATGAACATCGAATAATC+CGG | - | chr4_2:65391873-65391892 | None:intergenic | 30.0% | |
| GGAAAAACAAATCATCAATG+GGG | - | chr4_2:65391974-65391993 | None:intergenic | 30.0% | |
| GGGAAAAACAAATCATCAAT+GGG | - | chr4_2:65391975-65391994 | None:intergenic | 30.0% | |
| CATGTGTTAATCTTGTTCAT+CGG | - | chr4_2:65392177-65392196 | None:intergenic | 30.0% | |
| ! | ATTCATGCAATGATGCTTTT+TGG | + | chr4_2:65392315-65392334 | Msa0615840:intron | 30.0% |
| TATTACTAGTACACTAACAG+GGG | + | chr4_2:65392364-65392383 | Msa0615840:intron | 30.0% | |
| ! | AGAATTCTAACTTGTCTCTA+TGG | - | chr4_2:65392520-65392539 | None:intergenic | 30.0% |
| ATAGAGACAAGTTAGAATTC+TGG | + | chr4_2:65392519-65392538 | Msa0615840:intron | 30.0% | |
| ! | GATAAAGTTGCTTTATGCTA+TGG | + | chr4_2:65392723-65392742 | Msa0615840:intron | 30.0% |
| ! | TGTTGTTTGGTTAAAAACCA+AGG | - | chr4_2:65392774-65392793 | None:intergenic | 30.0% |
| !!! | GAGAGGAAATTTTTGTTGTT+TGG | - | chr4_2:65392787-65392806 | None:intergenic | 30.0% |
| TGATGTGGAATGTTTATGAA+TGG | - | chr4_2:65392915-65392934 | None:intergenic | 30.0% | |
| AAATGTGTATTAGCAACTTC+AGG | - | chr4_2:65392967-65392986 | None:intergenic | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | - | chr4_2:65393104-65393123 | None:intergenic | 30.0% | |
| !!! | GAGTGCAGAAATTTTTTGTA+GGG | - | chr4_2:65393148-65393167 | None:intergenic | 30.0% |
| !!! | TGAGTGCAGAAATTTTTTGT+AGG | - | chr4_2:65393149-65393168 | None:intergenic | 30.0% |
| !!! | TTTTGCGATATTTTTTTCGG+AGG | - | chr4_2:65393272-65393291 | None:intergenic | 30.0% |
| ! | CAAGTTTAGAACACTATGAA+AGG | - | chr4_2:65393407-65393426 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTAGA+AGG | + | chr4_2:65393547-65393566 | Msa0615840:intron | 30.0% | |
| ! | TTAGAAGGTCGCAATTTTAT+AGG | + | chr4_2:65393562-65393581 | Msa0615840:intron | 30.0% |
| ! | TAGAAGGTCGCAATTTTATA+GGG | + | chr4_2:65393563-65393582 | Msa0615840:intron | 30.0% |
| ! | TTATGACTAATTTTGCAGAG+GGG | + | chr4_2:65393737-65393756 | Msa0615840:intron | 30.0% |
| ! | ACTCATCATAGAAAGCATAA+AGG | + | chr4_2:65394227-65394246 | Msa0615840:intron | 30.0% |
| AAAGGTAGTTGTTGAATGTT+CGG | + | chr4_2:65394245-65394264 | Msa0615840:intron | 30.0% | |
| TATTTGCACGTAGAAATAGA+AGG | + | chr4_2:65394293-65394312 | Msa0615840:intron | 30.0% | |
| AATTGTATCAAAGTAGCTGA+AGG | + | chr4_2:65394451-65394470 | Msa0615840:intron | 30.0% | |
| ATCACATACATTCACGATAA+AGG | - | chr4_2:65394512-65394531 | None:intergenic | 30.0% | |
| ! | TGAAAAAGTGATTTTCCAGA+TGG | - | chr4_2:65394624-65394643 | None:intergenic | 30.0% |
| AGAGTAAGTTTCATTTGTCT+TGG | + | chr4_2:65394700-65394719 | Msa0615840:intron | 30.0% | |
| AAAATAAAGCATGAATGACC+TGG | - | chr4_2:65394727-65394746 | None:intergenic | 30.0% | |
| !! | ACTTCTGAAGTCCTAATTAT+TGG | + | chr4_2:65395205-65395224 | Msa0615840:intron | 30.0% |
| ATAATTGGAAAAAATGGGTG+AGG | - | chr4_2:65395632-65395651 | None:intergenic | 30.0% | |
| AGACAGACATAAAATAAGAC+AGG | - | chr4_2:65395737-65395756 | None:intergenic | 30.0% | |
| AACCAGACAGAAATCAAATA+GGG | - | chr4_2:65395796-65395815 | None:intergenic | 30.0% | |
| GAAGTCTACCAAATTATTAG+AGG | + | chr4_2:65395978-65395997 | Msa0615840:CDS | 30.0% | |
| TAGCATGAGTGTTAAACAAT+CGG | - | chr4_2:65396251-65396270 | None:intergenic | 30.0% | |
| ! | TGATAGTGAGGAAAAGAATA+AGG | - | chr4_2:65396314-65396333 | None:intergenic | 30.0% |
| AGGGTATATTTGAATTTGAG+AGG | + | chr4_2:65396341-65396360 | Msa0615840:intron | 30.0% | |
| !!! | TCTGCATGAATTGTTTTTTC+TGG | + | chr4_2:65396508-65396527 | Msa0615840:intron | 30.0% |
| TCTTTCTGCAGATTTATAGA+AGG | - | chr4_2:65396626-65396645 | None:intergenic | 30.0% | |
| ! | TAGTTTCCAAATTTTAGACC+AGG | - | chr4_2:65396740-65396759 | None:intergenic | 30.0% |
| CAATTATTGCAAGCATAACT+CGG | + | chr4_2:65397023-65397042 | Msa0615840:intron | 30.0% | |
| AATTATTGCAAGCATAACTC+GGG | + | chr4_2:65397024-65397043 | Msa0615840:intron | 30.0% | |
| CAAAATGAGTCATATTTGCA+AGG | - | chr4_2:65397253-65397272 | None:intergenic | 30.0% | |
| ! | CTTGCAAATATGACTCATTT+TGG | + | chr4_2:65397251-65397270 | Msa0615840:intron | 30.0% |
| !! | AATATGACTCATTTTGGTGT+TGG | + | chr4_2:65397257-65397276 | Msa0615840:intron | 30.0% |
| !! | TTCGACATGGTCTTATAAAA+TGG | + | chr4_2:65397729-65397748 | Msa0615840:intron | 30.0% |
| !! | CATGGTCTTATAAAATGGAA+AGG | + | chr4_2:65397734-65397753 | Msa0615840:intron | 30.0% |
| GTCTTATAAAATGGAAAGGT+AGG | + | chr4_2:65397738-65397757 | Msa0615840:intron | 30.0% | |
| CTTATAAAATGGAAAGGTAG+GGG | + | chr4_2:65397740-65397759 | Msa0615840:intron | 30.0% | |
| TACTAGGTTTCCATTTAACT+AGG | - | chr4_2:65397790-65397809 | None:intergenic | 30.0% | |
| !! | CACAATCAAAAGTTGATACT+AGG | - | chr4_2:65397806-65397825 | None:intergenic | 30.0% |
| AAGCAAATTAGATGATCACA+AGG | - | chr4_2:65397902-65397921 | None:intergenic | 30.0% | |
| TTATCTTACATAATGCCTTC+AGG | + | chr4_2:65397926-65397945 | Msa0615840:intron | 30.0% | |
| ACTTTATGTATAGAACCTGA+AGG | - | chr4_2:65397944-65397963 | None:intergenic | 30.0% | |
| !! | CTGAAACAAACACTACTTTT+AGG | + | chr4_2:65397966-65397985 | Msa0615840:intron | 30.0% |
| ATGCCACCTTAATAACTTAT+AGG | + | chr4_2:65398030-65398049 | Msa0615840:intron | 30.0% | |
| TGACAAAGCAAATTGAGTTA+TGG | - | chr4_2:65398056-65398075 | None:intergenic | 30.0% | |
| !! | ATTAATGGGGTTGGTTAAAT+AGG | - | chr4_2:65398133-65398152 | None:intergenic | 30.0% |
| TATTTAACCAACCCCATTAA+TGG | + | chr4_2:65398132-65398151 | Msa0615840:intron | 30.0% | |
| ATTTAACCAACCCCATTAAT+GGG | + | chr4_2:65398133-65398152 | Msa0615840:intron | 30.0% | |
| AGAGCGTAAAAAAGATATTG+TGG | - | chr4_2:65398432-65398451 | None:intergenic | 30.0% | |
| TTTCTAAACCAAGTAGCAAA+TGG | + | chr4_2:65398561-65398580 | Msa0615840:CDS | 30.0% | |
| TATAAGACACTAAGACTACA+AGG | - | chr4_2:65398688-65398707 | None:intergenic | 30.0% | |
| TTGTATATCCATGTATGGAA+GGG | - | chr4_2:65399007-65399026 | None:intergenic | 30.0% | |
| ATTGTATATCCATGTATGGA+AGG | - | chr4_2:65399008-65399027 | None:intergenic | 30.0% | |
| TTCCATACATGGATATACAA+TGG | + | chr4_2:65399007-65399026 | Msa0615840:CDS | 30.0% | |
| TCCATACATGGATATACAAT+GGG | + | chr4_2:65399008-65399027 | Msa0615840:CDS | 30.0% | |
| !!! | GATCCATTTGCATTTTTTAC+AGG | - | chr4_2:65399228-65399247 | None:intergenic | 30.0% |
| AACTTACCTGTTGCATATAA+GGG | - | chr4_2:65399345-65399364 | None:intergenic | 30.0% | |
| AACTAGAAAGTAATCTCACA+AGG | - | chr4_2:65399532-65399551 | None:intergenic | 30.0% | |
| AAAGCCAATCAAAAACAGAT+TGG | - | chr4_2:65399683-65399702 | None:intergenic | 30.0% | |
| ACTGCATATTTGATTCTACA+CGG | - | chr4_2:65399810-65399829 | None:intergenic | 30.0% | |
| !! | AAGTATGTTCTGGAAATATC+AGG | - | chr4_2:65399841-65399860 | None:intergenic | 30.0% |
| TTGATTGGGAACACATTTGT+CGG | - | chr4_2:65391279-65391298 | None:intergenic | 35.0% | |
| TCTTTCTTTCTCACTCTTGT+TGG | - | chr4_2:65391377-65391396 | None:intergenic | 35.0% | |
| AACAAGAGTGAGAAAGAAAG+AGG | + | chr4_2:65391376-65391395 | Msa0615840:five_prime_UTR | 35.0% | |
| TTTGGTCATTAGAGAAGTTG+AGG | + | chr4_2:65391414-65391433 | Msa0615840:five_prime_UTR | 35.0% | |
| ATTGGTTGATTATGGTGACA+GGG | - | chr4_2:65391492-65391511 | None:intergenic | 35.0% | |
| AATTGGTTGATTATGGTGAC+AGG | - | chr4_2:65391493-65391512 | None:intergenic | 35.0% | |
| !! | GAGTGTTGTTGGTGTTAAAT+TGG | - | chr4_2:65391510-65391529 | None:intergenic | 35.0% |
| TAGATCTTTCCAGAATTGAC+CGG | + | chr4_2:65391851-65391870 | Msa0615840:CDS | 35.0% | |
| GGGGAAAAACAAATCATCAA+TGG | - | chr4_2:65391976-65391995 | None:intergenic | 35.0% | |
| !!! | TTGATGATTTGTTTTTCCCC+AGG | + | chr4_2:65391976-65391995 | Msa0615840:intron | 35.0% |
| !!! | TGATGATTTGTTTTTCCCCA+GGG | + | chr4_2:65391977-65391996 | Msa0615840:intron | 35.0% |
| TCCCTAAAAAGCAACATCAT+TGG | + | chr4_2:65392560-65392579 | Msa0615840:intron | 35.0% | |
| !!! | GCCAATGATGTTGCTTTTTA+GGG | - | chr4_2:65392564-65392583 | None:intergenic | 35.0% |
| !!! | AGCCAATGATGTTGCTTTTT+AGG | - | chr4_2:65392565-65392584 | None:intergenic | 35.0% |
| CTACGTATGATGTAAAGCAT+TGG | + | chr4_2:65392672-65392691 | Msa0615840:intron | 35.0% | |
| AGGAGATAAGAGACAATAGT+CGG | - | chr4_2:65392754-65392773 | None:intergenic | 35.0% | |
| ACTATTGTCTCTTATCTCCT+TGG | + | chr4_2:65392754-65392773 | Msa0615840:intron | 35.0% | |
| !!! | GTTGTTTGGTTTTGTTTGAG+AGG | - | chr4_2:65392804-65392823 | None:intergenic | 35.0% |
| AGATACTACTAGTCATGATG+TGG | - | chr4_2:65392930-65392949 | None:intergenic | 35.0% | |
| ! | TACAAGGTCGCAATTTTGTA+GGG | - | chr4_2:65393088-65393107 | None:intergenic | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+AGG | - | chr4_2:65393089-65393108 | None:intergenic | 35.0% |
| ACTGTAAAAAATTAAGCCCC+TGG | + | chr4_2:65393614-65393633 | Msa0615840:intron | 35.0% | |
| TTATAGTTCATGATATGGGG+AGG | - | chr4_2:65393643-65393662 | None:intergenic | 35.0% | |
| ! | TCTTAGTCCATCTTCAGTTT+TGG | + | chr4_2:65393803-65393822 | Msa0615840:intron | 35.0% |
| ! | ATGGATTTGCTTGAATGACA+TGG | + | chr4_2:65393831-65393850 | Msa0615840:intron | 35.0% |
| ! | TCTTAGTCCATCTTCAGTTT+TGG | + | chr4_2:65393803-65393822 | Msa0615840:intron | 35.0% |
| ! | ATGGATTTGCTTGAATGACA+TGG | + | chr4_2:65393831-65393850 | Msa0615840:intron | 35.0% |
| ! | TACTCACTGAAACATCCTTT+TGG | - | chr4_2:65393958-65393977 | None:intergenic | 35.0% |
| ATAAACTTGGGCAAGACATA+AGG | - | chr4_2:65394414-65394433 | None:intergenic | 35.0% | |
| CATACATTCACGATAAAGGA+CGG | - | chr4_2:65394508-65394527 | None:intergenic | 35.0% | |
| !! | TTTTTCAACTTCAAGCAGAG+AGG | + | chr4_2:65394637-65394656 | Msa0615840:CDS | 35.0% |
| ATCATCTGTTTGTCTATTGC+AGG | + | chr4_2:65394757-65394776 | Msa0615840:intron | 35.0% | |
| CAAAATAATTCTCCCATCCT+TGG | - | chr4_2:65395028-65395047 | None:intergenic | 35.0% | |
| ! | CAAGGATGGGAGAATTATTT+TGG | + | chr4_2:65395026-65395045 | Msa0615840:CDS | 35.0% |
| !!! | TTATTTTGGAGACTCCGTAT+AGG | + | chr4_2:65395040-65395059 | Msa0615840:CDS | 35.0% |
| !! | TATTTTGGAGACTCCGTATA+GGG | + | chr4_2:65395041-65395060 | Msa0615840:CDS | 35.0% |
| TAATGAGACCTTACCCTATA+CGG | - | chr4_2:65395057-65395076 | None:intergenic | 35.0% | |
| !!! | GGTTTTGAGAACAAATAGCA+CGG | + | chr4_2:65395174-65395193 | Msa0615840:intron | 35.0% |
| !!! | GTTTTGAGAACAAATAGCAC+GGG | + | chr4_2:65395175-65395194 | Msa0615840:intron | 35.0% |
| ! | TAATTTGGAATGAGTACCTG+AGG | + | chr4_2:65395679-65395698 | Msa0615840:intron | 35.0% |
| GAATAAAGAATCTCATCCTC+AGG | - | chr4_2:65395698-65395717 | None:intergenic | 35.0% | |
| CAACCAGACAGAAATCAAAT+AGG | - | chr4_2:65395797-65395816 | None:intergenic | 35.0% | |
| GGCCATATCCTCTAATAATT+TGG | - | chr4_2:65395989-65396008 | None:intergenic | 35.0% | |
| ! | GTTGCTGATCCATCTTTTAT+AGG | + | chr4_2:65396172-65396191 | Msa0615840:CDS | 35.0% |
| TTAAACAATCGGTTACCTTG+CGG | - | chr4_2:65396240-65396259 | None:intergenic | 35.0% | |
| TTCCTCACTATCATCTTTGT+AGG | + | chr4_2:65396321-65396340 | Msa0615840:intron | 35.0% | |
| TCCTCACTATCATCTTTGTA+GGG | + | chr4_2:65396322-65396341 | Msa0615840:intron | 35.0% | |
| ! | TTGCACTGATCAGGAAAATA+CGG | - | chr4_2:65396383-65396402 | None:intergenic | 35.0% |
| AACTTATGGTTGTGTGCAAT+TGG | + | chr4_2:65396450-65396469 | Msa0615840:intron | 35.0% | |
| TGCAATTGGATTCTGCAAAT+AGG | + | chr4_2:65396464-65396483 | Msa0615840:intron | 35.0% | |
| !!! | TTTTCTGGAATGCATCCTTT+TGG | + | chr4_2:65396523-65396542 | Msa0615840:intron | 35.0% |
| ATTCAGCGAAGAAAACCAAA+AGG | - | chr4_2:65396541-65396560 | None:intergenic | 35.0% | |
| CATATTAGAATATCGCCAGT+AGG | + | chr4_2:65396663-65396682 | Msa0615840:intron | 35.0% | |
| TGTTGAAGGAGTTTCTAACT+AGG | + | chr4_2:65396710-65396729 | Msa0615840:intron | 35.0% | |
| TATGCTTGCAATAATTGCAG+TGG | - | chr4_2:65397020-65397039 | None:intergenic | 35.0% | |
| ACTCAGGAATCCAATTATTC+AGG | + | chr4_2:65397060-65397079 | Msa0615840:intron | 35.0% | |
| AATCCAATTATTCAGGCAGT+TGG | + | chr4_2:65397067-65397086 | Msa0615840:intron | 35.0% | |
| ATCCAATTATTCAGGCAGTT+GGG | + | chr4_2:65397068-65397087 | Msa0615840:intron | 35.0% | |
| AGAAAAGTAAACTGGATCTC+AGG | + | chr4_2:65397154-65397173 | Msa0615840:intron | 35.0% | |
| GAAAAGTAAACTGGATCTCA+GGG | + | chr4_2:65397155-65397174 | Msa0615840:intron | 35.0% | |
| TCTGCAGTTAATCAAACTAC+TGG | + | chr4_2:65397594-65397613 | Msa0615840:CDS | 35.0% | |
| ATTTCCCTTGAATTTCGACA+TGG | + | chr4_2:65397716-65397735 | Msa0615840:intron | 35.0% | |
| AAGACCATGTCGAAATTCAA+GGG | - | chr4_2:65397723-65397742 | None:intergenic | 35.0% | |
| TAAGACCATGTCGAAATTCA+AGG | - | chr4_2:65397724-65397743 | None:intergenic | 35.0% | |
| CTCTACACTTCCTAGTTAAA+TGG | + | chr4_2:65397777-65397796 | Msa0615840:intron | 35.0% | |
| ATAGAATCAAAGCTCCTGTT+TGG | - | chr4_2:65397841-65397860 | None:intergenic | 35.0% | |
| TGGCCTATAAGTTATTAAGG+TGG | - | chr4_2:65398036-65398055 | None:intergenic | 35.0% | |
| CACTAGTTAAGGACCATAAA+TGG | - | chr4_2:65398320-65398339 | None:intergenic | 35.0% | |
| CTGCTTACACATGTTTACTT+TGG | + | chr4_2:65398536-65398555 | Msa0615840:CDS | 35.0% | |
| TGAGAATTGAGAAGGAAGAT+AGG | - | chr4_2:65398613-65398632 | None:intergenic | 35.0% | |
| GATAACACTGAGAATTGAGA+AGG | - | chr4_2:65398621-65398640 | None:intergenic | 35.0% | |
| AAAAAGTTGTGTTTACCCTC+CGG | + | chr4_2:65398744-65398763 | Msa0615840:intron | 35.0% | |
| !!! | TTACTTTTTAGGGAGAGTCT+GGG | - | chr4_2:65398848-65398867 | None:intergenic | 35.0% |
| !!! | ATTACTTTTTAGGGAGAGTC+TGG | - | chr4_2:65398849-65398868 | None:intergenic | 35.0% |
| !! | CTATAGAATCAATTTGCTGC+AGG | + | chr4_2:65398878-65398897 | Msa0615840:intron | 35.0% |
| GGATCATAAGACTAAGACTA+TGG | - | chr4_2:65398939-65398958 | None:intergenic | 35.0% | |
| CTGCATATAGAATTGATGCA+TGG | - | chr4_2:65398960-65398979 | None:intergenic | 35.0% | |
| AAGAAAATCCCTTCCATACA+TGG | + | chr4_2:65398996-65399015 | Msa0615840:CDS | 35.0% | |
| TCCCATTGTATATCCATGTA+TGG | - | chr4_2:65399012-65399031 | None:intergenic | 35.0% | |
| !!! | TTTTTTCCTGACATGATGCT+TGG | + | chr4_2:65399133-65399152 | Msa0615840:intron | 35.0% |
| ! | ACTATCTGGAGTGTCATAAT+TGG | - | chr4_2:65399250-65399269 | None:intergenic | 35.0% |
| !! | ACAAGCATTTTAGCACTATC+TGG | - | chr4_2:65399264-65399283 | None:intergenic | 35.0% |
| !! | TTTTTCGACTTCATACTCGA+TGG | + | chr4_2:65399283-65399302 | Msa0615840:CDS | 35.0% |
| ! | TTTTCGACTTCATACTCGAT+GGG | + | chr4_2:65399284-65399303 | Msa0615840:CDS | 35.0% |
| GAACTTACCTGTTGCATATA+AGG | - | chr4_2:65399346-65399365 | None:intergenic | 35.0% | |
| AATGTTCTTCCTCGACATAT+AGG | - | chr4_2:65399502-65399521 | None:intergenic | 35.0% | |
| TGATACATGTGAATGATGAG+AGG | - | chr4_2:65399635-65399654 | None:intergenic | 35.0% | |
| CTGCATATTTGATTCTACAC+GGG | - | chr4_2:65399809-65399828 | None:intergenic | 35.0% | |
| TCTGGAAATATCAGGAAAAG+TGG | - | chr4_2:65399833-65399852 | None:intergenic | 35.0% | |
| ATTGACAGTGAAGTATGTTC+TGG | - | chr4_2:65399851-65399870 | None:intergenic | 35.0% | |
| AGTGAGAAAGAAAGAGGAGT+AGG | + | chr4_2:65391382-65391401 | Msa0615840:five_prime_UTR | 40.0% | |
| AGAAAGAAAGAGGAGTAGGA+GGG | + | chr4_2:65391386-65391405 | Msa0615840:five_prime_UTR | 40.0% | |
| GTCATTAGAGAAGTTGAGGA+AGG | + | chr4_2:65391418-65391437 | Msa0615840:five_prime_UTR | 40.0% | |
| TTAGAGAAGTTGAGGAAGGA+AGG | + | chr4_2:65391422-65391441 | Msa0615840:five_prime_UTR | 40.0% | |
| TTGGTTGATTATGGTGACAG+GGG | - | chr4_2:65391491-65391510 | None:intergenic | 40.0% | |
| !!! | AGGAAGACGTTTTTTCTCTC+TGG | + | chr4_2:65391691-65391710 | Msa0615840:CDS | 40.0% |
| !!! | GGAAGACGTTTTTTCTCTCT+GGG | + | chr4_2:65391692-65391711 | Msa0615840:CDS | 40.0% |
| TCGAATAATCCGGTCAATTC+TGG | - | chr4_2:65391863-65391882 | None:intergenic | 40.0% | |
| CGATGTTCATTACGATCTCA+AGG | + | chr4_2:65391880-65391899 | Msa0615840:CDS | 40.0% | |
| !! | ACCTTTGAAACATTGCTCTC+CGG | - | chr4_2:65392030-65392049 | None:intergenic | 40.0% |
| !! | ACGAGAAAGATGGTGGAAAA+TGG | + | chr4_2:65392071-65392090 | Msa0615840:CDS | 40.0% |
| !! | CGAGAAAGATGGTGGAAAAT+GGG | + | chr4_2:65392072-65392091 | Msa0615840:CDS | 40.0% |
| ! | ATGGTGGAAAATGGGATTGA+AGG | + | chr4_2:65392080-65392099 | Msa0615840:CDS | 40.0% |
| ! | GGATTGAAGGCTATTTCAGA+CGG | + | chr4_2:65392093-65392112 | Msa0615840:CDS | 40.0% |
| !! | GTCGCTGTTTTGCTTTTATC+CGG | + | chr4_2:65392120-65392139 | Msa0615840:CDS | 40.0% |
| !! | TGATGTAAAGCATTGGCTCT+TGG | + | chr4_2:65392679-65392698 | Msa0615840:intron | 40.0% |
| GTGTATTAGCAACTTCAGGA+GGG | - | chr4_2:65392963-65392982 | None:intergenic | 40.0% | |
| TGTGTATTAGCAACTTCAGG+AGG | - | chr4_2:65392964-65392983 | None:intergenic | 40.0% | |
| AACTATAAATGCAGGGGACT+AGG | + | chr4_2:65393917-65393936 | Msa0615840:intron | 40.0% | |
| CTTGGAAGTTCAGATCCAAA+AGG | + | chr4_2:65393940-65393959 | Msa0615840:CDS | 40.0% | |
| ! | GCTCAAGTATTTTCACTGCT+AGG | + | chr4_2:65393997-65394016 | Msa0615840:intron | 40.0% |
| TAGTTGTTGAATGTTCGGCA+TGG | + | chr4_2:65394250-65394269 | Msa0615840:intron | 40.0% | |
| ACGGCTTATGCAAATGTCAA+AGG | - | chr4_2:65394489-65394508 | None:intergenic | 40.0% | |
| CTAGATATTGGACTACCATC+TGG | + | chr4_2:65394606-65394625 | Msa0615840:intron | 40.0% | |
| AGTTTCATTTGTCTTGGTCC+AGG | + | chr4_2:65394706-65394725 | Msa0615840:intron | 40.0% | |
| TATTGCAGGTTCTGCTTCTT+CGG | + | chr4_2:65394771-65394790 | Msa0615840:intron | 40.0% | |
| ! | CTTTTGTCATGCTACCAACT+CGG | + | chr4_2:65395350-65395369 | Msa0615840:intron | 40.0% |
| AGTTATAGACGCACGAATGT+TGG | - | chr4_2:65395471-65395490 | None:intergenic | 40.0% | |
| ATTGGAAAAAATGGGTGAGG+CGG | - | chr4_2:65395629-65395648 | None:intergenic | 40.0% | |
| ! | GACCCTATTTGATTTCTGTC+TGG | + | chr4_2:65395791-65395810 | Msa0615840:intron | 40.0% |
| ! | TGATATTGGTTGGGGAAGTT+TGG | + | chr4_2:65395916-65395935 | Msa0615840:intron | 40.0% |
| TTAGAGGATATGGCCTCAAA+AGG | + | chr4_2:65395994-65396013 | Msa0615840:CDS | 40.0% | |
| ! | ACCCTACAAAGATGATAGTG+AGG | - | chr4_2:65396326-65396345 | None:intergenic | 40.0% |
| ! | TGCACTGATCAGGAAAATAC+GGG | - | chr4_2:65396382-65396401 | None:intergenic | 40.0% |
| ! | GTATTTTCCTGATCAGTGCA+AGG | + | chr4_2:65396382-65396401 | Msa0615840:intron | 40.0% |
| ! | TTTCTTTCCTTGCACTGATC+AGG | - | chr4_2:65396392-65396411 | None:intergenic | 40.0% |
| ATTGGATTCTGCAAATAGGC+TGG | + | chr4_2:65396468-65396487 | Msa0615840:intron | 40.0% | |
| TTGGATTCTGCAAATAGGCT+GGG | + | chr4_2:65396469-65396488 | Msa0615840:intron | 40.0% | |
| ! | GGTTTTCTTCGCTGAATGAT+TGG | + | chr4_2:65396544-65396563 | Msa0615840:intron | 40.0% |
| AGTTTCTAACTAGGTTGTCC+TGG | + | chr4_2:65396719-65396738 | Msa0615840:intron | 40.0% | |
| ! | GGTTGTCCTGGTCTAAAATT+TGG | + | chr4_2:65396731-65396750 | Msa0615840:intron | 40.0% |
| CAGTGGTAGGATCATAAGTT+GGG | - | chr4_2:65397003-65397022 | None:intergenic | 40.0% | |
| CTTGCAATAATTGCAGTGGT+AGG | - | chr4_2:65397016-65397035 | None:intergenic | 40.0% | |
| GGGAAAATGAACTAGAACTC+AGG | + | chr4_2:65397044-65397063 | Msa0615840:intron | 40.0% | |
| ! | AACACTCCAACCTTTTCTTG+CGG | - | chr4_2:65397507-65397526 | None:intergenic | 40.0% |
| GTGTTTGTACAGAGAGGTAA+AGG | + | chr4_2:65397522-65397541 | Msa0615840:CDS | 40.0% | |
| TTTGTACAGAGAGGTAAAGG+TGG | + | chr4_2:65397525-65397544 | Msa0615840:CDS | 40.0% | |
| TAACTGCAGAAGCTAGTGAT+GGG | - | chr4_2:65397584-65397603 | None:intergenic | 40.0% | |
| TTAACTGCAGAAGCTAGTGA+TGG | - | chr4_2:65397585-65397604 | None:intergenic | 40.0% | |
| TGCTCCAACAAAAACGAAGA+CGG | - | chr4_2:65397620-65397639 | None:intergenic | 40.0% | |
| TGACATTGTGAGATCCAAAC+AGG | + | chr4_2:65397824-65397843 | Msa0615840:intron | 40.0% | |
| CATCGATGGATAGGAAAAGA+AGG | - | chr4_2:65397992-65398011 | None:intergenic | 40.0% | |
| ! | TCTTTTCCTATCCATCGATG+TGG | + | chr4_2:65397992-65398011 | Msa0615840:intron | 40.0% |
| GATCAGGTTACATGTCTTGA+TGG | + | chr4_2:65398097-65398116 | Msa0615840:intron | 40.0% | |
| CGATCATTGTCCCATTAATG+GGG | - | chr4_2:65398146-65398165 | None:intergenic | 40.0% | |
| CCGATCATTGTCCCATTAAT+GGG | - | chr4_2:65398147-65398166 | None:intergenic | 40.0% | |
| CCCATTAATGGGACAATGAT+CGG | + | chr4_2:65398144-65398163 | Msa0615840:intron | 40.0% | |
| ACCGATCATTGTCCCATTAA+TGG | - | chr4_2:65398148-65398167 | None:intergenic | 40.0% | |
| ! | GGACAATGATCGGTTCTTAT+TGG | + | chr4_2:65398154-65398173 | Msa0615840:intron | 40.0% |
| !! | AAAATGCTTAAAGAGTGCCC+CGG | - | chr4_2:65398217-65398236 | None:intergenic | 40.0% |
| GATGTGTGTACTCAATGCAT+TGG | - | chr4_2:65398283-65398302 | None:intergenic | 40.0% | |
| ! | TTTCAAGGCCATTTGCTACT+TGG | - | chr4_2:65398572-65398591 | None:intergenic | 40.0% |
| ! | AGTAGCAAATGGCCTTGAAA+AGG | + | chr4_2:65398572-65398591 | Msa0615840:CDS | 40.0% |
| ! | CTTACATGCTGTCCTTTTCA+AGG | - | chr4_2:65398587-65398606 | None:intergenic | 40.0% |
| ! | AAGGGATTTTCTTCTCTGCA+AGG | - | chr4_2:65398989-65399008 | None:intergenic | 40.0% |
| !! | TCCTACAACTGCACTTTTTG+AGG | + | chr4_2:65399073-65399092 | Msa0615840:CDS | 40.0% |
| ! | ACCTCAAAAAGTGCAGTTGT+AGG | - | chr4_2:65399077-65399096 | None:intergenic | 40.0% |
| GCGCCTGTAAAAAATGCAAA+TGG | + | chr4_2:65399222-65399241 | Msa0615840:CDS | 40.0% | |
| TCAGTTCCCTTATATGCAAC+AGG | + | chr4_2:65399336-65399355 | Msa0615840:CDS | 40.0% | |
| !! | CTAGTTCTATCCTGTTTGTG+CGG | + | chr4_2:65399546-65399565 | Msa0615840:exon | 40.0% |
| ATTCTACACGGGCAAGTAAA+TGG | - | chr4_2:65399798-65399817 | None:intergenic | 40.0% | |
| GAGAAAGAAAGAGGAGTAGG+AGG | + | chr4_2:65391385-65391404 | Msa0615840:five_prime_UTR | 45.0% | |
| GAAAGAAAGAGGAGTAGGAG+GGG | + | chr4_2:65391387-65391406 | Msa0615840:five_prime_UTR | 45.0% | |
| AAAGAAAGAGGAGTAGGAGG+GGG | + | chr4_2:65391388-65391407 | Msa0615840:five_prime_UTR | 45.0% | |
| AGAAGTTGAGGAAGGAAGGA+GGG | + | chr4_2:65391426-65391445 | Msa0615840:five_prime_UTR | 45.0% | |
| TGGTTGATTATGGTGACAGG+GGG | - | chr4_2:65391490-65391509 | None:intergenic | 45.0% | |
| AGAGATGAGAGAACCCTCTT+CGG | + | chr4_2:65391590-65391609 | Msa0615840:exon | 45.0% | |
| GTTTCGATAATCGCCGAAGA+GGG | - | chr4_2:65391606-65391625 | None:intergenic | 45.0% | |
| TCGGCGATTATCGAAACCAA+CGG | + | chr4_2:65391609-65391628 | Msa0615840:CDS | 45.0% | |
| CTCGAGAGACTCAAAGACTA+CGG | + | chr4_2:65391666-65391685 | Msa0615840:CDS | 45.0% | |
| GAGAAAATCGCGTTCCTCAT+GGG | - | chr4_2:65391727-65391746 | None:intergenic | 45.0% | |
| GGAGAGCAATGTTTCAAAGG+TGG | + | chr4_2:65392029-65392048 | Msa0615840:CDS | 45.0% | |
| GTCAAGAGGAACGAGAAAGA+TGG | + | chr4_2:65392061-65392080 | Msa0615840:CDS | 45.0% | |
| AAGAGGAACGAGAAAGATGG+TGG | + | chr4_2:65392064-65392083 | Msa0615840:CDS | 45.0% | |
| !! | GCTGTTTTGCTTTTATCCGG+TGG | + | chr4_2:65392123-65392142 | Msa0615840:CDS | 45.0% |
| !! | TTTGCTTTTATCCGGTGGTC+AGG | + | chr4_2:65392128-65392147 | Msa0615840:CDS | 45.0% |
| ! | AAGATAGAGTACCTGACCAC+CGG | - | chr4_2:65392142-65392161 | None:intergenic | 45.0% |
| AGACATCCGATGCTTGTTTC+TGG | + | chr4_2:65394133-65394152 | Msa0615840:intron | 45.0% | |
| ! | GACATCCGATGCTTGTTTCT+GGG | + | chr4_2:65394134-65394153 | Msa0615840:intron | 45.0% |
| TATGGCCCAGAAACAAGCAT+CGG | - | chr4_2:65394142-65394161 | None:intergenic | 45.0% | |
| TGTTGAATGTTCGGCATGGA+TGG | + | chr4_2:65394254-65394273 | Msa0615840:intron | 45.0% | |
| GTTGAATGTTCGGCATGGAT+GGG | + | chr4_2:65394255-65394274 | Msa0615840:intron | 45.0% | |
| ! | CTTCTTCGGTGCAAATACAC+TGG | + | chr4_2:65394785-65394804 | Msa0615840:CDS | 45.0% |
| ! | GACTAGTCCATTCACTGATG+AGG | + | chr4_2:65394816-65394835 | Msa0615840:CDS | 45.0% |
| ! | TAGGTTACCTTTTTCCGGCA+AGG | + | chr4_2:65394985-65395004 | Msa0615840:intron | 45.0% |
| ! | AGGTTACCTTTTTCCGGCAA+GGG | + | chr4_2:65394986-65395005 | Msa0615840:intron | 45.0% |
| TGAGAACAAATAGCACGGGA+TGG | + | chr4_2:65395179-65395198 | Msa0615840:intron | 45.0% | |
| GAAATGATTAGGGTCGTGCT+AGG | + | chr4_2:65395492-65395511 | Msa0615840:intron | 45.0% | |
| ! | GGTAATGGTGGAGTGTATTC+AGG | + | chr4_2:65395862-65395881 | Msa0615840:CDS | 45.0% |
| CTATGGAGTTGACAATGCAC+TGG | + | chr4_2:65396035-65396054 | Msa0615840:CDS | 45.0% | |
| !! | TTGACTTGGACTTGTCAACC+AGG | + | chr4_2:65396144-65396163 | Msa0615840:intron | 45.0% |
| ATGGATCAGCAACTCTAACC+TGG | - | chr4_2:65396165-65396184 | None:intergenic | 45.0% | |
| GATCAGGAAAATACGGGTCA+TGG | - | chr4_2:65396376-65396395 | None:intergenic | 45.0% | |
| GGAGACTGTGAATGTAGCAA+TGG | - | chr4_2:65396574-65396593 | None:intergenic | 45.0% | |
| GCAGTGGTAGGATCATAAGT+TGG | - | chr4_2:65397004-65397023 | None:intergenic | 45.0% | |
| TGCCCAACTGCCTGAATAAT+TGG | - | chr4_2:65397073-65397092 | None:intergenic | 45.0% | |
| ! | ACACTCCAACCTTTTCTTGC+GGG | - | chr4_2:65397506-65397525 | None:intergenic | 45.0% |
| ! | GTTGGAGTGTTTGTACAGAG+AGG | + | chr4_2:65397516-65397535 | Msa0615840:CDS | 45.0% |
| CTGTATTCAACCACGGTAAG+AGG | - | chr4_2:65397552-65397571 | None:intergenic | 45.0% | |
| CAACTCGCTGTATTCAACCA+CGG | - | chr4_2:65397559-65397578 | None:intergenic | 45.0% | |
| CATCAACCACATCGATGGAT+AGG | - | chr4_2:65398001-65398020 | None:intergenic | 45.0% | |
| ! | ATCCATCGATGTGGTTGATG+TGG | + | chr4_2:65398001-65398020 | Msa0615840:intron | 45.0% |
| AACCACATCAACCACATCGA+TGG | - | chr4_2:65398006-65398025 | None:intergenic | 45.0% | |
| CATTGTCCCATTAATGGGGT+TGG | - | chr4_2:65398142-65398161 | None:intergenic | 45.0% | |
| !! | AAATGCTTAAAGAGTGCCCC+GGG | - | chr4_2:65398216-65398235 | None:intergenic | 45.0% |
| AGTCTGGGTGGAACAATTCT+TGG | - | chr4_2:65398833-65398852 | None:intergenic | 45.0% | |
| ! | GGATTTTCTTCTCTGCAAGG+TGG | - | chr4_2:65398986-65399005 | None:intergenic | 45.0% |
| ! | AGTGCAGTTGTAGGAGCATA+AGG | - | chr4_2:65399068-65399087 | None:intergenic | 45.0% |
| CCTTAACCAAGCATCATGTC+AGG | - | chr4_2:65399142-65399161 | None:intergenic | 45.0% | |
| CCTGACATGATGCTTGGTTA+AGG | + | chr4_2:65399139-65399158 | Msa0615840:intron | 45.0% | |
| TGAACATGGACGCATGAAAG+AGG | - | chr4_2:65399180-65399199 | None:intergenic | 45.0% | |
| TCTTTCATGCGTCCATGTTC+AGG | + | chr4_2:65399179-65399198 | Msa0615840:intron | 45.0% | |
| TCCTTTCCGTTCATGATACG+TGG | + | chr4_2:65399413-65399432 | Msa0615840:intron | 45.0% | |
| CCTTTCCGTTCATGATACGT+GGG | + | chr4_2:65399414-65399433 | Msa0615840:intron | 45.0% | |
| CACTTCAACACCTGAACAAG+AGG | - | chr4_2:65399443-65399462 | None:intergenic | 45.0% | |
| GTCACCACTCTGTTCATATG+CGG | + | chr4_2:65399462-65399481 | Msa0615840:CDS | 45.0% | |
| TCACCACTCTGTTCATATGC+GGG | + | chr4_2:65399463-65399482 | Msa0615840:CDS | 45.0% | |
| TTCATATGCGGGTGAAAACC+TGG | + | chr4_2:65399474-65399493 | Msa0615840:CDS | 45.0% | |
| AACCTGGAACCTATATGTCG+AGG | + | chr4_2:65399490-65399509 | Msa0615840:CDS | 45.0% | |
| TTCCTCGACATATAGGTTCC+AGG | - | chr4_2:65399495-65399514 | None:intergenic | 45.0% | |
| AGTATTATACTCGCTCCCTG+AGG | + | chr4_2:65399871-65399890 | Msa0615840:three_prime_UTR | 45.0% | |
| !! | ATATATTATATATATATTGA+AGG | - | chr4_2:65392891-65392910 | None:intergenic | 5.0% |
| !! | ATAAAAAATAAAAAAAAAAG+TGG | - | chr4_2:65396897-65396916 | None:intergenic | 5.0% |
| !!! | AGGAGTAGGAGGGGGTATTT+TGG | + | chr4_2:65391396-65391415 | Msa0615840:five_prime_UTR | 50.0% |
| GAGAAGTTGAGGAAGGAAGG+AGG | + | chr4_2:65391425-65391444 | Msa0615840:five_prime_UTR | 50.0% | |
| GGTTTCGATAATCGCCGAAG+AGG | - | chr4_2:65391607-65391626 | None:intergenic | 50.0% | |
| GCGATTATCGAAACCAACGG+TGG | + | chr4_2:65391612-65391631 | Msa0615840:CDS | 50.0% | |
| CGTAGTCTTTGAGTCTCTCG+AGG | - | chr4_2:65391668-65391687 | None:intergenic | 50.0% | |
| GAGACTCAAAGACTACGGTC+AGG | + | chr4_2:65391671-65391690 | Msa0615840:CDS | 50.0% | |
| CGAGAAAATCGCGTTCCTCA+TGG | - | chr4_2:65391728-65391747 | None:intergenic | 50.0% | |
| ! | GGAACGCGATTTTCTCGTCA+AGG | + | chr4_2:65391731-65391750 | Msa0615840:CDS | 50.0% |
| !! | TTGTTTTTCCCCAGGGCTAC+CGG | + | chr4_2:65391984-65392003 | Msa0615840:intron | 50.0% |
| GCCGGAGAGCAATGTTTCAA+AGG | + | chr4_2:65392026-65392045 | Msa0615840:CDS | 50.0% | |
| TAAATGCAGGGGACTAGGCT+TGG | + | chr4_2:65393922-65393941 | Msa0615840:intron | 50.0% | |
| ATCCTTGGAAACACACGGGA+TGG | - | chr4_2:65395013-65395032 | None:intergenic | 50.0% | |
| ATCCCGTGTGTTTCCAAGGA+TGG | + | chr4_2:65395012-65395031 | Msa0615840:CDS | 50.0% | |
| TCCCGTGTGTTTCCAAGGAT+GGG | + | chr4_2:65395013-65395032 | Msa0615840:CDS | 50.0% | |
| TCCCATCCTTGGAAACACAC+GGG | - | chr4_2:65395017-65395036 | None:intergenic | 50.0% | |
| CTCCCATCCTTGGAAACACA+CGG | - | chr4_2:65395018-65395037 | None:intergenic | 50.0% | |
| TGGAGACTCCGTATAGGGTA+AGG | + | chr4_2:65395046-65395065 | Msa0615840:intron | 50.0% | |
| CAGGTAGCAAAAGCTCCTGA+CGG | + | chr4_2:65395841-65395860 | Msa0615840:intron | 50.0% | |
| GCAAAAGCTCCTGACGGTAA+TGG | + | chr4_2:65395847-65395866 | Msa0615840:CDS | 50.0% | |
| ! | AAAGCTCCTGACGGTAATGG+TGG | + | chr4_2:65395850-65395869 | Msa0615840:CDS | 50.0% |
| TACACTCCACCATTACCGTC+AGG | - | chr4_2:65395859-65395878 | None:intergenic | 50.0% | |
| TGCAAATAGGCTGGGAGAGT+TGG | + | chr4_2:65396477-65396496 | Msa0615840:intron | 50.0% | |
| GGTGAGCTGAGAGATGTTGA+AGG | + | chr4_2:65396696-65396715 | Msa0615840:intron | 50.0% | |
| AGTTTCTCACACCCCGATGA+GGG | - | chr4_2:65396945-65396964 | None:intergenic | 50.0% | |
| AAGTTTCTCACACCCCGATG+AGG | - | chr4_2:65396946-65396965 | None:intergenic | 50.0% | |
| ACAGGCATACCCGCAAGAAA+AGG | + | chr4_2:65397494-65397513 | Msa0615840:intron | 50.0% | |
| GCATACCCGCAAGAAAAGGT+TGG | + | chr4_2:65397498-65397517 | Msa0615840:CDS | 50.0% | |
| TAAAGGTGGTCCTCTTACCG+TGG | + | chr4_2:65397539-65397558 | Msa0615840:CDS | 50.0% | |
| CGTGGTTGAATACAGCGAGT+TGG | + | chr4_2:65397557-65397576 | Msa0615840:CDS | 50.0% | |
| !! | CTGGCCGTCTTCGTTTTTGT+TGG | + | chr4_2:65397613-65397632 | Msa0615840:CDS | 50.0% |
| !! | GTTTTGTTAACCAGTGCCCC+CGG | + | chr4_2:65398195-65398214 | Msa0615840:intron | 50.0% |
| ! | TTTTGTTAACCAGTGCCCCC+GGG | + | chr4_2:65398196-65398215 | Msa0615840:intron | 50.0% |
| !! | AATGCTTAAAGAGTGCCCCG+GGG | - | chr4_2:65398215-65398234 | None:intergenic | 50.0% |
| ATGGTCCTTAACTAGTGCCC+CGG | + | chr4_2:65398323-65398342 | Msa0615840:intron | 50.0% | |
| AAACGTTAACTAGTGCCCCC+GGG | - | chr4_2:65398344-65398363 | None:intergenic | 50.0% | |
| GAAACGTTAACTAGTGCCCC+CGG | - | chr4_2:65398345-65398364 | None:intergenic | 50.0% | |
| AAGTTGTGTTTACCCTCCGG+TGG | + | chr4_2:65398747-65398766 | Msa0615840:intron | 50.0% | |
| GGAATGGGACCCTAGGAAAT+CGG | + | chr4_2:65398778-65398797 | Msa0615840:intron | 50.0% | |
| GAATGGGACCCTAGGAAATC+GGG | + | chr4_2:65398779-65398798 | Msa0615840:intron | 50.0% | |
| AATGGGACCCTAGGAAATCG+GGG | + | chr4_2:65398780-65398799 | Msa0615840:intron | 50.0% | |
| GACCAAACCCCGATTTCCTA+GGG | - | chr4_2:65398790-65398809 | None:intergenic | 50.0% | |
| ! | CTAGGAAATCGGGGTTTGGT+CGG | + | chr4_2:65398789-65398808 | Msa0615840:intron | 50.0% |
| ! | TAGGAAATCGGGGTTTGGTC+GGG | + | chr4_2:65398790-65398809 | Msa0615840:intron | 50.0% |
| !! | CTTTTTAGGGAGAGTCTGGG+TGG | - | chr4_2:65398845-65398864 | None:intergenic | 50.0% |
| CCTCGCGTAATACCTGAACA+TGG | - | chr4_2:65399194-65399213 | None:intergenic | 50.0% | |
| CCATGTTCAGGTATTACGCG+AGG | + | chr4_2:65399191-65399210 | Msa0615840:intron | 50.0% | |
| TGTTCAGGTATTACGCGAGG+AGG | + | chr4_2:65399194-65399213 | Msa0615840:intron | 50.0% | |
| CCCACGTATCATGAACGGAA+AGG | - | chr4_2:65399417-65399436 | None:intergenic | 50.0% | |
| GGCAACCCACGTATCATGAA+CGG | - | chr4_2:65399422-65399441 | None:intergenic | 50.0% | |
| TCACCCGCATATGAACAGAG+TGG | - | chr4_2:65399469-65399488 | None:intergenic | 50.0% | |
| ! | GCTTGTTGCGATTGCAGTGA+GGG | + | chr4_2:65399568-65399587 | Msa0615840:three_prime_UTR | 50.0% |
| TACTCGCTCCCTGAGGAAAT+TGG | + | chr4_2:65399878-65399897 | Msa0615840:three_prime_UTR | 50.0% | |
| AGTTGAGGAAGGAAGGAGGG+TGG | + | chr4_2:65391429-65391448 | Msa0615840:five_prime_UTR | 55.0% | |
| TATGGTGACAGGGGGAACAG+TGG | - | chr4_2:65391482-65391501 | None:intergenic | 55.0% | |
| TGAAGAAACGCTGCCACCGT+TGG | - | chr4_2:65391628-65391647 | None:intergenic | 55.0% | |
| !! | AGTCTCTCGAGGAGTGCTTG+AGG | - | chr4_2:65391657-65391676 | None:intergenic | 55.0% |
| CTGGGATGAACTCTCCCATG+AGG | + | chr4_2:65391710-65391729 | Msa0615840:CDS | 55.0% | |
| GAAACATTGCTCTCCGGCAC+CGG | - | chr4_2:65392024-65392043 | None:intergenic | 55.0% | |
| GGTGGAAGAGCGAAGTCAAG+AGG | + | chr4_2:65392047-65392066 | Msa0615840:CDS | 55.0% | |
| ATGATATGGGGAGGCAGCCA+GGG | - | chr4_2:65393634-65393653 | None:intergenic | 55.0% | |
| CGCGTTGCCTCATCAGTGAA+TGG | - | chr4_2:65394826-65394845 | None:intergenic | 55.0% | |
| GATGGTCCCTTGCCGGAAAA+AGG | - | chr4_2:65394995-65395014 | None:intergenic | 55.0% | |
| GACCATCCCGTGTGTTTCCA+AGG | + | chr4_2:65395008-65395027 | Msa0615840:CDS | 55.0% | |
| TGTCATGCTACCAACTCGGC+AGG | + | chr4_2:65395354-65395373 | Msa0615840:intron | 55.0% | |
| GTCATGCTACCAACTCGGCA+GGG | + | chr4_2:65395355-65395374 | Msa0615840:intron | 55.0% | |
| GAATAAGCTCCCTGCCGAGT+TGG | - | chr4_2:65395367-65395386 | None:intergenic | 55.0% | |
| ! | CGTCAGGAGCTTTTGCTACC+TGG | - | chr4_2:65395843-65395862 | None:intergenic | 55.0% |
| TGCAGCAAAAGTCGTCCGCA+AGG | + | chr4_2:65396222-65396241 | Msa0615840:CDS | 55.0% | |
| TGAGGGATGTGAGAGGGGTA+GGG | - | chr4_2:65396928-65396947 | None:intergenic | 55.0% | |
| ATGAGGGATGTGAGAGGGGT+AGG | - | chr4_2:65396929-65396948 | None:intergenic | 55.0% | |
| ACCCCTCTCACATCCCTCAT+CGG | + | chr4_2:65396929-65396948 | Msa0615840:intron | 55.0% | |
| TTTGTTAACCAGTGCCCCCG+GGG | + | chr4_2:65398197-65398216 | Msa0615840:intron | 55.0% | |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | - | chr4_2:65398214-65398233 | None:intergenic | 55.0% |
| TGGTCCTTAACTAGTGCCCC+GGG | + | chr4_2:65398324-65398343 | Msa0615840:intron | 55.0% | |
| AACGTTAACTAGTGCCCCCG+GGG | - | chr4_2:65398343-65398362 | None:intergenic | 55.0% | |
| TTTACCCTCCGGTGGTACCT+AGG | + | chr4_2:65398755-65398774 | Msa0615840:intron | 55.0% | |
| TTACCCTCCGGTGGTACCTA+GGG | + | chr4_2:65398756-65398775 | Msa0615840:intron | 55.0% | |
| GACCCTAGGAAATCGGGGTT+TGG | + | chr4_2:65398785-65398804 | Msa0615840:intron | 55.0% | |
| CGACCAAACCCCGATTTCCT+AGG | - | chr4_2:65398791-65398810 | None:intergenic | 55.0% | |
| ACTCGATGGGTAGTTGCTGC+AGG | + | chr4_2:65399297-65399316 | Msa0615840:CDS | 55.0% | |
| ! | ACGTGGGTTGCCTCTTGTTC+AGG | + | chr4_2:65399430-65399449 | Msa0615840:intron | 55.0% |
| TCGCAACAAGCCGCACAAAC+AGG | - | chr4_2:65399559-65399578 | None:intergenic | 55.0% | |
| !! | GGCTTGTTGCGATTGCAGTG+AGG | + | chr4_2:65399567-65399586 | Msa0615840:three_prime_UTR | 55.0% |
| !! | TCGAGGAGTGCTTGAGGTGG+CGG | - | chr4_2:65391651-65391670 | None:intergenic | 60.0% |
| !! | CTCTCGAGGAGTGCTTGAGG+TGG | - | chr4_2:65391654-65391673 | None:intergenic | 60.0% |
| ACCGGCAGCTGCCATTGAAC+CGG | + | chr4_2:65392002-65392021 | Msa0615840:CDS | 60.0% | |
| ! | ACCGGTTCAATGGCAGCTGC+CGG | - | chr4_2:65392006-65392025 | None:intergenic | 60.0% |
| AGCTGCCATTGAACCGGTGC+CGG | + | chr4_2:65392008-65392027 | Msa0615840:CDS | 60.0% | |
| TGATATGGGGAGGCAGCCAG+GGG | - | chr4_2:65393633-65393652 | None:intergenic | 60.0% | |
| CATGATATGGGGAGGCAGCC+AGG | - | chr4_2:65393635-65393654 | None:intergenic | 60.0% | |
| CCCGATGAGGGATGTGAGAG+GGG | - | chr4_2:65396933-65396952 | None:intergenic | 60.0% | |
| CCCCTCTCACATCCCTCATC+GGG | + | chr4_2:65396930-65396949 | Msa0615840:intron | 60.0% | |
| CCCCGATGAGGGATGTGAGA+GGG | - | chr4_2:65396934-65396953 | None:intergenic | 60.0% | |
| CCCTCTCACATCCCTCATCG+GGG | + | chr4_2:65396931-65396950 | Msa0615840:intron | 60.0% | |
| ACCCCGATGAGGGATGTGAG+AGG | - | chr4_2:65396935-65396954 | None:intergenic | 60.0% | |
| GGTCCTTAACTAGTGCCCCG+GGG | + | chr4_2:65398325-65398344 | Msa0615840:intron | 60.0% | |
| GTCCTTAACTAGTGCCCCGG+GGG | + | chr4_2:65398326-65398345 | Msa0615840:intron | 60.0% | |
| TACCCTCCGGTGGTACCTAG+GGG | + | chr4_2:65398757-65398776 | Msa0615840:intron | 60.0% | |
| TTCCCCTAGGTACCACCGGA+GGG | - | chr4_2:65398762-65398781 | None:intergenic | 60.0% | |
| ATTCCCCTAGGTACCACCGG+AGG | - | chr4_2:65398763-65398782 | None:intergenic | 60.0% | |
| TCCGGTGGTACCTAGGGGAA+TGG | + | chr4_2:65398762-65398781 | Msa0615840:intron | 60.0% | |
| CCCATTCCCCTAGGTACCAC+CGG | - | chr4_2:65398766-65398785 | None:intergenic | 60.0% | |
| CCGGTGGTACCTAGGGGAAT+GGG | + | chr4_2:65398763-65398782 | Msa0615840:intron | 60.0% | |
| ACCTAGGGGAATGGGACCCT+AGG | + | chr4_2:65398771-65398790 | Msa0615840:intron | 60.0% | |
| TCCTAGGGTCCCATTCCCCT+AGG | - | chr4_2:65398775-65398794 | None:intergenic | 60.0% | |
| ! | GAAATCGGGGTTTGGTCGGG+TGG | + | chr4_2:65398793-65398812 | Msa0615840:intron | 60.0% |
| CGATGGGTAGTTGCTGCAGG+TGG | + | chr4_2:65399300-65399319 | Msa0615840:CDS | 60.0% | |
| !! | GCTCTCCGGCACCGGTTCAA+TGG | - | chr4_2:65392016-65392035 | None:intergenic | 65.0% |
| CACACGGGATGGTCCCTTGC+CGG | - | chr4_2:65395002-65395021 | None:intergenic | 65.0% | |
| ! | TGCCCCCGGGGCACTAGTTA+AGG | - | chr4_2:65398331-65398350 | None:intergenic | 65.0% |
| TGGCAGCTGCCGGTAGCCCT+GGG | - | chr4_2:65391996-65392015 | None:intergenic | 70.0% | |
| ATGGCAGCTGCCGGTAGCCC+TGG | - | chr4_2:65391997-65392016 | None:intergenic | 70.0% | |
| !! | AAAGAGTGCCCCGGGGGCAC+TGG | - | chr4_2:65398208-65398227 | None:intergenic | 70.0% |
| GGCAGCTGCCGGTAGCCCTG+GGG | - | chr4_2:65391995-65392014 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 65391189 | 65399922 | 65391189 | ID=Msa0615840;Name=Msa0615840 |
| chr4_2 | mRNA | 65391189 | 65399922 | 65391189 | ID=Msa0615840-mRNA-1;Parent=Msa0615840;Name=Msa0615840-mRNA-1;_AED=0.16;_eAED=0.16;_QI=368|1|1|1|0.93|0.87|16|373|492 |
| chr4_2 | exon | 65391189 | 65391284 | 65391189 | ID=Msa0615840-mRNA-1:exon:18519;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65391322 | 65391761 | 65391322 | ID=Msa0615840-mRNA-1:exon:18520;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65391847 | 65391901 | 65391847 | ID=Msa0615840-mRNA-1:exon:18521;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65391998 | 65392149 | 65391998 | ID=Msa0615840-mRNA-1:exon:18522;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65393931 | 65393970 | 65393931 | ID=Msa0615840-mRNA-1:exon:18523;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65394610 | 65394702 | 65394610 | ID=Msa0615840-mRNA-1:exon:18524;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65394779 | 65394891 | 65394779 | ID=Msa0615840-mRNA-1:exon:18525;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65394988 | 65395062 | 65394988 | ID=Msa0615840-mRNA-1:exon:18526;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65395844 | 65395883 | 65395844 | ID=Msa0615840-mRNA-1:exon:18527;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65395974 | 65396056 | 65395974 | ID=Msa0615840-mRNA-1:exon:18528;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65396166 | 65396243 | 65396166 | ID=Msa0615840-mRNA-1:exon:18529;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65397498 | 65397641 | 65397498 | ID=Msa0615840-mRNA-1:exon:18530;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65398534 | 65398601 | 65398534 | ID=Msa0615840-mRNA-1:exon:18531;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65398980 | 65399094 | 65398980 | ID=Msa0615840-mRNA-1:exon:18532;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65399201 | 65399357 | 65399201 | ID=Msa0615840-mRNA-1:exon:18533;Parent=Msa0615840-mRNA-1 |
| chr4_2 | exon | 65399452 | 65399922 | 65399452 | ID=Msa0615840-mRNA-1:exon:18534;Parent=Msa0615840-mRNA-1 |
| chr4_2 | five_prime_UTR | 65391189 | 65391284 | 65391189 | ID=Msa0615840-mRNA-1:five_prime_utr;Parent=Msa0615840-mRNA-1 |
| chr4_2 | five_prime_UTR | 65391322 | 65391593 | 65391322 | ID=Msa0615840-mRNA-1:five_prime_utr;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65391594 | 65391761 | 65391594 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65391847 | 65391901 | 65391847 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65391998 | 65392149 | 65391998 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65393931 | 65393970 | 65393931 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65394610 | 65394702 | 65394610 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65394779 | 65394891 | 65394779 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65394988 | 65395062 | 65394988 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65395844 | 65395883 | 65395844 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65395974 | 65396056 | 65395974 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65396166 | 65396243 | 65396166 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65397498 | 65397641 | 65397498 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65398534 | 65398601 | 65398534 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65398980 | 65399094 | 65398980 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65399201 | 65399357 | 65399201 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | CDS | 65399452 | 65399549 | 65399452 | ID=Msa0615840-mRNA-1:cds;Parent=Msa0615840-mRNA-1 |
| chr4_2 | three_prime_UTR | 65399550 | 65399922 | 65399550 | ID=Msa0615840-mRNA-1:three_prime_utr;Parent=Msa0615840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
