AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1076560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1076560 MtrunA17_Chr7g0260571 99.525 421 2 0 5 425 178 598 0.0 871
Msa1076560 MtrunA17_Chr1g0184861 74.645 422 103 2 7 425 4 424 0.0 674
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1076560 AT2G38840.2 75.000 416 104 0 5 420 21 436 0.0 683
Msa1076560 AT2G38840.1 75.000 416 104 0 5 420 179 594 0.0 682

Find 161 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGGATTCATTGGCTATTA+TGG 0.116641 7_2:+75083054 Msa1076560:CDS
TGATACTGACTATCTTTATT+AGG 0.166330 7_2:-75082832 None:intergenic
GTACAAGGAAAATCTCTAAA+TGG 0.236462 7_2:+75083366 Msa1076560:CDS
GCATTCGATCAGCAACATTT+TGG 0.262273 7_2:+75084198 Msa1076560:CDS
AATCATGTCATACAGGAATA+TGG 0.275361 7_2:+75081864 Msa1076560:intron
GTCATACAGGAATATGGATT+TGG 0.280139 7_2:+75081870 Msa1076560:intron
CGGGATTCATTGGCTATTAT+GGG 0.286021 7_2:+75083055 Msa1076560:CDS
ATTCTATATTGGCGGTGTTA+TGG 0.294127 7_2:+75086104 Msa1076560:CDS
CTCTCTCTTTCTTGTTATGA+AGG 0.295186 7_2:+75081597 Msa1076560:five_prime_UTR
GATACTGACTATCTTTATTA+GGG 0.305401 7_2:-75082831 None:intergenic
TTGGGGAACACCTATAGATT+TGG 0.306157 7_2:+75081889 Msa1076560:five_prime_UTR
TTCTATATTGGCGGTGTTAT+GGG 0.307055 7_2:+75086105 Msa1076560:CDS
ATCATCAGATCAATCAAATT+CGG 0.317922 7_2:+75083035 Msa1076560:intron
TCATACAGGAATATGGATTT+GGG 0.336399 7_2:+75081871 Msa1076560:intron
TCATCACTCCGATATTCCTT+TGG 0.339042 7_2:+75086232 Msa1076560:three_prime_UTR
CGGTTGATGAAAATTGATAA+TGG 0.341994 7_2:-75079612 None:intergenic
AGACCTACACAAGGTTGTTT+TGG 0.349932 7_2:+75085298 Msa1076560:CDS
CAATCAAATTCGGGATTCAT+TGG 0.355291 7_2:+75083045 Msa1076560:CDS
GTCTAAGTCTCTATTTATAA+AGG 0.366560 7_2:+75085152 Msa1076560:CDS
CACTTTACTACAATCCAGTT+TGG 0.373270 7_2:+75085331 Msa1076560:CDS
CATCACTCCGATATTCCTTT+GGG 0.374851 7_2:+75086233 Msa1076560:three_prime_UTR
ATCCATCATATGTGAAGAAA+AGG 0.375973 7_2:+75083298 Msa1076560:CDS
TGGAATCTCTCCCTTGTTCA+AGG 0.380178 7_2:-75084025 None:intergenic
AGTTCTCAAGCTTCCTTCAA+TGG 0.384884 7_2:+75084889 Msa1076560:CDS
GTAATTGGACCGTACCGTTC+CGG 0.394679 7_2:+75081549 Msa1076560:five_prime_UTR
GAAGCTTGAAGATATCCTTC+TGG 0.396937 7_2:-75084144 None:intergenic
CCGTCAATTTCCAAATCTAT+AGG 0.403247 7_2:-75081899 None:intergenic
ATGGTTTCAGAAGAAACAAT+TGG 0.407560 7_2:-75079593 None:intergenic
ACTGTAAAGTAATAATTCAT+TGG 0.414181 7_2:-75086412 None:intergenic
CAGAAGGATTTGAAAGCATT+GGG 0.417042 7_2:+75081951 Msa1076560:five_prime_UTR
TTTGCCACTTATAGTTATGA+TGG 0.420136 7_2:+75079529 Msa1076560:five_prime_UTR
GTGCGAAGGTAAACCTTGTT+TGG 0.421349 7_2:-75079327 None:intergenic
GCAACTATAAAATGCCAAAC+TGG 0.427089 7_2:-75085345 None:intergenic
TCCACAAGAGAACCTGTTGA+TGG 0.427990 7_2:-75084045 None:intergenic
TTTCTCCCTCGTCACGGTTG+TGG 0.429616 7_2:+75085209 Msa1076560:CDS
TACAAGGAAAATCTCTAAAT+GGG 0.432658 7_2:+75083367 Msa1076560:CDS
TCATCAGATCAATCAAATTC+GGG 0.435878 7_2:+75083036 Msa1076560:intron
AAATGAACTTTATAATAAAC+CGG 0.436465 7_2:-75085236 None:intergenic
ACAGAAGGATTTGAAAGCAT+TGG 0.437082 7_2:+75081950 Msa1076560:five_prime_UTR
TATCGGAGTGATGAACAAAA+TGG 0.438346 7_2:-75086223 None:intergenic
TTGAACCTGCCAAGCTCTTG+TGG 0.441248 7_2:+75082592 Msa1076560:CDS
GGAACGGAGGTGGTTGTTGT+TGG 0.445650 7_2:-75079480 None:intergenic
GACAAAGCTTTGTGACTTGA+AGG 0.448277 7_2:+75083263 Msa1076560:CDS
AGGAGACAGAAATATTGATA+TGG 0.448597 7_2:+75082929 Msa1076560:intron
AGGTGGTTGTTGTTGGTTGA+AGG 0.450848 7_2:-75079473 None:intergenic
CCCATTGTCGAACCTGATCC+TGG 0.459576 7_2:+75080793 Msa1076560:five_prime_UTR
TCGTCACGGTTGTGGTTGGC+CGG 0.460211 7_2:+75085217 Msa1076560:CDS
TGTGTGCTTGCAACAGAACT+AGG 0.461742 7_2:-75086301 None:intergenic
AAGCTCGCCCAAAGGAATAT+CGG 0.466643 7_2:-75086240 None:intergenic
GTTTGTTTCCTTCCTGAAGC+AGG 0.468484 7_2:+75083395 Msa1076560:CDS
ATAAGCCACAAGAGCTTGGC+AGG 0.474426 7_2:-75082597 None:intergenic
CTTACTGCCACAGATGCAAT+GGG 0.475076 7_2:-75080874 None:intergenic
TTATGATGACTAACCGTCTC+AGG 0.475662 7_2:-75082136 None:intergenic
GTCCATCATGTCCTCGCAAT+CGG 0.478174 7_2:-75084858 None:intergenic
AGTCACAAAGCTTTGTCCGC+TGG 0.480181 7_2:-75083257 None:intergenic
CCAGGATCAGGTTCGACAAT+GGG 0.480240 7_2:-75080793 None:intergenic
AAGGGAGAGATTCCATCAAC+AGG 0.484642 7_2:+75084033 Msa1076560:CDS
CCTATAGATTTGGAAATTGA+CGG 0.485037 7_2:+75081899 Msa1076560:five_prime_UTR
TTACTTACCTGTCAAGATCA+AGG 0.494526 7_2:-75085398 None:intergenic
AAAACTTATGATGATTCAGT+TGG 0.497813 7_2:+75086198 Msa1076560:exon
TCGTCTATCACAGGAAGGCT+TGG 0.499537 7_2:+75080828 Msa1076560:five_prime_UTR
TAAGAAGTCAGTCACGCAAC+TGG 0.499993 7_2:+75084233 Msa1076560:CDS
TCCCTCGTCACGGTTGTGGT+TGG 0.503251 7_2:+75085213 Msa1076560:CDS
TAAGTTATACAGTGAAAAGA+TGG 0.504761 7_2:+75084101 Msa1076560:CDS
CATCTCCCACACAGCTTCTG+TGG 0.505192 7_2:+75086353 Msa1076560:three_prime_UTR
GAGTCTTCATTTGTTCTAAG+AGG 0.506255 7_2:+75086571 Msa1076560:three_prime_UTR
GCCCAGTCCTTGATCTTGAC+AGG 0.508041 7_2:+75085391 Msa1076560:CDS
TTCGATCCTTGTCCGTGCGA+AGG 0.508281 7_2:-75079341 None:intergenic
ATGCGTGACACGAAAACAAA+AGG 0.511208 7_2:+75081756 Msa1076560:five_prime_UTR
ATACTTGAAGCCTTGAACAA+GGG 0.513345 7_2:+75084015 Msa1076560:CDS
TGAAGATATCCTTCTGGAAG+AGG 0.514011 7_2:-75084138 None:intergenic
AGCTTTGTGACTTGAAGGAT+GGG 0.521130 7_2:+75083268 Msa1076560:CDS
AAGCTTTGTGACTTGAAGGA+TGG 0.521331 7_2:+75083267 Msa1076560:CDS
CAAGCACACAAAGTGTCAAA+TGG 0.522477 7_2:+75086314 Msa1076560:three_prime_UTR
TCTATCACAGGAAGGCTTGG+AGG 0.522783 7_2:+75080831 Msa1076560:five_prime_UTR
TGCAGATGGGCTATCCCACT+TGG 0.526646 7_2:+75086062 Msa1076560:intron
AGGGAAATCAGTGCAACAAA+TGG 0.528159 7_2:+75082786 Msa1076560:CDS
CTTCATTTGTTCTAAGAGGA+GGG 0.529334 7_2:+75086575 Msa1076560:three_prime_UTR
TCAATGGCAAAATTTAATGC+AGG 0.530565 7_2:+75084905 Msa1076560:CDS
TGAATTGAATTTACTGAACA+AGG 0.530929 7_2:-75079420 None:intergenic
GGTGGCTTTCTCCCTCGTCA+CGG 0.533465 7_2:+75085203 Msa1076560:CDS
AGCAAACTACGAGGGACGTA+TGG 0.536139 7_2:+75084979 Msa1076560:CDS
GTGTCCATCATAACTATAAG+TGG 0.536238 7_2:-75079533 None:intergenic
CGTCACCTCTAGCCATGTCA+TGG 0.537341 7_2:-75084167 None:intergenic
ACTTACTGCCACAGATGCAA+TGG 0.537826 7_2:-75080875 None:intergenic
TCTTCATTTGTTCTAAGAGG+AGG 0.539985 7_2:+75086574 Msa1076560:three_prime_UTR
CAGGTTCAAATGCAACATCC+TGG 0.541309 7_2:-75082578 None:intergenic
GATACTTGAAGCCTTGAACA+AGG 0.544169 7_2:+75084014 Msa1076560:intron
AACAAACCCCATTGCATCTG+TGG 0.545406 7_2:+75080867 Msa1076560:five_prime_UTR
TTGGATAAGCCACAAGAGCT+TGG 0.550397 7_2:-75082601 None:intergenic
TTTCTAACATTGGCCAAACA+AGG 0.553880 7_2:+75079314 Msa1076560:five_prime_UTR
AGCTTTGTCCGCTGGAGATG+TGG 0.557191 7_2:-75083249 None:intergenic
ATCCGTCCAAAGATTGTACA+AGG 0.558214 7_2:+75083351 Msa1076560:CDS
ACTGGATGAAGAAATAGATA+AGG 0.558410 7_2:+75084251 Msa1076560:CDS
TCCATCATATGTGAAGAAAA+GGG 0.560512 7_2:+75083299 Msa1076560:CDS
TCCATCAACAGGTTCTCTTG+TGG 0.561510 7_2:+75084044 Msa1076560:CDS
GAAGCTTGAGAACTTGAAGC+TGG 0.561670 7_2:-75084880 None:intergenic
TTCCTTGTACAATCTTTGGA+CGG 0.563359 7_2:-75083353 None:intergenic
AGAACTAGGTAGGTGCATGC+AGG 0.569739 7_2:-75086287 None:intergenic
TACCTGTCAAGATCAAGGAC+TGG 0.569959 7_2:-75085393 None:intergenic
TACAAAACTTCGTCTATCAC+AGG 0.570289 7_2:+75080819 Msa1076560:five_prime_UTR
GAAATCAGTGCAACAAATGG+TGG 0.572848 7_2:+75082789 Msa1076560:CDS
CACTTGCAATGTCCGTGTGT+TGG 0.574543 7_2:+75082443 Msa1076560:exon
AAAGATATTATTACACCAAG+TGG 0.576063 7_2:-75086077 None:intergenic
CAGTGAAAAGATGGCCACAT+TGG 0.576184 7_2:+75084110 Msa1076560:CDS
GTTGAAACAAGACAACATCA+TGG 0.576533 7_2:-75079387 None:intergenic
TCAAGCCACAGAAGCTGTGT+GGG 0.579053 7_2:-75086358 None:intergenic
GGTTTACCTTCGCACGGACA+AGG 0.580176 7_2:+75079335 Msa1076560:five_prime_UTR
AAAGACTTTCCGGAACGGTA+CGG 0.581971 7_2:-75081558 None:intergenic
ACATACTTGTGGTAAGCTAA+AGG 0.582503 7_2:-75083092 None:intergenic
CACCGATTGCGAGGACATGA+TGG 0.588869 7_2:+75084856 Msa1076560:CDS
TATCTATAATCTGCCTGAGA+CGG 0.594970 7_2:+75082123 Msa1076560:five_prime_UTR
AAGATATTATTACACCAAGT+GGG 0.595317 7_2:-75086076 None:intergenic
GCCAACCACAACCGTGACGA+GGG 0.595392 7_2:-75085214 None:intergenic
AGTCGAATGTATATGATGAT+CGG 0.595943 7_2:+75081975 Msa1076560:five_prime_UTR
GGCCAACCACAACCGTGACG+AGG 0.597641 7_2:-75085215 None:intergenic
GTCGTGTATTGACATGTAGA+CGG 0.597739 7_2:+75086494 Msa1076560:three_prime_UTR
TTGCTGATCGAATGCTTGCA+TGG 0.600379 7_2:-75084190 None:intergenic
TATTATGGGTGACAATAGTA+CGG 0.600421 7_2:+75083069 Msa1076560:CDS
TTTGATATCTGAAAATCGAA+AGG 0.602266 7_2:-75079501 None:intergenic
ACCAGGATCAGGTTCGACAA+TGG 0.602966 7_2:-75080794 None:intergenic
ATCAAGCCACAGAAGCTGTG+TGG 0.603181 7_2:-75086359 None:intergenic
TCGTGTATTGACATGTAGAC+GGG 0.604243 7_2:+75086495 Msa1076560:three_prime_UTR
TCTTCAAGCTTCCCATGACA+TGG 0.604681 7_2:+75084155 Msa1076560:CDS
AAACAAGGTTTACCTTCGCA+CGG 0.606024 7_2:+75079329 Msa1076560:five_prime_UTR
GTCACCTCTAGCCATGTCAT+GGG 0.607351 7_2:-75084166 None:intergenic
TAAATCTTCAAAGCTTTGTG+AGG 0.609297 7_2:+75084826 Msa1076560:CDS
AGTGTCAAATGGTGATCAGA+GGG 0.609348 7_2:+75086325 Msa1076560:three_prime_UTR
ACCTGTCAAGATCAAGGACT+GGG 0.612834 7_2:-75085392 None:intergenic
ACCAAGTACCTGCTTCAGGA+AGG 0.616523 7_2:-75083403 None:intergenic
AAAATCGAAAGGAACGGAGG+TGG 0.618551 7_2:-75079490 None:intergenic
AAGTGTCAAATGGTGATCAG+AGG 0.619570 7_2:+75086324 Msa1076560:three_prime_UTR
TTATAAAGGAGTACAACCAC+AGG 0.623382 7_2:+75085166 Msa1076560:CDS
GCTTCCCATGACATGGCTAG+AGG 0.624847 7_2:+75084162 Msa1076560:CDS
CTACGAGGGACGTATGGCAA+AGG 0.627470 7_2:+75084985 Msa1076560:CDS
GGCACTGTACACCGATTGCG+AGG 0.628615 7_2:+75084847 Msa1076560:CDS
CTGAAAATCGAAAGGAACGG+AGG 0.641717 7_2:-75079493 None:intergenic
GCTTTGTGACTTGAAGGATG+GGG 0.644739 7_2:+75083269 Msa1076560:CDS
CTGACTTCTTAGCATGGTGA+CGG 0.653596 7_2:-75084221 None:intergenic
TGGAAGAGGTAGAGCCAATG+TGG 0.653977 7_2:-75084124 None:intergenic
AAACTTCGTCTATCACAGGA+AGG 0.654561 7_2:+75080823 Msa1076560:five_prime_UTR
TGACCAAAACAACCTTGTGT+AGG 0.656892 7_2:-75085301 None:intergenic
CTTCACTCTATTCCAACACA+CGG 0.659292 7_2:-75082455 None:intergenic
GCGTGACTGACTTCTTAGCA+TGG 0.660593 7_2:-75084227 None:intergenic
TTGGCTCTACCTCTTCCAGA+AGG 0.665756 7_2:+75084129 Msa1076560:CDS
ATAACTATAAGTGGCAAATG+CGG 0.668267 7_2:-75079524 None:intergenic
CATACAGGAATATGGATTTG+GGG 0.676634 7_2:+75081872 Msa1076560:intron
ACCTTCAAAAGCAAACTACG+AGG 0.688387 7_2:+75084970 Msa1076560:CDS
TCAAACAGCCACATCTCCAG+CGG 0.692057 7_2:+75083241 Msa1076560:intron
ACTTACGCAGAAAATCACGT+TGG 0.700511 7_2:-75082620 None:intergenic
AAGCACAGAACTTATTACAG+TGG 0.700561 7_2:-75082101 None:intergenic
CCTTCAAAAGCAAACTACGA+GGG 0.700718 7_2:+75084971 Msa1076560:CDS
GTAAAATCAACATGATACTG+TGG 0.700820 7_2:-75086390 None:intergenic
CGTGTGTTGGAATAGAGTGA+AGG 0.701201 7_2:+75082456 Msa1076560:CDS
TATCTGAAAATCGAAAGGAA+CGG 0.702519 7_2:-75079496 None:intergenic
TATTTCTGGAGACCTACACA+AGG 0.706921 7_2:+75085289 Msa1076560:CDS
CCAACCAATTGAAAAGCCTG+TGG 0.707705 7_2:-75085182 None:intergenic
TACATGTCAATACACGACAG+TGG 0.727087 7_2:-75086489 None:intergenic
TGCTTGCAACAGAACTAGGT+AGG 0.736436 7_2:-75086297 None:intergenic
TTACTGCCACAGATGCAATG+GGG 0.746702 7_2:-75080873 None:intergenic
AAAAGAAACATGGATCACGG+TGG 0.783518 7_2:+75086129 Msa1076560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAAATTCAATTTTTATG+AGG + chr7_2:75079826-75079845 Msa1076560:intron 10.0%
!! ACAAAAAAAAAAAAAAAAAG+AGG + chr7_2:75086608-75086627 Msa1076560:three_prime_UTR 10.0%
!!! TAGAAGTCAATTTTATTTTT+GGG + chr7_2:75080243-75080262 Msa1076560:intron 15.0%
!! TAAGAAACATAAAAAAAAGT+TGG - chr7_2:75080657-75080676 None:intergenic 15.0%
!!! ATTCAAACTTTTATTTAATG+TGG + chr7_2:75080932-75080951 Msa1076560:intron 15.0%
!! TTAGCTAAAATTATTATGAA+TGG + chr7_2:75081368-75081387 Msa1076560:intron 15.0%
!! GTAATATTATTACTGATAAT+TGG - chr7_2:75082980-75082999 None:intergenic 15.0%
!!! ATTATGCTACATTTTATATA+AGG - chr7_2:75083668-75083687 None:intergenic 15.0%
!!! AATGTAGCATAATTTTTTTA+AGG + chr7_2:75083675-75083694 Msa1076560:intron 15.0%
!!! TCAAATATGTTATATAGTTT+TGG + chr7_2:75084389-75084408 Msa1076560:intron 15.0%
!!! TTTAAAGCTTATATTTACTA+TGG + chr7_2:75084737-75084756 Msa1076560:intron 15.0%
!! TTAAAGCTTATATTTACTAT+GGG + chr7_2:75084738-75084757 Msa1076560:intron 15.0%
!! AAATGAACTTTATAATAAAC+CGG - chr7_2:75085239-75085258 None:intergenic 15.0%
!!! ATCAAACTAACAATATTTTA+TGG + chr7_2:75086000-75086019 Msa1076560:intron 15.0%
!!! TATCTTTTTTCATTCTATAT+TGG + chr7_2:75086093-75086112 Msa1076560:CDS 15.0%
!! AAAGAGATAAAAGAAACTTA+CGG - chr7_2:75079635-75079654 None:intergenic 20.0%
!!! TTGTTAAAGTTAAAACCTTT+TGG + chr7_2:75079729-75079748 Msa1076560:intron 20.0%
!!! ATTCAATTTTTATGAGGTTA+AGG + chr7_2:75079832-75079851 Msa1076560:intron 20.0%
!!! TTCAATTTTTATGAGGTTAA+GGG + chr7_2:75079833-75079852 Msa1076560:intron 20.0%
!! ACTAAGTAATCTTCATTAAT+TGG - chr7_2:75080019-75080038 None:intergenic 20.0%
!!! GTAGAAGTCAATTTTATTTT+TGG + chr7_2:75080242-75080261 Msa1076560:intron 20.0%
!!! TTTTATTTTTGGGTCAATTA+TGG + chr7_2:75080253-75080272 Msa1076560:intron 20.0%
!!! CATTTTGTTTATATTATGGA+GGG - chr7_2:75080419-75080438 None:intergenic 20.0%
!! CTCCATAATATAAACAAAAT+GGG + chr7_2:75080418-75080437 Msa1076560:intron 20.0%
!!! TTCCCATTTTGTTTATATTA+TGG - chr7_2:75080423-75080442 None:intergenic 20.0%
!! TGGTGATAAATTGTTAATTT+AGG + chr7_2:75080515-75080534 Msa1076560:intron 20.0%
!! TGATAAATTGTTAATTTAGG+TGG + chr7_2:75080518-75080537 Msa1076560:intron 20.0%
!! GTTTGAATTTAGAAAACAAA+AGG - chr7_2:75080920-75080939 None:intergenic 20.0%
!! GAAATAATGACTTATCTAAA+TGG - chr7_2:75081038-75081057 None:intergenic 20.0%
!! ACATGTAAGTCTTAATATTT+CGG + chr7_2:75081231-75081250 Msa1076560:intron 20.0%
!!! TTTCTACTTTTATCACTTTA+TGG + chr7_2:75081487-75081506 Msa1076560:intron 20.0%
!!! TTGTTACTACTTTTTTTATC+AGG + chr7_2:75081527-75081546 Msa1076560:intron 20.0%
!!! TACTTTTTTTATCAGGTAAT+TGG + chr7_2:75081534-75081553 Msa1076560:intron 20.0%
!!! CTAACATATTTGTTTTCTTA+GGG + chr7_2:75081718-75081737 Msa1076560:intron 20.0%
!!! TTATCATTTTTCTCTTTGTT+AGG + chr7_2:75081789-75081808 Msa1076560:intron 20.0%
!! ACATCAAATTAACAACAAAA+AGG - chr7_2:75082531-75082550 None:intergenic 20.0%
!!! CAATGCTTATAAAGTTATTT+TGG + chr7_2:75082668-75082687 Msa1076560:intron 20.0%
!!! AAAAAATTGCTTTAGAAAAC+AGG - chr7_2:75082883-75082902 None:intergenic 20.0%
!! CAGTAATAATATTACTAGTT+TGG + chr7_2:75082985-75083004 Msa1076560:intron 20.0%
!!! TTTTATTAAAAACACTGCTT+TGG + chr7_2:75083190-75083209 Msa1076560:intron 20.0%
!!! AATATTTTGTTTGATTGAGA+GGG - chr7_2:75083789-75083808 None:intergenic 20.0%
!!! AAATATTTTGTTTGATTGAG+AGG - chr7_2:75083790-75083809 None:intergenic 20.0%
!! TCATCAGAAAACATTAAAAA+TGG - chr7_2:75083895-75083914 None:intergenic 20.0%
!!! TAAAAGATAAAGCTGTTTTA+TGG - chr7_2:75083981-75084000 None:intergenic 20.0%
!!! CATATTCATTTGTTACATTA+AGG - chr7_2:75085118-75085137 None:intergenic 20.0%
!!! AAGTTCATTTTGATTGAAAT+TGG + chr7_2:75085249-75085268 Msa1076560:CDS 20.0%
!!! ATGGTTACTTTTTATATTTC+TGG + chr7_2:75085275-75085294 Msa1076560:CDS 20.0%
!!! TTTAAGATCCATTATATTGT+AGG + chr7_2:75085484-75085503 Msa1076560:intron 20.0%
!! TGTTTGATTCATAAAAACTA+TGG + chr7_2:75085853-75085872 Msa1076560:intron 20.0%
!!! TTTTTATTGAAATTGCAGAT+GGG + chr7_2:75086049-75086068 Msa1076560:intron 20.0%
!!! TTTTTATTGCTGCTATATAA+TGG - chr7_2:75086161-75086180 None:intergenic 20.0%
!! ACTGTAAAGTAATAATTCAT+TGG - chr7_2:75086415-75086434 None:intergenic 20.0%
! TGAATTGAATTTACTGAACA+AGG - chr7_2:75079423-75079442 None:intergenic 25.0%
! TTTGATATCTGAAAATCGAA+AGG - chr7_2:75079504-75079523 None:intergenic 25.0%
! ATGTATGGATGGTAAATAAA+TGG + chr7_2:75079928-75079947 Msa1076560:intron 25.0%
! AAGATTACTTAGTGTATGTT+TGG + chr7_2:75080026-75080045 Msa1076560:intron 25.0%
! AATATATATACAACTCCAGA+TGG - chr7_2:75080161-75080180 None:intergenic 25.0%
!! ACTCTTGAGTTTTTCTTTTT+TGG + chr7_2:75080212-75080231 Msa1076560:intron 25.0%
! TAAGAATAGAAGATATTGTG+AGG + chr7_2:75080299-75080318 Msa1076560:intron 25.0%
!!! CCATTTTGTTTATATTATGG+AGG - chr7_2:75080420-75080439 None:intergenic 25.0%
! CCTCCATAATATAAACAAAA+TGG + chr7_2:75080417-75080436 Msa1076560:intron 25.0%
! ATGTTGCCAATTCAATAATT+TGG + chr7_2:75080580-75080599 Msa1076560:intron 25.0%
! TGTTGCCAATTCAATAATTT+GGG + chr7_2:75080581-75080600 Msa1076560:intron 25.0%
! GATATGACAAAACAATAACA+AGG - chr7_2:75080689-75080708 None:intergenic 25.0%
! CATAACTAACAAAAGAAGTT+TGG - chr7_2:75080730-75080749 None:intergenic 25.0%
! AAATCTGTACACACAAAAAT+TGG - chr7_2:75080773-75080792 None:intergenic 25.0%
! ACAGCAGATAGAAAATAAAT+AGG + chr7_2:75081173-75081192 Msa1076560:intron 25.0%
!! TACACCATAATATTTTCTAG+AGG - chr7_2:75081199-75081218 None:intergenic 25.0%
!!! CATAATAATTTTAGCTAACG+AGG - chr7_2:75081366-75081385 None:intergenic 25.0%
! ATTAAGCAAAAAAGACTTTC+CGG - chr7_2:75081571-75081590 None:intergenic 25.0%
!!! GCTAACATATTTGTTTTCTT+AGG + chr7_2:75081717-75081736 Msa1076560:intron 25.0%
!!! ATATTTGTTTTCTTAGGGTT+TGG + chr7_2:75081723-75081742 Msa1076560:intron 25.0%
!!! GAGCTCGTTTTAAATTTTTT+AGG + chr7_2:75082171-75082190 Msa1076560:intron 25.0%
!!! GAGAATAAAACATTTTAGCA+TGG - chr7_2:75082197-75082216 None:intergenic 25.0%
!!! TCTGCTTTGTAACATTTTTT+TGG + chr7_2:75082370-75082389 Msa1076560:five_prime_UTR 25.0%
!!! CTGCTTTGTAACATTTTTTT+GGG + chr7_2:75082371-75082390 Msa1076560:five_prime_UTR 25.0%
!!! TTGATGTATTTTTCAATTGC+TGG + chr7_2:75082544-75082563 Msa1076560:intron 25.0%
!! GATACTGACTATCTTTATTA+GGG - chr7_2:75082834-75082853 None:intergenic 25.0%
!! TGATACTGACTATCTTTATT+AGG - chr7_2:75082835-75082854 None:intergenic 25.0%
! ATCATCAGATCAATCAAATT+CGG + chr7_2:75083035-75083054 Msa1076560:intron 25.0%
! TACAAGGAAAATCTCTAAAT+GGG + chr7_2:75083367-75083386 Msa1076560:CDS 25.0%
!! GTTTTTCATGTTCTCTTTAA+TGG + chr7_2:75083424-75083443 Msa1076560:intron 25.0%
! CTTTAAGTAATAGTCTATGA+AGG + chr7_2:75083530-75083549 Msa1076560:intron 25.0%
! GAAAACATTAAAAATGGCAA+AGG - chr7_2:75083889-75083908 None:intergenic 25.0%
! TAAGTTATACAGTGAAAAGA+TGG + chr7_2:75084101-75084120 Msa1076560:CDS 25.0%
! GAAAAGAAAATAGGCTTATT+GGG + chr7_2:75084312-75084331 Msa1076560:intron 25.0%
! TTATTGGGAATTTAATTAGC+TGG + chr7_2:75084327-75084346 Msa1076560:intron 25.0%
! TTAAAGGATATTAAGCATCT+TGG - chr7_2:75084638-75084657 None:intergenic 25.0%
! ATATATCATCCAATCAAATG+CGG - chr7_2:75084668-75084687 None:intergenic 25.0%
! GGAAAAATCATATTTACTTG+AGG + chr7_2:75084759-75084778 Msa1076560:intron 25.0%
! GTCTAAGTCTCTATTTATAA+AGG + chr7_2:75085152-75085171 Msa1076560:CDS 25.0%
!!! TTCATTTTGATTGAAATTGG+AGG + chr7_2:75085252-75085271 Msa1076560:CDS 25.0%
! TTGAAAGAACGAAAGAAATA+CGG - chr7_2:75085425-75085444 None:intergenic 25.0%
! TTATCTAGCCTACAATATAA+TGG - chr7_2:75085495-75085514 None:intergenic 25.0%
! TCATATAAATCGATGTAAAC+AGG - chr7_2:75085549-75085568 None:intergenic 25.0%
!! TGGTAAATAGTTTTCTTTGT+TGG + chr7_2:75085873-75085892 Msa1076560:intron 25.0%
!! TAAATAGTTTTCTTTGTTGG+CGG + chr7_2:75085876-75085895 Msa1076560:intron 25.0%
!! CTTTTTATTGAAATTGCAGA+TGG + chr7_2:75086048-75086067 Msa1076560:intron 25.0%
! AAGATATTATTACACCAAGT+GGG - chr7_2:75086079-75086098 None:intergenic 25.0%
! AAAGATATTATTACACCAAG+TGG - chr7_2:75086080-75086099 None:intergenic 25.0%
!!! CTTTTTTCATTCTATATTGG+CGG + chr7_2:75086096-75086115 Msa1076560:CDS 25.0%
! AAAACTTATGATGATTCAGT+TGG + chr7_2:75086198-75086217 Msa1076560:exon 25.0%
!!! AGCTTTTTCATTTTTGTACA+TGG + chr7_2:75086258-75086277 Msa1076560:three_prime_UTR 25.0%
!!! TGTCACATTTTAGAGTAAAT+TGG + chr7_2:75086441-75086460 Msa1076560:three_prime_UTR 25.0%
!!! GGAGTTGTTTTTTCTAACAT+TGG + chr7_2:75079304-75079323 Msa1076560:five_prime_UTR 30.0%
TATCTGAAAATCGAAAGGAA+CGG - chr7_2:75079499-75079518 None:intergenic 30.0%
ATAACTATAAGTGGCAAATG+CGG - chr7_2:75079527-75079546 None:intergenic 30.0%
! TTTGCCACTTATAGTTATGA+TGG + chr7_2:75079529-75079548 Msa1076560:five_prime_UTR 30.0%
ATGGTTTCAGAAGAAACAAT+TGG - chr7_2:75079596-75079615 None:intergenic 30.0%
!! CGGTTGATGAAAATTGATAA+TGG - chr7_2:75079615-75079634 None:intergenic 30.0%
ATGGATGGTAAATAAATGGA+TGG + chr7_2:75079932-75079951 Msa1076560:intron 30.0%
TACTTAGTGTATGTTTGGAT+CGG + chr7_2:75080031-75080050 Msa1076560:intron 30.0%
TAAGTGTTTAACCGTATGTT+TGG - chr7_2:75080125-75080144 None:intergenic 30.0%
AAACATACGGTTAAACACTT+AGG + chr7_2:75080124-75080143 Msa1076560:intron 30.0%
!! TTTTGGGTCAATTATGGAAT+AGG + chr7_2:75080259-75080278 Msa1076560:intron 30.0%
GTTGCCAATTCAATAATTTG+GGG + chr7_2:75080582-75080601 Msa1076560:intron 30.0%
!! ATTGTTTTGTCATATCCTCT+TGG + chr7_2:75080693-75080712 Msa1076560:intron 30.0%
!! TTGTTTTGTCATATCCTCTT+GGG + chr7_2:75080694-75080713 Msa1076560:intron 30.0%
TCGTAACACTTATTGATGTT+TGG + chr7_2:75080959-75080978 Msa1076560:intron 30.0%
TAACACTTATTGATGTTTGG+TGG + chr7_2:75080962-75080981 Msa1076560:intron 30.0%
! ATGGATTATGCTATTCAACA+TGG - chr7_2:75081019-75081038 None:intergenic 30.0%
ATATCAATTAGCAACACACT+CGG - chr7_2:75081062-75081081 None:intergenic 30.0%
! TTCTAAGAAAATGTAACAGC+AGG - chr7_2:75081092-75081111 None:intergenic 30.0%
! TAGGCCTCTAGAAAATATTA+TGG + chr7_2:75081192-75081211 Msa1076560:intron 30.0%
! AGATTTTCTGTCACATCTTT+AGG - chr7_2:75081281-75081300 None:intergenic 30.0%
AGAAAATCTTTACAAGAGTG+AGG + chr7_2:75081292-75081311 Msa1076560:intron 30.0%
TTCATTGTGATTCAAAGTGA+CGG + chr7_2:75081411-75081430 Msa1076560:intron 30.0%
TGTTCCACATTTATCATTCA+TGG + chr7_2:75081464-75081483 Msa1076560:intron 30.0%
GAAACCATGAATGATAAATG+TGG - chr7_2:75081471-75081490 None:intergenic 30.0%
ACTTTATGGCTTTCTTAATC+AGG + chr7_2:75081501-75081520 Msa1076560:intron 30.0%
GTGATAAGAGTAAATTCTAG+TGG - chr7_2:75081637-75081656 None:intergenic 30.0%
! TCTTATCACATGCAGTTTTT+AGG + chr7_2:75081648-75081667 Msa1076560:intron 30.0%
CTCATTTAATCATGTCATAC+AGG + chr7_2:75081857-75081876 Msa1076560:intron 30.0%
AATCATGTCATACAGGAATA+TGG + chr7_2:75081864-75081883 Msa1076560:intron 30.0%
TCATACAGGAATATGGATTT+GGG + chr7_2:75081871-75081890 Msa1076560:intron 30.0%
CCTATAGATTTGGAAATTGA+CGG + chr7_2:75081899-75081918 Msa1076560:five_prime_UTR 30.0%
! GTCTTTTACATTGATACAGA+AGG + chr7_2:75081935-75081954 Msa1076560:five_prime_UTR 30.0%
AGTCGAATGTATATGATGAT+CGG + chr7_2:75081975-75081994 Msa1076560:five_prime_UTR 30.0%
CAAAAGGAAAACACAAGAAA+AGG - chr7_2:75082064-75082083 None:intergenic 30.0%
!!! ACATTTTTTTGGGTAAATCG+TGG + chr7_2:75082381-75082400 Msa1076560:five_prime_UTR 30.0%
AATAGTTGATTAGATGAACG+AGG - chr7_2:75082501-75082520 None:intergenic 30.0%
!!! TTTCAATTGCTGGCTTTTAT+AGG + chr7_2:75082554-75082573 Msa1076560:intron 30.0%
!!! TTCAATTGCTGGCTTTTATA+GGG + chr7_2:75082555-75082574 Msa1076560:intron 30.0%
! AACTTTATAAGCATTGCATG+AGG - chr7_2:75082664-75082683 None:intergenic 30.0%
!! GCTCTTTATATTTAACTTGC+AGG + chr7_2:75082909-75082928 Msa1076560:intron 30.0%
AGGAGACAGAAATATTGATA+TGG + chr7_2:75082929-75082948 Msa1076560:intron 30.0%
TCATCAGATCAATCAAATTC+GGG + chr7_2:75083036-75083055 Msa1076560:intron 30.0%
TATTATGGGTGACAATAGTA+CGG + chr7_2:75083069-75083088 Msa1076560:CDS 30.0%
!! ACTGATTTTTAGAAGACATG+AGG - chr7_2:75083123-75083142 None:intergenic 30.0%
TAAGAATGAATTCCACGTTA+GGG - chr7_2:75083164-75083183 None:intergenic 30.0%
ATAAGAATGAATTCCACGTT+AGG - chr7_2:75083165-75083184 None:intergenic 30.0%
ATTAAAAACACTGCTTTGGT+TGG + chr7_2:75083194-75083213 Msa1076560:intron 30.0%
GGCTAATTAATCCTTGAAAT+TGG + chr7_2:75083215-75083234 Msa1076560:intron 30.0%
ATCCATCATATGTGAAGAAA+AGG + chr7_2:75083298-75083317 Msa1076560:CDS 30.0%
TCCATCATATGTGAAGAAAA+GGG + chr7_2:75083299-75083318 Msa1076560:CDS 30.0%
! GATTTTCCTTGTACAATCTT+TGG - chr7_2:75083360-75083379 None:intergenic 30.0%
GTACAAGGAAAATCTCTAAA+TGG + chr7_2:75083366-75083385 Msa1076560:CDS 30.0%
AACAACAGATATCTCTAACA+TGG - chr7_2:75083509-75083528 None:intergenic 30.0%
TAAGGAGATACAAAGTAAGT+TGG + chr7_2:75083693-75083712 Msa1076560:intron 30.0%
AGGAGATAACTCTCTTAATT+TGG - chr7_2:75083759-75083778 None:intergenic 30.0%
AGAGAAAACATACTGCATAA+GGG - chr7_2:75083855-75083874 None:intergenic 30.0%
AAATGGCAAAGGACTAAATT+GGG - chr7_2:75083878-75083897 None:intergenic 30.0%
AAAATGGCAAAGGACTAAAT+TGG - chr7_2:75083879-75083898 None:intergenic 30.0%
ACTGGATGAAGAAATAGATA+AGG + chr7_2:75084251-75084270 Msa1076560:CDS 30.0%
GGAAAAGAAAATAGGCTTAT+TGG + chr7_2:75084311-75084330 Msa1076560:intron 30.0%
CAAATGCGGCTAAAATTTAA+AGG - chr7_2:75084654-75084673 None:intergenic 30.0%
!! AAATTTTAGCCGCATTTGAT+TGG + chr7_2:75084656-75084675 Msa1076560:intron 30.0%
!!! CTCTATTTTGATCTTGGAAT+TGG + chr7_2:75084704-75084723 Msa1076560:intron 30.0%
TTACTTGAGGATAATTATGC+AGG + chr7_2:75084772-75084791 Msa1076560:intron 30.0%
! TAAATCTTCAAAGCTTTGTG+AGG + chr7_2:75084826-75084845 Msa1076560:CDS 30.0%
! GCATTAAATTTTGCCATTGA+AGG - chr7_2:75084905-75084924 None:intergenic 30.0%
TCAATGGCAAAATTTAATGC+AGG + chr7_2:75084905-75084924 Msa1076560:CDS 30.0%
ATGTTAAGCATATGAAACAG+TGG - chr7_2:75085094-75085113 None:intergenic 30.0%
ACAAATGAATATGCAGATGT+TGG + chr7_2:75085125-75085144 Msa1076560:intron 30.0%
!! TTTTGATTGAAATTGGAGGA+TGG + chr7_2:75085256-75085275 Msa1076560:CDS 30.0%
ATAAACACTTGTGAGATTGT+TGG + chr7_2:75085583-75085602 Msa1076560:intron 30.0%
CTTGGAGAGCTTATAAAAAT+AGG - chr7_2:75085657-75085676 None:intergenic 30.0%
! TTTTATAAGCTCTCCAAGAT+TGG + chr7_2:75085659-75085678 Msa1076560:intron 30.0%
!! GTTGTTTTCATAACCAATCT+TGG - chr7_2:75085675-75085694 None:intergenic 30.0%
TTCTTTGTCGTACTTTAAGT+TGG + chr7_2:75085806-75085825 Msa1076560:intron 30.0%
! TCTTTGTCGTACTTTAAGTT+GGG + chr7_2:75085807-75085826 Msa1076560:intron 30.0%
! AAATAGTTTTCTTTGTTGGC+GGG + chr7_2:75085877-75085896 Msa1076560:intron 30.0%
! TTCCATTTTCTCTTAAGCAA+TGG + chr7_2:75085952-75085971 Msa1076560:intron 30.0%
TGTTATGGGAAAAAGAAACA+TGG + chr7_2:75086119-75086138 Msa1076560:CDS 30.0%
!! CATAAGTTTTAGTCTGTTCT+TGG - chr7_2:75086188-75086207 None:intergenic 30.0%
GTAAAATCAACATGATACTG+TGG - chr7_2:75086393-75086412 None:intergenic 30.0%
TTTCTAACATTGGCCAAACA+AGG + chr7_2:75079314-75079333 Msa1076560:five_prime_UTR 35.0%
GTTGAAACAAGACAACATCA+TGG - chr7_2:75079390-75079409 None:intergenic 35.0%
GTGTCCATCATAACTATAAG+TGG - chr7_2:75079536-75079555 None:intergenic 35.0%
!! GTTTGTTTGTTTCTGAGATC+TGG + chr7_2:75079682-75079701 Msa1076560:intron 35.0%
! CTGGTAACTGTTTTCAGTTT+TGG + chr7_2:75079701-75079720 Msa1076560:intron 35.0%
! AACCTTTTGGATCCTTTCTT+TGG + chr7_2:75079742-75079761 Msa1076560:intron 35.0%
AATTACCCAACTCCAAAGAA+AGG - chr7_2:75079757-75079776 None:intergenic 35.0%
!! TTTCTTTGGAGTTGGGTAAT+TGG + chr7_2:75079756-75079775 Msa1076560:intron 35.0%
!! TTCTTTGGAGTTGGGTAATT+GGG + chr7_2:75079757-75079776 Msa1076560:intron 35.0%
ATTCAAGCTAGCTCATGATT+TGG - chr7_2:75079890-75079909 None:intergenic 35.0%
! ATGAGCTAGCTTGAATTTAG+TGG + chr7_2:75079894-75079913 Msa1076560:intron 35.0%
! ATCGTTTGCTAATGTATGGA+TGG + chr7_2:75079917-75079936 Msa1076560:intron 35.0%
GATGGTAAATAAATGGATGG+TGG + chr7_2:75079935-75079954 Msa1076560:intron 35.0%
GTCAATTATGGAATAGGAGT+TGG + chr7_2:75080265-75080284 Msa1076560:intron 35.0%
CATGTACAAGAATAGAGTTG+CGG + chr7_2:75080325-75080344 Msa1076560:intron 35.0%
! TCTCAAGTTGTACATAGATG+TGG + chr7_2:75080495-75080514 Msa1076560:intron 35.0%
TGATAACAAAGAAAGAGTCC+CGG - chr7_2:75080608-75080627 None:intergenic 35.0%
GTACACACAAAAATTGGACA+AGG - chr7_2:75080767-75080786 None:intergenic 35.0%
TACAAAACTTCGTCTATCAC+AGG + chr7_2:75080819-75080838 Msa1076560:five_prime_UTR 35.0%
CAAGTTAAGTCAACTTTCAG+AGG - chr7_2:75081131-75081150 None:intergenic 35.0%
! CTCTGAAAGTTGACTTAACT+TGG + chr7_2:75081129-75081148 Msa1076560:intron 35.0%
GAGGAATTAGAAATTGCGAA+AGG + chr7_2:75081311-75081330 Msa1076560:intron 35.0%
! CTCTCTCTTTCTTGTTATGA+AGG + chr7_2:75081597-75081616 Msa1076560:five_prime_UTR 35.0%
TTCTCTTTGTTAGGCTTAGT+TGG + chr7_2:75081798-75081817 Msa1076560:intron 35.0%
GTCATACAGGAATATGGATT+TGG + chr7_2:75081870-75081889 Msa1076560:intron 35.0%
CATACAGGAATATGGATTTG+GGG + chr7_2:75081872-75081891 Msa1076560:intron 35.0%
CCGTCAATTTCCAAATCTAT+AGG - chr7_2:75081902-75081921 None:intergenic 35.0%
! ACAGAAGGATTTGAAAGCAT+TGG + chr7_2:75081950-75081969 Msa1076560:five_prime_UTR 35.0%
!! CAGAAGGATTTGAAAGCATT+GGG + chr7_2:75081951-75081970 Msa1076560:five_prime_UTR 35.0%
! TTCTTGTGTTTTCCTTTTGC+AGG + chr7_2:75082065-75082084 Msa1076560:intron 35.0%
AAGCACAGAACTTATTACAG+TGG - chr7_2:75082104-75082123 None:intergenic 35.0%
TATCTATAATCTGCCTGAGA+CGG + chr7_2:75082123-75082142 Msa1076560:five_prime_UTR 35.0%
TAAAACGAGCTCATTTCTGA+GGG - chr7_2:75082163-75082182 None:intergenic 35.0%
TTAAAACGAGCTCATTTCTG+AGG - chr7_2:75082164-75082183 None:intergenic 35.0%
! TCGCTGAAGAATTTTATGGA+AGG + chr7_2:75082271-75082290 Msa1076560:five_prime_UTR 35.0%
TTTGGTCACTGCTGAATAAT+TGG + chr7_2:75082686-75082705 Msa1076560:intron 35.0%
TTGGTCACTGCTGAATAATT+GGG + chr7_2:75082687-75082706 Msa1076560:intron 35.0%
ATCCAATAGAGTTGACATGA+TGG - chr7_2:75082738-75082757 None:intergenic 35.0%
TTTCCTTAATATCCTGCAGA+AGG + chr7_2:75082766-75082785 Msa1076560:intron 35.0%
TTCCTTAATATCCTGCAGAA+GGG + chr7_2:75082767-75082786 Msa1076560:intron 35.0%
TGATATGGTATAGTCTCTTC+TGG + chr7_2:75082944-75082963 Msa1076560:intron 35.0%
CAATCAAATTCGGGATTCAT+TGG + chr7_2:75083045-75083064 Msa1076560:CDS 35.0%
ACATACTTGTGGTAAGCTAA+AGG - chr7_2:75083095-75083114 None:intergenic 35.0%
! CTGTTTGAAGTCCAATTTCA+AGG - chr7_2:75083229-75083248 None:intergenic 35.0%
! TCCCTTTTCTTCACATATGA+TGG - chr7_2:75083303-75083322 None:intergenic 35.0%
TTCCTTGTACAATCTTTGGA+CGG - chr7_2:75083356-75083375 None:intergenic 35.0%
GAGATGCTAATAGAGAGAAA+GGG - chr7_2:75083719-75083738 None:intergenic 35.0%
AGAGATGCTAATAGAGAGAA+AGG - chr7_2:75083720-75083739 None:intergenic 35.0%
!! TTTTGTTTGATTGAGAGGGA+GGG - chr7_2:75083785-75083804 None:intergenic 35.0%
!! ATTTTGTTTGATTGAGAGGG+AGG - chr7_2:75083786-75083805 None:intergenic 35.0%
! TAAGGGTTTGTTTGGTTCAA+AGG - chr7_2:75083838-75083857 None:intergenic 35.0%
! ATACTGCATAAGGGTTTGTT+TGG - chr7_2:75083846-75083865 None:intergenic 35.0%
GAGAGAAAACATACTGCATA+AGG - chr7_2:75083856-75083875 None:intergenic 35.0%
ATACTTGAAGCCTTGAACAA+GGG + chr7_2:75084015-75084034 Msa1076560:CDS 35.0%
! TCTTGTGGAGATTTTCAACA+AGG + chr7_2:75084059-75084078 Msa1076560:CDS 35.0%
GTGATTCATAAGTCCTTCAT+AGG - chr7_2:75084542-75084561 None:intergenic 35.0%
!!! AGTCTGCTCTATTTTGATCT+TGG + chr7_2:75084698-75084717 Msa1076560:intron 35.0%
! ACTTTTGAGCATGATTGTGT+TGG + chr7_2:75084947-75084966 Msa1076560:CDS 35.0%
TATGAAACAGTGGCAAATCA+AGG - chr7_2:75085084-75085103 None:intergenic 35.0%
! TTATAAAGGAGTACAACCAC+AGG + chr7_2:75085166-75085185 Msa1076560:CDS 35.0%
CACTTTACTACAATCCAGTT+TGG + chr7_2:75085331-75085350 Msa1076560:CDS 35.0%
GCAACTATAAAATGCCAAAC+TGG - chr7_2:75085348-75085367 None:intergenic 35.0%
! GCATTTTATAGTTGCATCGT+GGG + chr7_2:75085353-75085372 Msa1076560:CDS 35.0%
TTACTTACCTGTCAAGATCA+AGG - chr7_2:75085401-75085420 None:intergenic 35.0%
! GCTAGATAAGTTAAGTTGTG+TGG + chr7_2:75085506-75085525 Msa1076560:intron 35.0%
AGATTGTTGGAAACAGCTTA+TGG + chr7_2:75085596-75085615 Msa1076560:intron 35.0%
! AATAGTTTTCTTTGTTGGCG+GGG + chr7_2:75085878-75085897 Msa1076560:intron 35.0%
GAGAAAATGGAATGCAAGTA+GGG - chr7_2:75085944-75085963 None:intergenic 35.0%
AGAGAAAATGGAATGCAAGT+AGG - chr7_2:75085945-75085964 None:intergenic 35.0%
! CTCTAAAAGATAGTCAACAG+TGG - chr7_2:75085978-75085997 None:intergenic 35.0%
! ATTCTATATTGGCGGTGTTA+TGG + chr7_2:75086104-75086123 Msa1076560:CDS 35.0%
!! TTCTATATTGGCGGTGTTAT+GGG + chr7_2:75086105-75086124 Msa1076560:CDS 35.0%
GGAAAAAGAAACATGGATCA+CGG + chr7_2:75086126-75086145 Msa1076560:CDS 35.0%
TATCGGAGTGATGAACAAAA+TGG - chr7_2:75086226-75086245 None:intergenic 35.0%
! GAGTCTTCATTTGTTCTAAG+AGG + chr7_2:75086571-75086590 Msa1076560:three_prime_UTR 35.0%
!! TCTTCATTTGTTCTAAGAGG+AGG + chr7_2:75086574-75086593 Msa1076560:three_prime_UTR 35.0%
!! CTTCATTTGTTCTAAGAGGA+GGG + chr7_2:75086575-75086594 Msa1076560:three_prime_UTR 35.0%
AAACAAGGTTTACCTTCGCA+CGG + chr7_2:75079329-75079348 Msa1076560:five_prime_UTR 40.0%
CTCCAAAGAAAGGATCCAAA+AGG - chr7_2:75079747-75079766 None:intergenic 40.0%
!! TTGGATCCTTTCTTTGGAGT+TGG + chr7_2:75079748-75079767 Msa1076560:intron 40.0%
!! TGGATCCTTTCTTTGGAGTT+GGG + chr7_2:75079749-75079768 Msa1076560:intron 40.0%
!! TCTTTGGAGTTGGGTAATTG+GGG + chr7_2:75079758-75079777 Msa1076560:intron 40.0%
AACCATCTCGTGAGACAAAA+TGG - chr7_2:75079803-75079822 None:intergenic 40.0%
! GTGGATCGTTTGCTAATGTA+TGG + chr7_2:75079913-75079932 Msa1076560:intron 40.0%
TTAGTGTATGTTTGGATCGG+CGG + chr7_2:75080034-75080053 Msa1076560:intron 40.0%
TCACAACACCACCAAACATA+CGG + chr7_2:75080111-75080130 Msa1076560:intron 40.0%
GTGTTTAACCGTATGTTTGG+TGG - chr7_2:75080122-75080141 None:intergenic 40.0%
!!! TAGGCTTTTTAGTTGCCATC+TGG + chr7_2:75080143-75080162 Msa1076560:intron 40.0%
! CCAATTCAATAATTTGGGGC+CGG + chr7_2:75080586-75080605 Msa1076560:intron 40.0%
! CAATTCAATAATTTGGGGCC+GGG + chr7_2:75080587-75080606 Msa1076560:intron 40.0%
TTGGTCATACAATACCCAAG+AGG - chr7_2:75080711-75080730 None:intergenic 40.0%
!! AGTTTTGTATGACCAGGATC+AGG - chr7_2:75080808-75080827 None:intergenic 40.0%
!! AGACGAAGTTTTGTATGACC+AGG - chr7_2:75080814-75080833 None:intergenic 40.0%
AAACTTCGTCTATCACAGGA+AGG + chr7_2:75080823-75080842 Msa1076560:five_prime_UTR 40.0%
CTAACGAGGATCATCAACAT+TGG - chr7_2:75081352-75081371 None:intergenic 40.0%
GCAAAAAAGACTTTCCGGAA+CGG - chr7_2:75081566-75081585 None:intergenic 40.0%
!!! TGTTTTCTTAGGGTTTGGTG+TGG + chr7_2:75081728-75081747 Msa1076560:intron 40.0%
!!! GTTTTCTTAGGGTTTGGTGT+GGG + chr7_2:75081729-75081748 Msa1076560:intron 40.0%
ATGCGTGACACGAAAACAAA+AGG + chr7_2:75081756-75081775 Msa1076560:five_prime_UTR 40.0%
ACACGAAAACAAAAGGTGGA+TGG + chr7_2:75081763-75081782 Msa1076560:intron 40.0%
TTGGGGAACACCTATAGATT+TGG + chr7_2:75081889-75081908 Msa1076560:five_prime_UTR 40.0%
CAGAGCAAATATCCTGCAAA+AGG - chr7_2:75082080-75082099 None:intergenic 40.0%
! CTTTTGCAGGATATTTGCTC+TGG + chr7_2:75082078-75082097 Msa1076560:intron 40.0%
TTATGATGACTAACCGTCTC+AGG - chr7_2:75082139-75082158 None:intergenic 40.0%
AAAACGAGCTCATTTCTGAG+GGG - chr7_2:75082162-75082181 None:intergenic 40.0%
! CATCTCTAGACTCTCTTTTG+CGG + chr7_2:75082242-75082261 Msa1076560:five_prime_UTR 40.0%
! GAGCTCGCTGAAGAATTTTA+TGG + chr7_2:75082267-75082286 Msa1076560:five_prime_UTR 40.0%
CTTCACTCTATTCCAACACA+CGG - chr7_2:75082458-75082477 None:intergenic 40.0%
ATTAGATGAACGAGGAGCTA+AGG - chr7_2:75082493-75082512 None:intergenic 40.0%
ACTTACGCAGAAAATCACGT+TGG - chr7_2:75082623-75082642 None:intergenic 40.0%
!! AGAGTTGACATGATGGACAA+GGG - chr7_2:75082731-75082750 None:intergenic 40.0%
!! TAGAGTTGACATGATGGACA+AGG - chr7_2:75082732-75082751 None:intergenic 40.0%
GTCCATCATGTCAACTCTAT+TGG + chr7_2:75082733-75082752 Msa1076560:intron 40.0%
TTCCCTTCTGCAGGATATTA+AGG - chr7_2:75082772-75082791 None:intergenic 40.0%
AGGGAAATCAGTGCAACAAA+TGG + chr7_2:75082786-75082805 Msa1076560:CDS 40.0%
GAAATCAGTGCAACAAATGG+TGG + chr7_2:75082789-75082808 Msa1076560:CDS 40.0%
! TCGGGATTCATTGGCTATTA+TGG + chr7_2:75083054-75083073 Msa1076560:CDS 40.0%
! CGGGATTCATTGGCTATTAT+GGG + chr7_2:75083055-75083074 Msa1076560:CDS 40.0%
ATGAGGAAGACACATACTTG+TGG - chr7_2:75083106-75083125 None:intergenic 40.0%
TTTCCATTTCAACCCTAACG+TGG + chr7_2:75083149-75083168 Msa1076560:intron 40.0%
ATTCCACGTTAGGGTTGAAA+TGG - chr7_2:75083155-75083174 None:intergenic 40.0%
! GACAAAGCTTTGTGACTTGA+AGG + chr7_2:75083263-75083282 Msa1076560:CDS 40.0%
! AAGCTTTGTGACTTGAAGGA+TGG + chr7_2:75083267-75083286 Msa1076560:CDS 40.0%
! AGCTTTGTGACTTGAAGGAT+GGG + chr7_2:75083268-75083287 Msa1076560:CDS 40.0%
ATCCGTCCAAAGATTGTACA+AGG + chr7_2:75083351-75083370 Msa1076560:CDS 40.0%
AAAAACCAAGTACCTGCTTC+AGG - chr7_2:75083410-75083429 None:intergenic 40.0%
TATGGAACCTCTCCAACATT+GGG + chr7_2:75083583-75083602 Msa1076560:intron 40.0%
! AATTTGGTTCACAGAGCGAA+GGG - chr7_2:75083743-75083762 None:intergenic 40.0%
! TAATTTGGTTCACAGAGCGA+AGG - chr7_2:75083744-75083763 None:intergenic 40.0%
TTTGTTTGATTGAGAGGGAG+GGG - chr7_2:75083784-75083803 None:intergenic 40.0%
! GTTTGTTTGGTTCAAAGGAG+GGG - chr7_2:75083833-75083852 None:intergenic 40.0%
! GGTTTGTTTGGTTCAAAGGA+GGG - chr7_2:75083834-75083853 None:intergenic 40.0%
GATACTTGAAGCCTTGAACA+AGG + chr7_2:75084014-75084033 Msa1076560:intron 40.0%
! TGAAGATATCCTTCTGGAAG+AGG - chr7_2:75084141-75084160 None:intergenic 40.0%
GAAGCTTGAAGATATCCTTC+TGG - chr7_2:75084147-75084166 None:intergenic 40.0%
! GCATTCGATCAGCAACATTT+TGG + chr7_2:75084198-75084217 Msa1076560:CDS 40.0%
GGGAGCTTGGAAAAGAAAAT+AGG + chr7_2:75084303-75084322 Msa1076560:intron 40.0%
AAGACACTAGCAACAAACAC+AGG - chr7_2:75084472-75084491 None:intergenic 40.0%
AGTTCTCAAGCTTCCTTCAA+TGG + chr7_2:75084889-75084908 Msa1076560:CDS 40.0%
ACCTTCAAAAGCAAACTACG+AGG + chr7_2:75084970-75084989 Msa1076560:CDS 40.0%
CCTTCAAAAGCAAACTACGA+GGG + chr7_2:75084971-75084990 Msa1076560:CDS 40.0%
CAGTGGCAAATCAAGGAAAA+TGG - chr7_2:75085077-75085096 None:intergenic 40.0%
! ACAACCACAGGCTTTTCAAT+TGG + chr7_2:75085178-75085197 Msa1076560:CDS 40.0%
!! TATTTCTGGAGACCTACACA+AGG + chr7_2:75085289-75085308 Msa1076560:CDS 40.0%
! AGACCTACACAAGGTTGTTT+TGG + chr7_2:75085298-75085317 Msa1076560:CDS 40.0%
TGACCAAAACAACCTTGTGT+AGG - chr7_2:75085304-75085323 None:intergenic 40.0%
! GGCATTTTATAGTTGCATCG+TGG + chr7_2:75085352-75085371 Msa1076560:CDS 40.0%
TGTGTGGTTTCATGACTCTT+AGG + chr7_2:75085522-75085541 Msa1076560:intron 40.0%
GTGTGGTTTCATGACTCTTA+GGG + chr7_2:75085523-75085542 Msa1076560:intron 40.0%
AAATGGAATGCAAGTAGGGT+CGG - chr7_2:75085940-75085959 None:intergenic 40.0%
GGCCATTGCTTAAGAGAAAA+TGG - chr7_2:75085957-75085976 None:intergenic 40.0%
AAAAGAAACATGGATCACGG+TGG + chr7_2:75086129-75086148 Msa1076560:CDS 40.0%
TCATCACTCCGATATTCCTT+TGG + chr7_2:75086232-75086251 Msa1076560:three_prime_UTR 40.0%
CATCACTCCGATATTCCTTT+GGG + chr7_2:75086233-75086252 Msa1076560:three_prime_UTR 40.0%
AAATGAAAAAGCTCGCCCAA+AGG - chr7_2:75086251-75086270 None:intergenic 40.0%
! CAAGCACACAAAGTGTCAAA+TGG + chr7_2:75086314-75086333 Msa1076560:three_prime_UTR 40.0%
AAGTGTCAAATGGTGATCAG+AGG + chr7_2:75086324-75086343 Msa1076560:three_prime_UTR 40.0%
AGTGTCAAATGGTGATCAGA+GGG + chr7_2:75086325-75086344 Msa1076560:three_prime_UTR 40.0%
TACATGTCAATACACGACAG+TGG - chr7_2:75086492-75086511 None:intergenic 40.0%
! GTCGTGTATTGACATGTAGA+CGG + chr7_2:75086494-75086513 Msa1076560:three_prime_UTR 40.0%
! TCGTGTATTGACATGTAGAC+GGG + chr7_2:75086495-75086514 Msa1076560:three_prime_UTR 40.0%
GTGCGAAGGTAAACCTTGTT+TGG - chr7_2:75079330-75079349 None:intergenic 45.0%
! AGGTGGTTGTTGTTGGTTGA+AGG - chr7_2:75079476-75079495 None:intergenic 45.0%
AAAATCGAAAGGAACGGAGG+TGG - chr7_2:75079493-75079512 None:intergenic 45.0%
CTGAAAATCGAAAGGAACGG+AGG - chr7_2:75079496-75079515 None:intergenic 45.0%
!! AGCCATTTTGTCTCACGAGA+TGG + chr7_2:75079798-75079817 Msa1076560:intron 45.0%
! AGCTTTTGCCTCAGTGATTC+TGG - chr7_2:75080069-75080088 None:intergenic 45.0%
CCGGCCCCAAATTATTGAAT+TGG - chr7_2:75080589-75080608 None:intergenic 45.0%
AACAAACCCCATTGCATCTG+TGG + chr7_2:75080867-75080886 Msa1076560:five_prime_UTR 45.0%
TTACTGCCACAGATGCAATG+GGG - chr7_2:75080876-75080895 None:intergenic 45.0%
CTTACTGCCACAGATGCAAT+GGG - chr7_2:75080877-75080896 None:intergenic 45.0%
ACTTACTGCCACAGATGCAA+TGG - chr7_2:75080878-75080897 None:intergenic 45.0%
AAAGACTTTCCGGAACGGTA+CGG - chr7_2:75081561-75081580 None:intergenic 45.0%
CGTGACACGAAAACAAAAGG+TGG + chr7_2:75081759-75081778 Msa1076560:intron 45.0%
! TGCGCTGATCTTGTATTCTG+TGG + chr7_2:75082004-75082023 Msa1076560:intron 45.0%
CGTGTGTTGGAATAGAGTGA+AGG + chr7_2:75082456-75082475 Msa1076560:CDS 45.0%
CAGGTTCAAATGCAACATCC+TGG - chr7_2:75082581-75082600 None:intergenic 45.0%
TTGGATAAGCCACAAGAGCT+TGG - chr7_2:75082604-75082623 None:intergenic 45.0%
GCTTTGTGACTTGAAGGATG+GGG + chr7_2:75083269-75083288 Msa1076560:CDS 45.0%
GTTTGTTTCCTTCCTGAAGC+AGG + chr7_2:75083395-75083414 Msa1076560:CDS 45.0%
ATGTTGGAGAGGTTCCATAG+AGG - chr7_2:75083582-75083601 None:intergenic 45.0%
CTATGGAACCTCTCCAACAT+TGG + chr7_2:75083582-75083601 Msa1076560:intron 45.0%
CAAATCTCCCAATGTTGGAG+AGG - chr7_2:75083593-75083612 None:intergenic 45.0%
CTCTCCAACATTGGGAGATT+TGG + chr7_2:75083591-75083610 Msa1076560:intron 45.0%
TCCAACATTGGGAGATTTGG+AGG + chr7_2:75083594-75083613 Msa1076560:intron 45.0%
CCAACATTGGGAGATTTGGA+GGG + chr7_2:75083595-75083614 Msa1076560:intron 45.0%
CAACATTGGGAGATTTGGAG+GGG + chr7_2:75083596-75083615 Msa1076560:intron 45.0%
TGGTTCAAAGGAGGGGAAAA+GGG - chr7_2:75083826-75083845 None:intergenic 45.0%
TTGGTTCAAAGGAGGGGAAA+AGG - chr7_2:75083827-75083846 None:intergenic 45.0%
! GGGTTTGTTTGGTTCAAAGG+AGG - chr7_2:75083835-75083854 None:intergenic 45.0%
TGGAATCTCTCCCTTGTTCA+AGG - chr7_2:75084028-75084047 None:intergenic 45.0%
AAGGGAGAGATTCCATCAAC+AGG + chr7_2:75084033-75084052 Msa1076560:CDS 45.0%
TCCATCAACAGGTTCTCTTG+TGG + chr7_2:75084044-75084063 Msa1076560:CDS 45.0%
TCCACAAGAGAACCTGTTGA+TGG - chr7_2:75084048-75084067 None:intergenic 45.0%
CAGTGAAAAGATGGCCACAT+TGG + chr7_2:75084110-75084129 Msa1076560:CDS 45.0%
TCTTCAAGCTTCCCATGACA+TGG + chr7_2:75084155-75084174 Msa1076560:CDS 45.0%
TTGCTGATCGAATGCTTGCA+TGG - chr7_2:75084193-75084212 None:intergenic 45.0%
CTGACTTCTTAGCATGGTGA+CGG - chr7_2:75084224-75084243 None:intergenic 45.0%
TAAGAAGTCAGTCACGCAAC+TGG + chr7_2:75084233-75084252 Msa1076560:CDS 45.0%
TTGTTGCTAGTGTCTTGCGT+AGG + chr7_2:75084476-75084495 Msa1076560:intron 45.0%
TGTTGCTAGTGTCTTGCGTA+GGG + chr7_2:75084477-75084496 Msa1076560:intron 45.0%
GAAGCTTGAGAACTTGAAGC+TGG - chr7_2:75084883-75084902 None:intergenic 45.0%
!!! CCCTCGTAGTTTGCTTTTGA+AGG - chr7_2:75084974-75084993 None:intergenic 45.0%
CCAACCAATTGAAAAGCCTG+TGG - chr7_2:75085185-75085204 None:intergenic 45.0%
! CCACAGGCTTTTCAATTGGT+TGG + chr7_2:75085182-75085201 Msa1076560:CDS 45.0%
! CAGGCTTTTCAATTGGTTGG+TGG + chr7_2:75085185-75085204 Msa1076560:CDS 45.0%
ACCTGTCAAGATCAAGGACT+GGG - chr7_2:75085395-75085414 None:intergenic 45.0%
TACCTGTCAAGATCAAGGAC+TGG - chr7_2:75085396-75085415 None:intergenic 45.0%
! GGGACTAAATCCCTTGCTAT+AGG - chr7_2:75085904-75085923 None:intergenic 45.0%
! TAGGGTCGGCTCAAGTATAT+GGG - chr7_2:75085926-75085945 None:intergenic 45.0%
AAGCTCGCCCAAAGGAATAT+CGG - chr7_2:75086243-75086262 None:intergenic 45.0%
TGCTTGCAACAGAACTAGGT+AGG - chr7_2:75086300-75086319 None:intergenic 45.0%
TGTGTGCTTGCAACAGAACT+AGG - chr7_2:75086304-75086323 None:intergenic 45.0%
GAGACTTGCCAGAATCACTG+AGG + chr7_2:75080058-75080077 Msa1076560:intron 50.0%
CCAGGATCAGGTTCGACAAT+GGG - chr7_2:75080796-75080815 None:intergenic 50.0%
ACCAGGATCAGGTTCGACAA+TGG - chr7_2:75080797-75080816 None:intergenic 50.0%
TCGTCTATCACAGGAAGGCT+TGG + chr7_2:75080828-75080847 Msa1076560:five_prime_UTR 50.0%
TCTATCACAGGAAGGCTTGG+AGG + chr7_2:75080831-75080850 Msa1076560:five_prime_UTR 50.0%
GTAATTGGACCGTACCGTTC+CGG + chr7_2:75081549-75081568 Msa1076560:five_prime_UTR 50.0%
CACTTGCAATGTCCGTGTGT+TGG + chr7_2:75082443-75082462 Msa1076560:exon 50.0%
!!! TTGCTGGCTTTTATAGGGCC+AGG + chr7_2:75082560-75082579 Msa1076560:intron 50.0%
TTGAACCTGCCAAGCTCTTG+TGG + chr7_2:75082592-75082611 Msa1076560:CDS 50.0%
ATAAGCCACAAGAGCTTGGC+AGG - chr7_2:75082600-75082619 None:intergenic 50.0%
!! TGCACTGATTTCCCTTCTGC+AGG - chr7_2:75082781-75082800 None:intergenic 50.0%
TCAAACAGCCACATCTCCAG+CGG + chr7_2:75083241-75083260 Msa1076560:intron 50.0%
! AGTCACAAAGCTTTGTCCGC+TGG - chr7_2:75083260-75083279 None:intergenic 50.0%
TCCTTCCTGAAGCAGGTACT+TGG + chr7_2:75083402-75083421 Msa1076560:intron 50.0%
ACCAAGTACCTGCTTCAGGA+AGG - chr7_2:75083406-75083425 None:intergenic 50.0%
CCCTCCAAATCTCCCAATGT+TGG - chr7_2:75083598-75083617 None:intergenic 50.0%
TCAAAGGAGGGGAAAAGGGA+AGG - chr7_2:75083822-75083841 None:intergenic 50.0%
TGGAAGAGGTAGAGCCAATG+TGG - chr7_2:75084127-75084146 None:intergenic 50.0%
!! TTGGCTCTACCTCTTCCAGA+AGG + chr7_2:75084129-75084148 Msa1076560:CDS 50.0%
GTCACCTCTAGCCATGTCAT+GGG - chr7_2:75084169-75084188 None:intergenic 50.0%
! GCGTGACTGACTTCTTAGCA+TGG - chr7_2:75084230-75084249 None:intergenic 50.0%
GTGAGATGCTCGACCTATGA+AGG + chr7_2:75084526-75084545 Msa1076560:intron 50.0%
GTCCATCATGTCCTCGCAAT+CGG - chr7_2:75084861-75084880 None:intergenic 50.0%
AGCAAACTACGAGGGACGTA+TGG + chr7_2:75084979-75084998 Msa1076560:CDS 50.0%
! AGGGTCGGCTCAAGTATATG+GGG - chr7_2:75085925-75085944 None:intergenic 50.0%
! GTAGGGTCGGCTCAAGTATA+TGG - chr7_2:75085927-75085946 None:intergenic 50.0%
AGAACTAGGTAGGTGCATGC+AGG - chr7_2:75086290-75086309 None:intergenic 50.0%
TCAAGCCACAGAAGCTGTGT+GGG - chr7_2:75086361-75086380 None:intergenic 50.0%
ATCAAGCCACAGAAGCTGTG+TGG - chr7_2:75086362-75086381 None:intergenic 50.0%
GGTTTACCTTCGCACGGACA+AGG + chr7_2:75079335-75079354 Msa1076560:five_prime_UTR 55.0%
TTCGATCCTTGTCCGTGCGA+AGG - chr7_2:75079344-75079363 None:intergenic 55.0%
GGAACGGAGGTGGTTGTTGT+TGG - chr7_2:75079483-75079502 None:intergenic 55.0%
CCCATTGTCGAACCTGATCC+TGG + chr7_2:75080793-75080812 Msa1076560:five_prime_UTR 55.0%
GAACGAGGAGCTAAGGCATG+TGG - chr7_2:75082486-75082505 None:intergenic 55.0%
! AGCTTTGTCCGCTGGAGATG+TGG - chr7_2:75083252-75083271 None:intergenic 55.0%
TTCCATAGAGGTCGAGGTGG+GGG - chr7_2:75083570-75083589 None:intergenic 55.0%
GTTCCATAGAGGTCGAGGTG+GGG - chr7_2:75083571-75083590 None:intergenic 55.0%
GGTTCCATAGAGGTCGAGGT+GGG - chr7_2:75083572-75083591 None:intergenic 55.0%
AGGTTCCATAGAGGTCGAGG+TGG - chr7_2:75083573-75083592 None:intergenic 55.0%
GAGAGGTTCCATAGAGGTCG+AGG - chr7_2:75083576-75083595 None:intergenic 55.0%
TTGATTGAGAGGGAGGGGAG+AGG - chr7_2:75083779-75083798 None:intergenic 55.0%
GCTTCCCATGACATGGCTAG+AGG + chr7_2:75084162-75084181 Msa1076560:CDS 55.0%
CGTCACCTCTAGCCATGTCA+TGG - chr7_2:75084170-75084189 None:intergenic 55.0%
! CACCGATTGCGAGGACATGA+TGG + chr7_2:75084856-75084875 Msa1076560:CDS 55.0%
CTACGAGGGACGTATGGCAA+AGG + chr7_2:75084985-75085004 Msa1076560:CDS 55.0%
AGGGACGTATGGCAAAGGTC+TGG + chr7_2:75084990-75085009 Msa1076560:intron 55.0%
TTTCTCCCTCGTCACGGTTG+TGG + chr7_2:75085209-75085228 Msa1076560:CDS 55.0%
GCCCAGTCCTTGATCTTGAC+AGG + chr7_2:75085391-75085410 Msa1076560:CDS 55.0%
! GGGTCGGCTCAAGTATATGG+GGG - chr7_2:75085924-75085943 None:intergenic 55.0%
!! TGCAGATGGGCTATCCCACT+TGG + chr7_2:75086062-75086081 Msa1076560:intron 55.0%
CATCTCCCACACAGCTTCTG+TGG + chr7_2:75086353-75086372 Msa1076560:three_prime_UTR 55.0%
ATCCCCCACCTCGACCTCTA+TGG + chr7_2:75083565-75083584 Msa1076560:intron 60.0%
! GGCACTGTACACCGATTGCG+AGG + chr7_2:75084847-75084866 Msa1076560:CDS 60.0%
GGTGGCTTTCTCCCTCGTCA+CGG + chr7_2:75085203-75085222 Msa1076560:CDS 60.0%
TCCCTCGTCACGGTTGTGGT+TGG + chr7_2:75085213-75085232 Msa1076560:CDS 60.0%
GCCAACCACAACCGTGACGA+GGG - chr7_2:75085217-75085236 None:intergenic 60.0%
TCGTCACGGTTGTGGTTGGC+CGG + chr7_2:75085217-75085236 Msa1076560:CDS 60.0%
TGTTGGCGGGGCCTATAGCA+AGG + chr7_2:75085890-75085909 Msa1076560:intron 60.0%
GTTGGCGGGGCCTATAGCAA+GGG + chr7_2:75085891-75085910 Msa1076560:intron 60.0%
GGCCAACCACAACCGTGACG+AGG - chr7_2:75085218-75085237 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 75079302 75086650 75079302 ID=Msa1076560;Name=Msa1076560
chr7_2 mRNA 75079302 75086650 75079302 ID=Msa1076560-mRNA-1;Parent=Msa1076560;Name=Msa1076560-mRNA-1;_AED=0.15;_eAED=0.15;_QI=943|1|1|1|0.93|0.87|16|451|425
chr7_2 exon 75079302 75079633 75079302 ID=Msa1076560-mRNA-1:exon:17760;Parent=Msa1076560-mRNA-1
chr7_2 exon 75080789 75080891 75080789 ID=Msa1076560-mRNA-1:exon:17761;Parent=Msa1076560-mRNA-1
chr7_2 exon 75081549 75081618 75081549 ID=Msa1076560-mRNA-1:exon:17762;Parent=Msa1076560-mRNA-1
chr7_2 exon 75081739 75081777 75081739 ID=Msa1076560-mRNA-1:exon:17763;Parent=Msa1076560-mRNA-1
chr7_2 exon 75081879 75081996 75081879 ID=Msa1076560-mRNA-1:exon:17764;Parent=Msa1076560-mRNA-1
chr7_2 exon 75082087 75082144 75082087 ID=Msa1076560-mRNA-1:exon:17765;Parent=Msa1076560-mRNA-1
chr7_2 exon 75082228 75082477 75082228 ID=Msa1076560-mRNA-1:exon:17766;Parent=Msa1076560-mRNA-1
chr7_2 exon 75082576 75082636 75082576 ID=Msa1076560-mRNA-1:exon:17767;Parent=Msa1076560-mRNA-1
chr7_2 exon 75082785 75082844 75082785 ID=Msa1076560-mRNA-1:exon:17768;Parent=Msa1076560-mRNA-1
chr7_2 exon 75082931 75082950 75082931 ID=Msa1076560-mRNA-1:exon:17769;Parent=Msa1076560-mRNA-1
chr7_2 exon 75083043 75083108 75083043 ID=Msa1076560-mRNA-1:exon:17770;Parent=Msa1076560-mRNA-1
chr7_2 exon 75083249 75083416 75083249 ID=Msa1076560-mRNA-1:exon:17771;Parent=Msa1076560-mRNA-1
chr7_2 exon 75084015 75084272 75084015 ID=Msa1076560-mRNA-1:exon:17772;Parent=Msa1076560-mRNA-1
chr7_2 exon 75084794 75085006 75084794 ID=Msa1076560-mRNA-1:exon:17773;Parent=Msa1076560-mRNA-1
chr7_2 exon 75085141 75085412 75085141 ID=Msa1076560-mRNA-1:exon:17774;Parent=Msa1076560-mRNA-1
chr7_2 exon 75086067 75086650 75086067 ID=Msa1076560-mRNA-1:exon:17775;Parent=Msa1076560-mRNA-1
chr7_2 five_prime_UTR 75079302 75079633 75079302 ID=Msa1076560-mRNA-1:five_prime_utr;Parent=Msa1076560-mRNA-1
chr7_2 five_prime_UTR 75080789 75080891 75080789 ID=Msa1076560-mRNA-1:five_prime_utr;Parent=Msa1076560-mRNA-1
chr7_2 five_prime_UTR 75081549 75081618 75081549 ID=Msa1076560-mRNA-1:five_prime_utr;Parent=Msa1076560-mRNA-1
chr7_2 five_prime_UTR 75081739 75081777 75081739 ID=Msa1076560-mRNA-1:five_prime_utr;Parent=Msa1076560-mRNA-1
chr7_2 five_prime_UTR 75081879 75081996 75081879 ID=Msa1076560-mRNA-1:five_prime_utr;Parent=Msa1076560-mRNA-1
chr7_2 five_prime_UTR 75082087 75082144 75082087 ID=Msa1076560-mRNA-1:five_prime_utr;Parent=Msa1076560-mRNA-1
chr7_2 five_prime_UTR 75082228 75082450 75082228 ID=Msa1076560-mRNA-1:five_prime_utr;Parent=Msa1076560-mRNA-1
chr7_2 CDS 75082451 75082477 75082451 ID=Msa1076560-mRNA-1:cds;Parent=Msa1076560-mRNA-1
chr7_2 CDS 75082576 75082636 75082576 ID=Msa1076560-mRNA-1:cds;Parent=Msa1076560-mRNA-1
chr7_2 CDS 75082785 75082844 75082785 ID=Msa1076560-mRNA-1:cds;Parent=Msa1076560-mRNA-1
chr7_2 CDS 75082931 75082950 75082931 ID=Msa1076560-mRNA-1:cds;Parent=Msa1076560-mRNA-1
chr7_2 CDS 75083043 75083108 75083043 ID=Msa1076560-mRNA-1:cds;Parent=Msa1076560-mRNA-1
chr7_2 CDS 75083249 75083416 75083249 ID=Msa1076560-mRNA-1:cds;Parent=Msa1076560-mRNA-1
chr7_2 CDS 75084015 75084272 75084015 ID=Msa1076560-mRNA-1:cds;Parent=Msa1076560-mRNA-1
chr7_2 CDS 75084794 75085006 75084794 ID=Msa1076560-mRNA-1:cds;Parent=Msa1076560-mRNA-1
chr7_2 CDS 75085141 75085412 75085141 ID=Msa1076560-mRNA-1:cds;Parent=Msa1076560-mRNA-1
chr7_2 CDS 75086067 75086199 75086067 ID=Msa1076560-mRNA-1:cds;Parent=Msa1076560-mRNA-1
chr7_2 three_prime_UTR 75086200 75086650 75086200 ID=Msa1076560-mRNA-1:three_prime_utr;Parent=Msa1076560-mRNA-1
Gene Sequence

>Msa1076560

ATGTCCGTGTGTTGGAATAGAGTGAAGGGCCAGGATGTTGCATTTGAACCTGCCAAGCTCTTGTGGCTTATCCAACGTGATTTTCTGCAAGGGAAATCAGTGCAACAAATGGTGGATGAAGCTCTTCGACAAGTCCCTAATAAAGATAGAGACAGAAATATTGATATGATCAATCAAATTCGGGATTCATTGGCTATTATGGGTGACAATAGTACGGCCTTTAGCTTACCACAACCACATCTCCAGCGGACAAAGCTTTGTGACTTGAAGGATGGGGAGCTTGATCCATCATATGTGAAGAAAAGGGAGAAGCTAAAAGAGCTTGTTTCTAGTATAATCCGTCCAAAGATTGTACAAGGAAAATCTCTAAATGGGAAAGAGTTTGTTTCCTTCCTGAAGCAGATACTTGAAGCCTTGAACAAGGGAGAGATTCCATCAACAGGTTCTCTTGTGGAGATTTTCAACAAGGACATTCTTGAAAGATGTCTTAAGTTATACAGTGAAAAGATGGCCACATTGGCTCTACCTCTTCCAGAAGGATATCTTCAAGCTTCCCATGACATGGCTAGAGGTGACGCCATGCAAGCATTCGATCAGCAACATTTTGGCCGTCACCATGCTAAGAAGTCAGTCACGCAACTGGATGAAGAAATAGATAAGGTATTTAAGAATGTCATTTTACAAAATGAATATAAATCTTCAAAGCTTTGTGAGGCACTGTACACCGATTGCGAGGACATGATGGACCAGCTTCAAGTTCTCAAGCTTCCTTCAATGGCAAAATTTAATGCAGGTCTCGAGAAATGCAATCGTACTTTTGAGCATGATTGTGTTGGACCTTCAAAAGCAAACTACGAGGGACGTATGGCAAAGATGTTGGTAAAGTCTAAGTCTCTATTTATAAAGGAGTACAACCACAGGCTTTTCAATTGGTTGGTGGCTTTCTCCCTCGTCACGGTTGTGGTTGGCCGGTTTATTATAAAGTTCATTTTGATTGAAATTGGAGGATGGTTACTTTTTATATTTCTGGAGACCTACACAAGGTTGTTTTGGTCAGCAGAGTCACTTTACTACAATCCAGTTTGGCATTTTATAGTTGCATCGTGGGAAACTCTTGTTTACAGCCCAGTCCTTGATCTTGACAGATGGGCTATCCCACTTGGTGTAATAATATCTTTTTTCATTCTATATTGGCGGTGTTATGGGAAAAAGAAACATGGATCACGGTGGCTATTACCATTATATAGCAGCAATAAAAATAGACCAAGAACAGACTAA

Protein sequence

>Msa1076560

MSVCWNRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVDEALRQVPNKDRDRNIDMINQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDLKDGELDPSYVKKREKLKELVSSIIRPKIVQGKSLNGKEFVSFLKQILEALNKGEIPSTGSLVEIFNKDILERCLKLYSEKMATLALPLPEGYLQASHDMARGDAMQAFDQQHFGRHHAKKSVTQLDEEIDKVFKNVILQNEYKSSKLCEALYTDCEDMMDQLQVLKLPSMAKFNAGLEKCNRTFEHDCVGPSKANYEGRMAKMLVKSKSLFIKEYNHRLFNWLVAFSLVTVVVGRFIIKFILIEIGGWLLFIFLETYTRLFWSAESLYYNPVWHFIVASWETLVYSPVLDLDRWAIPLGVIISFFILYWRCYGKKKHGSRWLLPLYSSNKNRPRTD*