AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0880450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0880450 MtrunA17_Chr8g0386251 97.840 324 7 0 1 324 1 324 0.0 657
Msa0880450 MtrunA17_Chr5g0431171 34.395 157 97 2 15 171 80 230 1.79e-14 74.3
Msa0880450 MtrunA17_Chr5g0431151 35.669 157 95 3 15 171 81 231 1.94e-14 74.3
Msa0880450 MtrunA17_Chr4g0024601 28.571 203 125 6 10 207 2 189 5.84e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0880450 AT4G24940.1 71.562 320 91 0 4 323 2 321 2.63e-178 496
Msa0880450 AT5G50580.2 71.519 316 90 0 4 319 2 317 4.89e-174 485
Msa0880450 AT5G50680.1 71.519 316 90 0 4 319 2 317 4.89e-174 485
Msa0880450 AT5G50580.1 70.886 316 90 1 4 319 2 315 1.59e-170 476
Msa0880450 AT5G50680.2 70.886 316 90 1 4 319 2 315 1.59e-170 476
Msa0880450 AT2G30110.1 36.943 157 93 2 15 171 77 227 1.37e-16 81.3
Msa0880450 AT5G06460.1 34.395 157 97 3 15 171 74 224 2.09e-14 74.7
Msa0880450 AT2G32410.3 29.861 144 95 3 10 150 2 142 3.25e-12 67.4
Msa0880450 AT2G32410.1 29.861 144 95 3 10 150 2 142 3.29e-12 67.4
Msa0880450 AT2G32410.2 29.861 144 95 3 10 150 2 142 3.96e-12 67.0
Msa0880450 AT1G05180.1 28.671 143 96 3 16 155 24 163 8.26e-11 63.2

Find 125 sgRNAs with CRISPR-Local

Find 447 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAGTTTCTGCTGTTAT+TGG 0.120073 6_1:+27058471 Msa0880450:CDS
AAAGCTCATGTCTTAGTTTA+TGG 0.134275 6_1:+27053285 Msa0880450:CDS
GGAAATCTTGGTTGTTAATA+TGG 0.151575 6_1:+27058742 Msa0880450:three_prime_UTR
ATTTAGAGCGTTGACGATTT+AGG 0.185755 6_1:+27058859 Msa0880450:three_prime_UTR
CTCCAGTTTCTGCTGTTATT+GGG 0.194555 6_1:+27058472 Msa0880450:CDS
GAGGTTATCAAAGCAATTTC+TGG 0.209705 6_1:+27058591 Msa0880450:CDS
CAAGTGTATGTTTAGGAATT+AGG 0.233371 6_1:-27059283 None:intergenic
AAATATAACCAGCTTCTTTC+GGG 0.238266 6_1:-27058992 None:intergenic
CAATGTTCTTAAGCTGAAAA+AGG 0.245988 6_1:+27058287 Msa0880450:CDS
AAAGCTTATGTTTATGATCT+AGG 0.255464 6_1:+27059090 Msa0880450:three_prime_UTR
TGACCGTCAGATTAGGGTTT+GGG 0.273281 6_1:+27053056 Msa0880450:CDS
TTTAGAGCGTTGACGATTTA+GGG 0.278454 6_1:+27058860 Msa0880450:three_prime_UTR
AAGCAGAAAATCGCGGTTAA+TGG 0.278696 6_1:-27052874 None:intergenic
TATCGGGCTCGAGTGTATTT+TGG 0.289757 6_1:+27059381 Msa0880450:three_prime_UTR
CTACACGTTTGGAAGCTTTC+CGG 0.296580 6_1:-27054358 None:intergenic
TTCTGAGTCACTGGAAATCT+TGG 0.301471 6_1:+27058730 Msa0880450:three_prime_UTR
TAAATATAACCAGCTTCTTT+CGG 0.302781 6_1:-27058993 None:intergenic
AGCTGGTTATATTTATGTTC+TGG 0.304268 6_1:+27059001 Msa0880450:three_prime_UTR
TCATGTGCCTGATACTCTTC+TGG 0.307495 6_1:+27058419 Msa0880450:CDS
CTTTGTATGACCGTCAGATT+AGG 0.312758 6_1:+27053049 Msa0880450:CDS
AACTTCAAAGACAGGTTTAC+CGG 0.332460 6_1:-27059033 None:intergenic
GACATATCTGATTCAAATAC+TGG 0.335424 6_1:+27058678 Msa0880450:CDS
GGCAGTGTTAAGGAGTAAAA+TGG 0.346884 6_1:-27059345 None:intergenic
GCTGGTTATATTTATGTTCT+GGG 0.359205 6_1:+27059002 Msa0880450:three_prime_UTR
GTTCGTGTCTTTGTGGATAA+AGG 0.360856 6_1:+27054006 Msa0880450:CDS
AGCTTGTTATGTCTATGTTC+TGG 0.364920 6_1:+27059177 Msa0880450:three_prime_UTR
CCTGATGAGAATGTGTATAA+TGG 0.366364 6_1:+27053931 Msa0880450:CDS
TAATCCAGTAGAGTACTAAA+TGG 0.374623 6_1:-27059452 None:intergenic
TCCTATGGTTCGTGTCTTTG+TGG 0.380042 6_1:+27053999 Msa0880450:CDS
AATCTTTCCAGAAGAGTATC+AGG 0.384196 6_1:-27058426 None:intergenic
GACCGGTCTATCGTCAATTA+AGG 0.388703 6_1:-27053872 None:intergenic
ACCTGTCTTTGAAGTTAGAA+AGG 0.389798 6_1:+27059040 Msa0880450:three_prime_UTR
GTTCGTCCAAGTGTATGTTT+AGG 0.395507 6_1:-27059290 None:intergenic
AGTATAAAATGCTACACGTT+TGG 0.407403 6_1:-27054369 None:intergenic
TCAAAGCAATTTCTGGGAAA+GGG 0.415897 6_1:+27058598 Msa0880450:CDS
CCATTATACACATTCTCATC+AGG 0.427583 6_1:-27053931 None:intergenic
TGCAAGAATATTGTTCTGGC+TGG 0.429331 6_1:+27053835 Msa0880450:CDS
ATGACCGTCAGATTAGGGTT+TGG 0.429457 6_1:+27053055 Msa0880450:CDS
AAATCCATTTAGTACTCTAC+TGG 0.431792 6_1:+27059448 Msa0880450:three_prime_UTR
TGAGAATGAAAATTCGTCTC+AGG 0.433611 6_1:-27052829 None:intergenic
GACTGTTGTTGGCAGTGTTA+AGG 0.435615 6_1:-27059355 None:intergenic
AGCTTTGATGTAGAATTCTT+CGG 0.436477 6_1:+27054179 Msa0880450:CDS
CGGCGACGGCGAAGAGTTAA+CGG 0.442404 6_1:+27053014 Msa0880450:CDS
TCCAGTTTCTGCTGTTATTG+GGG 0.444754 6_1:+27058473 Msa0880450:CDS
TTTGTATGACCGTCAGATTA+GGG 0.453191 6_1:+27053050 Msa0880450:CDS
GCCCGATAGGTGACTGTTGT+TGG 0.454305 6_1:-27059366 None:intergenic
ACTTAAAGACTTCAATCCTA+TGG 0.454595 6_1:+27053984 Msa0880450:CDS
AGGTTATCAAAGCAATTTCT+GGG 0.456843 6_1:+27058592 Msa0880450:CDS
AACCTACATACCTCAAAACT+TGG 0.457034 6_1:-27056913 None:intergenic
TTCAAAAGACAGCTTGCCCT+TGG 0.458407 6_1:-27058943 None:intergenic
TGATACTCTTCTGGAAAGAT+TGG 0.460712 6_1:+27058428 Msa0880450:CDS
GTCTCAGGGCGCGGAGGAGA+AGG 0.461835 6_1:-27052814 None:intergenic
TGAAAATTCGTCTCAGGGCG+CGG 0.471764 6_1:-27052823 None:intergenic
TATGTTCTGGGTTCTCCAGC+CGG 0.477087 6_1:+27059014 Msa0880450:three_prime_UTR
GAAGTTACAAATCCTCATGA+TGG 0.484490 6_1:+27058963 Msa0880450:three_prime_UTR
GCCTTTCTAACTTCAAAGAC+AGG 0.487916 6_1:-27059041 None:intergenic
TGCCAACAACAGTCACCTAT+CGG 0.495963 6_1:+27059364 Msa0880450:three_prime_UTR
GTCTTAGTTTATGGAATGAA+AGG 0.496608 6_1:+27053294 Msa0880450:CDS
ATCAAAGCAATTTCTGGGAA+AGG 0.498227 6_1:+27058597 Msa0880450:CDS
CTAATTCCTAAACATACACT+TGG 0.500327 6_1:+27059284 Msa0880450:three_prime_UTR
GATTCTCCAGCGGGTAAACC+TGG 0.505734 6_1:+27059199 Msa0880450:three_prime_UTR
GAGGCTGAAGGACGTAGTGC+GGG 0.514026 6_1:+27058240 Msa0880450:CDS
TACCTTGGAGGGCTCTTCAC+AGG 0.517069 6_1:+27057659 Msa0880450:CDS
AATATTGTTCTGGCTGGAGT+TGG 0.520269 6_1:+27053841 Msa0880450:CDS
CAAAGCAATTTCTGGGAAAG+GGG 0.521786 6_1:+27058599 Msa0880450:CDS
TACTGGAAAGTGACATCTCT+AGG 0.523786 6_1:+27058695 Msa0880450:exon
GCAGGACTATAAATATCAAA+AGG 0.525364 6_1:+27054433 Msa0880450:CDS
ATGCTCTATCAGTACCTTGG+AGG 0.531201 6_1:+27057647 Msa0880450:CDS
TCAAAGACAGGTTTACCGGC+TGG 0.535673 6_1:-27059029 None:intergenic
CCAGTTTCTGCTGTTATTGG+GGG 0.535744 6_1:+27058474 Msa0880450:CDS
GGTTCTGTCCCGAAAGAAGC+TGG 0.535753 6_1:+27058984 Msa0880450:three_prime_UTR
TTTGATGCTTCTGATGGGAA+GGG 0.536125 6_1:+27058645 Msa0880450:CDS
GCCAACAACAGTCACCTATC+GGG 0.539211 6_1:+27059365 Msa0880450:three_prime_UTR
GAAGTTAGAAAGGCTTGTGA+TGG 0.546828 6_1:+27059050 Msa0880450:three_prime_UTR
AAGCTGTACTTTGCAATGAG+AGG 0.549242 6_1:+27057691 Msa0880450:CDS
CGGCGAAGAGTTAACGGCGC+AGG 0.555211 6_1:+27053020 Msa0880450:CDS
AAAGGAGCTTTGTACTGCAC+AGG 0.559597 6_1:+27058305 Msa0880450:CDS
GACCTTAATTGACGATAGAC+CGG 0.560595 6_1:+27053870 Msa0880450:CDS
TATGTTCTGGATTCTCCAGC+GGG 0.561241 6_1:+27059190 Msa0880450:three_prime_UTR
TGCTCTATCAGTACCTTGGA+GGG 0.563387 6_1:+27057648 Msa0880450:CDS
ACCAATAAAATACCTGTCCA+AGG 0.563530 6_1:-27058500 None:intergenic
GAAAGCAATTCCTCAGTGAC+CGG 0.564416 6_1:-27053889 None:intergenic
GAAGGACCTTCTTTGAGCAT+CGG 0.566700 6_1:-27053082 None:intergenic
TCAAAGACAGGTTTACCCGC+TGG 0.570135 6_1:-27059117 None:intergenic
GACCATCAAAACATTCTCCA+AGG 0.571682 6_1:+27058926 Msa0880450:three_prime_UTR
GTCGTGAAACAGGTTGCGGT+TGG 0.571778 6_1:+27052984 Msa0880450:intron
GACCGTCAGATTAGGGTTTG+GGG 0.571834 6_1:+27053057 Msa0880450:CDS
TCTCAGGGCGCGGAGGAGAA+GGG 0.572989 6_1:-27052813 None:intergenic
GGGGTGCCGATGCTCAAAGA+AGG 0.577600 6_1:+27053076 Msa0880450:CDS
AAAATACACTCGAGCCCGAT+AGG 0.578312 6_1:-27059379 None:intergenic
TATGATCTAGGTTCTCCAGC+GGG 0.583654 6_1:+27059102 Msa0880450:three_prime_UTR
GTTAATGGAAGTTGAATTCG+CGG 0.583732 6_1:-27052859 None:intergenic
AGTAATAGAGAAGTTTGAAG+AGG 0.585773 6_1:+27058221 Msa0880450:intron
AATTAACCAGGTTTACCCGC+TGG 0.586277 6_1:-27059205 None:intergenic
AAGTTATAAAAGCCTCGTGA+TGG 0.589116 6_1:+27059139 Msa0880450:three_prime_UTR
GCGGAGGAGAAGGGAACTGT+CGG 0.589251 6_1:-27052804 None:intergenic
AGGATGCTCTATCAGTACCT+TGG 0.589322 6_1:+27057644 Msa0880450:intron
CTATGTTCTGGATTCTCCAG+CGG 0.598323 6_1:+27059189 Msa0880450:three_prime_UTR
GAACTGTCGGTGACTGTGAG+TGG 0.598402 6_1:-27052791 None:intergenic
GAGAAGTTTGAAGAGGCTGA+AGG 0.603485 6_1:+27058228 Msa0880450:CDS
GAGAATGAAAATTCGTCTCA+GGG 0.609737 6_1:-27052828 None:intergenic
CACCCCAAACCCTAATCTGA+CGG 0.611151 6_1:-27053059 None:intergenic
AGAGGCTGAAGGACGTAGTG+CGG 0.615684 6_1:+27058239 Msa0880450:CDS
CTCCTGTGAAGAGCCCTCCA+AGG 0.616479 6_1:-27057661 None:intergenic
GTATGTTTAGGAATTAGGAT+AGG 0.618900 6_1:-27059278 None:intergenic
ATCACAACAAAGCTGAGCAA+TGG 0.625931 6_1:-27053959 None:intergenic
TTCGGGACAGAACCATCATG+AGG 0.628267 6_1:-27058975 None:intergenic
TCCACAAAGACACGAACCAT+AGG 0.628657 6_1:-27054000 None:intergenic
TGTGCTGATTCAATTTGCGA+AGG 0.628672 6_1:-27059489 None:intergenic
CGGTGACTGTGAGTGGAATG+AGG 0.630545 6_1:-27052784 None:intergenic
ATGTATGAGTACAATTAACC+AGG 0.632707 6_1:-27059217 None:intergenic
TTATACACATTCTCATCAGG+AGG 0.644434 6_1:-27053928 None:intergenic
ACCATCAAAACATTCTCCAA+GGG 0.646004 6_1:+27058927 Msa0880450:three_prime_UTR
CGGTTGGAAATGAACGGCGA+CGG 0.646571 6_1:+27053000 Msa0880450:exon
GTGCTGATTCAATTTGCGAA+GGG 0.662799 6_1:-27059488 None:intergenic
AACAAATAAGCAGAAAATCG+CGG 0.667773 6_1:-27052881 None:intergenic
AATGAAAGGAACTATTGCTG+AGG 0.679461 6_1:+27053308 Msa0880450:CDS
GTTGACTGTAGAGATTCTTG+CGG 0.683545 6_1:+27054392 Msa0880450:CDS
TTCAGAACAGAACCATCACG+AGG 0.685793 6_1:-27059151 None:intergenic
CCAATAACAGCAGAAACTGG+AGG 0.697573 6_1:-27058471 None:intergenic
TTATGATCTAGGTTCTCCAG+CGG 0.697682 6_1:+27059101 Msa0880450:three_prime_UTR
AAATTCGTCTCAGGGCGCGG+AGG 0.699412 6_1:-27052820 None:intergenic
AGGTTGCGGTTGGAAATGAA+CGG 0.718698 6_1:+27052994 Msa0880450:intron
TGACGATAGACCGGTCACTG+AGG 0.739868 6_1:+27053879 Msa0880450:CDS
AATCTGACGGTCATACAAAG+CGG 0.741130 6_1:-27053046 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATTAGCAAAAATT+AGG - chr6_1:27053163-27053182 None:intergenic 10.0%
!! TAAAATAAAGTTAAATTGTT+TGG + chr6_1:27053480-27053499 Msa0880450:intron 10.0%
!!! AAATAGAAAAAGTTTTTTAT+GGG - chr6_1:27058627-27058646 None:intergenic 10.0%
!!! AAAATAGAAAAAGTTTTTTA+TGG - chr6_1:27058628-27058647 None:intergenic 10.0%
!! TAGTAATTTAGAAAATAGAA+AGG - chr6_1:27053107-27053126 None:intergenic 15.0%
!!! TTTTTTCCTAATGATTTATT+AGG + chr6_1:27053786-27053805 Msa0880450:intron 15.0%
!! TGAACAATTAAAATTACAAT+TGG - chr6_1:27055037-27055056 None:intergenic 15.0%
!! TCTTATAAAAAAAAATGGTT+TGG - chr6_1:27055409-27055428 None:intergenic 15.0%
!! AAAATCCTTTAATTAAACTT+AGG + chr6_1:27056988-27057007 Msa0880450:intron 15.0%
!! AAATCCTTTAATTAAACTTA+GGG + chr6_1:27056989-27057008 Msa0880450:intron 15.0%
!!! TCAAAATTATTGAATTTTGT+TGG + chr6_1:27057316-27057335 Msa0880450:intron 15.0%
!!! AAACATAAGCTTTTTTTTTT+CGG - chr6_1:27059083-27059102 None:intergenic 15.0%
!! AATTTAGAAAATAGAAAGGA+AGG - chr6_1:27053103-27053122 None:intergenic 20.0%
!!! TAAGTAACTTTTGTTAGTTT+AGG + chr6_1:27053131-27053150 Msa0880450:intron 20.0%
!!! AAAAGCTATTTCTATAACTA+AGG + chr6_1:27053456-27053475 Msa0880450:intron 20.0%
!! AAAAGAAAACAACTTGATAA+GGG - chr6_1:27054048-27054067 None:intergenic 20.0%
!! AAAAAGAAAACAACTTGATA+AGG - chr6_1:27054049-27054068 None:intergenic 20.0%
!!! TTACACTTGTTTTTTTTTTG+TGG + chr6_1:27054068-27054087 Msa0880450:intron 20.0%
!!! AGACTTCAAGTTTTTTTTTT+CGG + chr6_1:27054093-27054112 Msa0880450:intron 20.0%
!! AAGAAGATAATCAATGTAAA+GGG - chr6_1:27054678-27054697 None:intergenic 20.0%
!! AAAGAAGATAATCAATGTAA+AGG - chr6_1:27054679-27054698 None:intergenic 20.0%
!! AGTATTCTTAATGATGTTTA+TGG + chr6_1:27054949-27054968 Msa0880450:intron 20.0%
!! AGATAAATGTGATATCAATT+CGG - chr6_1:27055064-27055083 None:intergenic 20.0%
!! GCAGTTCTTATAAAAAAAAA+TGG - chr6_1:27055414-27055433 None:intergenic 20.0%
!! AAAAGAGAAAAATCAGAAAA+TGG - chr6_1:27055535-27055554 None:intergenic 20.0%
!!! CAATTTTTATAGACATAGTT+CGG + chr6_1:27056561-27056580 Msa0880450:intron 20.0%
!!! GGATTTTTAACAAAAGATAA+AGG - chr6_1:27056975-27056994 None:intergenic 20.0%
!!! TTCCAATGATATTTTTTATG+TGG + chr6_1:27057052-27057071 Msa0880450:intron 20.0%
!! TTCCACATAAAAAATATCAT+TGG - chr6_1:27057057-27057076 None:intergenic 20.0%
!! TAATGTTACAATAGTAAATC+TGG - chr6_1:27058568-27058587 None:intergenic 20.0%
!! ATTTACTATTGTAACATTAC+AGG + chr6_1:27058569-27058588 Msa0880450:intron 20.0%
!!! TTTTTACTGTTGGTTAAGTT+TGG + chr6_1:27052915-27052934 Msa0880450:intron 25.0%
!! CGTTAAAGGAAATTTGAAAT+TGG - chr6_1:27052965-27052984 None:intergenic 25.0%
! TTAAACTGTTTATCCAAACA+TGG - chr6_1:27053391-27053410 None:intergenic 25.0%
!!! ACAGTTTAATTTGAAGCTTA+TGG + chr6_1:27053402-27053421 Msa0880450:intron 25.0%
! ACATAATTGCTTATGATAAG+TGG - chr6_1:27053526-27053545 None:intergenic 25.0%
! TTGTGAAAAACAAGTTATCT+TGG + chr6_1:27053607-27053626 Msa0880450:intron 25.0%
! AAGAACCTGTAAGATAATTT+CGG - chr6_1:27053697-27053716 None:intergenic 25.0%
!! TTAAATAAGGCATTCCAAAA+AGG + chr6_1:27053733-27053752 Msa0880450:intron 25.0%
! CTAATGATTTATTAGGACTT+CGG + chr6_1:27053793-27053812 Msa0880450:intron 25.0%
! AAAGAAAACAACTTGATAAG+GGG - chr6_1:27054047-27054066 None:intergenic 25.0%
!!! GACTTCAAGTTTTTTTTTTC+GGG + chr6_1:27054094-27054113 Msa0880450:intron 25.0%
! TCATATGATAACCAATAGTT+AGG + chr6_1:27054577-27054596 Msa0880450:intron 25.0%
! ATCATGAAAATAAATGCATG+GGG - chr6_1:27054718-27054737 None:intergenic 25.0%
! CATCATGAAAATAAATGCAT+GGG - chr6_1:27054719-27054738 None:intergenic 25.0%
! TCATCATGAAAATAAATGCA+TGG - chr6_1:27054720-27054739 None:intergenic 25.0%
!!! TGCATTTATTTTCATGATGA+TGG + chr6_1:27054720-27054739 Msa0880450:intron 25.0%
! ATTTATGACACTGATGAATA+TGG + chr6_1:27054768-27054787 Msa0880450:intron 25.0%
! ATTGATATCACATTTATCTC+AGG + chr6_1:27055065-27055084 Msa0880450:intron 25.0%
! CTAAAATGTTCATCACAATT+AGG + chr6_1:27055100-27055119 Msa0880450:intron 25.0%
! GTACTTCTAAACTATTGTTA+TGG - chr6_1:27055165-27055184 None:intergenic 25.0%
! TTCTAAACTATTGTTATGGT+CGG - chr6_1:27055161-27055180 None:intergenic 25.0%
! GTACTTCTAAACTATTGTTA+TGG - chr6_1:27055165-27055184 None:intergenic 25.0%
! AAAATTGTATAGAGACAGAT+CGG - chr6_1:27055379-27055398 None:intergenic 25.0%
!!! AACTGCTATACCAATTTTTT+TGG + chr6_1:27055428-27055447 Msa0880450:intron 25.0%
! AGAAAAAGAATCAGAGATAT+GGG - chr6_1:27055457-27055476 None:intergenic 25.0%
! AAGAAAAAGAATCAGAGATA+TGG - chr6_1:27055458-27055477 None:intergenic 25.0%
! AATAGAGAGAATGAAAGAAA+AGG + chr6_1:27056405-27056424 Msa0880450:intron 25.0%
! ATAGAGAGAATGAAAGAAAA+GGG + chr6_1:27056406-27056425 Msa0880450:intron 25.0%
! CAAAAAAAGAATCAGATATG+TGG + chr6_1:27056489-27056508 Msa0880450:intron 25.0%
! GCAGTTCTTCATAAAATAAA+CGG + chr6_1:27056532-27056551 Msa0880450:intron 25.0%
! TCTTCATAAAATAAACGGTT+TGG + chr6_1:27056537-27056556 Msa0880450:intron 25.0%
! TTTAATGTTCTATTCTTCCT+TGG + chr6_1:27056848-27056867 Msa0880450:intron 25.0%
! TAAAATGCAACAATAATGAC+AGG - chr6_1:27056941-27056960 None:intergenic 25.0%
! AAGACCCTAAGTTTAATTAA+AGG - chr6_1:27056996-27057015 None:intergenic 25.0%
! AAATAGAAGATCTGCAATTA+GGG + chr6_1:27057373-27057392 Msa0880450:intron 25.0%
! TGATCTTCTATGTATATGTT+TGG + chr6_1:27057419-27057438 Msa0880450:intron 25.0%
! GATCTTCTATGTATATGTTT+GGG + chr6_1:27057420-27057439 Msa0880450:intron 25.0%
! TGGATAAAATGTGTGAAATA+AGG + chr6_1:27057739-27057758 Msa0880450:intron 25.0%
! TAAATATAACCAGCTTCTTT+CGG - chr6_1:27058996-27059015 None:intergenic 25.0%
! AAAGCTTATGTTTATGATCT+AGG + chr6_1:27059090-27059109 Msa0880450:three_prime_UTR 25.0%
!!! TTTGGTATTTTTGCAATGTT+TGG + chr6_1:27059399-27059418 Msa0880450:three_prime_UTR 25.0%
!!! TTGGTATTTTTGCAATGTTT+GGG + chr6_1:27059400-27059419 Msa0880450:three_prime_UTR 25.0%
AACAAATAAGCAGAAAATCG+CGG - chr6_1:27052884-27052903 None:intergenic 30.0%
!!! GTTTCTCACTTTTTTACTGT+TGG + chr6_1:27052905-27052924 Msa0880450:intron 30.0%
AAAGCTCATGTCTTAGTTTA+TGG + chr6_1:27053285-27053304 Msa0880450:CDS 30.0%
GTCTTAGTTTATGGAATGAA+AGG + chr6_1:27053294-27053313 Msa0880450:CDS 30.0%
AAACCTATCACTTGTCTATA+TGG + chr6_1:27053332-27053351 Msa0880450:intron 30.0%
TTACCATATAGACAAGTGAT+AGG - chr6_1:27053338-27053357 None:intergenic 30.0%
TGACTTAGACCAACATAATT+TGG + chr6_1:27053365-27053384 Msa0880450:intron 30.0%
TCAGTTGACAAGCTTAAATA+AGG + chr6_1:27053720-27053739 Msa0880450:intron 30.0%
CGAAGTCCTAATAAATCATT+AGG - chr6_1:27053795-27053814 None:intergenic 30.0%
! GTTTTGCAAGAATATTGTTC+TGG + chr6_1:27053831-27053850 Msa0880450:intron 30.0%
ACTTAAAGACTTCAATCCTA+TGG + chr6_1:27053984-27054003 Msa0880450:CDS 30.0%
! AGCTTTGATGTAGAATTCTT+CGG + chr6_1:27054179-27054198 Msa0880450:CDS 30.0%
AGTATAAAATGCTACACGTT+TGG - chr6_1:27054372-27054391 None:intergenic 30.0%
GCAGGACTATAAATATCAAA+AGG + chr6_1:27054433-27054452 Msa0880450:CDS 30.0%
TCAAATTCGACATACATACT+CGG - chr6_1:27054528-27054547 None:intergenic 30.0%
TATGTATGTCGAATTTGAAC+CGG + chr6_1:27054530-27054549 Msa0880450:intron 30.0%
AACCAATAGTTAGGCATATA+CGG + chr6_1:27054586-27054605 Msa0880450:intron 30.0%
!!! TTGGTAACGCATTTTGTTTT+CGG - chr6_1:27054643-27054662 None:intergenic 30.0%
CTTAATGATGTTTATGGTAG+TGG + chr6_1:27054955-27054974 Msa0880450:intron 30.0%
!! ATAGTTTAGAAGTACTGAAC+TGG + chr6_1:27055170-27055189 Msa0880450:intron 30.0%
ATATGGGGAACCAAAAAAAT+TGG - chr6_1:27055441-27055460 None:intergenic 30.0%
GAAAAAGAATCAGAGATATG+GGG - chr6_1:27055456-27055475 None:intergenic 30.0%
AGAGAAAAATCAGAAAATGG+TGG - chr6_1:27055532-27055551 None:intergenic 30.0%
CTACAAATGATTGTATTACG+AGG + chr6_1:27055582-27055601 Msa0880450:intron 30.0%
!! ATGGAAGATGCAATTTTGAT+AGG + chr6_1:27055850-27055869 Msa0880450:intron 30.0%
AAAAATAGACTCTTAAGTCG+TGG - chr6_1:27056025-27056044 None:intergenic 30.0%
!! CGAGATTTTGATAGAAGATA+GGG - chr6_1:27056051-27056070 None:intergenic 30.0%
!! ACGAGATTTTGATAGAAGAT+AGG - chr6_1:27056052-27056071 None:intergenic 30.0%
TGAAGTTAGAACTTGAAGAA+TGG + chr6_1:27056216-27056235 Msa0880450:intron 30.0%
TTAAAAAAAAACGGTGGTGT+TGG + chr6_1:27056272-27056291 Msa0880450:intron 30.0%
TAGATTGGCAATGTGAAATT+AGG + chr6_1:27056326-27056345 Msa0880450:intron 30.0%
TTCTTCTTCAAACTATGCTA+CGG - chr6_1:27056387-27056406 None:intergenic 30.0%
GAATGAAAGAAAAGGGAAAA+TGG + chr6_1:27056413-27056432 Msa0880450:intron 30.0%
TGTTATAATGTTAGCTGAAC+CGG - chr6_1:27056601-27056620 None:intergenic 30.0%
CAGCTAACATTATAACAGTT+TGG + chr6_1:27056604-27056623 Msa0880450:intron 30.0%
! TGTTGGCTATTTGACAATAA+TGG + chr6_1:27056698-27056717 Msa0880450:intron 30.0%
!! TGTAACAAATTGCTTTTGCT+GGG + chr6_1:27056764-27056783 Msa0880450:intron 30.0%
! GTGCTAATTATCTAGAACTT+TGG - chr6_1:27056791-27056810 None:intergenic 30.0%
!! CAAAACTTGGATATTTTAGG+TGG - chr6_1:27056903-27056922 None:intergenic 30.0%
! CCTCAAAACTTGGATATTTT+AGG - chr6_1:27056906-27056925 None:intergenic 30.0%
! CCTAAAATATCCAAGTTTTG+AGG + chr6_1:27056903-27056922 Msa0880450:CDS 30.0%
TCTAATGCAAGTAAATGACT+GGG - chr6_1:27057148-27057167 None:intergenic 30.0%
ATCTAATGCAAGTAAATGAC+TGG - chr6_1:27057149-27057168 None:intergenic 30.0%
TGAATTTAACATAACCCCAT+GGG - chr6_1:27057173-27057192 None:intergenic 30.0%
ATGAATTTAACATAACCCCA+TGG - chr6_1:27057174-27057193 None:intergenic 30.0%
AGAGAATCTAATGTACAACA+TGG - chr6_1:27057288-27057307 None:intergenic 30.0%
!!! TTGGTTTTGCTTTAAGACAA+TGG + chr6_1:27057335-27057354 Msa0880450:intron 30.0%
CAAATAGAAGATCTGCAATT+AGG + chr6_1:27057372-27057391 Msa0880450:intron 30.0%
!!! ATGAGTTTGTTTTGGACATA+AGG - chr6_1:27057516-27057535 None:intergenic 30.0%
!! TACATAGCATGAGTTTGTTT+TGG - chr6_1:27057524-27057543 None:intergenic 30.0%
! GTTTAGAACTTCATATTCCT+AGG + chr6_1:27057599-27057618 Msa0880450:intron 30.0%
! AAAAAGAAAAAGGCATACCT+AGG - chr6_1:27057619-27057638 None:intergenic 30.0%
ATCCTGTAGCAAAAAGAAAA+AGG - chr6_1:27057629-27057648 None:intergenic 30.0%
!!! TAAGCTATGCAACTTTTTTG+TGG + chr6_1:27057719-27057738 Msa0880450:intron 30.0%
TATTCAAGTCAATTAAGAGC+TGG + chr6_1:27057768-27057787 Msa0880450:intron 30.0%
!! TAGTTGATTTGGTTTCATCT+CGG + chr6_1:27057935-27057954 Msa0880450:intron 30.0%
AATTGCAATCGATAAACTTC+AGG - chr6_1:27058148-27058167 None:intergenic 30.0%
AGTAATAGAGAAGTTTGAAG+AGG + chr6_1:27058221-27058240 Msa0880450:intron 30.0%
!!! CTTTTTCAGCTTAAGAACAT+TGG - chr6_1:27058289-27058308 None:intergenic 30.0%
CAATGTTCTTAAGCTGAAAA+AGG + chr6_1:27058287-27058306 Msa0880450:CDS 30.0%
TGTAATGTAAACAGAAGGAT+TGG - chr6_1:27058384-27058403 None:intergenic 30.0%
! AGGTATTTTATTGGTCATCA+TGG + chr6_1:27058508-27058527 Msa0880450:intron 30.0%
TACTATTGTAACATTACAGG+AGG + chr6_1:27058572-27058591 Msa0880450:intron 30.0%
AGGTTATCAAAGCAATTTCT+GGG + chr6_1:27058592-27058611 Msa0880450:CDS 30.0%
!!! TTCTATTTTGATGCTTCTGA+TGG + chr6_1:27058639-27058658 Msa0880450:CDS 30.0%
!!! TCTATTTTGATGCTTCTGAT+GGG + chr6_1:27058640-27058659 Msa0880450:CDS 30.0%
GACATATCTGATTCAAATAC+TGG + chr6_1:27058678-27058697 Msa0880450:CDS 30.0%
GGAAATCTTGGTTGTTAATA+TGG + chr6_1:27058742-27058761 Msa0880450:three_prime_UTR 30.0%
AAATATAACCAGCTTCTTTC+GGG - chr6_1:27058995-27059014 None:intergenic 30.0%
AGCTGGTTATATTTATGTTC+TGG + chr6_1:27059001-27059020 Msa0880450:three_prime_UTR 30.0%
GCTGGTTATATTTATGTTCT+GGG + chr6_1:27059002-27059021 Msa0880450:three_prime_UTR 30.0%
! GCTTTTATAACTTCAAAGAC+AGG - chr6_1:27059132-27059151 None:intergenic 30.0%
ATGTATGAGTACAATTAACC+AGG - chr6_1:27059220-27059239 None:intergenic 30.0%
GTATGTTTAGGAATTAGGAT+AGG - chr6_1:27059281-27059300 None:intergenic 30.0%
CAAGTGTATGTTTAGGAATT+AGG - chr6_1:27059286-27059305 None:intergenic 30.0%
CTAATTCCTAAACATACACT+TGG + chr6_1:27059284-27059303 Msa0880450:three_prime_UTR 30.0%
AAATCCATTTAGTACTCTAC+TGG + chr6_1:27059448-27059467 Msa0880450:three_prime_UTR 30.0%
! TAATCCAGTAGAGTACTAAA+TGG - chr6_1:27059455-27059474 None:intergenic 30.0%
GAGAATGAAAATTCGTCTCA+GGG - chr6_1:27052831-27052850 None:intergenic 35.0%
TGAGAATGAAAATTCGTCTC+AGG - chr6_1:27052832-27052851 None:intergenic 35.0%
GTTAATGGAAGTTGAATTCG+CGG - chr6_1:27052862-27052881 None:intergenic 35.0%
TTTGTATGACCGTCAGATTA+GGG + chr6_1:27053050-27053069 Msa0880450:CDS 35.0%
AATGAAAGGAACTATTGCTG+AGG + chr6_1:27053308-27053327 Msa0880450:CDS 35.0%
CAAACATGGCCAAATTATGT+TGG - chr6_1:27053377-27053396 None:intergenic 35.0%
CAACATAATTTGGCCATGTT+TGG + chr6_1:27053375-27053394 Msa0880450:intron 35.0%
GTTCTCCGAAATTATCTTAC+AGG + chr6_1:27053689-27053708 Msa0880450:intron 35.0%
! TTTCACACACTAAGCCTTTT+TGG - chr6_1:27053750-27053769 None:intergenic 35.0%
AAAAGGCTTAGTGTGTGAAA+TGG + chr6_1:27053750-27053769 Msa0880450:intron 35.0%
AAAGGCTTAGTGTGTGAAAT+GGG + chr6_1:27053751-27053770 Msa0880450:intron 35.0%
TTATACACATTCTCATCAGG+AGG - chr6_1:27053931-27053950 None:intergenic 35.0%
CCATTATACACATTCTCATC+AGG - chr6_1:27053934-27053953 None:intergenic 35.0%
CCTGATGAGAATGTGTATAA+TGG + chr6_1:27053931-27053950 Msa0880450:CDS 35.0%
AAAACAACTTGATAAGGGGA+GGG - chr6_1:27054043-27054062 None:intergenic 35.0%
! AAGGAGTTTTCACTGTACTT+TGG - chr6_1:27054246-27054265 None:intergenic 35.0%
AGTAGCAAAAACATGGAAGA+AGG - chr6_1:27054265-27054284 None:intergenic 35.0%
AACTAGCCAATGAAAAATGC+CGG + chr6_1:27054339-27054358 Msa0880450:CDS 35.0%
! TGAAGTTTTTGTTGATCTGC+AGG + chr6_1:27054415-27054434 Msa0880450:CDS 35.0%
TGTGACAAATTAGATCCACA+GGG - chr6_1:27054465-27054484 None:intergenic 35.0%
AACAAGAGATCAATTGTGAC+CGG - chr6_1:27054552-27054571 None:intergenic 35.0%
ATCCGTATATGCCTAACTAT+TGG - chr6_1:27054591-27054610 None:intergenic 35.0%
TAAAGGGAAGTAACACAGTT+TGG - chr6_1:27054662-27054681 None:intergenic 35.0%
AATAAATGCATGGGGATTGA+CGG - chr6_1:27054710-27054729 None:intergenic 35.0%
TAAAGTCATCATCGTCTGTA+AGG + chr6_1:27054802-27054821 Msa0880450:intron 35.0%
!!! ATTTTCCCTTACTGACTTCT+AGG - chr6_1:27054854-27054873 None:intergenic 35.0%
AGTCAGTAAGGGAAAATTTG+AGG + chr6_1:27054857-27054876 Msa0880450:intron 35.0%
GTTTCCTGCTTTATGTGATT+TGG - chr6_1:27054884-27054903 None:intergenic 35.0%
!! TGATGTTTATGGTAGTGGAT+AGG + chr6_1:27054960-27054979 Msa0880450:intron 35.0%
! CAGTTAATTTCAGTGCGTTT+TGG - chr6_1:27055012-27055031 None:intergenic 35.0%
ATCACAATTAGGACTGTTCA+TGG + chr6_1:27055111-27055130 Msa0880450:intron 35.0%
ATCAAACCACTAATCCAGTT+CGG - chr6_1:27055221-27055240 None:intergenic 35.0%
!! ATAGTTTAGAAGTACTGACC+TGG + chr6_1:27055279-27055298 Msa0880450:intron 35.0%
AATCCAGTTCAGTTCAGTTT+GGG - chr6_1:27055319-27055338 None:intergenic 35.0%
TAATCCAGTTCAGTTCAGTT+TGG - chr6_1:27055320-27055339 None:intergenic 35.0%
AAGCGGTGATGTGAAAAATT+GGG - chr6_1:27055498-27055517 None:intergenic 35.0%
GATGACACTTCATCATTGTT+CGG - chr6_1:27055758-27055777 None:intergenic 35.0%
! TCATCGACTATGATGATGAA+GGG + chr6_1:27055773-27055792 Msa0880450:intron 35.0%
TGCATCTTCCATTCTATCTA+CGG - chr6_1:27055842-27055861 None:intergenic 35.0%
GAAACAATACTCTTAAGTCG+TGG + chr6_1:27055883-27055902 Msa0880450:intron 35.0%
TTGGCAATGTGAAATTAGGA+AGG + chr6_1:27056330-27056349 Msa0880450:intron 35.0%
TGGCAATGTGAAATTAGGAA+GGG + chr6_1:27056331-27056350 Msa0880450:intron 35.0%
TCTTCTTCAAACTATGCTAC+GGG - chr6_1:27056386-27056405 None:intergenic 35.0%
TGAAAGAAAAGGGAAAATGG+TGG + chr6_1:27056416-27056435 Msa0880450:intron 35.0%
! ACTCCTAATTTTTCACACCA+CGG - chr6_1:27056455-27056474 None:intergenic 35.0%
AGATATGGGCAAAACAAACA+AGG - chr6_1:27056743-27056762 None:intergenic 35.0%
TTCTAGATAATTAGCACCTG+TGG + chr6_1:27056794-27056813 Msa0880450:intron 35.0%
TCTTCCTTGGCAGAAAAAAA+TGG + chr6_1:27056861-27056880 Msa0880450:intron 35.0%
!!! ATCCAAGTTTTGAGGTATGT+AGG + chr6_1:27056911-27056930 Msa0880450:intron 35.0%
AACCTACATACCTCAAAACT+TGG - chr6_1:27056916-27056935 None:intergenic 35.0%
GAACATATTGAGAGTCTTTG+GGG - chr6_1:27057035-27057054 None:intergenic 35.0%
GGAACATATTGAGAGTCTTT+GGG - chr6_1:27057036-27057055 None:intergenic 35.0%
TGGAACATATTGAGAGTCTT+TGG - chr6_1:27057037-27057056 None:intergenic 35.0%
ATGTGATAACCTTGACATGA+AGG + chr6_1:27057090-27057109 Msa0880450:intron 35.0%
ACCTTGACATGAAGGATATT+TGG + chr6_1:27057098-27057117 Msa0880450:intron 35.0%
ACCAAATATCCTTCATGTCA+AGG - chr6_1:27057102-27057121 None:intergenic 35.0%
TGTACATTAGATTCTCTTGC+AGG + chr6_1:27057291-27057310 Msa0880450:intron 35.0%
CATAGAAGATCAACACAGAA+TGG - chr6_1:27057411-27057430 None:intergenic 35.0%
!!! CTTGTGTGTTTGTTTTGCAA+TGG - chr6_1:27057464-27057483 None:intergenic 35.0%
ACAAACACACAAGCTTCTAA+AGG + chr6_1:27057471-27057490 Msa0880450:intron 35.0%
! TGCCTTTTTCTTTTTGCTAC+AGG + chr6_1:27057624-27057643 Msa0880450:intron 35.0%
GGTGTCTGGTCTAATATATT+AGG + chr6_1:27057805-27057824 Msa0880450:intron 35.0%
!!! TTCACGGGTTAGTTTAGTTT+TGG + chr6_1:27057886-27057905 Msa0880450:intron 35.0%
ATCAACTAAAGCAATCAGGT+TGG - chr6_1:27057923-27057942 None:intergenic 35.0%
CCAAATCAACTAAAGCAATC+AGG - chr6_1:27057927-27057946 None:intergenic 35.0%
CCTGATTGCTTTAGTTGATT+TGG + chr6_1:27057924-27057943 Msa0880450:intron 35.0%
AGTATAGAAACATGCCCTAA+TGG + chr6_1:27058065-27058084 Msa0880450:intron 35.0%
GAGACTGTAATGTAAACAGA+AGG - chr6_1:27058389-27058408 None:intergenic 35.0%
!! AATCTTTCCAGAAGAGTATC+AGG - chr6_1:27058429-27058448 None:intergenic 35.0%
! TGATACTCTTCTGGAAAGAT+TGG + chr6_1:27058428-27058447 Msa0880450:CDS 35.0%
! TCCTTGGACAGGTATTTTAT+TGG + chr6_1:27058499-27058518 Msa0880450:intron 35.0%
ACCAATAAAATACCTGTCCA+AGG - chr6_1:27058503-27058522 None:intergenic 35.0%
GAGGTTATCAAAGCAATTTC+TGG + chr6_1:27058591-27058610 Msa0880450:CDS 35.0%
! ATCAAAGCAATTTCTGGGAA+AGG + chr6_1:27058597-27058616 Msa0880450:CDS 35.0%
! TCAAAGCAATTTCTGGGAAA+GGG + chr6_1:27058598-27058617 Msa0880450:CDS 35.0%
! TGTTTCTTTTTCTGAGTCAC+TGG + chr6_1:27058721-27058740 Msa0880450:three_prime_UTR 35.0%
!! ATTTAGAGCGTTGACGATTT+AGG + chr6_1:27058859-27058878 Msa0880450:three_prime_UTR 35.0%
!! TTTAGAGCGTTGACGATTTA+GGG + chr6_1:27058860-27058879 Msa0880450:three_prime_UTR 35.0%
ACCATCAAAACATTCTCCAA+GGG + chr6_1:27058927-27058946 Msa0880450:three_prime_UTR 35.0%
GAAGTTACAAATCCTCATGA+TGG + chr6_1:27058963-27058982 Msa0880450:three_prime_UTR 35.0%
AACTTCAAAGACAGGTTTAC+CGG - chr6_1:27059036-27059055 None:intergenic 35.0%
!! ACCTGTCTTTGAAGTTAGAA+AGG + chr6_1:27059040-27059059 Msa0880450:three_prime_UTR 35.0%
AAGTTATAAAAGCCTCGTGA+TGG + chr6_1:27059139-27059158 Msa0880450:three_prime_UTR 35.0%
!! AGCTTGTTATGTCTATGTTC+TGG + chr6_1:27059177-27059196 Msa0880450:three_prime_UTR 35.0%
AAGCAGAAAATCGCGGTTAA+TGG - chr6_1:27052877-27052896 None:intergenic 40.0%
TTCCTTTAACGTCGTGAAAC+AGG + chr6_1:27052974-27052993 Msa0880450:intron 40.0%
AACCTGTTTCACGACGTTAA+AGG - chr6_1:27052979-27052998 None:intergenic 40.0%
AATCTGACGGTCATACAAAG+CGG - chr6_1:27053049-27053068 None:intergenic 40.0%
CTTTGTATGACCGTCAGATT+AGG + chr6_1:27053049-27053068 Msa0880450:CDS 40.0%
TGCAAGAATATTGTTCTGGC+TGG + chr6_1:27053835-27053854 Msa0880450:CDS 40.0%
! AATATTGTTCTGGCTGGAGT+TGG + chr6_1:27053841-27053860 Msa0880450:CDS 40.0%
GACCTTAATTGACGATAGAC+CGG + chr6_1:27053870-27053889 Msa0880450:CDS 40.0%
ATCACAACAAAGCTGAGCAA+TGG - chr6_1:27053962-27053981 None:intergenic 40.0%
GTTCGTGTCTTTGTGGATAA+AGG + chr6_1:27054006-27054025 Msa0880450:CDS 40.0%
AAACAACTTGATAAGGGGAG+GGG - chr6_1:27054042-27054061 None:intergenic 40.0%
GAAAACAACTTGATAAGGGG+AGG - chr6_1:27054044-27054063 None:intergenic 40.0%
GACAAGACGAACAAAAGAGA+AGG - chr6_1:27054143-27054162 None:intergenic 40.0%
! CTTTTGTTCGTCTTGTCTTC+AGG + chr6_1:27054146-27054165 Msa0880450:intron 40.0%
!! CTTCCATGTTTTTGCTACTC+TGG + chr6_1:27054266-27054285 Msa0880450:intron 40.0%
AAGCCAGAGTAGCAAAAACA+TGG - chr6_1:27054272-27054291 None:intergenic 40.0%
! AGCTTTCCGGCATTTTTCAT+TGG - chr6_1:27054348-27054367 None:intergenic 40.0%
GTTGACTGTAGAGATTCTTG+CGG + chr6_1:27054392-27054411 Msa0880450:CDS 40.0%
GTGACAAATTAGATCCACAG+GGG - chr6_1:27054464-27054483 None:intergenic 40.0%
CTGTGACAAATTAGATCCAC+AGG - chr6_1:27054466-27054485 None:intergenic 40.0%
AGGCTCTATCACTAATTGCA+AGG - chr6_1:27054834-27054853 None:intergenic 40.0%
ATAGAGCCTAGAAGTCAGTA+AGG + chr6_1:27054845-27054864 Msa0880450:intron 40.0%
TAGAGCCTAGAAGTCAGTAA+GGG + chr6_1:27054846-27054865 Msa0880450:intron 40.0%
AGGACCAAATCACATAAAGC+AGG + chr6_1:27054877-27054896 Msa0880450:intron 40.0%
!!! AGTTGGGCAGTTTTTTTACC+AGG - chr6_1:27054986-27055005 None:intergenic 40.0%
AATCCAGTTCGGTTCAGTTT+GGG - chr6_1:27055210-27055229 None:intergenic 40.0%
TAATCCAGTTCGGTTCAGTT+TGG - chr6_1:27055211-27055230 None:intergenic 40.0%
!! GAACTGGATTAGTGGTTTGA+TGG + chr6_1:27055220-27055239 Msa0880450:intron 40.0%
ATCCAGTTCAGTTCAGTTTG+GGG - chr6_1:27055318-27055337 None:intergenic 40.0%
! ACTGAACTGAACTGGATTAG+CGG + chr6_1:27055321-27055340 Msa0880450:intron 40.0%
GTGATGTGAAAAATTGGGAG+TGG - chr6_1:27055493-27055512 None:intergenic 40.0%
GAAGCGGTGATGTGAAAAAT+TGG - chr6_1:27055499-27055518 None:intergenic 40.0%
CGAGGTTTAGAAGAAGACAA+TGG + chr6_1:27055600-27055619 Msa0880450:intron 40.0%
GTGAAATTGTGAAGGGGTTT+GGG - chr6_1:27055634-27055653 None:intergenic 40.0%
TGTGAAATTGTGAAGGGGTT+TGG - chr6_1:27055635-27055654 None:intergenic 40.0%
!! TGGTGCTGTGAAATTGTGAA+GGG - chr6_1:27055641-27055660 None:intergenic 40.0%
!! TTGGTGCTGTGAAATTGTGA+AGG - chr6_1:27055642-27055661 None:intergenic 40.0%
TTTCACAGCACCAATGTCAT+CGG + chr6_1:27055648-27055667 Msa0880450:intron 40.0%
TGAACAGCAATTGATACTGC+TGG - chr6_1:27055682-27055701 None:intergenic 40.0%
! GCAGTATCAATTGCTGTTCA+AGG + chr6_1:27055682-27055701 Msa0880450:intron 40.0%
!! GTGGGTGGTCATTGATTTAT+TGG - chr6_1:27055715-27055734 None:intergenic 40.0%
GGAAACAACCACTTGATTAG+GGG - chr6_1:27055737-27055756 None:intergenic 40.0%
CGGAAACAACCACTTGATTA+GGG - chr6_1:27055738-27055757 None:intergenic 40.0%
TCGGAAACAACCACTTGATT+AGG - chr6_1:27055739-27055758 None:intergenic 40.0%
! GTCATCGACTATGATGATGA+AGG + chr6_1:27055772-27055791 Msa0880450:intron 40.0%
AGAGAAGTTGCCGGATTATT+TGG + chr6_1:27055810-27055829 Msa0880450:intron 40.0%
ATCTTCCATTCTATCTACGG+CGG - chr6_1:27055839-27055858 None:intergenic 40.0%
AGAGTGACAGTGTGTACAAA+TGG + chr6_1:27055912-27055931 Msa0880450:intron 40.0%
ATGACGGTGAGTACAAATTG+TGG - chr6_1:27055993-27056012 None:intergenic 40.0%
ATCAACTTCTTCCTCACATC+TGG + chr6_1:27056107-27056126 Msa0880450:intron 40.0%
ATTGTTCAGAACCAATCGCT+TGG + chr6_1:27056171-27056190 Msa0880450:intron 40.0%
ACGGCGGCGTTAAAAAAAAA+CGG + chr6_1:27056263-27056282 Msa0880450:intron 40.0%
ACATTGCCAATCTACAAGTG+GGG - chr6_1:27056320-27056339 None:intergenic 40.0%
CACATTGCCAATCTACAAGT+GGG - chr6_1:27056321-27056340 None:intergenic 40.0%
TCACATTGCCAATCTACAAG+TGG - chr6_1:27056322-27056341 None:intergenic 40.0%
GGCAATGTGAAATTAGGAAG+GGG + chr6_1:27056332-27056351 Msa0880450:intron 40.0%
CTTCTTCAAACTATGCTACG+GGG - chr6_1:27056385-27056404 None:intergenic 40.0%
GTGGTGTGAAAAATTAGGAG+TGG + chr6_1:27056454-27056473 Msa0880450:intron 40.0%
TTCGGTTCAAAATTCAGAGC+CGG + chr6_1:27056579-27056598 Msa0880450:intron 40.0%
! TTGGTTCTTCACCACTGTTA+TGG + chr6_1:27056623-27056642 Msa0880450:intron 40.0%
ACTGAACAGAACCATAACAG+TGG - chr6_1:27056637-27056656 None:intergenic 40.0%
ACAAACTACAATCGACAGCT+AGG - chr6_1:27056681-27056700 None:intergenic 40.0%
! AGCTGTCGATTGTAGTTTGT+TGG + chr6_1:27056681-27056700 Msa0880450:intron 40.0%
TCCTTGGCAGAAAAAAATGG+AGG + chr6_1:27056864-27056883 Msa0880450:intron 40.0%
!!! TCCTCCATTTTTTTCTGCCA+AGG - chr6_1:27056868-27056887 None:intergenic 40.0%
!! ATATTGAGAGTCTTTGGGGT+TGG - chr6_1:27057031-27057050 None:intergenic 40.0%
TTACTTGCATTAGATGCCCA+TGG + chr6_1:27057154-27057173 Msa0880450:intron 40.0%
TACTTGCATTAGATGCCCAT+GGG + chr6_1:27057155-27057174 Msa0880450:intron 40.0%
! TCCTTTTCCTGTCATGTACT+AGG + chr6_1:27057252-27057271 Msa0880450:intron 40.0%
ACCTAGTACATGACAGGAAA+AGG - chr6_1:27057256-27057275 None:intergenic 40.0%
AAGCTGTACTTTGCAATGAG+AGG + chr6_1:27057691-27057710 Msa0880450:CDS 40.0%
!! GAGCTGGAACTTTTAGTTGA+CGG + chr6_1:27057784-27057803 Msa0880450:intron 40.0%
!! AACTTTTAGTTGACGGTGTC+TGG + chr6_1:27057791-27057810 Msa0880450:intron 40.0%
ACTAAGTTAAGCCAAGAGAG+AGG + chr6_1:27057849-27057868 Msa0880450:intron 40.0%
TAAGCTCTCTCTCTCCATTA+GGG - chr6_1:27058082-27058101 None:intergenic 40.0%
CTCCAGTTTCTGCTGTTATT+GGG + chr6_1:27058472-27058491 Msa0880450:CDS 40.0%
TCCAGTTTCTGCTGTTATTG+GGG + chr6_1:27058473-27058492 Msa0880450:CDS 40.0%
! CAAAGCAATTTCTGGGAAAG+GGG + chr6_1:27058599-27058618 Msa0880450:CDS 40.0%
! TTTTGATGCTTCTGATGGGA+AGG + chr6_1:27058644-27058663 Msa0880450:CDS 40.0%
TTTGATGCTTCTGATGGGAA+GGG + chr6_1:27058645-27058664 Msa0880450:CDS 40.0%
TACTGGAAAGTGACATCTCT+AGG + chr6_1:27058695-27058714 Msa0880450:exon 40.0%
TTCTGAGTCACTGGAAATCT+TGG + chr6_1:27058730-27058749 Msa0880450:three_prime_UTR 40.0%
GACCATCAAAACATTCTCCA+AGG + chr6_1:27058926-27058945 Msa0880450:three_prime_UTR 40.0%
GCCTTTCTAACTTCAAAGAC+AGG - chr6_1:27059044-27059063 None:intergenic 40.0%
GAAGTTAGAAAGGCTTGTGA+TGG + chr6_1:27059050-27059069 Msa0880450:three_prime_UTR 40.0%
TTATGATCTAGGTTCTCCAG+CGG + chr6_1:27059101-27059120 Msa0880450:three_prime_UTR 40.0%
GTTCGTCCAAGTGTATGTTT+AGG - chr6_1:27059293-27059312 None:intergenic 40.0%
GGCAGTGTTAAGGAGTAAAA+TGG - chr6_1:27059348-27059367 None:intergenic 40.0%
!! GTGCTGATTCAATTTGCGAA+GGG - chr6_1:27059491-27059510 None:intergenic 40.0%
!! TGTGCTGATTCAATTTGCGA+AGG - chr6_1:27059492-27059511 None:intergenic 40.0%
TAACGTCGTGAAACAGGTTG+CGG + chr6_1:27052980-27052999 Msa0880450:intron 45.0%
AGGTTGCGGTTGGAAATGAA+CGG + chr6_1:27052994-27053013 Msa0880450:intron 45.0%
ATGACCGTCAGATTAGGGTT+TGG + chr6_1:27053055-27053074 Msa0880450:CDS 45.0%
TGACCGTCAGATTAGGGTTT+GGG + chr6_1:27053056-27053075 Msa0880450:CDS 45.0%
GAAGGACCTTCTTTGAGCAT+CGG - chr6_1:27053085-27053104 None:intergenic 45.0%
GACCGGTCTATCGTCAATTA+AGG - chr6_1:27053875-27053894 None:intergenic 45.0%
GAAAGCAATTCCTCAGTGAC+CGG - chr6_1:27053892-27053911 None:intergenic 45.0%
TCCTATGGTTCGTGTCTTTG+TGG + chr6_1:27053999-27054018 Msa0880450:CDS 45.0%
TCCACAAAGACACGAACCAT+AGG - chr6_1:27054003-27054022 None:intergenic 45.0%
CTACACGTTTGGAAGCTTTC+CGG - chr6_1:27054361-27054380 None:intergenic 45.0%
ACAAATTAGATCCACAGGGG+TGG - chr6_1:27054461-27054480 None:intergenic 45.0%
AGGAAACCTAGAGAACGCAA+AGG + chr6_1:27054897-27054916 Msa0880450:intron 45.0%
AACCTAGAGAACGCAAAGGT+TGG + chr6_1:27054901-27054920 Msa0880450:intron 45.0%
ACCTAGAGAACGCAAAGGTT+GGG + chr6_1:27054902-27054921 Msa0880450:intron 45.0%
CAAAGGTTGGGATGGATGAA+AGG + chr6_1:27054914-27054933 Msa0880450:intron 45.0%
!! TTTATGGTAGTGGATAGGCC+TGG + chr6_1:27054965-27054984 Msa0880450:intron 45.0%
!!! CAGTGCGTTTTGGTTCAGTT+GGG - chr6_1:27055002-27055021 None:intergenic 45.0%
!!! TCAGTGCGTTTTGGTTCAGT+TGG - chr6_1:27055003-27055022 None:intergenic 45.0%
ATCCAGTTCGGTTCAGTTTG+GGG - chr6_1:27055209-27055228 None:intergenic 45.0%
! ACTGAACCGAACTGGATTAG+TGG + chr6_1:27055212-27055231 Msa0880450:intron 45.0%
! GGATTAGTGGTTTGATGGAG+CGG + chr6_1:27055225-27055244 Msa0880450:intron 45.0%
TGGGGTATAACTAACTGTCC+AGG - chr6_1:27055191-27055210 None:intergenic 45.0%
TACCCCAAACTGAACTGAAC+TGG + chr6_1:27055313-27055332 Msa0880450:intron 45.0%
!! GAACTGGATTAGCGGTTTGA+TGG + chr6_1:27055329-27055348 Msa0880450:intron 45.0%
!!! TGGTGGTTTTGAGAGTGAAG+CGG - chr6_1:27055515-27055534 None:intergenic 45.0%
! GGTGCTGTGAAATTGTGAAG+GGG - chr6_1:27055640-27055659 None:intergenic 45.0%
ACAACCACTTGATTAGGGGT+GGG - chr6_1:27055733-27055752 None:intergenic 45.0%
AACAACCACTTGATTAGGGG+TGG - chr6_1:27055734-27055753 None:intergenic 45.0%
AGTTGTGAGAGAGAAGTTGC+CGG + chr6_1:27055801-27055820 Msa0880450:intron 45.0%
ACGGCGGTTTCCAAATAATC+CGG - chr6_1:27055823-27055842 None:intergenic 45.0%
GTCGTGGAATCTGAGAATGA+CGG - chr6_1:27056009-27056028 None:intergenic 45.0%
GTCTTTCATTCTATCCGCAG+CGG + chr6_1:27056070-27056089 Msa0880450:intron 45.0%
GCATGATCTATAAACCGCTG+CGG - chr6_1:27056087-27056106 None:intergenic 45.0%
ATGAAGGGATTCCAGATGTG+AGG - chr6_1:27056121-27056140 None:intergenic 45.0%
! ATGGCGGCAATGATGATGAA+GGG - chr6_1:27056136-27056155 None:intergenic 45.0%
TCAGAACCAATCGCTTGGTT+AGG + chr6_1:27056176-27056195 Msa0880450:intron 45.0%
ATCGCTGCAGGTTAAAGCAA+CGG + chr6_1:27056244-27056263 Msa0880450:intron 45.0%
GCGGCGTTAAAAAAAAACGG+TGG + chr6_1:27056266-27056285 Msa0880450:intron 45.0%
TGAGTTCCCCACTTGTAGAT+TGG + chr6_1:27056311-27056330 Msa0880450:intron 45.0%
GAGCCGTGGTGTGAAAAATT+AGG + chr6_1:27056449-27056468 Msa0880450:intron 45.0%
AAAGCAAGCACAGTATCCAC+AGG - chr6_1:27056813-27056832 None:intergenic 45.0%
! TGGTGCACTGATAACCTTGA+TGG + chr6_1:27057118-27057137 Msa0880450:intron 45.0%
AATGACTGGGTAAGCCATCA+AGG - chr6_1:27057135-27057154 None:intergenic 45.0%
ACTTGCATTAGATGCCCATG+GGG + chr6_1:27057156-27057175 Msa0880450:intron 45.0%
TCCTGTCATGTACTAGGTCT+AGG + chr6_1:27057258-27057277 Msa0880450:intron 45.0%
ACCTAGACCTAGTACATGAC+AGG - chr6_1:27057262-27057281 None:intergenic 45.0%
AGGATGCTCTATCAGTACCT+TGG + chr6_1:27057644-27057663 Msa0880450:intron 45.0%
ATGCTCTATCAGTACCTTGG+AGG + chr6_1:27057647-27057666 Msa0880450:CDS 45.0%
TGCTCTATCAGTACCTTGGA+GGG + chr6_1:27057648-27057667 Msa0880450:CDS 45.0%
AAGTTAAGCCAAGAGAGAGG+TGG + chr6_1:27057852-27057871 Msa0880450:intron 45.0%
GTAAGCTCTCTCTCTCCATT+AGG - chr6_1:27058083-27058102 None:intergenic 45.0%
GAGAAGTTTGAAGAGGCTGA+AGG + chr6_1:27058228-27058247 Msa0880450:CDS 45.0%
! AAAGGAGCTTTGTACTGCAC+AGG + chr6_1:27058305-27058324 Msa0880450:CDS 45.0%
! ACAGGTATGCTTGCTGGAAT+TGG + chr6_1:27058323-27058342 Msa0880450:intron 45.0%
TCATGTGCCTGATACTCTTC+TGG + chr6_1:27058419-27058438 Msa0880450:CDS 45.0%
CCAATAACAGCAGAAACTGG+AGG - chr6_1:27058474-27058493 None:intergenic 45.0%
CCTCCAGTTTCTGCTGTTAT+TGG + chr6_1:27058471-27058490 Msa0880450:CDS 45.0%
CCAGTTTCTGCTGTTATTGG+GGG + chr6_1:27058474-27058493 Msa0880450:CDS 45.0%
!! GCCCTTGGAGAATGTTTTGA+TGG - chr6_1:27058931-27058950 None:intergenic 45.0%
TTCAAAAGACAGCTTGCCCT+TGG - chr6_1:27058946-27058965 None:intergenic 45.0%
TATGATCTAGGTTCTCCAGC+GGG + chr6_1:27059102-27059121 Msa0880450:three_prime_UTR 45.0%
TTCAGAACAGAACCATCACG+AGG - chr6_1:27059154-27059173 None:intergenic 45.0%
! CTATGTTCTGGATTCTCCAG+CGG + chr6_1:27059189-27059208 Msa0880450:three_prime_UTR 45.0%
! TATGTTCTGGATTCTCCAGC+GGG + chr6_1:27059190-27059209 Msa0880450:three_prime_UTR 45.0%
AATTAACCAGGTTTACCCGC+TGG - chr6_1:27059208-27059227 None:intergenic 45.0%
GACTGTTGTTGGCAGTGTTA+AGG - chr6_1:27059358-27059377 None:intergenic 45.0%
TGCCAACAACAGTCACCTAT+CGG + chr6_1:27059364-27059383 Msa0880450:three_prime_UTR 45.0%
AAAATACACTCGAGCCCGAT+AGG - chr6_1:27059382-27059401 None:intergenic 45.0%
! TATCGGGCTCGAGTGTATTT+TGG + chr6_1:27059381-27059400 Msa0880450:three_prime_UTR 45.0%
TGAAAATTCGTCTCAGGGCG+CGG - chr6_1:27052826-27052845 None:intergenic 50.0%
GACCGTCAGATTAGGGTTTG+GGG + chr6_1:27053057-27053076 Msa0880450:CDS 50.0%
CACCCCAAACCCTAATCTGA+CGG - chr6_1:27053062-27053081 None:intergenic 50.0%
!! ATCAAAAGGTACCACCCCTG+TGG + chr6_1:27054447-27054466 Msa0880450:intron 50.0%
TCCCAACCTTTGCGTTCTCT+AGG - chr6_1:27054906-27054925 None:intergenic 50.0%
AGAGAACGCAAAGGTTGGGA+TGG + chr6_1:27054906-27054925 Msa0880450:intron 50.0%
TACCCCAAACTGAACCGAAC+TGG + chr6_1:27055204-27055223 Msa0880450:intron 50.0%
! GGATTAGCGGTTTGATGGAG+CGG + chr6_1:27055334-27055353 Msa0880450:intron 50.0%
GGTTGAAGCTCCGATGACAT+TGG - chr6_1:27055661-27055680 None:intergenic 50.0%
GGAAACCGCCGTAGATAGAA+TGG + chr6_1:27055831-27055850 Msa0880450:intron 50.0%
! GATGGCGGCAATGATGATGA+AGG - chr6_1:27056137-27056156 None:intergenic 50.0%
ATCATCATTGCCGCCATCGA+TGG + chr6_1:27056139-27056158 Msa0880450:intron 50.0%
CAATGACGAAGAGCCATCGA+TGG - chr6_1:27056155-27056174 None:intergenic 50.0%
ACCAATCGCTTGGTTAGGTG+TGG + chr6_1:27056181-27056200 Msa0880450:intron 50.0%
ACCACACCTAACCAAGCGAT+TGG - chr6_1:27056185-27056204 None:intergenic 50.0%
AGAATGGTGATCATCGCTGC+AGG + chr6_1:27056232-27056251 Msa0880450:intron 50.0%
! GGTGGAGAGCAAGGTATTCA+CGG + chr6_1:27057870-27057889 Msa0880450:intron 50.0%
! GTGGAGAGCAAGGTATTCAC+GGG + chr6_1:27057871-27057890 Msa0880450:intron 50.0%
TACTGCACAGGTATGCTTGC+TGG + chr6_1:27058317-27058336 Msa0880450:intron 50.0%
CCCCCAATAACAGCAGAAAC+TGG - chr6_1:27058477-27058496 None:intergenic 50.0%
TTCGGGACAGAACCATCATG+AGG - chr6_1:27058978-27058997 None:intergenic 50.0%
! TATGTTCTGGGTTCTCCAGC+CGG + chr6_1:27059014-27059033 Msa0880450:three_prime_UTR 50.0%
TCAAAGACAGGTTTACCGGC+TGG - chr6_1:27059032-27059051 None:intergenic 50.0%
TCAAAGACAGGTTTACCCGC+TGG - chr6_1:27059120-27059139 None:intergenic 50.0%
GCCAACAACAGTCACCTATC+GGG + chr6_1:27059365-27059384 Msa0880450:three_prime_UTR 50.0%
CGGTGACTGTGAGTGGAATG+AGG - chr6_1:27052787-27052806 None:intergenic 55.0%
GAACTGTCGGTGACTGTGAG+TGG - chr6_1:27052794-27052813 None:intergenic 55.0%
GTCGTGAAACAGGTTGCGGT+TGG + chr6_1:27052984-27053003 Msa0880450:intron 55.0%
CGGTTGGAAATGAACGGCGA+CGG + chr6_1:27053000-27053019 Msa0880450:exon 55.0%
TGACGATAGACCGGTCACTG+AGG + chr6_1:27053879-27053898 Msa0880450:CDS 55.0%
ACCACCCACCCCTAATCAAG+TGG + chr6_1:27055726-27055745 Msa0880450:intron 55.0%
ACCACTTGATTAGGGGTGGG+TGG - chr6_1:27055730-27055749 None:intergenic 55.0%
TGACGAAGAGCCATCGATGG+CGG - chr6_1:27056152-27056171 None:intergenic 55.0%
GCTGCAGGTTAAAGCAACGG+CGG + chr6_1:27056247-27056266 Msa0880450:intron 55.0%
!!! GTGGTTTTGAGAGTGAGCCG+TGG + chr6_1:27056435-27056454 Msa0880450:intron 55.0%
TACCTTGGAGGGCTCTTCAC+AGG + chr6_1:27057659-27057678 Msa0880450:CDS 55.0%
CTTGCTCTCCACCTCTCTCT+TGG - chr6_1:27057863-27057882 None:intergenic 55.0%
CAAGAGAGAGGTGGAGAGCA+AGG + chr6_1:27057861-27057880 Msa0880450:intron 55.0%
AGAGGCTGAAGGACGTAGTG+CGG + chr6_1:27058239-27058258 Msa0880450:CDS 55.0%
!! GCTGTTATTGGGGGCATCCT+TGG + chr6_1:27058483-27058502 Msa0880450:CDS 55.0%
!! TATTGGGGGCATCCTTGGAC+AGG + chr6_1:27058488-27058507 Msa0880450:CDS 55.0%
GGTTCTGTCCCGAAAGAAGC+TGG + chr6_1:27058984-27059003 Msa0880450:three_prime_UTR 55.0%
GATTCTCCAGCGGGTAAACC+TGG + chr6_1:27059199-27059218 Msa0880450:three_prime_UTR 55.0%
GCCCGATAGGTGACTGTTGT+TGG - chr6_1:27059369-27059388 None:intergenic 55.0%
GCGGAGGAGAAGGGAACTGT+CGG - chr6_1:27052807-27052826 None:intergenic 60.0%
AAATTCGTCTCAGGGCGCGG+AGG - chr6_1:27052823-27052842 None:intergenic 60.0%
CGGCGACGGCGAAGAGTTAA+CGG + chr6_1:27053014-27053033 Msa0880450:CDS 60.0%
!! GGGGTGCCGATGCTCAAAGA+AGG + chr6_1:27053076-27053095 Msa0880450:CDS 60.0%
CTCCTGTGAAGAGCCCTCCA+AGG - chr6_1:27057664-27057683 None:intergenic 60.0%
GAGGCTGAAGGACGTAGTGC+GGG + chr6_1:27058240-27058259 Msa0880450:CDS 60.0%
TCTCAGGGCGCGGAGGAGAA+GGG - chr6_1:27052816-27052835 None:intergenic 65.0%
CGGCGAAGAGTTAACGGCGC+AGG + chr6_1:27053020-27053039 Msa0880450:CDS 65.0%
GTCTCAGGGCGCGGAGGAGA+AGG - chr6_1:27052817-27052836 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 27052764 27059531 27052764 ID=Msa0880450;Name=Msa0880450
chr6_1 mRNA 27052764 27059531 27052764 ID=Msa0880450-mRNA-1;Parent=Msa0880450;Name=Msa0880450-mRNA-1;_AED=0.11;_eAED=0.11;_QI=150|1|1|1|0.7|0.72|11|824|325
chr6_1 exon 27052764 27052900 27052764 ID=Msa0880450-mRNA-1:exon:6600;Parent=Msa0880450-mRNA-1
chr6_1 exon 27052996 27053097 27052996 ID=Msa0880450-mRNA-1:exon:6601;Parent=Msa0880450-mRNA-1
chr6_1 exon 27053278 27053329 27053278 ID=Msa0880450-mRNA-1:exon:6602;Parent=Msa0880450-mRNA-1
chr6_1 exon 27053832 27054027 27053832 ID=Msa0880450-mRNA-1:exon:6603;Parent=Msa0880450-mRNA-1
chr6_1 exon 27054168 27054247 27054168 ID=Msa0880450-mRNA-1:exon:6604;Parent=Msa0880450-mRNA-1
chr6_1 exon 27054338 27054454 27054338 ID=Msa0880450-mRNA-1:exon:6605;Parent=Msa0880450-mRNA-1
chr6_1 exon 27056874 27056924 27056874 ID=Msa0880450-mRNA-1:exon:6606;Parent=Msa0880450-mRNA-1
chr6_1 exon 27057646 27057712 27057646 ID=Msa0880450-mRNA-1:exon:6607;Parent=Msa0880450-mRNA-1
chr6_1 exon 27058223 27058326 27058223 ID=Msa0880450-mRNA-1:exon:6608;Parent=Msa0880450-mRNA-1
chr6_1 exon 27058405 27058509 27058405 ID=Msa0880450-mRNA-1:exon:6609;Parent=Msa0880450-mRNA-1
chr6_1 exon 27058591 27059531 27058591 ID=Msa0880450-mRNA-1:exon:6610;Parent=Msa0880450-mRNA-1
chr6_1 five_prime_UTR 27052764 27052900 27052764 ID=Msa0880450-mRNA-1:five_prime_utr;Parent=Msa0880450-mRNA-1
chr6_1 five_prime_UTR 27052996 27053008 27052996 ID=Msa0880450-mRNA-1:five_prime_utr;Parent=Msa0880450-mRNA-1
chr6_1 CDS 27053009 27053097 27053009 ID=Msa0880450-mRNA-1:cds;Parent=Msa0880450-mRNA-1
chr6_1 CDS 27053278 27053329 27053278 ID=Msa0880450-mRNA-1:cds;Parent=Msa0880450-mRNA-1
chr6_1 CDS 27053832 27054027 27053832 ID=Msa0880450-mRNA-1:cds;Parent=Msa0880450-mRNA-1
chr6_1 CDS 27054168 27054247 27054168 ID=Msa0880450-mRNA-1:cds;Parent=Msa0880450-mRNA-1
chr6_1 CDS 27054338 27054454 27054338 ID=Msa0880450-mRNA-1:cds;Parent=Msa0880450-mRNA-1
chr6_1 CDS 27056874 27056924 27056874 ID=Msa0880450-mRNA-1:cds;Parent=Msa0880450-mRNA-1
chr6_1 CDS 27057646 27057712 27057646 ID=Msa0880450-mRNA-1:cds;Parent=Msa0880450-mRNA-1
chr6_1 CDS 27058223 27058326 27058223 ID=Msa0880450-mRNA-1:cds;Parent=Msa0880450-mRNA-1
chr6_1 CDS 27058405 27058509 27058405 ID=Msa0880450-mRNA-1:cds;Parent=Msa0880450-mRNA-1
chr6_1 CDS 27058591 27058707 27058591 ID=Msa0880450-mRNA-1:cds;Parent=Msa0880450-mRNA-1
chr6_1 three_prime_UTR 27058708 27059531 27058708 ID=Msa0880450-mRNA-1:three_prime_utr;Parent=Msa0880450-mRNA-1
Gene Sequence

>Msa0880450

ATGAACGGCGACGGCGAAGAGTTAACGGCGCAGGAAACCGCTTTGTATGACCGTCAGATTAGGGTTTGGGGTGCCGATGCTCAAAGAAGATTAAGCAAAGCTCATGTCTTAGTTTATGGAATGAAAGGAACTATTGCTGAGTTTTGCAAGAATATTGTTCTGGCTGGAGTTGGTAGTCTGACCTTAATTGACGATAGACCGGTCACTGAGGAATTGCTTTCTTCAAATTTTCTTATTCCTCCTGATGAGAATGTGTATAATGGAAAAACCATTGCTCAGCTTTGTTGTGATTCACTTAAAGACTTCAATCCTATGGTTCGTGTCTTTGTGGATAAAGGTGATTTGTCAAGCTTTGATGTAGAATTCTTCGGCAAATTCGATGTTGTTGTTGTCAGTTGTTGCTCACGTTCAGCCAAAAAACTAGCCAATGAAAAATGCCGGAAAGCTTCCAAACGTGTAGCATTTTATACTGTTGACTGTAGAGATTCTTGCGGTGAAGTTTTTGTTGATCTGCAGGACTATAAATATCAAAAGAAAAAAATGGAGGAAACTATTGAATGCCACCTAAAATATCCAAGTTTTGAGGATGCTCTATCAGTACCTTGGAGGGCTCTTCACAGGAGAATGTCAAAGCTGTACTTTGCAATGAGAGTAATAGAGAAGTTTGAAGAGGCTGAAGGACGTAGTGCGGGAGATGTTTCTGATGCAGATCTTTCCAATGTTCTTAAGCTGAAAAAGGAGCTTTGTACTGCACAGTCTCTCAATGAATCTCATGTGCCTGATACTCTTCTGGAAAGATTGGTAGCAGATACAACAGAATTTCCTCCAGTTTCTGCTGTTATTGGGGGCATCCTTGGACAGGAGGTTATCAAAGCAATTTCTGGGAAAGGGGATCCCATAAAAAACTTTTTCTATTTTGATGCTTCTGATGGGAAGGGTATCATAGAAGACATATCTGATTCAAATACTGGAAAGTGA

Protein sequence

>Msa0880450

MNGDGEELTAQETALYDRQIRVWGADAQRRLSKAHVLVYGMKGTIAEFCKNIVLAGVGSLTLIDDRPVTEELLSSNFLIPPDENVYNGKTIAQLCCDSLKDFNPMVRVFVDKGDLSSFDVEFFGKFDVVVVSCCSRSAKKLANEKCRKASKRVAFYTVDCRDSCGEVFVDLQDYKYQKKKMEETIECHLKYPSFEDALSVPWRALHRRMSKLYFAMRVIEKFEEAEGRSAGDVSDADLSNVLKLKKELCTAQSLNESHVPDTLLERLVADTTEFPPVSAVIGGILGQEVIKAISGKGDPIKNFFYFDASDGKGIIEDISDSNTGK*