Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702410 | XP_003629947.1 | 93.243 | 444 | 2 | 1 | 1 | 416 | 1 | 444 | 0.0 | 841 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702410 | sp|Q96254|GDI1_ARATH | 81.081 | 444 | 56 | 1 | 1 | 416 | 1 | 444 | 0.0 | 739 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702410 | G7L8T3 | 93.243 | 444 | 2 | 1 | 1 | 416 | 1 | 444 | 0.0 | 841 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030700 | Msa0702410 | 0.821145 | 4.718561e-53 | -8.615850e-47 |
| Msa0078120 | Msa0702410 | 0.826526 | 2.584614e-54 | -8.615850e-47 |
| Msa0089980 | Msa0702410 | 0.805929 | 1.052815e-49 | -8.615850e-47 |
| Msa0090010 | Msa0702410 | 0.806065 | 9.856942e-50 | -8.615850e-47 |
| Msa0105410 | Msa0702410 | 0.818592 | 1.808632e-52 | -8.615850e-47 |
| Msa0610690 | Msa0702410 | 0.804602 | 1.997007e-49 | -8.615850e-47 |
| Msa0615840 | Msa0702410 | 0.808149 | 3.568339e-50 | -8.615850e-47 |
| Msa0657710 | Msa0702410 | 0.803375 | 3.592383e-49 | -8.615850e-47 |
| Msa0657720 | Msa0702410 | 0.815776 | 7.774993e-52 | -8.615850e-47 |
| Msa0658580 | Msa0702410 | 0.818771 | 1.646851e-52 | -8.615850e-47 |
| Msa0673120 | Msa0702410 | 0.818388 | 2.012394e-52 | -8.615850e-47 |
| Msa0698910 | Msa0702410 | 0.819631 | 1.049610e-52 | -8.615850e-47 |
| Msa0702410 | Msa0702720 | 0.852686 | 3.921657e-61 | -8.615850e-47 |
| Msa0702410 | Msa0702790 | 0.804685 | 1.918793e-49 | -8.615850e-47 |
| Msa0702410 | Msa0702800 | 0.807012 | 6.222727e-50 | -8.615850e-47 |
| Msa0702410 | Msa0703540 | 0.821431 | 4.052109e-53 | -8.615850e-47 |
| Msa0702410 | Msa0703800 | 0.841694 | 4.067746e-58 | -8.615850e-47 |
| Msa0702410 | Msa0706230 | 0.801061 | 1.075335e-48 | -8.615850e-47 |
| Msa0702410 | Msa0828950 | 0.804229 | 2.388062e-49 | -8.615850e-47 |
| Msa0702410 | Msa0828960 | 0.809581 | 1.762979e-50 | -8.615850e-47 |
| Msa0702410 | Msa0879930 | 0.803438 | 3.486290e-49 | -8.615850e-47 |
| Msa0702410 | Msa0910960 | 0.827566 | 1.457245e-54 | -8.615850e-47 |
| Msa0702410 | Msa0965290 | 0.803769 | 2.976135e-49 | -8.615850e-47 |
| Msa0702410 | Msa0992510 | 0.852943 | 3.311785e-61 | -8.615850e-47 |
| Msa0702410 | Msa0999680 | 0.801797 | 7.599907e-49 | -8.615850e-47 |
| Msa0702410 | Msa1012710 | 0.807368 | 5.229869e-50 | -8.615850e-47 |
| Msa0702410 | Msa1012800 | 0.808752 | 2.653321e-50 | -8.615850e-47 |
| Msa0702410 | Msa1039100 | 0.824608 | 7.360939e-54 | -8.615850e-47 |
| Msa0702410 | Msa1047760 | 0.818312 | 2.093282e-52 | -8.615850e-47 |
| Msa0702410 | Msa1132470 | 0.832099 | 1.146593e-55 | -8.615850e-47 |
| Msa0702410 | Msa1184230 | 0.813058 | 3.102405e-51 | -8.615850e-47 |
| Msa0702410 | Msa1202800 | 0.845621 | 3.623784e-59 | -8.615850e-47 |
| Msa0702410 | Msa1238600 | 0.834553 | 2.804846e-56 | -8.615850e-47 |
| Msa0702410 | Msa1255210 | 0.854960 | 8.688052e-62 | -8.615850e-47 |
| Msa0702410 | Msa1255690 | 0.801007 | 1.103072e-48 | -8.615850e-47 |
| Msa0702410 | Msa1295650 | 0.850542 | 1.587382e-60 | -8.615850e-47 |
| Msa0702410 | Msa1341840 | 0.856128 | 3.964968e-62 | -8.615850e-47 |
| Msa0702410 | Msa1407750 | 0.832687 | 8.199207e-56 | -8.615850e-47 |
| Msa0702410 | Msa1442920 | 0.803176 | 3.950141e-49 | -8.615850e-47 |
| Msa0702410 | Msa1452710 | 0.806638 | 7.463804e-50 | -8.615850e-47 |
| Msa0702410 | Msa1461370 | 0.842918 | 1.927969e-58 | -8.615850e-47 |
| Msa0152850 | Msa0702410 | 0.823948 | 1.052274e-53 | -8.615850e-47 |
| Msa0345050 | Msa0702410 | 0.819783 | 9.687745e-53 | -8.615850e-47 |
| Msa0567120 | Msa0702410 | 0.802352 | 5.843162e-49 | -8.615850e-47 |
| Msa0567380 | Msa0702410 | 0.814581 | 1.432387e-51 | -8.615850e-47 |
| Msa0576790 | Msa0702410 | 0.801778 | 7.668993e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702410 | MtrunA17_Chr8g0380591 | 93.243 | 444 | 2 | 1 | 1 | 416 | 1 | 444 | 0.0 | 841 |
| Msa0702410 | MtrunA17_Chr4g0049891 | 76.835 | 436 | 73 | 1 | 1 | 408 | 1 | 436 | 0.0 | 693 |
| Msa0702410 | MtrunA17_Chr5g0406991 | 27.575 | 301 | 182 | 10 | 59 | 328 | 140 | 435 | 4.22e-18 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702410 | AT2G44100.1 | 81.081 | 444 | 56 | 1 | 1 | 416 | 1 | 444 | 0.0 | 739 |
| Msa0702410 | AT3G59920.1 | 80.856 | 444 | 57 | 1 | 1 | 416 | 1 | 444 | 0.0 | 736 |
| Msa0702410 | AT2G44100.2 | 80.930 | 430 | 54 | 1 | 1 | 402 | 1 | 430 | 0.0 | 717 |
| Msa0702410 | AT5G09550.1 | 75.676 | 444 | 80 | 1 | 1 | 416 | 1 | 444 | 0.0 | 699 |
| Msa0702410 | AT3G06540.1 | 24.688 | 320 | 198 | 12 | 59 | 338 | 137 | 453 | 1.51e-16 | 82.0 |
Find 126 sgRNAs with CRISPR-Local
Find 477 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGACACGACAACTATTTA+TGG | 0.160220 | 4_4:-74052010 | Msa0702410:three_prime_UTR |
| TAGCTTTATTTGTTTAATTT+TGG | 0.161390 | 4_4:-74052107 | Msa0702410:three_prime_UTR |
| TTGACCCATGACAGAAAATT+TGG | 0.184972 | 4_4:-74057665 | Msa0702410:intron |
| CACTTCCCTTAATCTTATTC+AGG | 0.214984 | 4_4:-74059069 | Msa0702410:intron |
| GATGATCAAGGAAAGGTTAT+TGG | 0.226106 | 4_4:-74055979 | Msa0702410:CDS |
| GGCTTTGAAGTCCCCACTTA+TGG | 0.233527 | 4_4:-74058280 | Msa0702410:CDS |
| TTTGGGTGTTTAGTTCATTA+TGG | 0.255862 | 4_4:-74058545 | Msa0702410:intron |
| GCACGGCTTAGCGCTGTTTA+TGG | 0.259796 | 4_4:-74057198 | Msa0702410:CDS |
| AGTATATCTACCTTGCATTC+AGG | 0.307677 | 4_4:+74057153 | None:intergenic |
| AACATGTATACGTTGATAAC+TGG | 0.312028 | 4_4:-74052999 | Msa0702410:CDS |
| TTGATTTGATTTGATTTGAT+TGG | 0.316302 | 4_4:+74059358 | None:intergenic |
| CCAGGTTTCAGTTCAATTGC+AGG | 0.316392 | 4_4:+74053247 | None:intergenic |
| AGAATACGATGTAATCGTTC+TGG | 0.319703 | 4_4:-74059279 | Msa0702410:CDS |
| ATATATCCTTTGTATGGTTT+AGG | 0.331062 | 4_4:-74057358 | Msa0702410:CDS |
| AAACCTGGAATTGACCTTCT+AGG | 0.335092 | 4_4:-74053232 | Msa0702410:CDS |
| TCGTTGTAAAGTGCAAAGTA+TGG | 0.345660 | 4_4:+74052304 | None:intergenic |
| TGTAGAACAGATTTGTTTGC+AGG | 0.358078 | 4_4:-74052214 | Msa0702410:three_prime_UTR |
| GGACTTCATTGGTCATGCTT+TGG | 0.364793 | 4_4:-74057624 | Msa0702410:CDS |
| GATTGGGAGTCATTGGTGTT+GGG | 0.368885 | 4_4:+74055574 | None:intergenic |
| TCTAGGGTGGGTTCATTGAC+TGG | 0.390022 | 4_4:+74053166 | None:intergenic |
| TATTCTCCCACAAAAGCAAC+TGG | 0.403427 | 4_4:-74055542 | Msa0702410:CDS |
| GCTTTGAAGTCCCCACTTAT+GGG | 0.406357 | 4_4:-74058279 | Msa0702410:CDS |
| GAGTCTCTTGCACGATTTCA+AGG | 0.410458 | 4_4:-74057394 | Msa0702410:CDS |
| ATTACGCACAAGCGAGCATC+TGG | 0.410887 | 4_4:+74052176 | None:intergenic |
| CCTTACATATATCCTTTGTA+TGG | 0.411629 | 4_4:-74057364 | Msa0702410:CDS |
| TCTTTACTCTTCTGCAGCAC+TGG | 0.413041 | 4_4:+74052373 | None:intergenic |
| ACATTTAACAAACGAGCAAT+TGG | 0.419428 | 4_4:+74052053 | None:intergenic |
| TGACTTACATGTCTGACTTT+CGG | 0.427909 | 4_4:+74055518 | None:intergenic |
| CTGCGATCTCCGATCGAAGA+TGG | 0.428438 | 4_4:-74059306 | Msa0702410:exon |
| CGATTGGGAGTCATTGGTGT+TGG | 0.428832 | 4_4:+74055573 | None:intergenic |
| ACCTTGTTGGTCAAGTATGA+TGG | 0.428877 | 4_4:+74055907 | None:intergenic |
| GGTCCTAGAAGGTCAATTCC+AGG | 0.437493 | 4_4:+74053229 | None:intergenic |
| CTGAATAAGATTAAGGGAAG+TGG | 0.439368 | 4_4:+74059070 | None:intergenic |
| AAAGCCTCCATGTCATTTGA+AGG | 0.440668 | 4_4:+74058297 | None:intergenic |
| TCTCACAATGTTTGCCCAAA+GGG | 0.442192 | 4_4:-74053313 | Msa0702410:CDS |
| TTGCACCGATTGGGAGTCAT+TGG | 0.442455 | 4_4:+74055567 | None:intergenic |
| TCGAAATAAAGCAGTTGTCT+AGG | 0.450436 | 4_4:+74053149 | None:intergenic |
| CCTGCAATTGAACTGAAACC+TGG | 0.453263 | 4_4:-74053247 | Msa0702410:CDS |
| GAGTCATTGGTGTTGGGGAT+CGG | 0.454805 | 4_4:+74055580 | None:intergenic |
| CTCTTCACAGTGTCTAGTGC+TGG | 0.455178 | 4_4:+74057569 | None:intergenic |
| AAGACACGACAACTATTTAT+GGG | 0.459161 | 4_4:-74052009 | Msa0702410:three_prime_UTR |
| GATAACACTGTGGACTTCAT+TGG | 0.464458 | 4_4:-74057635 | Msa0702410:CDS |
| GAGAATAACTTGCACCGATT+GGG | 0.465079 | 4_4:+74055558 | None:intergenic |
| GATGTAATCGTTCTGGGAAC+TGG | 0.470059 | 4_4:-74059272 | Msa0702410:CDS |
| TTCAGACTGCTTCTTCTACT+CGG | 0.478139 | 4_4:+74059422 | None:intergenic |
| ATGGATAGAAATGATTATTA+CGG | 0.478912 | 4_4:-74059101 | Msa0702410:CDS |
| GTGTTGCTAACTTGTGCTCC+TGG | 0.481357 | 4_4:-74051960 | Msa0702410:three_prime_UTR |
| TCTCATCAACAGGTCCTAGA+AGG | 0.482856 | 4_4:+74053218 | None:intergenic |
| TTTCAAATATTCCCATAAGT+GGG | 0.483406 | 4_4:+74058268 | None:intergenic |
| GGAGAATAACTTGCACCGAT+TGG | 0.484322 | 4_4:+74055557 | None:intergenic |
| ATCGGAGATCGCAGTCGAAA+GGG | 0.491725 | 4_4:+74059315 | None:intergenic |
| GAATACGATGTAATCGTTCT+GGG | 0.496229 | 4_4:-74059278 | Msa0702410:CDS |
| CGAAATAAAGCAGTTGTCTA+GGG | 0.502383 | 4_4:+74053150 | None:intergenic |
| CTCTATTTCAAAGCTGTGGA+TGG | 0.502434 | 4_4:-74058472 | Msa0702410:CDS |
| TCACTTTGAATCAACAGTAC+TGG | 0.502679 | 4_4:-74053030 | Msa0702410:CDS |
| GTTATTGGCGTCACGTCTGA+AGG | 0.507245 | 4_4:-74055964 | Msa0702410:CDS |
| GTTTAGTTCATTATGGCCAA+TGG | 0.508001 | 4_4:-74058538 | Msa0702410:intron |
| CAGGTGGAATTTGATGATCA+AGG | 0.509665 | 4_4:-74055991 | Msa0702410:CDS |
| CCATACAAAGGATATATGTA+AGG | 0.512388 | 4_4:+74057364 | None:intergenic |
| AGTGGTCTTCTCTCCGTCGA+TGG | 0.517094 | 4_4:-74059230 | Msa0702410:CDS |
| AACCCTCACTAATGTGCCAT+TGG | 0.520084 | 4_4:+74058522 | None:intergenic |
| ACCATTTCAACAGGTGAGGA+AGG | 0.530785 | 4_4:-74055641 | Msa0702410:intron |
| TTTCAACAGGTGAGGAAGGT+TGG | 0.530894 | 4_4:-74055637 | Msa0702410:intron |
| GATCGGAGATCGCAGTCGAA+AGG | 0.536746 | 4_4:+74059314 | None:intergenic |
| GCTGATCCTAAAACTCATGA+TGG | 0.539416 | 4_4:-74058198 | Msa0702410:CDS |
| TCCTAAAACTCATGATGGGA+TGG | 0.544577 | 4_4:-74058193 | Msa0702410:CDS |
| ACAGGTGAGGAAGGTTGGTA+AGG | 0.545562 | 4_4:-74055632 | Msa0702410:intron |
| TTCTCACAATGTTTGCCCAA+AGG | 0.554054 | 4_4:-74053314 | Msa0702410:CDS |
| TGGTTTAGGAGAGCTTCCTC+AGG | 0.555597 | 4_4:-74057344 | Msa0702410:intron |
| GTTGAATAAACCTGAATGCA+AGG | 0.558302 | 4_4:-74057163 | Msa0702410:intron |
| ATTGGGAGTCATTGGTGTTG+GGG | 0.558324 | 4_4:+74055575 | None:intergenic |
| GAGAATACGAGCAACAGAAT+AGG | 0.558919 | 4_4:+74053332 | None:intergenic |
| TATTGGTACAGGCATTTGCA+CGG | 0.559199 | 4_4:-74057215 | Msa0702410:intron |
| CATTGGTGTTGGGGATCGGA+TGG | 0.560062 | 4_4:+74055584 | None:intergenic |
| CAAGGTACCTTCAAATGACA+TGG | 0.560179 | 4_4:-74058304 | Msa0702410:CDS |
| GGAAGGTTGGTAAGGTTGCA+AGG | 0.561162 | 4_4:-74055624 | Msa0702410:CDS |
| AGTCTCTTGCACGATTTCAA+GGG | 0.561340 | 4_4:-74057393 | Msa0702410:CDS |
| CGGCTTAGCGCTGTTTATGG+AGG | 0.561599 | 4_4:-74057195 | Msa0702410:CDS |
| AATTGCTTAAAGAGTGCACC+AGG | 0.561913 | 4_4:+74051942 | None:intergenic |
| GGAATTTGATGATCAAGGAA+AGG | 0.566365 | 4_4:-74055986 | Msa0702410:CDS |
| TTCAAATATTCCCATAAGTG+GGG | 0.568438 | 4_4:+74058269 | None:intergenic |
| TTATGTTCAAGATTATAATG+AGG | 0.568766 | 4_4:-74058220 | Msa0702410:CDS |
| CTTGACAAGAGTCACTACTA+AGG | 0.569477 | 4_4:-74058169 | Msa0702410:CDS |
| CTTTGTCTTTAACAAAGCAA+AGG | 0.569984 | 4_4:-74058446 | Msa0702410:intron |
| TGGCCAATGGCACATTAGTG+AGG | 0.571838 | 4_4:-74058525 | Msa0702410:CDS |
| AATAAAGCAGTTGTCTAGGG+TGG | 0.573026 | 4_4:+74053153 | None:intergenic |
| GTATCTCTATTTCAAAGCTG+TGG | 0.574401 | 4_4:-74058476 | Msa0702410:CDS |
| GTCTCTTGCACGATTTCAAG+GGG | 0.577654 | 4_4:-74057392 | Msa0702410:CDS |
| GTAGAACAGATTTGTTTGCA+GGG | 0.578944 | 4_4:-74052213 | Msa0702410:three_prime_UTR |
| CAACACCAATGACTCCCAAT+CGG | 0.583889 | 4_4:-74055572 | Msa0702410:CDS |
| ACGCACAAGCGAGCATCTGG+AGG | 0.583998 | 4_4:+74052179 | None:intergenic |
| AGTCCACAGTGTTATCATCA+AGG | 0.587304 | 4_4:+74057642 | None:intergenic |
| CGCACAAGCGAGCATCTGGA+GGG | 0.587744 | 4_4:+74052180 | None:intergenic |
| GGCCAATGGCACATTAGTGA+GGG | 0.588085 | 4_4:-74058524 | Msa0702410:CDS |
| GGTTACTTTGAGGCCATCGA+CGG | 0.588114 | 4_4:+74059217 | None:intergenic |
| CTGATCCTAAAACTCATGAT+GGG | 0.593086 | 4_4:-74058197 | Msa0702410:CDS |
| GAGTAGAAGAAGCAGTCTGA+AGG | 0.594056 | 4_4:-74059420 | Msa0702410:five_prime_UTR |
| TGTCTGTTATGTGTTGCCGA+TGG | 0.594973 | 4_4:-74052330 | Msa0702410:three_prime_UTR |
| TACTGTTGATTCAAAGTGAG+TGG | 0.602582 | 4_4:+74053034 | None:intergenic |
| GAAGGTTGGTAAGGTTGCAA+GGG | 0.604709 | 4_4:-74055623 | Msa0702410:CDS |
| ATAAAGCAGTTGTCTAGGGT+GGG | 0.607677 | 4_4:+74053154 | None:intergenic |
| TTATTGGCGTCACGTCTGAA+GGG | 0.608673 | 4_4:-74055963 | Msa0702410:CDS |
| GGGGATCGGATGGCTCATGA+TGG | 0.613814 | 4_4:+74055594 | None:intergenic |
| ATTCTTCATCCATCTTCGAT+CGG | 0.620407 | 4_4:+74059297 | None:intergenic |
| GTATACGTTGATAACTGGAA+AGG | 0.621367 | 4_4:-74052994 | Msa0702410:intron |
| GATAGAAATGATTATTACGG+AGG | 0.624916 | 4_4:-74059098 | Msa0702410:CDS |
| TCGGAGATCGCAGTCGAAAG+GGG | 0.628674 | 4_4:+74059316 | None:intergenic |
| TTATCAACGTATACATGTTG+AGG | 0.629009 | 4_4:+74053003 | None:intergenic |
| TATTGGCGTCACGTCTGAAG+GGG | 0.631609 | 4_4:-74055962 | Msa0702410:CDS |
| CGGAGATCGCAGTCGAAAGG+GGG | 0.635039 | 4_4:+74059317 | None:intergenic |
| TTACTCTTCTGCAGCACTGG+CGG | 0.636142 | 4_4:+74052376 | None:intergenic |
| GTGCAAAGTATGGATTCCAT+CGG | 0.639245 | 4_4:+74052314 | None:intergenic |
| TTTGTAATAGACTGTTGTTG+AGG | 0.641267 | 4_4:-74059388 | Msa0702410:five_prime_UTR |
| AGACACTGTGAAGAGAATGA+AGG | 0.644888 | 4_4:-74057561 | Msa0702410:intron |
| GCACAAGCGAGCATCTGGAG+GGG | 0.644983 | 4_4:+74052181 | None:intergenic |
| TATTGCATTTGTATCAACTG+AGG | 0.650673 | 4_4:-74053284 | Msa0702410:CDS |
| AGCTCTCCTAAACCATACAA+AGG | 0.658728 | 4_4:+74057352 | None:intergenic |
| ATTCTCCCACAAAAGCAACT+GGG | 0.662559 | 4_4:-74055541 | Msa0702410:CDS |
| GCAACACATAACAGACACAA+AGG | 0.678923 | 4_4:+74052336 | None:intergenic |
| TCCATCATACTTGACCAACA+AGG | 0.680703 | 4_4:-74055908 | Msa0702410:intron |
| CTCAAAGAATGCATTCTCAG+TGG | 0.682881 | 4_4:-74059248 | Msa0702410:CDS |
| GGTACCTTCAAATGACATGG+AGG | 0.738325 | 4_4:-74058301 | Msa0702410:CDS |
| CGGCACTGAGATCCACAGTG+AGG | 0.743753 | 4_4:+74052396 | None:intergenic |
| TCTCTTGCACGATTTCAAGG+GGG | 0.764721 | 4_4:-74057391 | Msa0702410:CDS |
| TGGCCTTGATGATAACACTG+TGG | 0.769317 | 4_4:-74057645 | Msa0702410:CDS |
| ACAGGTTCTAGACCTCACTG+TGG | 0.826301 | 4_4:-74052408 | Msa0702410:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAAAAAATAAATATT+AGG | + | chr4_4:74052837-74052856 | None:intergenic | 0.0% |
| !!! | ATTTATTTTTTTAATTTTTT+TGG | - | chr4_4:74052840-74052859 | Msa0702410:intron | 0.0% |
| !!! | TTTATTTTTTTAATTTTTTT+GGG | - | chr4_4:74052841-74052860 | Msa0702410:intron | 0.0% |
| !!! | TTTTTATTATTTTTTTGCTT+AGG | - | chr4_4:74052271-74052290 | Msa0702410:three_prime_UTR | 10.0% |
| !!! | TTTCTTGTTTTTAATTATTT+CGG | - | chr4_4:74052556-74052575 | Msa0702410:intron | 10.0% |
| !! | AATTAATTAAAGCATAATTT+AGG | + | chr4_4:74056176-74056195 | None:intergenic | 10.0% |
| !!! | CTAAATAATATTTTTAAACT+AGG | + | chr4_4:74056702-74056721 | None:intergenic | 10.0% |
| !! | AAAATAAATGAATAACCTTA+GGG | + | chr4_4:74052531-74052550 | None:intergenic | 15.0% |
| !! | ATAATTAAAAACAAGAAAAG+CGG | + | chr4_4:74052554-74052573 | None:intergenic | 15.0% |
| !! | ATCTATAAATGGAAATATAA+TGG | + | chr4_4:74053309-74053328 | None:intergenic | 15.0% |
| !!! | TAATTTATTTTTTTTACGCT+GGG | + | chr4_4:74054967-74054986 | None:intergenic | 15.0% |
| !!! | TTAATTTATTTTTTTTACGC+TGG | + | chr4_4:74054968-74054987 | None:intergenic | 15.0% |
| !! | ACAATAATAACTATAAAGTA+AGG | + | chr4_4:74055317-74055336 | None:intergenic | 15.0% |
| !! | GAAAAAAAAATTGAAATTAG+TGG | - | chr4_4:74055664-74055683 | Msa0702410:intron | 15.0% |
| !!! | AAGTTAACAATTTTTCTTAA+AGG | - | chr4_4:74056312-74056331 | Msa0702410:intron | 15.0% |
| !!! | AGTTAACAATTTTTCTTAAA+GGG | - | chr4_4:74056313-74056332 | Msa0702410:intron | 15.0% |
| !!! | AATAAATTATCTTTGCATTT+TGG | + | chr4_4:74057943-74057962 | None:intergenic | 15.0% |
| !! | AAAAATAAAACAATGTAACA+AGG | + | chr4_4:74058034-74058053 | None:intergenic | 15.0% |
| !!! | TTGTTTTATTTTTTTTGTCA+TGG | - | chr4_4:74058041-74058060 | Msa0702410:intron | 15.0% |
| !!! | TGTTTTATTTTTTTTGTCAT+GGG | - | chr4_4:74058042-74058061 | Msa0702410:intron | 15.0% |
| !!! | ACATTTTAATAAAAGTGTAT+CGG | + | chr4_4:74058725-74058744 | None:intergenic | 15.0% |
| !!! | TTTACTGTTAATTTCATTTT+GGG | + | chr4_4:74058836-74058855 | None:intergenic | 15.0% |
| !!! | TTATATAAGTTGTTTTGTTT+TGG | - | chr4_4:74059146-74059165 | Msa0702410:intron | 15.0% |
| !!! | TAGCTTTATTTGTTTAATTT+TGG | - | chr4_4:74059296-74059315 | Msa0702410:exon | 15.0% |
| !!! | TTGATTTGATTTGATTTGAT+TGG | + | chr4_4:74052048-74052067 | None:intergenic | 20.0% |
| !! | AAAATCAAACATGATTTGAT+TGG | + | chr4_4:74052254-74052273 | None:intergenic | 20.0% |
| !! | ATGGATAGAAATGATTATTA+CGG | - | chr4_4:74052302-74052321 | Msa0702410:three_prime_UTR | 20.0% |
| !!! | TTTTACCTGAATAAGATTAA+GGG | + | chr4_4:74052342-74052361 | None:intergenic | 20.0% |
| !!! | TTTTTACCTGAATAAGATTA+AGG | + | chr4_4:74052343-74052362 | None:intergenic | 20.0% |
| !! | GAAAATAAATGAATAACCTT+AGG | + | chr4_4:74052532-74052551 | None:intergenic | 20.0% |
| !! | TTCAGTTTAAAAATCAAGTT+AGG | - | chr4_4:74052679-74052698 | Msa0702410:intron | 20.0% |
| !! | TTATGTTCAAGATTATAATG+AGG | - | chr4_4:74053183-74053202 | Msa0702410:CDS | 20.0% |
| !! | TATAAATGGAAATATAATGG+AGG | + | chr4_4:74053306-74053325 | None:intergenic | 20.0% |
| !! | CATTGAATTGAATCTATAAA+TGG | + | chr4_4:74053320-74053339 | None:intergenic | 20.0% |
| !! | TTAAAGAAGATACCATATTA+AGG | + | chr4_4:74053420-74053439 | None:intergenic | 20.0% |
| !! | ATATTACCATATGTATTTGT+AGG | - | chr4_4:74053625-74053644 | Msa0702410:intron | 20.0% |
| !! | TATTACCATATGTATTTGTA+GGG | - | chr4_4:74053626-74053645 | Msa0702410:intron | 20.0% |
| !!! | TTGTTATTCTTTCTGAATTA+TGG | - | chr4_4:74053889-74053908 | Msa0702410:intron | 20.0% |
| !! | TGTTATTCTTTCTGAATTAT+GGG | - | chr4_4:74053890-74053909 | Msa0702410:intron | 20.0% |
| !! | TAACTATAAGTAGGAAATAT+AGG | + | chr4_4:74053983-74054002 | None:intergenic | 20.0% |
| !!! | TATTTATCTTTTATTGGTAC+AGG | - | chr4_4:74054177-74054196 | Msa0702410:intron | 20.0% |
| !!! | ATTTTCTTCTAAATATGTTG+AGG | + | chr4_4:74054436-74054455 | None:intergenic | 20.0% |
| !! | TATGTAAAAAATTAGTCACT+CGG | - | chr4_4:74054563-74054582 | Msa0702410:intron | 20.0% |
| !! | TTCTTTCTTTAATCTATCTA+TGG | + | chr4_4:74054654-74054673 | None:intergenic | 20.0% |
| !! | TAGATAGATTAAAGAAAGAA+AGG | - | chr4_4:74054654-74054673 | Msa0702410:intron | 20.0% |
| !!! | TAATATAATCAAGGCTATTT+TGG | + | chr4_4:74054838-74054857 | None:intergenic | 20.0% |
| !! | ATGATGTGTATATTTGTAAA+AGG | + | chr4_4:74055085-74055104 | None:intergenic | 20.0% |
| !! | AATAACTATAAAGTAAGGAT+CGG | + | chr4_4:74055312-74055331 | None:intergenic | 20.0% |
| !!! | AATTATTTTGCTTTAATTCC+AGG | - | chr4_4:74055393-74055412 | Msa0702410:intron | 20.0% |
| !!! | ATTGATTTTTATTACCTTGT+TGG | + | chr4_4:74055512-74055531 | None:intergenic | 20.0% |
| !!! | TTTTTTCTAACTTCAAGTAA+GGG | + | chr4_4:74055651-74055670 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTAACTTCAAGTA+AGG | + | chr4_4:74055652-74055671 | None:intergenic | 20.0% |
| !!! | TTTTGATTAAAACAATGTTG+CGG | + | chr4_4:74055737-74055756 | None:intergenic | 20.0% |
| !! | AAACTGAATATTGAATTCTA+TGG | + | chr4_4:74056489-74056508 | None:intergenic | 20.0% |
| !! | AATATAACTTATTAACCTGA+AGG | + | chr4_4:74056736-74056755 | None:intergenic | 20.0% |
| !! | TTAAATTATTATACTGCTCT+TGG | - | chr4_4:74056767-74056786 | Msa0702410:intron | 20.0% |
| !!! | TGAATTATGGTTTCATATTT+TGG | - | chr4_4:74057457-74057476 | Msa0702410:intron | 20.0% |
| !!! | CTTTTATAGTATTGTTTACT+AGG | + | chr4_4:74057858-74057877 | None:intergenic | 20.0% |
| !! | CTAGTAAACAATACTATAAA+AGG | - | chr4_4:74057856-74057875 | Msa0702410:intron | 20.0% |
| !!! | ATTTTGGTATACATTGTATA+TGG | + | chr4_4:74057927-74057946 | None:intergenic | 20.0% |
| !! | TGCAAAGATAATTTATTGTT+TGG | - | chr4_4:74057946-74057965 | Msa0702410:intron | 20.0% |
| !!! | GTTTACTGTTAATTTCATTT+TGG | + | chr4_4:74058837-74058856 | None:intergenic | 20.0% |
| !!! | TTGTTTAATTTTGGTACAAA+TGG | - | chr4_4:74059305-74059324 | Msa0702410:exon | 20.0% |
| ! | TAATATTGATATGAACCCTA+AGG | - | chr4_4:74052513-74052532 | Msa0702410:intron | 25.0% |
| ! | TTTCAAATATTCCCATAAGT+GGG | + | chr4_4:74053138-74053157 | None:intergenic | 25.0% |
| !! | TTTTCAAATATTCCCATAAG+TGG | + | chr4_4:74053139-74053158 | None:intergenic | 25.0% |
| ! | AGTTCAAAACAAATTTCCAA+AGG | + | chr4_4:74053379-74053398 | None:intergenic | 25.0% |
| ! | TATACTTTCGTTCTTAGTAT+AGG | + | chr4_4:74053666-74053685 | None:intergenic | 25.0% |
| ! | AAAGTATAACTTTGTGTGAA+TGG | - | chr4_4:74053678-74053697 | Msa0702410:intron | 25.0% |
| ! | ATATATCCTTTGTATGGTTT+AGG | - | chr4_4:74054045-74054064 | Msa0702410:intron | 25.0% |
| ! | AATAACTTTAGTCCATACAT+TGG | + | chr4_4:74054390-74054409 | None:intergenic | 25.0% |
| !! | ATACAAAGACTTTTATTGAG+CGG | - | chr4_4:74054494-74054513 | Msa0702410:intron | 25.0% |
| ! | CAGTGCTAATAATATAATCA+AGG | + | chr4_4:74054847-74054866 | None:intergenic | 25.0% |
| !!! | CGTTTTAATGCCTTAAAAAA+TGG | + | chr4_4:74054872-74054891 | None:intergenic | 25.0% |
| ! | AAAAGAAAGTGAATAGAAAG+TGG | + | chr4_4:74055117-74055136 | None:intergenic | 25.0% |
| !!! | TTTGTTAACTAGCTTTCAAA+TGG | - | chr4_4:74055281-74055300 | Msa0702410:intron | 25.0% |
| ! | ACTGCAATATTTCTTTCTAA+AGG | - | chr4_4:74055618-74055637 | Msa0702410:CDS | 25.0% |
| !!! | TTTTTAATTTTCCTAACAGC+AGG | + | chr4_4:74055936-74055955 | None:intergenic | 25.0% |
| !!! | TTCTCTAAAATATGTCTCAT+GGG | + | chr4_4:74056244-74056263 | None:intergenic | 25.0% |
| !!! | ATTCTCTAAAATATGTCTCA+TGG | + | chr4_4:74056245-74056264 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATATGAGAC+AGG | - | chr4_4:74056350-74056369 | Msa0702410:intron | 25.0% |
| !! | TTTAAACTAGGTTGAATACT+AGG | + | chr4_4:74056690-74056709 | None:intergenic | 25.0% |
| ! | CCTATTTATGCTAATATACT+AGG | + | chr4_4:74057751-74057770 | None:intergenic | 25.0% |
| ! | CCTAGTATATTAGCATAAAT+AGG | - | chr4_4:74057748-74057767 | Msa0702410:intron | 25.0% |
| !!! | TAAAAGGTTCTTTTCTAGTT+AGG | - | chr4_4:74057872-74057891 | Msa0702410:intron | 25.0% |
| !!! | AAAAGGTTCTTTTCTAGTTA+GGG | - | chr4_4:74057873-74057892 | Msa0702410:intron | 25.0% |
| !! | ATGCAATAAATTTTCCCTTT+GGG | + | chr4_4:74058107-74058126 | None:intergenic | 25.0% |
| !! | AATGCAATAAATTTTCCCTT+TGG | + | chr4_4:74058108-74058127 | None:intergenic | 25.0% |
| ! | TCAAAAAATATCTCATCAAC+AGG | + | chr4_4:74058198-74058217 | None:intergenic | 25.0% |
| ! | CATAAAACTAAATTGTCACT+TGG | + | chr4_4:74058447-74058466 | None:intergenic | 25.0% |
| !! | TTTATGTGCTTGATTTTACT+TGG | - | chr4_4:74058461-74058480 | Msa0702410:CDS | 25.0% |
| !! | TCGAACATATCATTATCTTT+TGG | - | chr4_4:74058530-74058549 | Msa0702410:CDS | 25.0% |
| !!! | TTTCAAGTTGCATTGAATTT+TGG | - | chr4_4:74058571-74058590 | Msa0702410:intron | 25.0% |
| ! | CACATTAAGAATTCAAAATC+AGG | + | chr4_4:74058965-74058984 | None:intergenic | 25.0% |
| !! | CTGATTTTGAATTCTTAATG+TGG | - | chr4_4:74058963-74058982 | Msa0702410:intron | 25.0% |
| TTTGTAATAGACTGTTGTTG+AGG | - | chr4_4:74052015-74052034 | Msa0702410:three_prime_UTR | 30.0% | |
| GATAGAAATGATTATTACGG+AGG | - | chr4_4:74052305-74052324 | Msa0702410:three_prime_UTR | 30.0% | |
| TTATTTGTATGATTCAGCTC+TGG | - | chr4_4:74052434-74052453 | Msa0702410:intron | 30.0% | |
| !! | GATTCAGCTAGAATTGATTT+TGG | + | chr4_4:74052764-74052783 | None:intergenic | 30.0% |
| ! | TTTGGGTGTTTAGTTCATTA+TGG | - | chr4_4:74052858-74052877 | Msa0702410:intron | 30.0% |
| CTTTGTCTTTAACAAAGCAA+AGG | - | chr4_4:74052957-74052976 | Msa0702410:intron | 30.0% | |
| ! | CTCTACACATTGATTACATT+GGG | - | chr4_4:74053002-74053021 | Msa0702410:CDS | 30.0% |
| ! | TTACATTGGGAAATCTGTTT+TGG | - | chr4_4:74053015-74053034 | Msa0702410:CDS | 30.0% |
| !!! | TGATGTATTGATTGCGTTTT+TGG | - | chr4_4:74053050-74053069 | Msa0702410:CDS | 30.0% |
| TTCAAATATTCCCATAAGTG+GGG | + | chr4_4:74053137-74053156 | None:intergenic | 30.0% | |
| TGTGGTGATTTACGATAAAT+TGG | - | chr4_4:74053539-74053558 | Msa0702410:intron | 30.0% | |
| AAAGCTTCATCTATTCCATT+TGG | - | chr4_4:74053923-74053942 | Msa0702410:intron | 30.0% | |
| AATAAAGCTAAGGATCCAAA+TGG | + | chr4_4:74053941-74053960 | None:intergenic | 30.0% | |
| CTCTGCATATAACTATAAGT+AGG | + | chr4_4:74053992-74054011 | None:intergenic | 30.0% | |
| CCATACAAAGGATATATGTA+AGG | + | chr4_4:74054042-74054061 | None:intergenic | 30.0% | |
| CCTTACATATATCCTTTGTA+TGG | - | chr4_4:74054039-74054058 | Msa0702410:intron | 30.0% | |
| TGTGAATTAGAAGAGAACAA+GGG | + | chr4_4:74054304-74054323 | None:intergenic | 30.0% | |
| !!! | CAGTAGAAACATGTTTTGAT+TGG | - | chr4_4:74054363-74054382 | Msa0702410:intron | 30.0% |
| ! | TACAAAGACTTTTATTGAGC+GGG | - | chr4_4:74054495-74054514 | Msa0702410:intron | 30.0% |
| AAATTAGTCACTCGGTTATT+TGG | - | chr4_4:74054571-74054590 | Msa0702410:intron | 30.0% | |
| AGATTAAAGAAAGAAAGGCT+AGG | - | chr4_4:74054659-74054678 | Msa0702410:intron | 30.0% | |
| GATTAAAGAAAGAAAGGCTA+GGG | - | chr4_4:74054660-74054679 | Msa0702410:intron | 30.0% | |
| !!! | CTTTTTTATGTGTTGCCAAA+GGG | + | chr4_4:74054717-74054736 | None:intergenic | 30.0% |
| ! | TTGGACTTTTCTCATGAAAT+TGG | + | chr4_4:74054819-74054838 | None:intergenic | 30.0% |
| ! | CATGTAGCTAATACTTTTCA+AGG | - | chr4_4:74055049-74055068 | Msa0702410:intron | 30.0% |
| ! | AGAAGATTTTTGTGGTTGTT+TGG | + | chr4_4:74055143-74055162 | None:intergenic | 30.0% |
| ! | GGAAAGTAAGAAGATTTTTG+TGG | + | chr4_4:74055151-74055170 | None:intergenic | 30.0% |
| GTATAAGGAAAGAATGATAG+TGG | + | chr4_4:74055172-74055191 | None:intergenic | 30.0% | |
| ! | GTGAAAGGAATGAAAGTATA+AGG | + | chr4_4:74055187-74055206 | None:intergenic | 30.0% |
| GTTTAAGGAAAGAAAGTGAA+AGG | + | chr4_4:74055202-74055221 | None:intergenic | 30.0% | |
| GCTAGTTACATTCTTTCTTT+CGG | - | chr4_4:74055363-74055382 | Msa0702410:intron | 30.0% | |
| ! | TATTTTGCTTTAATTCCAGG+TGG | - | chr4_4:74055396-74055415 | Msa0702410:intron | 30.0% |
| !!! | ACAAACAAGTTTTTTGCACT+TGG | + | chr4_4:74055473-74055492 | None:intergenic | 30.0% |
| ! | ATATCTGAAATGACACTTGA+TGG | - | chr4_4:74055707-74055726 | Msa0702410:intron | 30.0% |
| AAAATTTCCACCATTTCAAC+AGG | - | chr4_4:74055753-74055772 | Msa0702410:intron | 30.0% | |
| GTAAAATATTTCCTGCTGTT+AGG | - | chr4_4:74055922-74055941 | Msa0702410:CDS | 30.0% | |
| CAATGACTTTGGATTTCTTA+GGG | - | chr4_4:74055987-74056006 | Msa0702410:CDS | 30.0% | |
| ACTCAAAGTTCTCACAAATA+TGG | + | chr4_4:74056023-74056042 | None:intergenic | 30.0% | |
| TGCTTATATTCAAGACTAGA+GGG | + | chr4_4:74056080-74056099 | None:intergenic | 30.0% | |
| TTGCTTATATTCAAGACTAG+AGG | + | chr4_4:74056081-74056100 | None:intergenic | 30.0% | |
| ! | AAACGATTTTCATGTATGAG+TGG | + | chr4_4:74056399-74056418 | None:intergenic | 30.0% |
| !! | TTCTATGGCTTTGTTGAATA+TGG | + | chr4_4:74056474-74056493 | None:intergenic | 30.0% |
| TTGAAAAGCTGATATGATTG+TGG | - | chr4_4:74056525-74056544 | Msa0702410:intron | 30.0% | |
| ! | CTTAATAGTTCTGCTTAACT+GGG | - | chr4_4:74056629-74056648 | Msa0702410:intron | 30.0% |
| TACTAGTTATACGCTTATAC+TGG | - | chr4_4:74056664-74056683 | Msa0702410:intron | 30.0% | |
| TTAGTATAAATAGGACCTTC+AGG | - | chr4_4:74056718-74056737 | Msa0702410:intron | 30.0% | |
| ! | AATTGCAATCACTAGGTTTT+GGG | - | chr4_4:74057017-74057036 | Msa0702410:intron | 30.0% |
| TAGTTGTAGAATTCTACAAC+AGG | - | chr4_4:74057341-74057360 | Msa0702410:intron | 30.0% | |
| TATGGAGAACATGTTATTGT+AGG | - | chr4_4:74057398-74057417 | Msa0702410:CDS | 30.0% | |
| ATGGAGAACATGTTATTGTA+GGG | - | chr4_4:74057399-74057418 | Msa0702410:CDS | 30.0% | |
| TCAGAAACATACAATGTTAG+TGG | - | chr4_4:74057694-74057713 | Msa0702410:intron | 30.0% | |
| !! | TACAATGTTAGTGGTCTTAT+TGG | - | chr4_4:74057703-74057722 | Msa0702410:intron | 30.0% |
| TTAGCATAAATAGGACCATT+AGG | - | chr4_4:74057757-74057776 | Msa0702410:intron | 30.0% | |
| ATATTGAAATGCTGACCTAA+TGG | + | chr4_4:74057775-74057794 | None:intergenic | 30.0% | |
| GAATGATTGCAAATATCCAT+AGG | + | chr4_4:74057903-74057922 | None:intergenic | 30.0% | |
| !!! | TTATTTTTTTTGTCATGGGC+AGG | - | chr4_4:74058046-74058065 | Msa0702410:intron | 30.0% |
| TATTGCATTTGTATCAACTG+AGG | - | chr4_4:74058119-74058138 | Msa0702410:intron | 30.0% | |
| TTATCAACGTATACATGTTG+AGG | + | chr4_4:74058403-74058422 | None:intergenic | 30.0% | |
| !! | AACATGTATACGTTGATAAC+TGG | - | chr4_4:74058404-74058423 | Msa0702410:intron | 30.0% |
| GATAATTTACTAGTGACTGT+CGG | - | chr4_4:74058762-74058781 | Msa0702410:intron | 30.0% | |
| TGAAATTAACAGTAAACCCA+TGG | - | chr4_4:74058840-74058859 | Msa0702410:intron | 30.0% | |
| TTAATGTGGTGAATTTGAAC+AGG | - | chr4_4:74058977-74058996 | Msa0702410:intron | 30.0% | |
| ACATTTAACAAACGAGCAAT+TGG | + | chr4_4:74059353-74059372 | None:intergenic | 30.0% | |
| AAGACACGACAACTATTTAT+GGG | - | chr4_4:74059394-74059413 | Msa0702410:five_prime_UTR | 30.0% | |
| ATTCTTCATCCATCTTCGAT+CGG | + | chr4_4:74052109-74052128 | None:intergenic | 35.0% | |
| AGAATACGATGTAATCGTTC+TGG | - | chr4_4:74052124-74052143 | Msa0702410:three_prime_UTR | 35.0% | |
| GAATACGATGTAATCGTTCT+GGG | - | chr4_4:74052125-74052144 | Msa0702410:three_prime_UTR | 35.0% | |
| !! | TTGAAGTGTTGGTTACTTTG+AGG | + | chr4_4:74052199-74052218 | None:intergenic | 35.0% |
| ! | TGAAATCAGTGTTGAAGTGT+TGG | + | chr4_4:74052210-74052229 | None:intergenic | 35.0% |
| ! | TTTTGCTTAGGTTCTTCACA+TGG | - | chr4_4:74052283-74052302 | Msa0702410:three_prime_UTR | 35.0% |
| CTGAATAAGATTAAGGGAAG+TGG | + | chr4_4:74052336-74052355 | None:intergenic | 35.0% | |
| CACTTCCCTTAATCTTATTC+AGG | - | chr4_4:74052334-74052353 | Msa0702410:three_prime_UTR | 35.0% | |
| AGTGAGAGTTGAATGTAAAG+TGG | - | chr4_4:74052623-74052642 | Msa0702410:intron | 35.0% | |
| !! | TCAGCTAGAATTGATTTTGG+AGG | + | chr4_4:74052761-74052780 | None:intergenic | 35.0% |
| ! | GTTTAGTTCATTATGGCCAA+TGG | - | chr4_4:74052865-74052884 | Msa0702410:intron | 35.0% |
| GTATCTCTATTTCAAAGCTG+TGG | - | chr4_4:74052927-74052946 | Msa0702410:intron | 35.0% | |
| ! | GCTCTACACATTGATTACAT+TGG | - | chr4_4:74053001-74053020 | Msa0702410:CDS | 35.0% |
| !!! | TGTATTGATTGCGTTTTTGG+TGG | - | chr4_4:74053053-74053072 | Msa0702410:intron | 35.0% |
| !!! | GTATTGATTGCGTTTTTGGT+GGG | - | chr4_4:74053054-74053073 | Msa0702410:intron | 35.0% |
| !! | GTGGGAAATTCCACTTTTAT+AGG | - | chr4_4:74053072-74053091 | Msa0702410:intron | 35.0% |
| !! | TCCACTTTTATAGGTTCACA+AGG | - | chr4_4:74053081-74053100 | Msa0702410:intron | 35.0% |
| ACCTTGTGAACCTATAAAAG+TGG | + | chr4_4:74053085-74053104 | None:intergenic | 35.0% | |
| AAATGAAAAACTTGCGTGCA+CGG | + | chr4_4:74053165-74053184 | None:intergenic | 35.0% | |
| CTGATCCTAAAACTCATGAT+GGG | - | chr4_4:74053206-74053225 | Msa0702410:CDS | 35.0% | |
| GAGTACTAAGGCAATACAAA+GGG | + | chr4_4:74053348-74053367 | None:intergenic | 35.0% | |
| ! | AGAGTACTAAGGCAATACAA+AGG | + | chr4_4:74053349-74053368 | None:intergenic | 35.0% |
| ! | AAGGACTATACAGAGTACTA+AGG | + | chr4_4:74053360-74053379 | None:intergenic | 35.0% |
| TAGTACTCTGTATAGTCCTT+TGG | - | chr4_4:74053360-74053379 | Msa0702410:intron | 35.0% | |
| CATATTAAGGTCGAAAGACA+TGG | + | chr4_4:74053407-74053426 | None:intergenic | 35.0% | |
| CATGTCTTTCGACCTTAATA+TGG | - | chr4_4:74053405-74053424 | Msa0702410:intron | 35.0% | |
| GAATTCAAATTCCAAGCTTG+TGG | - | chr4_4:74053521-74053540 | Msa0702410:intron | 35.0% | |
| ACCATATGTATTTGTAGGGT+AGG | - | chr4_4:74053630-74053649 | Msa0702410:intron | 35.0% | |
| ACCTACCCTACAAATACATA+TGG | + | chr4_4:74053634-74053653 | None:intergenic | 35.0% | |
| TTGACCCATGACAGAAAATT+TGG | - | chr4_4:74053738-74053757 | Msa0702410:intron | 35.0% | |
| ! | AAGGCCAAATTTTCTGTCAT+GGG | + | chr4_4:74053745-74053764 | None:intergenic | 35.0% |
| AAGTAGGAAATATAGGCCAA+TGG | + | chr4_4:74053976-74053995 | None:intergenic | 35.0% | |
| ! | TGTTAGATTTGTTCTGCTCA+TGG | - | chr4_4:74054145-74054164 | Msa0702410:intron | 35.0% |
| GTTGAATAAACCTGAATGCA+AGG | - | chr4_4:74054240-74054259 | Msa0702410:intron | 35.0% | |
| AGTATATCTACCTTGCATTC+AGG | + | chr4_4:74054253-74054272 | None:intergenic | 35.0% | |
| GTGTGAATTAGAAGAGAACA+AGG | + | chr4_4:74054305-74054324 | None:intergenic | 35.0% | |
| ATTCACACTAATGTGTGACT+TGG | - | chr4_4:74054317-74054336 | Msa0702410:intron | 35.0% | |
| !!! | GTTTTGATTGGTCCAATGTA+TGG | - | chr4_4:74054375-74054394 | Msa0702410:intron | 35.0% |
| TCCAAACACACCAATGTATT+GGG | + | chr4_4:74054630-74054649 | None:intergenic | 35.0% | |
| ATCCAAACACACCAATGTAT+TGG | + | chr4_4:74054631-74054650 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTATGTGTTGCCAA+AGG | + | chr4_4:74054718-74054737 | None:intergenic | 35.0% |
| CCTTTGGCAACACATAAAAA+AGG | - | chr4_4:74054715-74054734 | Msa0702410:intron | 35.0% | |
| !!! | TGGAAAGAAAGTTTTGAGGT+GGG | - | chr4_4:74054740-74054759 | Msa0702410:intron | 35.0% |
| !!! | TAGCACTGTGCCATTTTTTA+AGG | - | chr4_4:74054859-74054878 | Msa0702410:intron | 35.0% |
| GAAAGTGAATAGAAAGTGGA+AGG | + | chr4_4:74055113-74055132 | None:intergenic | 35.0% | |
| GGTTTGCAGAAGAATGTTTA+AGG | + | chr4_4:74055217-74055236 | None:intergenic | 35.0% | |
| TAAGAGACTATGGGTATGTT+TGG | + | chr4_4:74055238-74055257 | None:intergenic | 35.0% | |
| CAACGAGTTTAAGAGACTAT+GGG | + | chr4_4:74055247-74055266 | None:intergenic | 35.0% | |
| TCAACGAGTTTAAGAGACTA+TGG | + | chr4_4:74055248-74055267 | None:intergenic | 35.0% | |
| ! | GGAATTTGATGATCAAGGAA+AGG | - | chr4_4:74055417-74055436 | Msa0702410:intron | 35.0% |
| GATGATCAAGGAAAGGTTAT+TGG | - | chr4_4:74055424-74055443 | Msa0702410:intron | 35.0% | |
| AGTTTCACTATAACCTGAAC+TGG | + | chr4_4:74055557-74055576 | None:intergenic | 35.0% | |
| ACTATTAGCATAGCGACTTT+AGG | + | chr4_4:74055596-74055615 | None:intergenic | 35.0% | |
| TGACTTACATGTCTGACTTT+CGG | + | chr4_4:74055888-74055907 | None:intergenic | 35.0% | |
| CTAAGTTCTTCCAATGACTT+TGG | - | chr4_4:74055976-74055995 | Msa0702410:CDS | 35.0% | |
| CCTAAGAAATCCAAAGTCAT+TGG | + | chr4_4:74055989-74056008 | None:intergenic | 35.0% | |
| CCAATGACTTTGGATTTCTT+AGG | - | chr4_4:74055986-74056005 | Msa0702410:CDS | 35.0% | |
| ! | AACAAAATCGTCGTGTTTTG+TGG | - | chr4_4:74056099-74056118 | Msa0702410:intron | 35.0% |
| TTGCTTATATATGAGACAGG+AGG | - | chr4_4:74056353-74056372 | Msa0702410:intron | 35.0% | |
| TGCTTATATATGAGACAGGA+GGG | - | chr4_4:74056354-74056373 | Msa0702410:intron | 35.0% | |
| !! | GCAATGTTTTGGATATCAGT+TGG | + | chr4_4:74056434-74056453 | None:intergenic | 35.0% |
| ! | ATCTAGTCATCGCAATGTTT+TGG | + | chr4_4:74056445-74056464 | None:intergenic | 35.0% |
| AAAAGCTGATATGATTGTGG+TGG | - | chr4_4:74056528-74056547 | Msa0702410:intron | 35.0% | |
| AAAGCTGATATGATTGTGGT+GGG | - | chr4_4:74056529-74056548 | Msa0702410:intron | 35.0% | |
| ! | GCTTAATAGTTCTGCTTAAC+TGG | - | chr4_4:74056628-74056647 | Msa0702410:intron | 35.0% |
| GGGAAGAAAAGAACAAAAGA+GGG | + | chr4_4:74056800-74056819 | None:intergenic | 35.0% | |
| TTATATTCTTGTCCAACCGA+TGG | - | chr4_4:74056845-74056864 | Msa0702410:intron | 35.0% | |
| AACAGCTTAAGTAGAGAAAG+AGG | + | chr4_4:74056881-74056900 | None:intergenic | 35.0% | |
| ! | GATGCTTTCATTGAGTGTTT+TGG | - | chr4_4:74056930-74056949 | Msa0702410:intron | 35.0% |
| TTCCCCAAATTGATCTACTT+GGG | - | chr4_4:74056981-74057000 | Msa0702410:intron | 35.0% | |
| TACCCAAGTAGATCAATTTG+GGG | + | chr4_4:74056986-74057005 | None:intergenic | 35.0% | |
| GTACCCAAGTAGATCAATTT+GGG | + | chr4_4:74056987-74057006 | None:intergenic | 35.0% | |
| AGTACCCAAGTAGATCAATT+TGG | + | chr4_4:74056988-74057007 | None:intergenic | 35.0% | |
| ! | CAATTGCAATCACTAGGTTT+TGG | - | chr4_4:74057016-74057035 | Msa0702410:intron | 35.0% |
| GAGCTGCTCAACTATTTATA+TGG | - | chr4_4:74057138-74057157 | Msa0702410:intron | 35.0% | |
| TTATTAAGGCCGAGTAGATT+TGG | + | chr4_4:74057301-74057320 | None:intergenic | 35.0% | |
| AGACAGGAGAAGGATTATTA+AGG | + | chr4_4:74057315-74057334 | None:intergenic | 35.0% | |
| TCAAAAAGTCCCATGCTTAT+TGG | + | chr4_4:74057440-74057459 | None:intergenic | 35.0% | |
| ! | GCATGGGACTTTTTGAATTA+TGG | - | chr4_4:74057444-74057463 | Msa0702410:intron | 35.0% |
| CAACTAAGAGAGGATTCTAA+TGG | - | chr4_4:74057670-74057689 | Msa0702410:intron | 35.0% | |
| TGCTAATATACTAGGTCAAC+AGG | + | chr4_4:74057743-74057762 | None:intergenic | 35.0% | |
| CGAAATAAAGCAGTTGTCTA+GGG | + | chr4_4:74058256-74058275 | None:intergenic | 35.0% | |
| TCGAAATAAAGCAGTTGTCT+AGG | + | chr4_4:74058257-74058276 | None:intergenic | 35.0% | |
| !! | TACTGTTGATTCAAAGTGAG+TGG | + | chr4_4:74058372-74058391 | None:intergenic | 35.0% |
| TCACTTTGAATCAACAGTAC+TGG | - | chr4_4:74058373-74058392 | Msa0702410:intron | 35.0% | |
| !! | GTATACGTTGATAACTGGAA+AGG | - | chr4_4:74058409-74058428 | Msa0702410:intron | 35.0% |
| CTGCTATTGTTACGCTATAA+CGG | - | chr4_4:74058501-74058520 | Msa0702410:CDS | 35.0% | |
| TGTCAGGAATAAGAAAGATG+AGG | + | chr4_4:74058604-74058623 | None:intergenic | 35.0% | |
| TCGTTGTAAAGTGCAAAGTA+TGG | + | chr4_4:74059102-74059121 | None:intergenic | 35.0% | |
| ! | TGTAGAACAGATTTGTTTGC+AGG | - | chr4_4:74059189-74059208 | Msa0702410:intron | 35.0% |
| ! | GTAGAACAGATTTGTTTGCA+GGG | - | chr4_4:74059190-74059209 | Msa0702410:intron | 35.0% |
| CAAGACACGACAACTATTTA+TGG | - | chr4_4:74059393-74059412 | Msa0702410:five_prime_UTR | 35.0% | |
| TTCAGACTGCTTCTTCTACT+CGG | + | chr4_4:74051984-74052003 | None:intergenic | 40.0% | |
| CTCAAAGAATGCATTCTCAG+TGG | - | chr4_4:74052155-74052174 | Msa0702410:three_prime_UTR | 40.0% | |
| !! | TTCAGCTCTGGAAGAAATTC+AGG | - | chr4_4:74052446-74052465 | Msa0702410:intron | 40.0% |
| !! | TCAGCTCTGGAAGAAATTCA+GGG | - | chr4_4:74052447-74052466 | Msa0702410:intron | 40.0% |
| TCTTTGCTAGAACCCAAATG+AGG | + | chr4_4:74052490-74052509 | None:intergenic | 40.0% | |
| TACAATTCCTAGCTTCACGT+CGG | - | chr4_4:74052710-74052729 | Msa0702410:intron | 40.0% | |
| CTCTATTTCAAAGCTGTGGA+TGG | - | chr4_4:74052931-74052950 | Msa0702410:intron | 40.0% | |
| ! | CAAGGTACCTTCAAATGACA+TGG | - | chr4_4:74053099-74053118 | Msa0702410:intron | 40.0% |
| ! | AAAGCCTCCATGTCATTTGA+AGG | + | chr4_4:74053109-74053128 | None:intergenic | 40.0% |
| GCTGATCCTAAAACTCATGA+TGG | - | chr4_4:74053205-74053224 | Msa0702410:CDS | 40.0% | |
| ! | TCCTAAAACTCATGATGGGA+TGG | - | chr4_4:74053210-74053229 | Msa0702410:CDS | 40.0% |
| ! | TCCATCCCATCATGAGTTTT+AGG | + | chr4_4:74053214-74053233 | None:intergenic | 40.0% |
| CTTGACAAGAGTCACTACTA+AGG | - | chr4_4:74053234-74053253 | Msa0702410:CDS | 40.0% | |
| TACTAAGGCAATACAAAGGG+TGG | + | chr4_4:74053345-74053364 | None:intergenic | 40.0% | |
| ATCGTAAATCACCACAAGCT+TGG | + | chr4_4:74053535-74053554 | None:intergenic | 40.0% | |
| ! | CAAGGCCAAATTTTCTGTCA+TGG | + | chr4_4:74053746-74053765 | None:intergenic | 40.0% |
| AGTCCACAGTGTTATCATCA+AGG | + | chr4_4:74053764-74053783 | None:intergenic | 40.0% | |
| GATAACACTGTGGACTTCAT+TGG | - | chr4_4:74053768-74053787 | Msa0702410:intron | 40.0% | |
| AGACACTGTGAAGAGAATGA+AGG | - | chr4_4:74053842-74053861 | Msa0702410:intron | 40.0% | |
| AAGCGCACACAATAAAGCTA+AGG | + | chr4_4:74053951-74053970 | None:intergenic | 40.0% | |
| TATTGTGTGCGCTTATCCAT+TGG | - | chr4_4:74053957-74053976 | Msa0702410:intron | 40.0% | |
| AGTCTCTTGCACGATTTCAA+GGG | - | chr4_4:74054010-74054029 | Msa0702410:intron | 40.0% | |
| AGCTCTCCTAAACCATACAA+AGG | + | chr4_4:74054054-74054073 | None:intergenic | 40.0% | |
| CGGATAAACAGATGTAGACA+GGG | + | chr4_4:74054088-74054107 | None:intergenic | 40.0% | |
| ACGGATAAACAGATGTAGAC+AGG | + | chr4_4:74054089-74054108 | None:intergenic | 40.0% | |
| ATTCTCAACAGGAGATAGAG+CGG | + | chr4_4:74054119-74054138 | None:intergenic | 40.0% | |
| TCTATCTCCTGTTGAGAATG+TGG | - | chr4_4:74054120-74054139 | Msa0702410:intron | 40.0% | |
| TAACACACCACATTCTCAAC+AGG | + | chr4_4:74054130-74054149 | None:intergenic | 40.0% | |
| TATTGGTACAGGCATTTGCA+CGG | - | chr4_4:74054188-74054207 | Msa0702410:intron | 40.0% | |
| TGAATCCAACCCCAATACAT+TGG | - | chr4_4:74054617-74054636 | Msa0702410:intron | 40.0% | |
| CCAAACACACCAATGTATTG+GGG | + | chr4_4:74054629-74054648 | None:intergenic | 40.0% | |
| AAGAAAGGCTAGGGAAAGAA+AGG | - | chr4_4:74054669-74054688 | Msa0702410:intron | 40.0% | |
| ! | TTTTATGTGTTGCCAAAGGG+TGG | + | chr4_4:74054714-74054733 | None:intergenic | 40.0% |
| GGCAACACATAAAAAAGGTG+TGG | - | chr4_4:74054720-74054739 | Msa0702410:intron | 40.0% | |
| ! | GGTGTGGAAAGAAAGTTTTG+AGG | - | chr4_4:74054736-74054755 | Msa0702410:intron | 40.0% |
| !!! | GTGGAAAGAAAGTTTTGAGG+TGG | - | chr4_4:74054739-74054758 | Msa0702410:intron | 40.0% |
| !!! | TGTGGAAAGGTTTTGAGTGT+GGG | + | chr4_4:74054767-74054786 | None:intergenic | 40.0% |
| ! | TCTCATGAAATTGGTGCCTT+TGG | + | chr4_4:74054810-74054829 | None:intergenic | 40.0% |
| GCATCATGTACAAGCATACT+AGG | - | chr4_4:74054902-74054921 | Msa0702410:intron | 40.0% | |
| CTTGATCATCAAATTCCACC+TGG | + | chr4_4:74055414-74055433 | None:intergenic | 40.0% | |
| ! | CAGGTGGAATTTGATGATCA+AGG | - | chr4_4:74055412-74055431 | Msa0702410:intron | 40.0% |
| TCCATCATACTTGACCAACA+AGG | - | chr4_4:74055495-74055514 | Msa0702410:intron | 40.0% | |
| ACCTTGTTGGTCAAGTATGA+TGG | + | chr4_4:74055499-74055518 | None:intergenic | 40.0% | |
| !! | GAGAATAACTTGCACCGATT+GGG | + | chr4_4:74055848-74055867 | None:intergenic | 40.0% |
| TATTCTCCCACAAAAGCAAC+TGG | - | chr4_4:74055861-74055880 | Msa0702410:intron | 40.0% | |
| ATTCTCCCACAAAAGCAACT+GGG | - | chr4_4:74055862-74055881 | Msa0702410:intron | 40.0% | |
| GACTTTGGATTTCTTAGGGA+TGG | - | chr4_4:74055991-74056010 | Msa0702410:CDS | 40.0% | |
| GGATTTCTTAGGGATGGTAA+TGG | - | chr4_4:74055997-74056016 | Msa0702410:intron | 40.0% | |
| ! | TCTCATGGGAACTTGTTTCA+TGG | + | chr4_4:74056230-74056249 | None:intergenic | 40.0% |
| CGGGAAGAAAAGAACAAAAG+AGG | + | chr4_4:74056801-74056820 | None:intergenic | 40.0% | |
| GGGAACATATCTCAATGTGT+TGG | + | chr4_4:74056966-74056985 | None:intergenic | 40.0% | |
| GTTCCCCAAATTGATCTACT+TGG | - | chr4_4:74056980-74056999 | Msa0702410:intron | 40.0% | |
| CACTGTCAATTGCAATCACT+AGG | - | chr4_4:74057010-74057029 | Msa0702410:intron | 40.0% | |
| TTTGCAAATGAACAGCACCA+GGG | + | chr4_4:74057091-74057110 | None:intergenic | 40.0% | |
| ATTTGCAAATGAACAGCACC+AGG | + | chr4_4:74057092-74057111 | None:intergenic | 40.0% | |
| GTTGAGCAGCTCTACAATTA+GGG | + | chr4_4:74057130-74057149 | None:intergenic | 40.0% | |
| AGTTGAGCAGCTCTACAATT+AGG | + | chr4_4:74057131-74057150 | None:intergenic | 40.0% | |
| CTCACTCTCAGATAATCCAT+CGG | - | chr4_4:74057183-74057202 | Msa0702410:CDS | 40.0% | |
| ATCCTTTCTCGAAGGATGTA+AGG | - | chr4_4:74057275-74057294 | Msa0702410:intron | 40.0% | |
| GATGTAAGGCCAAATCTACT+CGG | - | chr4_4:74057289-74057308 | Msa0702410:intron | 40.0% | |
| TCTACAACTAGAACAGAGAC+AGG | + | chr4_4:74057331-74057350 | None:intergenic | 40.0% | |
| AAACTCCATACTGGGAAACA+TGG | + | chr4_4:74057367-74057386 | None:intergenic | 40.0% | |
| TGTTTCCCAGTATGGAGTTT+CGG | - | chr4_4:74057367-74057386 | Msa0702410:CDS | 40.0% | |
| TAAACCCGAAACTCCATACT+GGG | + | chr4_4:74057375-74057394 | None:intergenic | 40.0% | |
| ATAAACCCGAAACTCCATAC+TGG | + | chr4_4:74057376-74057395 | None:intergenic | 40.0% | |
| !! | GGAGTTTCGGGTTTATTGTA+TGG | - | chr4_4:74057380-74057399 | Msa0702410:CDS | 40.0% |
| ATGCTTATTGGACATCAGGA+TGG | + | chr4_4:74057428-74057447 | None:intergenic | 40.0% | |
| ATCCTGATGTCCAATAAGCA+TGG | - | chr4_4:74057427-74057446 | Msa0702410:intron | 40.0% | |
| TCCTGATGTCCAATAAGCAT+GGG | - | chr4_4:74057428-74057447 | Msa0702410:intron | 40.0% | |
| !! | GTCTGGGATAGCATTGTTTT+CGG | + | chr4_4:74057610-74057629 | None:intergenic | 40.0% |
| TGCTTCTACTCAACTAAGAG+AGG | - | chr4_4:74057660-74057679 | Msa0702410:intron | 40.0% | |
| !!! | GGTTCTTTTCTAGTTAGGGT+AGG | - | chr4_4:74057877-74057896 | Msa0702410:intron | 40.0% |
| GAGAATACGAGCAACAGAAT+AGG | + | chr4_4:74058074-74058093 | None:intergenic | 40.0% | |
| TTCTCACAATGTTTGCCCAA+AGG | - | chr4_4:74058089-74058108 | Msa0702410:intron | 40.0% | |
| TCTCACAATGTTTGCCCAAA+GGG | - | chr4_4:74058090-74058109 | Msa0702410:intron | 40.0% | |
| AAACCTGGAATTGACCTTCT+AGG | - | chr4_4:74058171-74058190 | Msa0702410:CDS | 40.0% | |
| ! | ATAAAGCAGTTGTCTAGGGT+GGG | + | chr4_4:74058252-74058271 | None:intergenic | 40.0% |
| AATAAAGCAGTTGTCTAGGG+TGG | + | chr4_4:74058253-74058272 | None:intergenic | 40.0% | |
| ! | CAAATTTTCAGCCATACAGC+TGG | + | chr4_4:74058629-74058648 | None:intergenic | 40.0% |
| AATTTACTAGTGACTGTCGG+TGG | - | chr4_4:74058765-74058784 | Msa0702410:intron | 40.0% | |
| ATTTACTAGTGACTGTCGGT+GGG | - | chr4_4:74058766-74058785 | Msa0702410:intron | 40.0% | |
| GATTTCCATGCTTAGCCAAA+GGG | + | chr4_4:74058888-74058907 | None:intergenic | 40.0% | |
| AGATTTCCATGCTTAGCCAA+AGG | + | chr4_4:74058889-74058908 | None:intergenic | 40.0% | |
| !! | CTCGAATCTCGATTGTTTTG+TGG | - | chr4_4:74058931-74058950 | Msa0702410:intron | 40.0% |
| GCAACACATAACAGACACAA+AGG | + | chr4_4:74059070-74059089 | None:intergenic | 40.0% | |
| GTGCAAAGTATGGATTCCAT+CGG | + | chr4_4:74059092-74059111 | None:intergenic | 40.0% | |
| ! | AATTGCTTAAAGAGTGCACC+AGG | + | chr4_4:74059464-74059483 | None:intergenic | 40.0% |
| GAGTAGAAGAAGCAGTCTGA+AGG | - | chr4_4:74051983-74052002 | Msa0702410:three_prime_UTR | 45.0% | |
| !! | GATGTAATCGTTCTGGGAAC+TGG | - | chr4_4:74052131-74052150 | Msa0702410:three_prime_UTR | 45.0% |
| !! | CAGCTCTGGAAGAAATTCAG+GGG | - | chr4_4:74052448-74052467 | Msa0702410:intron | 45.0% |
| TTGCTAGAACCCAAATGAGG+AGG | + | chr4_4:74052487-74052506 | None:intergenic | 45.0% | |
| AACCCTCACTAATGTGCCAT+TGG | + | chr4_4:74052884-74052903 | None:intergenic | 45.0% | |
| GGTACCTTCAAATGACATGG+AGG | - | chr4_4:74053102-74053121 | Msa0702410:intron | 45.0% | |
| !! | GCTTTGAAGTCCCCACTTAT+GGG | - | chr4_4:74053124-74053143 | Msa0702410:intron | 45.0% |
| CTGTCATGGGTCAACAAGAA+AGG | + | chr4_4:74053732-74053751 | None:intergenic | 45.0% | |
| ! | TGGCCTTGATGATAACACTG+TGG | - | chr4_4:74053758-74053777 | Msa0702410:intron | 45.0% |
| GGACTTCATTGGTCATGCTT+TGG | - | chr4_4:74053779-74053798 | Msa0702410:intron | 45.0% | |
| GAGAATGAAGGTAAGTGTGC+TGG | - | chr4_4:74053854-74053873 | Msa0702410:intron | 45.0% | |
| GAGTCTCTTGCACGATTTCA+AGG | - | chr4_4:74054009-74054028 | Msa0702410:intron | 45.0% | |
| GTCTCTTGCACGATTTCAAG+GGG | - | chr4_4:74054011-74054030 | Msa0702410:intron | 45.0% | |
| TCTCTTGCACGATTTCAAGG+GGG | - | chr4_4:74054012-74054031 | Msa0702410:intron | 45.0% | |
| ACACACCAATGTATTGGGGT+TGG | + | chr4_4:74054625-74054644 | None:intergenic | 45.0% | |
| CCCCAATACATTGGTGTGTT+TGG | - | chr4_4:74054626-74054645 | Msa0702410:intron | 45.0% | |
| TACAGTACCTTTCCACCCTT+TGG | - | chr4_4:74054699-74054718 | Msa0702410:intron | 45.0% | |
| !!! | GTGTGGAAAGGTTTTGAGTG+TGG | + | chr4_4:74054768-74054787 | None:intergenic | 45.0% |
| CCTTTCCACACATCCATGAA+CGG | - | chr4_4:74054777-74054796 | Msa0702410:intron | 45.0% | |
| TGTTTCCGTTCATGGATGTG+TGG | + | chr4_4:74054785-74054804 | None:intergenic | 45.0% | |
| CTTTGGCATGTTTCCGTTCA+TGG | + | chr4_4:74054793-74054812 | None:intergenic | 45.0% | |
| CATGAACGGAAACATGCCAA+AGG | - | chr4_4:74054791-74054810 | Msa0702410:intron | 45.0% | |
| TTATTGGCGTCACGTCTGAA+GGG | - | chr4_4:74055440-74055459 | Msa0702410:intron | 45.0% | |
| TGACTACTTGCAACCAGTTC+AGG | - | chr4_4:74055541-74055560 | Msa0702410:CDS | 45.0% | |
| TTCCACCATTTCAACAGGTG+AGG | - | chr4_4:74055758-74055777 | Msa0702410:intron | 45.0% | |
| TTCCTCACCTGTTGAAATGG+TGG | + | chr4_4:74055763-74055782 | None:intergenic | 45.0% | |
| ACCATTTCAACAGGTGAGGA+AGG | - | chr4_4:74055762-74055781 | Msa0702410:intron | 45.0% | |
| ACCTTCCTCACCTGTTGAAA+TGG | + | chr4_4:74055766-74055785 | None:intergenic | 45.0% | |
| TTTCAACAGGTGAGGAAGGT+TGG | - | chr4_4:74055766-74055785 | Msa0702410:intron | 45.0% | |
| !! | GAAGGTTGGTAAGGTTGCAA+GGG | - | chr4_4:74055780-74055799 | Msa0702410:intron | 45.0% |
| !! | ATTGGGAGTCATTGGTGTTG+GGG | + | chr4_4:74055831-74055850 | None:intergenic | 45.0% |
| ! | GATTGGGAGTCATTGGTGTT+GGG | + | chr4_4:74055832-74055851 | None:intergenic | 45.0% |
| CAACACCAATGACTCCCAAT+CGG | - | chr4_4:74055831-74055850 | Msa0702410:intron | 45.0% | |
| ! | GGAGAATAACTTGCACCGAT+TGG | + | chr4_4:74055849-74055868 | None:intergenic | 45.0% |
| TTGTCCAACCGATGGCTATT+TGG | - | chr4_4:74056853-74056872 | Msa0702410:intron | 45.0% | |
| AAGAGGCTCCAAATAGCCAT+CGG | + | chr4_4:74056864-74056883 | None:intergenic | 45.0% | |
| GGGAGAGGTAATGAAGTTTG+TGG | + | chr4_4:74057055-74057074 | None:intergenic | 45.0% | |
| TTGCAAATGAACAGCACCAG+GGG | + | chr4_4:74057090-74057109 | None:intergenic | 45.0% | |
| CAAGATCATTGACACTCCGA+TGG | + | chr4_4:74057202-74057221 | None:intergenic | 45.0% | |
| TCCTTCGAGAAAGGATAGTG+CGG | + | chr4_4:74057271-74057290 | None:intergenic | 45.0% | |
| ACTAGAACAGAGACAGGAGA+AGG | + | chr4_4:74057325-74057344 | None:intergenic | 45.0% | |
| GTTTCCCAGTATGGAGTTTC+GGG | - | chr4_4:74057368-74057387 | Msa0702410:CDS | 45.0% | |
| TCCCATGCTTATTGGACATC+AGG | + | chr4_4:74057432-74057451 | None:intergenic | 45.0% | |
| !!! | GCTTGCCTGTTTTTGAGAAC+CGG | - | chr4_4:74057540-74057559 | Msa0702410:intron | 45.0% |
| !!! | CTTGCCTGTTTTTGAGAACC+GGG | - | chr4_4:74057541-74057560 | Msa0702410:intron | 45.0% |
| !!! | TTGCCTGTTTTTGAGAACCG+GGG | - | chr4_4:74057542-74057561 | Msa0702410:intron | 45.0% |
| AGTAACCACTATAACAGCCC+CGG | + | chr4_4:74057562-74057581 | None:intergenic | 45.0% | |
| GCTGTAGAGATACTCAGTCT+GGG | + | chr4_4:74057626-74057645 | None:intergenic | 45.0% | |
| AGCTGTAGAGATACTCAGTC+TGG | + | chr4_4:74057627-74057646 | None:intergenic | 45.0% | |
| ! | TTCTAGTTAGGGTAGGCCTA+TGG | - | chr4_4:74057884-74057903 | Msa0702410:intron | 45.0% |
| CCAGGTTTCAGTTCAATTGC+AGG | + | chr4_4:74058159-74058178 | None:intergenic | 45.0% | |
| CCTGCAATTGAACTGAAACC+TGG | - | chr4_4:74058156-74058175 | Msa0702410:intron | 45.0% | |
| TCTCATCAACAGGTCCTAGA+AGG | + | chr4_4:74058188-74058207 | None:intergenic | 45.0% | |
| CAGGTTTCTCGTACATCCAT+GGG | + | chr4_4:74058859-74058878 | None:intergenic | 45.0% | |
| TCTTTACTCTTCTGCAGCAC+TGG | + | chr4_4:74059033-74059052 | None:intergenic | 45.0% | |
| TGTCTGTTATGTGTTGCCGA+TGG | - | chr4_4:74059073-74059092 | Msa0702410:CDS | 45.0% | |
| !!! | TTTAATTATTTATCTTTTAT+TGG | - | chr4_4:74054171-74054190 | Msa0702410:intron | 5.0% |
| !! | AAATATTATTTAGTATAAAT+AGG | - | chr4_4:74056709-74056728 | Msa0702410:intron | 5.0% |
| !! | AAAAAAATAATAATAATTTG+AGG | - | chr4_4:74057975-74057994 | Msa0702410:intron | 5.0% |
| ATCGGAGATCGCAGTCGAAA+GGG | + | chr4_4:74052091-74052110 | None:intergenic | 50.0% | |
| !! | GGTTACTTTGAGGCCATCGA+CGG | + | chr4_4:74052189-74052208 | None:intergenic | 50.0% |
| TGACAAGCCTCCTCCTCATT+TGG | - | chr4_4:74052474-74052493 | Msa0702410:intron | 50.0% | |
| GACAAGCCTCCTCCTCATTT+GGG | - | chr4_4:74052475-74052494 | Msa0702410:intron | 50.0% | |
| CTAGAACCCAAATGAGGAGG+AGG | + | chr4_4:74052484-74052503 | None:intergenic | 50.0% | |
| !! | TCCTAGCTTCACGTCGGTTT+CGG | - | chr4_4:74052716-74052735 | Msa0702410:intron | 50.0% |
| TGGCCAATGGCACATTAGTG+AGG | - | chr4_4:74052878-74052897 | Msa0702410:intron | 50.0% | |
| GGCCAATGGCACATTAGTGA+GGG | - | chr4_4:74052879-74052898 | Msa0702410:intron | 50.0% | |
| !! | GGCTTTGAAGTCCCCACTTA+TGG | - | chr4_4:74053123-74053142 | Msa0702410:intron | 50.0% |
| CTCTTCACAGTGTCTAGTGC+TGG | + | chr4_4:74053837-74053856 | None:intergenic | 50.0% | |
| TGGTTTAGGAGAGCTTCCTC+AGG | - | chr4_4:74054059-74054078 | Msa0702410:intron | 50.0% | |
| GATGTAGACAGGGATACCTG+AGG | + | chr4_4:74054078-74054097 | None:intergenic | 50.0% | |
| !! | GAGATAGAGCGGACGGATTA+CGG | + | chr4_4:74054108-74054127 | None:intergenic | 50.0% |
| TCAACAGGAGATAGAGCGGA+CGG | + | chr4_4:74054115-74054134 | None:intergenic | 50.0% | |
| TGTGTTGCCAAAGGGTGGAA+AGG | + | chr4_4:74054709-74054728 | None:intergenic | 50.0% | |
| CCGTTCATGGATGTGTGGAA+AGG | + | chr4_4:74054780-74054799 | None:intergenic | 50.0% | |
| GTTATTGGCGTCACGTCTGA+AGG | - | chr4_4:74055439-74055458 | Msa0702410:intron | 50.0% | |
| TATTGGCGTCACGTCTGAAG+GGG | - | chr4_4:74055441-74055460 | Msa0702410:intron | 50.0% | |
| !! | ACAGGTGAGGAAGGTTGGTA+AGG | - | chr4_4:74055771-74055790 | Msa0702410:intron | 50.0% |
| !! | GGAAGGTTGGTAAGGTTGCA+AGG | - | chr4_4:74055779-74055798 | Msa0702410:intron | 50.0% |
| !! | GAGTCATTGGTGTTGGGGAT+CGG | + | chr4_4:74055826-74055845 | None:intergenic | 50.0% |
| CGATTGGGAGTCATTGGTGT+TGG | + | chr4_4:74055833-74055852 | None:intergenic | 50.0% | |
| !! | TTGCACCGATTGGGAGTCAT+TGG | + | chr4_4:74055839-74055858 | None:intergenic | 50.0% |
| !!! | TTCGGCCCAGTTGCTTTTGT+GGG | + | chr4_4:74055870-74055889 | None:intergenic | 50.0% |
| !!! | TTTCGGCCCAGTTGCTTTTG+TGG | + | chr4_4:74055871-74055890 | None:intergenic | 50.0% |
| TCGATCCATAACAGCCGACA+AGG | - | chr4_4:74056043-74056062 | Msa0702410:intron | 50.0% | |
| ! | TCACTCCTTGTCGGCTGTTA+TGG | + | chr4_4:74056051-74056070 | None:intergenic | 50.0% |
| !! | GGGAGTATCTCACTCCTTGT+CGG | + | chr4_4:74056060-74056079 | None:intergenic | 50.0% |
| AGCACTGTCGCAATGCAAAC+GGG | + | chr4_4:74056820-74056839 | None:intergenic | 50.0% | |
| CAGCACTGTCGCAATGCAAA+CGG | + | chr4_4:74056821-74056840 | None:intergenic | 50.0% | |
| TTCGAGAAAGGATAGTGCGG+GGG | + | chr4_4:74057268-74057287 | None:intergenic | 50.0% | |
| CTTCGAGAAAGGATAGTGCG+GGG | + | chr4_4:74057269-74057288 | None:intergenic | 50.0% | |
| CCTTCGAGAAAGGATAGTGC+GGG | + | chr4_4:74057270-74057289 | None:intergenic | 50.0% | |
| GGCCTTACATCCTTCGAGAA+AGG | + | chr4_4:74057280-74057299 | None:intergenic | 50.0% | |
| ACAGGCCATGTTTCCCAGTA+TGG | - | chr4_4:74057359-74057378 | Msa0702410:CDS | 50.0% | |
| GGGGCTGTTATAGTGGTTAC+TGG | - | chr4_4:74057561-74057580 | Msa0702410:intron | 50.0% | |
| GGTCCTAGAAGGTCAATTCC+AGG | + | chr4_4:74058177-74058196 | None:intergenic | 50.0% | |
| ! | TCTAGGGTGGGTTCATTGAC+TGG | + | chr4_4:74058240-74058259 | None:intergenic | 50.0% |
| TTCCTGACACACCAGCTGTA+TGG | - | chr4_4:74058615-74058634 | Msa0702410:intron | 50.0% | |
| CCAGGTTTCTCGTACATCCA+TGG | + | chr4_4:74058860-74058879 | None:intergenic | 50.0% | |
| CCATGGATGTACGAGAAACC+TGG | - | chr4_4:74058857-74058876 | Msa0702410:intron | 50.0% | |
| GATGTACGAGAAACCTGGTC+TGG | - | chr4_4:74058862-74058881 | Msa0702410:intron | 50.0% | |
| !! | ACAGGTTCTAGACCTCACTG+TGG | - | chr4_4:74058995-74059014 | Msa0702410:intron | 50.0% |
| ! | TTACTCTTCTGCAGCACTGG+CGG | + | chr4_4:74059030-74059049 | None:intergenic | 50.0% |
| ATTACGCACAAGCGAGCATC+TGG | + | chr4_4:74059230-74059249 | None:intergenic | 50.0% | |
| ! | GTGTTGCTAACTTGTGCTCC+TGG | - | chr4_4:74059443-74059462 | Msa0702410:five_prime_UTR | 50.0% |
| CGCAGTCGAAAGGGGGTTTA+GGG | + | chr4_4:74052082-74052101 | None:intergenic | 55.0% | |
| TCGCAGTCGAAAGGGGGTTT+AGG | + | chr4_4:74052083-74052102 | None:intergenic | 55.0% | |
| TCGGAGATCGCAGTCGAAAG+GGG | + | chr4_4:74052090-74052109 | None:intergenic | 55.0% | |
| GATCGGAGATCGCAGTCGAA+AGG | + | chr4_4:74052092-74052111 | None:intergenic | 55.0% | |
| CTGCGATCTCCGATCGAAGA+TGG | - | chr4_4:74052097-74052116 | Msa0702410:three_prime_UTR | 55.0% | |
| AGTGGTCTTCTCTCCGTCGA+TGG | - | chr4_4:74052173-74052192 | Msa0702410:three_prime_UTR | 55.0% | |
| TCCGAAACCGACGTGAAGCT+AGG | + | chr4_4:74052720-74052739 | None:intergenic | 55.0% | |
| !! | TAGCTTCACGTCGGTTTCGG+AGG | - | chr4_4:74052719-74052738 | Msa0702410:intron | 55.0% |
| GCACGGCTTAGCGCTGTTTA+TGG | - | chr4_4:74054205-74054224 | Msa0702410:intron | 55.0% | |
| CGGCTTAGCGCTGTTTATGG+AGG | - | chr4_4:74054208-74054227 | Msa0702410:intron | 55.0% | |
| GGCTAGGGAAAGAAAGGCTG+TGG | - | chr4_4:74054675-74054694 | Msa0702410:intron | 55.0% | |
| !! | CATTGGTGTTGGGGATCGGA+TGG | + | chr4_4:74055822-74055841 | None:intergenic | 55.0% |
| GGCTCCAAATAGCCATCGGT+TGG | + | chr4_4:74056860-74056879 | None:intergenic | 55.0% | |
| ACCAGGGGTTTGACAGGAGA+GGG | + | chr4_4:74057075-74057094 | None:intergenic | 55.0% | |
| AACAGCACCAGGGGTTTGAC+AGG | + | chr4_4:74057081-74057100 | None:intergenic | 55.0% | |
| TCGAGAAAGGATAGTGCGGG+GGG | + | chr4_4:74057267-74057286 | None:intergenic | 55.0% | |
| CCCGCACTATCCTTTCTCGA+AGG | - | chr4_4:74057267-74057286 | Msa0702410:intron | 55.0% | |
| CAGCCCCGGTTCTCAAAAAC+AGG | + | chr4_4:74057548-74057567 | None:intergenic | 55.0% | |
| GAGAACCGGGGCTGTTATAG+TGG | - | chr4_4:74057554-74057573 | Msa0702410:intron | 55.0% | |
| AGCCATACAGCTGGTGTGTC+AGG | + | chr4_4:74058620-74058639 | None:intergenic | 55.0% | |
| AGAAACCTGGTCTGGCCCTT+TGG | - | chr4_4:74058870-74058889 | Msa0702410:intron | 55.0% | |
| TCTGGCCCTTTGGCTAAGCA+TGG | - | chr4_4:74058880-74058899 | Msa0702410:intron | 55.0% | |
| CGGAGATCGCAGTCGAAAGG+GGG | + | chr4_4:74052089-74052108 | None:intergenic | 60.0% | |
| GGGGATCGGATGGCTCATGA+TGG | + | chr4_4:74055812-74055831 | None:intergenic | 60.0% | |
| GGGTTTGACAGGAGAGGGAG+AGG | + | chr4_4:74057070-74057089 | None:intergenic | 60.0% | |
| TCCCTCTCCTGTCAAACCCC+TGG | - | chr4_4:74057071-74057090 | Msa0702410:intron | 60.0% | |
| CACCAGGGGTTTGACAGGAG+AGG | + | chr4_4:74057076-74057095 | None:intergenic | 60.0% | |
| CGAGAAAGGATAGTGCGGGG+GGG | + | chr4_4:74057266-74057285 | None:intergenic | 60.0% | |
| CTTAGCCAAAGGGCCAGACC+AGG | + | chr4_4:74058878-74058897 | None:intergenic | 60.0% | |
| ! | CGGCACTGAGATCCACAGTG+AGG | + | chr4_4:74059010-74059029 | None:intergenic | 60.0% |
| GCACAAGCGAGCATCTGGAG+GGG | + | chr4_4:74059225-74059244 | None:intergenic | 60.0% | |
| CGCACAAGCGAGCATCTGGA+GGG | + | chr4_4:74059226-74059245 | None:intergenic | 60.0% | |
| ACGCACAAGCGAGCATCTGG+AGG | + | chr4_4:74059227-74059246 | None:intergenic | 60.0% | |
| GAAAGGATAGTGCGGGGGGG+TGG | + | chr4_4:74057263-74057282 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 74051915 | 74059510 | 74051915 | ID=Msa0702410;Name=Msa0702410 |
| chr4_4 | mRNA | 74051915 | 74059510 | 74051915 | ID=Msa0702410-mRNA-1;Parent=Msa0702410;Name=Msa0702410-mRNA-1;_AED=0.06;_eAED=0.06;_QI=201|0.90|1|1|1|1|12|461|416 |
| chr4_4 | exon | 74051915 | 74052426 | 74051915 | ID=Msa0702410-mRNA-1:exon:22915;Parent=Msa0702410-mRNA-1 |
| chr4_4 | exon | 74052995 | 74053069 | 74052995 | ID=Msa0702410-mRNA-1:exon:22914;Parent=Msa0702410-mRNA-1 |
| chr4_4 | exon | 74053147 | 74053357 | 74053147 | ID=Msa0702410-mRNA-1:exon:22913;Parent=Msa0702410-mRNA-1 |
| chr4_4 | exon | 74055526 | 74055650 | 74055526 | ID=Msa0702410-mRNA-1:exon:22912;Parent=Msa0702410-mRNA-1 |
| chr4_4 | exon | 74055909 | 74056010 | 74055909 | ID=Msa0702410-mRNA-1:exon:22911;Parent=Msa0702410-mRNA-1 |
| chr4_4 | exon | 74057164 | 74057226 | 74057164 | ID=Msa0702410-mRNA-1:exon:22910;Parent=Msa0702410-mRNA-1 |
| chr4_4 | exon | 74057345 | 74057425 | 74057345 | ID=Msa0702410-mRNA-1:exon:22909;Parent=Msa0702410-mRNA-1 |
| chr4_4 | exon | 74057562 | 74057673 | 74057562 | ID=Msa0702410-mRNA-1:exon:22908;Parent=Msa0702410-mRNA-1 |
| chr4_4 | exon | 74058159 | 74058331 | 74058159 | ID=Msa0702410-mRNA-1:exon:22907;Parent=Msa0702410-mRNA-1 |
| chr4_4 | exon | 74058447 | 74058554 | 74058447 | ID=Msa0702410-mRNA-1:exon:22906;Parent=Msa0702410-mRNA-1 |
| chr4_4 | exon | 74059070 | 74059132 | 74059070 | ID=Msa0702410-mRNA-1:exon:22905;Parent=Msa0702410-mRNA-1 |
| chr4_4 | exon | 74059223 | 74059510 | 74059223 | ID=Msa0702410-mRNA-1:exon:22904;Parent=Msa0702410-mRNA-1 |
| chr4_4 | five_prime_UTR | 74059310 | 74059510 | 74059310 | ID=Msa0702410-mRNA-1:five_prime_utr;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74059223 | 74059309 | 74059223 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74059070 | 74059132 | 74059070 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74058447 | 74058554 | 74058447 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74058159 | 74058331 | 74058159 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74057562 | 74057673 | 74057562 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74057345 | 74057425 | 74057345 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74057164 | 74057226 | 74057164 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74055909 | 74056010 | 74055909 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74055526 | 74055650 | 74055526 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74053147 | 74053357 | 74053147 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74052995 | 74053069 | 74052995 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | CDS | 74052376 | 74052426 | 74052376 | ID=Msa0702410-mRNA-1:cds;Parent=Msa0702410-mRNA-1 |
| chr4_4 | three_prime_UTR | 74051915 | 74052375 | 74051915 | ID=Msa0702410-mRNA-1:three_prime_utr;Parent=Msa0702410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
