Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580280 | XP_003607403.1 | 99.487 | 195 | 1 | 0 | 1 | 195 | 1 | 195 | 2.41e-140 | 399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580280 | sp|P61210|ARF1_LOCMI | 63.483 | 178 | 65 | 0 | 1 | 178 | 1 | 178 | 9.58e-84 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580280 | G7JRR7 | 99.487 | 195 | 1 | 0 | 1 | 195 | 1 | 195 | 1.15e-140 | 399 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0580280 | 0.834062 | 3.725049e-56 | -8.615850e-47 |
| Msa0008090 | Msa0580280 | 0.824729 | 6.893597e-54 | -8.615850e-47 |
| Msa0020390 | Msa0580280 | 0.848753 | 5.014351e-60 | -8.615850e-47 |
| Msa0029260 | Msa0580280 | 0.850120 | 2.085657e-60 | -8.615850e-47 |
| Msa0029630 | Msa0580280 | 0.810648 | 1.038214e-50 | -8.615850e-47 |
| Msa0033880 | Msa0580280 | 0.848791 | 4.893661e-60 | -8.615850e-47 |
| Msa0043860 | Msa0580280 | 0.850716 | 1.418810e-60 | -8.615850e-47 |
| Msa0046740 | Msa0580280 | 0.835390 | 1.725291e-56 | -8.615850e-47 |
| Msa0048180 | Msa0580280 | 0.815665 | 8.230599e-52 | -8.615850e-47 |
| Msa0055100 | Msa0580280 | 0.816651 | 4.955241e-52 | -8.615850e-47 |
| Msa0061970 | Msa0580280 | 0.806197 | 9.244965e-50 | -8.615850e-47 |
| Msa0064350 | Msa0580280 | 0.820624 | 6.215567e-53 | -8.615850e-47 |
| Msa0068000 | Msa0580280 | 0.820066 | 8.344775e-53 | -8.615850e-47 |
| Msa0068020 | Msa0580280 | 0.884973 | 1.213411e-71 | -8.615850e-47 |
| Msa0074750 | Msa0580280 | 0.806287 | 8.852583e-50 | -8.615850e-47 |
| Msa0075170 | Msa0580280 | 0.801926 | 7.151364e-49 | -8.615850e-47 |
| Msa0076040 | Msa0580280 | 0.835034 | 2.122625e-56 | -8.615850e-47 |
| Msa0082280 | Msa0580280 | 0.802328 | 5.909907e-49 | -8.615850e-47 |
| Msa0090520 | Msa0580280 | 0.822230 | 2.647470e-53 | -8.615850e-47 |
| Msa0090550 | Msa0580280 | 0.801007 | 1.103097e-48 | -8.615850e-47 |
| Msa0091610 | Msa0580280 | 0.864072 | 1.581747e-64 | -8.615850e-47 |
| Msa0093010 | Msa0580280 | 0.854334 | 1.319337e-61 | -8.615850e-47 |
| Msa0096800 | Msa0580280 | 0.807558 | 4.765706e-50 | -8.615850e-47 |
| Msa0101180 | Msa0580280 | 0.808787 | 2.608973e-50 | -8.615850e-47 |
| Msa0113240 | Msa0580280 | 0.835321 | 1.796232e-56 | -8.615850e-47 |
| Msa0115370 | Msa0580280 | 0.866568 | 2.592415e-65 | -8.615850e-47 |
| Msa0115990 | Msa0580280 | 0.843995 | 9.942790e-59 | -8.615850e-47 |
| Msa0121820 | Msa0580280 | 0.804443 | 2.155129e-49 | -8.615850e-47 |
| Msa0123560 | Msa0580280 | 0.838667 | 2.509204e-57 | -8.615850e-47 |
| Msa0125450 | Msa0580280 | 0.815287 | 9.988795e-52 | -8.615850e-47 |
| Msa0125540 | Msa0580280 | 0.816787 | 4.619183e-52 | -8.615850e-47 |
| Msa0127850 | Msa0580280 | 0.853924 | 1.731623e-61 | -8.615850e-47 |
| Msa0128860 | Msa0580280 | 0.805800 | 1.120890e-49 | -8.615850e-47 |
| Msa0136120 | Msa0580280 | 0.801586 | 8.394872e-49 | -8.615850e-47 |
| Msa0137990 | Msa0580280 | 0.820565 | 6.413968e-53 | -8.615850e-47 |
| Msa0139320 | Msa0580280 | 0.908892 | 1.039390e-81 | -8.615850e-47 |
| Msa0140110 | Msa0580280 | 0.814337 | 1.621770e-51 | -8.615850e-47 |
| Msa0147980 | Msa0580280 | 0.804047 | 2.605031e-49 | -8.615850e-47 |
| Msa0149190 | Msa0580280 | 0.821650 | 3.607805e-53 | -8.615850e-47 |
| Msa0150260 | Msa0580280 | 0.801662 | 8.100571e-49 | -8.615850e-47 |
| Msa0159420 | Msa0580280 | 0.837555 | 4.850353e-57 | -8.615850e-47 |
| Msa0159440 | Msa0580280 | 0.809160 | 2.171087e-50 | -8.615850e-47 |
| Msa0165950 | Msa0580280 | 0.804573 | 2.024743e-49 | -8.615850e-47 |
| Msa0166750 | Msa0580280 | 0.829995 | 3.767931e-55 | -8.615850e-47 |
| Msa0167980 | Msa0580280 | 0.830226 | 3.307920e-55 | -8.615850e-47 |
| Msa0169300 | Msa0580280 | 0.852227 | 5.302292e-61 | -8.615850e-47 |
| Msa0174000 | Msa0580280 | 0.826463 | 2.675511e-54 | -8.615850e-47 |
| Msa0174730 | Msa0580280 | 0.804525 | 2.072072e-49 | -8.615850e-47 |
| Msa0174770 | Msa0580280 | 0.823969 | 1.039968e-53 | -8.615850e-47 |
| Msa0177960 | Msa0580280 | 0.809642 | 1.710690e-50 | -8.615850e-47 |
| Msa0181610 | Msa0580280 | 0.828454 | 8.909519e-55 | -8.615850e-47 |
| Msa0183460 | Msa0580280 | 0.814437 | 1.541677e-51 | -8.615850e-47 |
| Msa0183870 | Msa0580280 | 0.826572 | 2.521064e-54 | -8.615850e-47 |
| Msa0183900 | Msa0580280 | 0.828934 | 6.820824e-55 | -8.615850e-47 |
| Msa0187930 | Msa0580280 | 0.804320 | 2.286278e-49 | -8.615850e-47 |
| Msa0188350 | Msa0580280 | 0.809733 | 1.634895e-50 | -8.615850e-47 |
| Msa0190590 | Msa0580280 | 0.823942 | 1.055648e-53 | -8.615850e-47 |
| Msa0191070 | Msa0580280 | 0.833521 | 5.084079e-56 | -8.615850e-47 |
| Msa0191080 | Msa0580280 | 0.806177 | 9.334675e-50 | -8.615850e-47 |
| Msa0194540 | Msa0580280 | 0.801818 | 7.524405e-49 | -8.615850e-47 |
| Msa0199690 | Msa0580280 | 0.820434 | 6.871928e-53 | -8.615850e-47 |
| Msa0199880 | Msa0580280 | 0.819413 | 1.176717e-52 | -8.615850e-47 |
| Msa0217670 | Msa0580280 | 0.819447 | 1.156061e-52 | -8.615850e-47 |
| Msa0231100 | Msa0580280 | 0.806644 | 7.440990e-50 | -8.615850e-47 |
| Msa0231790 | Msa0580280 | 0.810174 | 1.314106e-50 | -8.615850e-47 |
| Msa0233370 | Msa0580280 | 0.805387 | 1.367848e-49 | -8.615850e-47 |
| Msa0376820 | Msa0580280 | 0.826825 | 2.193617e-54 | -8.615850e-47 |
| Msa0380300 | Msa0580280 | 0.831608 | 1.515769e-55 | -8.615850e-47 |
| Msa0384880 | Msa0580280 | 0.820953 | 5.222739e-53 | -8.615850e-47 |
| Msa0385500 | Msa0580280 | 0.863829 | 1.882714e-64 | -8.615850e-47 |
| Msa0389510 | Msa0580280 | 0.955427 | 3.113695e-113 | -8.615850e-47 |
| Msa0403730 | Msa0580280 | 0.808180 | 3.515824e-50 | -8.615850e-47 |
| Msa0408240 | Msa0580280 | -0.810565 | 1.082060e-50 | -8.615850e-47 |
| Msa0415430 | Msa0580280 | 0.814374 | 1.591903e-51 | -8.615850e-47 |
| Msa0423750 | Msa0580280 | 0.825878 | 3.687398e-54 | -8.615850e-47 |
| Msa0427860 | Msa0580280 | -0.831281 | 1.824899e-55 | -8.615850e-47 |
| Msa0429030 | Msa0580280 | 0.809564 | 1.778061e-50 | -8.615850e-47 |
| Msa0443390 | Msa0580280 | 0.822011 | 2.975697e-53 | -8.615850e-47 |
| Msa0456430 | Msa0580280 | 0.852766 | 3.722327e-61 | -8.615850e-47 |
| Msa0470530 | Msa0580280 | 0.821286 | 4.378137e-53 | -8.615850e-47 |
| Msa0472130 | Msa0580280 | 0.819637 | 1.046141e-52 | -8.615850e-47 |
| Msa0474090 | Msa0580280 | -0.832053 | 1.177380e-55 | -8.615850e-47 |
| Msa0481480 | Msa0580280 | 0.810814 | 9.557209e-51 | -8.615850e-47 |
| Msa0481810 | Msa0580280 | 0.808565 | 2.909582e-50 | -8.615850e-47 |
| Msa0244980 | Msa0580280 | 0.835759 | 1.391548e-56 | -8.615850e-47 |
| Msa0245060 | Msa0580280 | 0.825080 | 5.697894e-54 | -8.615850e-47 |
| Msa0257490 | Msa0580280 | 0.846359 | 2.282636e-59 | -8.615850e-47 |
| Msa0269470 | Msa0580280 | 0.860083 | 2.644265e-63 | -8.615850e-47 |
| Msa0275360 | Msa0580280 | 0.809226 | 2.101283e-50 | -8.615850e-47 |
| Msa0280430 | Msa0580280 | 0.827298 | 1.689920e-54 | -8.615850e-47 |
| Msa0281530 | Msa0580280 | 0.813161 | 2.944710e-51 | -8.615850e-47 |
| Msa0283420 | Msa0580280 | 0.821034 | 5.004274e-53 | -8.615850e-47 |
| Msa0296250 | Msa0580280 | 0.800618 | 1.324530e-48 | -8.615850e-47 |
| Msa0296790 | Msa0580280 | 0.837540 | 4.893825e-57 | -8.615850e-47 |
| Msa0296920 | Msa0580280 | 0.820429 | 6.891181e-53 | -8.615850e-47 |
| Msa0304590 | Msa0580280 | 0.850599 | 1.529670e-60 | -8.615850e-47 |
| Msa0304660 | Msa0580280 | 0.852962 | 3.270837e-61 | -8.615850e-47 |
| Msa0317910 | Msa0580280 | 0.805290 | 1.433534e-49 | -8.615850e-47 |
| Msa0320590 | Msa0580280 | 0.828370 | 9.336130e-55 | -8.615850e-47 |
| Msa0321690 | Msa0580280 | 0.811911 | 5.523108e-51 | -8.615850e-47 |
| Msa0331700 | Msa0580280 | 0.851967 | 6.283453e-61 | -8.615850e-47 |
| Msa0348830 | Msa0580280 | 0.821875 | 3.199563e-53 | -8.615850e-47 |
| Msa0358770 | Msa0580280 | 0.821971 | 3.040363e-53 | -8.615850e-47 |
| Msa0484290 | Msa0580280 | 0.801740 | 7.807168e-49 | -8.615850e-47 |
| Msa0484740 | Msa0580280 | 0.866844 | 2.118095e-65 | -8.615850e-47 |
| Msa0485710 | Msa0580280 | 0.808210 | 3.464073e-50 | -8.615850e-47 |
| Msa0485850 | Msa0580280 | 0.815655 | 8.273249e-52 | -8.615850e-47 |
| Msa0506400 | Msa0580280 | 0.800055 | 1.724568e-48 | -8.615850e-47 |
| Msa0511770 | Msa0580280 | 0.812924 | 3.319068e-51 | -8.615850e-47 |
| Msa0521050 | Msa0580280 | 0.838799 | 2.320659e-57 | -8.615850e-47 |
| Msa0524500 | Msa0580280 | 0.821179 | 4.634175e-53 | -8.615850e-47 |
| Msa0527150 | Msa0580280 | 0.803251 | 3.811859e-49 | -8.615850e-47 |
| Msa0531250 | Msa0580280 | 0.808894 | 2.474994e-50 | -8.615850e-47 |
| Msa0531650 | Msa0580280 | 0.816309 | 5.908602e-52 | -8.615850e-47 |
| Msa0534750 | Msa0580280 | 0.800870 | 1.176682e-48 | -8.615850e-47 |
| Msa0544540 | Msa0580280 | 0.867297 | 1.517945e-65 | -8.615850e-47 |
| Msa0547160 | Msa0580280 | 0.817691 | 2.891693e-52 | -8.615850e-47 |
| Msa0552810 | Msa0580280 | 0.820053 | 8.401995e-53 | -8.615850e-47 |
| Msa0559790 | Msa0580280 | 0.842500 | 2.489539e-58 | -8.615850e-47 |
| Msa0580230 | Msa0580280 | 0.972880 | 1.709769e-135 | -8.615850e-47 |
| Msa0580280 | Msa0581070 | 0.843711 | 1.184401e-58 | -8.615850e-47 |
| Msa0580280 | Msa0581110 | 0.819007 | 1.455699e-52 | -8.615850e-47 |
| Msa0580280 | Msa0588260 | 0.827776 | 1.298129e-54 | -8.615850e-47 |
| Msa0580280 | Msa0593700 | 0.830647 | 2.610293e-55 | -8.615850e-47 |
| Msa0580280 | Msa0603570 | 0.810133 | 1.341125e-50 | -8.615850e-47 |
| Msa0580280 | Msa0605510 | 0.812469 | 4.173103e-51 | -8.615850e-47 |
| Msa0580280 | Msa0607690 | 0.827739 | 1.324631e-54 | -8.615850e-47 |
| Msa0580280 | Msa0610390 | 0.827941 | 1.184735e-54 | -8.615850e-47 |
| Msa0580280 | Msa0610550 | 0.827255 | 1.730315e-54 | -8.615850e-47 |
| Msa0580280 | Msa0613920 | 0.845037 | 5.211601e-59 | -8.615850e-47 |
| Msa0580280 | Msa0614510 | 0.801321 | 9.516206e-49 | -8.615850e-47 |
| Msa0580280 | Msa0615580 | 0.817082 | 3.966391e-52 | -8.615850e-47 |
| Msa0580280 | Msa0620200 | 0.815179 | 1.055548e-51 | -8.615850e-47 |
| Msa0580280 | Msa0628420 | 0.822064 | 2.892882e-53 | -8.615850e-47 |
| Msa0580280 | Msa0633570 | 0.828671 | 7.897169e-55 | -8.615850e-47 |
| Msa0580280 | Msa0646470 | 0.813511 | 2.466770e-51 | -8.615850e-47 |
| Msa0580280 | Msa0647930 | 0.807262 | 5.509347e-50 | -8.615850e-47 |
| Msa0580280 | Msa0647950 | 0.807605 | 4.657696e-50 | -8.615850e-47 |
| Msa0580280 | Msa0648010 | 0.822540 | 2.242980e-53 | -8.615850e-47 |
| Msa0580280 | Msa0650920 | 0.821289 | 4.369205e-53 | -8.615850e-47 |
| Msa0580280 | Msa0651050 | 0.810691 | 1.016316e-50 | -8.615850e-47 |
| Msa0580280 | Msa0661300 | 0.802502 | 5.443148e-49 | -8.615850e-47 |
| Msa0580280 | Msa0662630 | 0.862771 | 4.002760e-64 | -8.615850e-47 |
| Msa0580280 | Msa0666230 | 0.826487 | 2.640604e-54 | -8.615850e-47 |
| Msa0580280 | Msa0669760 | 0.806290 | 8.839088e-50 | -8.615850e-47 |
| Msa0580280 | Msa0672100 | 0.855446 | 6.275647e-62 | -8.615850e-47 |
| Msa0580280 | Msa0687630 | 0.817861 | 2.647158e-52 | -8.615850e-47 |
| Msa0580280 | Msa0689500 | 0.823969 | 1.039968e-53 | -8.615850e-47 |
| Msa0580280 | Msa0690770 | 0.933516 | 1.666660e-95 | -8.615850e-47 |
| Msa0580280 | Msa0692840 | 0.800081 | 1.703352e-48 | -8.615850e-47 |
| Msa0580280 | Msa0692940 | 0.840176 | 1.017867e-57 | -8.615850e-47 |
| Msa0580280 | Msa0693210 | 0.865790 | 4.574045e-65 | -8.615850e-47 |
| Msa0580280 | Msa0697080 | 0.865260 | 6.719858e-65 | -8.615850e-47 |
| Msa0580280 | Msa0697720 | 0.808225 | 3.438481e-50 | -8.615850e-47 |
| Msa0580280 | Msa0699190 | 0.821374 | 4.177993e-53 | -8.615850e-47 |
| Msa0580280 | Msa0752700 | 0.819428 | 1.167584e-52 | -8.615850e-47 |
| Msa0580280 | Msa0794970 | 0.810408 | 1.170174e-50 | -8.615850e-47 |
| Msa0580280 | Msa0800370 | 0.802003 | 6.893358e-49 | -8.615850e-47 |
| Msa0580280 | Msa0808800 | 0.831874 | 1.303438e-55 | -8.615850e-47 |
| Msa0580280 | Msa0822180 | 0.812854 | 3.438875e-51 | -8.615850e-47 |
| Msa0580280 | Msa0822310 | -0.807681 | 4.488726e-50 | -8.615850e-47 |
| Msa0580280 | Msa0827280 | 0.824413 | 8.182430e-54 | -8.615850e-47 |
| Msa0580280 | Msa0831100 | 0.815744 | 7.902231e-52 | -8.615850e-47 |
| Msa0580280 | Msa0833190 | -0.807450 | 5.023975e-50 | -8.615850e-47 |
| Msa0580280 | Msa0838370 | 0.821768 | 3.387388e-53 | -8.615850e-47 |
| Msa0580280 | Msa0858440 | 0.834235 | 3.369583e-56 | -8.615850e-47 |
| Msa0580280 | Msa0880450 | 0.804730 | 1.877445e-49 | -8.615850e-47 |
| Msa0580280 | Msa0880470 | 0.834749 | 2.504145e-56 | -8.615850e-47 |
| Msa0580280 | Msa0895390 | 0.800153 | 1.647050e-48 | -8.615850e-47 |
| Msa0580280 | Msa0936480 | 0.806884 | 6.621468e-50 | -8.615850e-47 |
| Msa0580280 | Msa0943170 | 0.804098 | 2.542929e-49 | -8.615850e-47 |
| Msa0580280 | Msa0960830 | 0.827952 | 1.177376e-54 | -8.615850e-47 |
| Msa0580280 | Msa0963020 | 0.803905 | 2.789182e-49 | -8.615850e-47 |
| Msa0580280 | Msa0980540 | 0.805944 | 1.045140e-49 | -8.615850e-47 |
| Msa0580280 | Msa0994290 | 0.853608 | 2.135592e-61 | -8.615850e-47 |
| Msa0580280 | Msa1019240 | 0.804644 | 1.956340e-49 | -8.615850e-47 |
| Msa0580280 | Msa1019260 | 0.809086 | 2.250743e-50 | -8.615850e-47 |
| Msa0580280 | Msa1025940 | 0.815767 | 7.810074e-52 | -8.615850e-47 |
| Msa0580280 | Msa1037510 | 0.805937 | 1.048971e-49 | -8.615850e-47 |
| Msa0580280 | Msa1039900 | 0.852780 | 3.688566e-61 | -8.615850e-47 |
| Msa0580280 | Msa1072710 | 0.814513 | 1.482519e-51 | -8.615850e-47 |
| Msa0580280 | Msa1078270 | 0.801335 | 9.454254e-49 | -8.615850e-47 |
| Msa0580280 | Msa1089320 | 0.827934 | 1.188933e-54 | -8.615850e-47 |
| Msa0580280 | Msa1106210 | 0.848174 | 7.251950e-60 | -8.615850e-47 |
| Msa0580280 | Msa1121680 | 0.812580 | 3.946668e-51 | -8.615850e-47 |
| Msa0580280 | Msa1123350 | 0.820747 | 5.826514e-53 | -8.615850e-47 |
| Msa0580280 | Msa1123500 | 0.820366 | 7.124228e-53 | -8.615850e-47 |
| Msa0580280 | Msa1125500 | 0.804628 | 1.971552e-49 | -8.615850e-47 |
| Msa0580280 | Msa1126510 | 0.808247 | 3.401450e-50 | -8.615850e-47 |
| Msa0580280 | Msa1126770 | 0.823191 | 1.582102e-53 | -8.615850e-47 |
| Msa0580280 | Msa1126830 | 0.819686 | 1.019472e-52 | -8.615850e-47 |
| Msa0580280 | Msa1130980 | 0.810371 | 1.191831e-50 | -8.615850e-47 |
| Msa0580280 | Msa1149440 | 0.813861 | 2.065630e-51 | -8.615850e-47 |
| Msa0580280 | Msa1165780 | 0.829934 | 3.897988e-55 | -8.615850e-47 |
| Msa0580280 | Msa1166870 | 0.814407 | 1.564770e-51 | -8.615850e-47 |
| Msa0580280 | Msa1169770 | 0.801828 | 7.488511e-49 | -8.615850e-47 |
| Msa0580280 | Msa1175350 | 0.800352 | 1.500416e-48 | -8.615850e-47 |
| Msa0580280 | Msa1184370 | 0.831411 | 1.694759e-55 | -8.615850e-47 |
| Msa0580280 | Msa1202580 | 0.816087 | 6.626211e-52 | -8.615850e-47 |
| Msa0580280 | Msa1206650 | 0.813264 | 2.794941e-51 | -8.615850e-47 |
| Msa0580280 | Msa1208020 | 0.809077 | 2.260968e-50 | -8.615850e-47 |
| Msa0580280 | Msa1227690 | 0.848249 | 6.911603e-60 | -8.615850e-47 |
| Msa0580280 | Msa1233850 | 0.815565 | 8.661471e-52 | -8.615850e-47 |
| Msa0580280 | Msa1234980 | 0.807102 | 5.956303e-50 | -8.615850e-47 |
| Msa0580280 | Msa1235460 | 0.805482 | 1.306877e-49 | -8.615850e-47 |
| Msa0580280 | Msa1251160 | 0.817677 | 2.912530e-52 | -8.615850e-47 |
| Msa0580280 | Msa1256470 | 0.839461 | 1.563074e-57 | -8.615850e-47 |
| Msa0580280 | Msa1256770 | 0.811954 | 5.405428e-51 | -8.615850e-47 |
| Msa0580280 | Msa1264210 | 0.804561 | 2.036044e-49 | -8.615850e-47 |
| Msa0580280 | Msa1295110 | 0.803466 | 3.439791e-49 | -8.615850e-47 |
| Msa0580280 | Msa1296830 | 0.842768 | 2.113274e-58 | -8.615850e-47 |
| Msa0580280 | Msa1298050 | 0.800171 | 1.633490e-48 | -8.615850e-47 |
| Msa0580280 | Msa1307950 | 0.800040 | 1.736812e-48 | -8.615850e-47 |
| Msa0580280 | Msa1310690 | 0.804741 | 1.867241e-49 | -8.615850e-47 |
| Msa0580280 | Msa1325800 | 0.815823 | 7.586815e-52 | -8.615850e-47 |
| Msa0580280 | Msa1331250 | 0.804962 | 1.679101e-49 | -8.615850e-47 |
| Msa0580280 | Msa1336560 | 0.810158 | 1.324465e-50 | -8.615850e-47 |
| Msa0580280 | Msa1345450 | 0.802213 | 6.242114e-49 | -8.615850e-47 |
| Msa0580280 | Msa1349570 | 0.803926 | 2.760255e-49 | -8.615850e-47 |
| Msa0580280 | Msa1351540 | 0.813232 | 2.840323e-51 | -8.615850e-47 |
| Msa0580280 | Msa1352890 | 0.807122 | 5.898079e-50 | -8.615850e-47 |
| Msa0580280 | Msa1362420 | 0.866906 | 2.024337e-65 | -8.615850e-47 |
| Msa0580280 | Msa1364210 | 0.828619 | 8.127412e-55 | -8.615850e-47 |
| Msa0580280 | Msa1369190 | 0.840264 | 9.653162e-58 | -8.615850e-47 |
| Msa0580280 | Msa1370860 | 0.815263 | 1.011188e-51 | -8.615850e-47 |
| Msa0580280 | Msa1376650 | 0.843048 | 1.780613e-58 | -8.615850e-47 |
| Msa0580280 | Msa1379760 | 0.803370 | 3.601267e-49 | -8.615850e-47 |
| Msa0580280 | Msa1404190 | 0.800692 | 1.279103e-48 | -8.615850e-47 |
| Msa0580280 | Msa1411950 | 0.822943 | 1.807246e-53 | -8.615850e-47 |
| Msa0580280 | Msa1413260 | 0.848854 | 4.700675e-60 | -8.615850e-47 |
| Msa0580280 | Msa1418340 | 0.813359 | 2.664560e-51 | -8.615850e-47 |
| Msa0580280 | Msa1425670 | 0.844431 | 7.594619e-59 | -8.615850e-47 |
| Msa0580280 | Msa1442850 | 0.806446 | 8.195328e-50 | -8.615850e-47 |
| Msa0580280 | Msa1450280 | 0.844445 | 7.526159e-59 | -8.615850e-47 |
| Msa0580280 | Msa1456050 | 0.849757 | 2.634569e-60 | -8.615850e-47 |
| Msa0580280 | Msa1458290 | 0.810846 | 9.408433e-51 | -8.615850e-47 |
| Msa0580280 | Msa1462860 | 0.844788 | 6.084156e-59 | -8.615850e-47 |
| Msa0580280 | Msa1465080 | 0.828631 | 8.076310e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580280 | MtrunA17_Chr4g0039591 | 99.487 | 195 | 1 | 0 | 1 | 195 | 1 | 195 | 2.22e-144 | 399 |
| Msa0580280 | MtrunA17_Chr5g0395631 | 88.718 | 195 | 17 | 1 | 1 | 195 | 1 | 190 | 2.24e-128 | 358 |
| Msa0580280 | MtrunA17_Chr5g0395641 | 77.660 | 188 | 40 | 1 | 1 | 186 | 1 | 188 | 1.07e-106 | 304 |
| Msa0580280 | MtrunA17_Chr7g0270301 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 1.23e-81 | 240 |
| Msa0580280 | MtrunA17_Chr1g0194261 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 1.58e-81 | 239 |
| Msa0580280 | MtrunA17_Chr6g0450081 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.27e-81 | 239 |
| Msa0580280 | MtrunA17_Chr5g0413451 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.89e-81 | 239 |
| Msa0580280 | MtrunA17_Chr5g0413441 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.89e-81 | 239 |
| Msa0580280 | MtrunA17_Chr5g0401761 | 58.757 | 177 | 73 | 0 | 1 | 177 | 1 | 177 | 5.21e-78 | 231 |
| Msa0580280 | MtrunA17_Chr4g0072861 | 56.742 | 178 | 77 | 0 | 1 | 178 | 1 | 178 | 2.77e-71 | 214 |
| Msa0580280 | MtrunA17_Chr1g0188111 | 49.425 | 174 | 88 | 0 | 1 | 174 | 1 | 174 | 4.68e-59 | 183 |
| Msa0580280 | MtrunA17_Chr8g0373271 | 44.304 | 158 | 85 | 3 | 18 | 173 | 17 | 173 | 9.53e-44 | 144 |
| Msa0580280 | MtrunA17_Chr5g0395651 | 78.082 | 73 | 16 | 0 | 1 | 73 | 1 | 73 | 9.14e-36 | 120 |
| Msa0580280 | MtrunA17_Chr2g0287721 | 31.579 | 190 | 119 | 2 | 1 | 181 | 1 | 188 | 1.51e-29 | 108 |
| Msa0580280 | MtrunA17_Chr5g0395671 | 84.906 | 53 | 8 | 0 | 131 | 183 | 43 | 95 | 4.60e-28 | 101 |
| Msa0580280 | MtrunA17_Chr5g0434561 | 34.965 | 143 | 92 | 1 | 11 | 152 | 13 | 155 | 2.53e-27 | 102 |
| Msa0580280 | MtrunA17_Chr5g0401071 | 31.788 | 151 | 102 | 1 | 3 | 152 | 5 | 155 | 3.59e-26 | 99.0 |
| Msa0580280 | MtrunA17_Chr2g0294701 | 29.843 | 191 | 114 | 3 | 8 | 178 | 3 | 193 | 1.34e-24 | 95.1 |
| Msa0580280 | MtrunA17_Chr4g0068171 | 30.366 | 191 | 113 | 3 | 8 | 178 | 3 | 193 | 7.70e-24 | 93.2 |
| Msa0580280 | MtrunA17_Chr7g0271761 | 29.319 | 191 | 115 | 3 | 8 | 178 | 3 | 193 | 5.16e-23 | 91.3 |
| Msa0580280 | MtrunA17_Chr4g0012371 | 26.752 | 157 | 114 | 1 | 18 | 173 | 1 | 157 | 1.46e-20 | 84.0 |
| Msa0580280 | MtrunA17_Chr5g0395661 | 69.767 | 43 | 13 | 0 | 88 | 130 | 1 | 43 | 3.04e-15 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580280 | AT3G03120.1 | 91.534 | 189 | 16 | 0 | 1 | 189 | 1 | 189 | 3.24e-130 | 363 |
| Msa0580280 | AT5G17060.2 | 90.476 | 189 | 18 | 0 | 1 | 189 | 1 | 189 | 3.86e-130 | 363 |
| Msa0580280 | AT5G17060.1 | 90.476 | 189 | 18 | 0 | 1 | 189 | 1 | 189 | 3.86e-130 | 363 |
| Msa0580280 | AT3G03120.2 | 93.846 | 130 | 8 | 0 | 1 | 130 | 1 | 130 | 1.72e-87 | 253 |
| Msa0580280 | AT1G10630.1 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 1.66e-81 | 240 |
| Msa0580280 | AT1G10630.2 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 1.66e-81 | 240 |
| Msa0580280 | AT1G23490.1 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.44e-81 | 239 |
| Msa0580280 | AT1G70490.2 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.44e-81 | 239 |
| Msa0580280 | AT1G70490.7 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.44e-81 | 239 |
| Msa0580280 | AT1G70490.4 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.44e-81 | 239 |
| Msa0580280 | AT1G70490.3 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.44e-81 | 239 |
| Msa0580280 | AT1G70490.1 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.44e-81 | 239 |
| Msa0580280 | AT1G70490.6 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.44e-81 | 239 |
| Msa0580280 | AT1G70490.5 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.44e-81 | 239 |
| Msa0580280 | AT3G62290.3 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 4.55e-81 | 239 |
| Msa0580280 | AT3G62290.1 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 4.55e-81 | 239 |
| Msa0580280 | AT3G62290.2 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 4.55e-81 | 239 |
| Msa0580280 | AT2G47170.2 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 5.25e-81 | 239 |
| Msa0580280 | AT2G47170.1 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 5.25e-81 | 239 |
| Msa0580280 | AT2G47170.3 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 5.25e-81 | 239 |
| Msa0580280 | AT5G14670.2 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 6.60e-81 | 238 |
| Msa0580280 | AT5G14670.3 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 6.60e-81 | 238 |
| Msa0580280 | AT5G14670.1 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 8.81e-81 | 238 |
| Msa0580280 | AT2G24765.1 | 57.865 | 178 | 75 | 0 | 1 | 178 | 1 | 178 | 2.45e-73 | 219 |
| Msa0580280 | AT2G15310.1 | 53.158 | 190 | 87 | 1 | 1 | 188 | 1 | 190 | 2.96e-71 | 215 |
| Msa0580280 | AT3G22950.1 | 50.575 | 174 | 86 | 0 | 1 | 174 | 1 | 174 | 1.94e-61 | 189 |
| Msa0580280 | AT3G22950.2 | 50.575 | 174 | 86 | 0 | 1 | 174 | 1 | 174 | 1.94e-61 | 189 |
| Msa0580280 | AT2G24765.2 | 58.594 | 128 | 53 | 0 | 1 | 128 | 1 | 128 | 2.90e-51 | 162 |
| Msa0580280 | AT1G02430.1 | 43.684 | 190 | 97 | 4 | 1 | 180 | 1 | 190 | 1.31e-47 | 154 |
| Msa0580280 | AT1G02440.1 | 40.000 | 190 | 104 | 4 | 1 | 180 | 1 | 190 | 6.47e-45 | 147 |
| Msa0580280 | AT2G18390.1 | 45.570 | 158 | 83 | 3 | 18 | 173 | 17 | 173 | 2.70e-44 | 145 |
| Msa0580280 | AT1G02430.2 | 41.875 | 160 | 87 | 3 | 1 | 154 | 1 | 160 | 1.30e-35 | 123 |
| Msa0580280 | AT5G52210.1 | 33.702 | 181 | 113 | 2 | 8 | 181 | 8 | 188 | 6.41e-31 | 112 |
| Msa0580280 | AT5G52210.2 | 33.702 | 181 | 113 | 2 | 8 | 181 | 8 | 188 | 6.41e-31 | 112 |
| Msa0580280 | AT3G49870.1 | 30.814 | 172 | 118 | 1 | 3 | 173 | 5 | 176 | 2.20e-26 | 100 |
| Msa0580280 | AT5G37680.1 | 32.867 | 143 | 95 | 1 | 11 | 152 | 13 | 155 | 2.56e-26 | 99.8 |
| Msa0580280 | AT3G49860.1 | 32.117 | 137 | 92 | 1 | 17 | 152 | 11 | 147 | 2.82e-25 | 97.1 |
| Msa0580280 | AT5G67560.1 | 30.488 | 164 | 113 | 1 | 11 | 173 | 13 | 176 | 1.17e-24 | 95.5 |
| Msa0580280 | AT3G49870.2 | 30.573 | 157 | 108 | 1 | 18 | 173 | 1 | 157 | 9.11e-24 | 92.8 |
| Msa0580280 | AT3G62560.1 | 30.000 | 190 | 113 | 4 | 8 | 177 | 3 | 192 | 1.22e-22 | 90.5 |
| Msa0580280 | AT1G56330.1 | 28.421 | 190 | 116 | 2 | 8 | 177 | 3 | 192 | 1.36e-22 | 90.5 |
| Msa0580280 | AT4G02080.1 | 28.272 | 191 | 117 | 3 | 8 | 178 | 3 | 193 | 3.08e-22 | 89.4 |
| Msa0580280 | AT1G09180.1 | 28.796 | 191 | 116 | 3 | 8 | 178 | 3 | 193 | 7.82e-22 | 88.6 |
| Msa0580280 | AT5G37680.2 | 30.469 | 128 | 89 | 0 | 46 | 173 | 2 | 129 | 1.03e-21 | 86.7 |
| Msa0580280 | AT1G02440.2 | 31.613 | 155 | 70 | 4 | 1 | 154 | 1 | 120 | 1.35e-20 | 83.2 |
Find 95 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACAGTTACTCTGCCTTTC+AGG | 0.123010 | 4_1:-85325370 | Msa0580280:three_prime_UTR |
| GAAAGCAAAGCAGGAATTTC+AGG | 0.253795 | 4_1:-85327284 | Msa0580280:intron |
| GATTACCAATCACGACATTT+TGG | 0.262840 | 4_1:+85325428 | None:intergenic |
| CCAACATGTTATTATGATTC+AGG | 0.267799 | 4_1:-85325070 | Msa0580280:three_prime_UTR |
| AATATAACTGTCACTTCTAT+TGG | 0.301421 | 4_1:-85325012 | Msa0580280:three_prime_UTR |
| GATTGGTAATCAAATTCTTT+TGG | 0.330564 | 4_1:-85325416 | Msa0580280:three_prime_UTR |
| TGATGGCCTTTATGAGGGTT+TGG | 0.331261 | 4_1:-85325670 | Msa0580280:CDS |
| TTGATCTAAAGAATAGAAAA+TGG | 0.336411 | 4_1:-85325722 | Msa0580280:CDS |
| TGATTTGATTTGATTTGATT+TGG | 0.337065 | 4_1:+85328912 | None:intergenic |
| ACAAGGCACCTGTGCACTTA+AGG | 0.339217 | 4_1:-85325694 | Msa0580280:CDS |
| AAACTCTTCGATTCCTTCTT+CGG | 0.364291 | 4_1:-85328782 | Msa0580280:CDS |
| TTATCTACTGTTCCTACAAT+TGG | 0.369753 | 4_1:-85328072 | Msa0580280:intron |
| GTTATATTATTGTGGTCAAA+AGG | 0.373193 | 4_1:+85325027 | None:intergenic |
| ATGACACTGTTGAGCATAAA+CGG | 0.386547 | 4_1:+85327154 | None:intergenic |
| GTCTGGACCGTGAGAGAATT+GGG | 0.392903 | 4_1:-85327306 | Msa0580280:CDS |
| TAAGGGTGATGGCCTTTATG+AGG | 0.405630 | 4_1:-85325676 | Msa0580280:CDS |
| AGGGAAGTGTGTGACGGATT+AGG | 0.411446 | 4_1:-85325750 | Msa0580280:CDS |
| AGCATCAGAAGAAACGCAAC+AGG | 0.423816 | 4_1:-85328890 | Msa0580280:five_prime_UTR |
| GTGGTTTAGGTTGTCATGCT+TGG | 0.425719 | 4_1:-85328150 | Msa0580280:intron |
| AAATAAAACCCACCAATTGT+AGG | 0.427108 | 4_1:+85328060 | None:intergenic |
| AGTCTGGACCGTGAGAGAAT+TGG | 0.428076 | 4_1:-85327307 | Msa0580280:CDS |
| GATATATGTTGTTGATAGTC+TGG | 0.429765 | 4_1:-85327323 | Msa0580280:CDS |
| CAAGGCACCTGTGCACTTAA+GGG | 0.443318 | 4_1:-85325693 | Msa0580280:CDS |
| ACCAGTCCAAACCCTCATAA+AGG | 0.443770 | 4_1:+85325664 | None:intergenic |
| GCTGCTGGATACTCTTCATT+AGG | 0.445230 | 4_1:-85325615 | Msa0580280:CDS |
| AAAGTGTCCTCAATTTCTCT+TGG | 0.449055 | 4_1:+85327551 | None:intergenic |
| ACATACCAGGTCTTGTTTGT+TGG | 0.462219 | 4_1:+85327120 | None:intergenic |
| GGATAGAAGGTCTTGGATAC+CGG | 0.464749 | 4_1:-85325242 | Msa0580280:three_prime_UTR |
| TATGCTCAACAGTGTCATCT+TGG | 0.465762 | 4_1:-85327149 | Msa0580280:CDS |
| ATGCTTGGTCTTGATGCTGC+TGG | 0.478012 | 4_1:-85328135 | Msa0580280:CDS |
| AACATTCACAAAGTGTAAGA+TGG | 0.480467 | 4_1:+85325186 | None:intergenic |
| TTGCTTTCCCAATTCTCTCA+CGG | 0.480979 | 4_1:+85327299 | None:intergenic |
| TACAGTTACTCTGCCTTTCA+GGG | 0.485049 | 4_1:-85325369 | Msa0580280:three_prime_UTR |
| CACTTCCAAAATGTCGTGAT+TGG | 0.486659 | 4_1:-85325433 | Msa0580280:three_prime_UTR |
| TTTGCTTTGATCTGATCGCA+TGG | 0.488081 | 4_1:-85328819 | Msa0580280:exon |
| CACGTTAAGTGCACGGGTAC+CGG | 0.490269 | 4_1:-85325263 | Msa0580280:three_prime_UTR |
| AAGAGAAATTGAGGACACTT+TGG | 0.498427 | 4_1:-85327549 | Msa0580280:CDS |
| AAGAAACGCAACAGGGAAGA+AGG | 0.506824 | 4_1:-85328882 | Msa0580280:five_prime_UTR |
| CATCTCGGTATTGCCGAAGA+AGG | 0.507052 | 4_1:+85328769 | None:intergenic |
| TTCACGGTTTGGGATGTTGG+AGG | 0.507103 | 4_1:-85327574 | Msa0580280:CDS |
| GAGAATTGGGAAAGCAAAGC+AGG | 0.509211 | 4_1:-85327293 | Msa0580280:CDS |
| ATTAACAAAGTGGTGAGAAT+CGG | 0.512015 | 4_1:-85328948 | Msa0580280:five_prime_UTR |
| TGCGATCAGATCAAAGCAAA+GGG | 0.512024 | 4_1:+85328822 | None:intergenic |
| GCCTTTATGAGGGTTTGGAC+TGG | 0.513026 | 4_1:-85325665 | Msa0580280:CDS |
| GTGCACGGGTACCGGATAGA+AGG | 0.517598 | 4_1:-85325255 | Msa0580280:three_prime_UTR |
| TTGCTTTGATCTGATCGCAT+GGG | 0.518898 | 4_1:-85328818 | Msa0580280:exon |
| CTGAAGGAGATGAAGGCTGC+TGG | 0.519424 | 4_1:-85325630 | Msa0580280:CDS |
| CTCAACACTGAAGGAGATGA+AGG | 0.520559 | 4_1:-85325637 | Msa0580280:CDS |
| TTATATTATTGTGGTCAAAA+GGG | 0.520902 | 4_1:+85325028 | None:intergenic |
| GTGTAAGATGGAGAAAATCA+AGG | 0.522947 | 4_1:+85325198 | None:intergenic |
| AGAAATTGAGGACACTTTGG+AGG | 0.527256 | 4_1:-85327546 | Msa0580280:CDS |
| TGACACTGTTGAGCATAAAC+GGG | 0.527829 | 4_1:+85327155 | None:intergenic |
| ACCTGTGCACTTAAGGGTGA+TGG | 0.530294 | 4_1:-85325687 | Msa0580280:CDS |
| GGGAGAATGAACAACTGATC+CGG | 0.532710 | 4_1:+85325219 | None:intergenic |
| ATTAATTAACATTAACAAAG+TGG | 0.534411 | 4_1:-85328958 | None:intergenic |
| ATCGTGTCACAATATTCTTT+AGG | 0.536832 | 4_1:-85325098 | Msa0580280:three_prime_UTR |
| TTGGAGGCCAAGAGAAATTG+AGG | 0.540924 | 4_1:-85327558 | Msa0580280:CDS |
| AAGGGTGATGGCCTTTATGA+GGG | 0.543901 | 4_1:-85325675 | Msa0580280:CDS |
| CGGTACCCGTGCACTTAACG+TGG | 0.544589 | 4_1:+85325264 | None:intergenic |
| CTTCATCTCCTTCAGTGTTG+AGG | 0.544907 | 4_1:+85325638 | None:intergenic |
| GCCATCACCCTTAAGTGCAC+AGG | 0.550998 | 4_1:+85325686 | None:intergenic |
| GAGAGGAGCGATGACGGCAA+GGG | 0.553248 | 4_1:-85325769 | Msa0580280:CDS |
| CTTCGGCAATACCGAGATGC+GGG | 0.555246 | 4_1:-85328765 | Msa0580280:intron |
| ATCAGATCAAAGCAAAGGGA+AGG | 0.555478 | 4_1:+85328826 | None:intergenic |
| GGGTACCGGATAGAAGGTCT+TGG | 0.556999 | 4_1:-85325249 | Msa0580280:three_prime_UTR |
| ACATGTTATTATGATTCAGG+TGG | 0.561109 | 4_1:-85325067 | Msa0580280:three_prime_UTR |
| AGAGAGGAGCGATGACGGCA+AGG | 0.563849 | 4_1:-85325770 | Msa0580280:CDS |
| AAGTGACAGTTATATTATTG+TGG | 0.567461 | 4_1:+85325019 | None:intergenic |
| GGTATCCAAGACCTTCTATC+CGG | 0.569552 | 4_1:+85325244 | None:intergenic |
| TGTAAGATGGAGAAAATCAA+GGG | 0.569972 | 4_1:+85325199 | None:intergenic |
| TTTCTAGAGAGGAGCGATGA+CGG | 0.572515 | 4_1:-85325775 | Msa0580280:intron |
| CTGGTTGTCCTCAACACTGA+AGG | 0.574863 | 4_1:-85325646 | Msa0580280:CDS |
| AATAGAAAATGGCACATACA+AGG | 0.575931 | 4_1:-85325711 | Msa0580280:CDS |
| ATGCGATCAGATCAAAGCAA+AGG | 0.579992 | 4_1:+85328821 | None:intergenic |
| AAAGTTGATTACCCGCATCT+CGG | 0.580109 | 4_1:+85328754 | None:intergenic |
| TTGTGAATGTTATTTCTGTG+TGG | 0.583983 | 4_1:-85325174 | Msa0580280:three_prime_UTR |
| ACATCTTTAAATACCCTGAA+AGG | 0.597782 | 4_1:+85325356 | None:intergenic |
| CCTGAATCATAATAACATGT+TGG | 0.605355 | 4_1:+85325070 | None:intergenic |
| GGATACTCTTCATTAGGACT+AGG | 0.607922 | 4_1:-85325609 | Msa0580280:CDS |
| CATGTTATTATGATTCAGGT+GGG | 0.608322 | 4_1:-85325066 | Msa0580280:three_prime_UTR |
| AGAAGGTCTTGGATACCGGC+CGG | 0.609106 | 4_1:-85325238 | Msa0580280:three_prime_UTR |
| GCAACAGGGAAGAAGGAACA+AGG | 0.611231 | 4_1:-85328875 | Msa0580280:five_prime_UTR |
| ATACCCCACGTTAAGTGCAC+GGG | 0.614613 | 4_1:-85325269 | Msa0580280:three_prime_UTR |
| ATATTGTACAAGCTTCACAT+TGG | 0.619894 | 4_1:-85328102 | Msa0580280:CDS |
| GATACCCCACGTTAAGTGCA+CGG | 0.622277 | 4_1:-85325270 | Msa0580280:three_prime_UTR |
| GTTATTATGATTCAGGTGGG+TGG | 0.625610 | 4_1:-85325063 | Msa0580280:three_prime_UTR |
| GAATGAACAACTGATCCGGC+CGG | 0.629702 | 4_1:+85325223 | None:intergenic |
| TGCACATTCACCAAATCCCA+AGG | 0.632802 | 4_1:+85325465 | None:intergenic |
| ACTTGCCAACAAACAAGACC+TGG | 0.637361 | 4_1:-85327125 | Msa0580280:intron |
| TCAGATCAAAGCAAAGGGAA+GGG | 0.638092 | 4_1:+85328827 | None:intergenic |
| ACGGCAAGGGAAGTGTGTGA+CGG | 0.660211 | 4_1:-85325756 | Msa0580280:CDS |
| TCTTCGGCAATACCGAGATG+CGG | 0.663090 | 4_1:-85328766 | Msa0580280:CDS |
| GGTACCCGTGCACTTAACGT+GGG | 0.671899 | 4_1:+85325265 | None:intergenic |
| GTACCCGTGCACTTAACGTG+GGG | 0.697074 | 4_1:+85325266 | None:intergenic |
| GCATCAGAAGAAACGCAACA+GGG | 0.698170 | 4_1:-85328889 | Msa0580280:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTACATAATCAATTTT+TGG | + | chr4_1:85325330-85325349 | None:intergenic | 10.0% |
| !!! | TGATTATGTAAAATTGATTT+CGG | - | chr4_1:85325335-85325354 | Msa0580280:three_prime_UTR | 15.0% |
| !! | AAATAAAAATAAATCTACTC+TGG | - | chr4_1:85325500-85325519 | Msa0580280:intron | 15.0% |
| !!! | AGAATTAATTTTGACAAATT+TGG | + | chr4_1:85325531-85325550 | None:intergenic | 15.0% |
| !!! | TTCTTTTTTTCTTTCAAATT+TGG | - | chr4_1:85325769-85325788 | Msa0580280:CDS | 15.0% |
| !!! | TTGAAACTATTTTTTTTTGA+TGG | - | chr4_1:85326116-85326135 | Msa0580280:intron | 15.0% |
| !! | ATTTAAATAGCTGTAATATA+TGG | - | chr4_1:85327034-85327053 | Msa0580280:intron | 15.0% |
| !! | AATATTCATTATTTACTTAC+TGG | - | chr4_1:85327300-85327319 | Msa0580280:CDS | 15.0% |
| !! | GAATTTCTAATTATATTATG+AGG | + | chr4_1:85327750-85327769 | None:intergenic | 15.0% |
| !!! | TCTATTATTTTTATGAATCA+AGG | + | chr4_1:85328807-85328826 | None:intergenic | 15.0% |
| !!! | TGATTTGATTTGATTTGATT+TGG | + | chr4_1:85325034-85325053 | None:intergenic | 20.0% |
| !!! | TAGAGTTTTAATGTATGTTT+GGG | - | chr4_1:85325301-85325320 | Msa0580280:three_prime_UTR | 20.0% |
| !! | AAAATAGTTTCAATTCATGA+GGG | + | chr4_1:85326109-85326128 | None:intergenic | 20.0% |
| !! | AAAAATAGTTTCAATTCATG+AGG | + | chr4_1:85326110-85326129 | None:intergenic | 20.0% |
| !! | AATTGTATTGCAAATATATG+TGG | - | chr4_1:85326183-85326202 | Msa0580280:intron | 20.0% |
| !!! | GTATAAGAATGTTATTTTCA+CGG | - | chr4_1:85326353-85326372 | Msa0580280:intron | 20.0% |
| !! | ATAAGAATAATTGTAGCAAA+AGG | + | chr4_1:85326528-85326547 | None:intergenic | 20.0% |
| !! | CAATTATTCTTATATCCTAT+AGG | - | chr4_1:85326535-85326554 | Msa0580280:intron | 20.0% |
| !!! | AGAACTTTTTTAAGCAAAAA+CGG | - | chr4_1:85327790-85327809 | Msa0580280:intron | 20.0% |
| !! | TTGATGAAATTTGACATATT+GGG | + | chr4_1:85328002-85328021 | None:intergenic | 20.0% |
| !! | ATTGATGAAATTTGACATAT+TGG | + | chr4_1:85328003-85328022 | None:intergenic | 20.0% |
| !! | AATATGTCAAATTTCATCAA+TGG | - | chr4_1:85328002-85328021 | Msa0580280:intron | 20.0% |
| !! | TTGATCTAAAGAATAGAAAA+TGG | - | chr4_1:85328221-85328240 | Msa0580280:intron | 20.0% |
| !!! | GTATATTTTCATTCTTTTGT+AGG | - | chr4_1:85328447-85328466 | Msa0580280:intron | 20.0% |
| !! | TTATATTATTGTGGTCAAAA+GGG | + | chr4_1:85328918-85328937 | None:intergenic | 20.0% |
| !!! | GTAGAGTTTTAATGTATGTT+TGG | - | chr4_1:85325300-85325319 | Msa0580280:three_prime_UTR | 25.0% |
| !!! | AGAGTTTTAATGTATGTTTG+GGG | - | chr4_1:85325302-85325321 | Msa0580280:three_prime_UTR | 25.0% |
| ! | ATTATTATGTAAAAGTGAGC+TGG | - | chr4_1:85325399-85325418 | Msa0580280:three_prime_UTR | 25.0% |
| ! | TCAAACTTGAAGCTAAAAAT+TGG | + | chr4_1:85325468-85325487 | None:intergenic | 25.0% |
| ! | AGAAAGCTACATTAACAATT+TGG | + | chr4_1:85325604-85325623 | None:intergenic | 25.0% |
| !!! | TTTTTCTTTCAAATTTGGTG+TGG | - | chr4_1:85325774-85325793 | Msa0580280:intron | 25.0% |
| ! | AATGCTAATAAAGTTGTGTT+TGG | - | chr4_1:85325981-85326000 | Msa0580280:intron | 25.0% |
| ! | ATTTGCAATACAATTACAGA+GGG | + | chr4_1:85326178-85326197 | None:intergenic | 25.0% |
| ! | TATTTGCAATACAATTACAG+AGG | + | chr4_1:85326179-85326198 | None:intergenic | 25.0% |
| ! | AGCAGAACGAAAATTATAAT+TGG | - | chr4_1:85326254-85326273 | Msa0580280:intron | 25.0% |
| !!! | GTGTTAATTTGTAAGCTTTT+GGG | + | chr4_1:85326692-85326711 | None:intergenic | 25.0% |
| !!! | TGTGTTAATTTGTAAGCTTT+TGG | + | chr4_1:85326693-85326712 | None:intergenic | 25.0% |
| ! | TAGCTGTAATATATGGAATA+TGG | - | chr4_1:85327041-85327060 | Msa0580280:intron | 25.0% |
| ! | ATATATGGAATATGGTTCAA+AGG | - | chr4_1:85327049-85327068 | Msa0580280:intron | 25.0% |
| !! | TGAATATTTTCAACTGTACT+TGG | + | chr4_1:85327288-85327307 | None:intergenic | 25.0% |
| ! | ACAACATATACAAATAGTGA+AGG | + | chr4_1:85327339-85327358 | None:intergenic | 25.0% |
| ! | TTTGTATATGTTGTCATTGT+TGG | - | chr4_1:85327345-85327364 | Msa0580280:intron | 25.0% |
| ! | TTTCTGTTGTCTAAGTTAAA+GGG | - | chr4_1:85327478-85327497 | Msa0580280:intron | 25.0% |
| !!! | AAGGGAAGAAAACTTATTTT+AGG | - | chr4_1:85327496-85327515 | Msa0580280:intron | 25.0% |
| ! | CAAGATTTGAAAAACATACA+CGG | + | chr4_1:85327711-85327730 | None:intergenic | 25.0% |
| !!! | TGTATGTTTTTCAAATCTTG+AGG | - | chr4_1:85327711-85327730 | Msa0580280:intron | 25.0% |
| !!! | GTATGTTTTTCAAATCTTGA+GGG | - | chr4_1:85327712-85327731 | Msa0580280:intron | 25.0% |
| ! | GATTACATAAAGAATTCAAG+TGG | + | chr4_1:85327937-85327956 | None:intergenic | 25.0% |
| ! | GGATATACATAATCATACAA+AGG | + | chr4_1:85328056-85328075 | None:intergenic | 25.0% |
| ! | TTGCAGTTATAGCTAAATTA+AGG | + | chr4_1:85328133-85328152 | None:intergenic | 25.0% |
| ! | TTCAAACCTGAAAAATTAGA+AGG | + | chr4_1:85328368-85328387 | None:intergenic | 25.0% |
| !! | TCATTCTTTTGTAGGTATTT+TGG | - | chr4_1:85328455-85328474 | Msa0580280:intron | 25.0% |
| !!! | GATTGGTAATCAAATTCTTT+TGG | - | chr4_1:85328527-85328546 | Msa0580280:intron | 25.0% |
| ! | GTTATATTATTGTGGTCAAA+AGG | + | chr4_1:85328919-85328938 | None:intergenic | 25.0% |
| ! | AAGTGACAGTTATATTATTG+TGG | + | chr4_1:85328927-85328946 | None:intergenic | 25.0% |
| !! | AATATAACTGTCACTTCTAT+TGG | - | chr4_1:85328931-85328950 | Msa0580280:five_prime_UTR | 25.0% |
| CAGCAATAATTCGATTATGT+CGG | - | chr4_1:85325631-85325650 | Msa0580280:CDS | 30.0% | |
| AGCAATAATTCGATTATGTC+GGG | - | chr4_1:85325632-85325651 | Msa0580280:CDS | 30.0% | |
| !! | TTTCAAATTTGGTGTGGTTT+AGG | - | chr4_1:85325780-85325799 | Msa0580280:intron | 30.0% |
| ATATTGTACAAGCTTCACAT+TGG | - | chr4_1:85325841-85325860 | Msa0580280:intron | 30.0% | |
| TTATCTACTGTTCCTACAAT+TGG | - | chr4_1:85325871-85325890 | Msa0580280:intron | 30.0% | |
| AAATAAAACCCACCAATTGT+AGG | + | chr4_1:85325886-85325905 | None:intergenic | 30.0% | |
| ! | ATGCTTGCTAATTATCTACT+TGG | - | chr4_1:85326031-85326050 | Msa0580280:intron | 30.0% |
| TGTTTAAATATGCTTGTGAG+CGG | - | chr4_1:85326070-85326089 | Msa0580280:intron | 30.0% | |
| TTTGCAATACAATTACAGAG+GGG | + | chr4_1:85326177-85326196 | None:intergenic | 30.0% | |
| TGTATTGCAAATATATGTGG+TGG | - | chr4_1:85326186-85326205 | Msa0580280:intron | 30.0% | |
| GTATTGCAAATATATGTGGT+GGG | - | chr4_1:85326187-85326206 | Msa0580280:intron | 30.0% | |
| TATAAGTTTGTATGCATTGC+AGG | - | chr4_1:85326309-85326328 | Msa0580280:intron | 30.0% | |
| !!! | AGAATGTTATTTTCACGGTT+TGG | - | chr4_1:85326358-85326377 | Msa0580280:intron | 30.0% |
| !!! | GAATGTTATTTTCACGGTTT+GGG | - | chr4_1:85326359-85326378 | Msa0580280:intron | 30.0% |
| !!! | CACTATTTTAACAACACAGA+TGG | - | chr4_1:85326420-85326439 | Msa0580280:intron | 30.0% |
| ! | TTTTAACAACACAGATGGTT+TGG | - | chr4_1:85326425-85326444 | Msa0580280:intron | 30.0% |
| ! | AAAACACAACTTGTGTCATT+TGG | - | chr4_1:85326488-85326507 | Msa0580280:intron | 30.0% |
| !! | GATATATGTTGTTGATAGTC+TGG | - | chr4_1:85326620-85326639 | Msa0580280:intron | 30.0% |
| TAAGTTATAGGTCATTCAGA+TGG | + | chr4_1:85326875-85326894 | None:intergenic | 30.0% | |
| TCTTTACACGTGTAAGTTAT+AGG | + | chr4_1:85326887-85326906 | None:intergenic | 30.0% | |
| CAAAGTCAAATCATGTGAAT+TGG | - | chr4_1:85326913-85326932 | Msa0580280:intron | 30.0% | |
| ACTGGTATGTGCATTAATTA+TGG | + | chr4_1:85326981-85327000 | None:intergenic | 30.0% | |
| TTTCTTTCCTCTTATAATGC+TGG | - | chr4_1:85327079-85327098 | Msa0580280:intron | 30.0% | |
| AAAAACAGAAAACTGCAAGA+CGG | + | chr4_1:85327184-85327203 | None:intergenic | 30.0% | |
| CTTTCTGTTGTCTAAGTTAA+AGG | - | chr4_1:85327477-85327496 | Msa0580280:intron | 30.0% | |
| ! | ATCTAACCAGTGTTGTTAAA+TGG | - | chr4_1:85327522-85327541 | Msa0580280:CDS | 30.0% |
| ! | TCTAACCAGTGTTGTTAAAT+GGG | - | chr4_1:85327523-85327542 | Msa0580280:CDS | 30.0% |
| ATTTGAAAAACATACACGGT+TGG | + | chr4_1:85327707-85327726 | None:intergenic | 30.0% | |
| ! | TTTTGGTCAAGCATAATGAT+GGG | + | chr4_1:85327829-85327848 | None:intergenic | 30.0% |
| !! | TTTTTGGTCAAGCATAATGA+TGG | + | chr4_1:85327830-85327849 | None:intergenic | 30.0% |
| !!! | CACTAGTATCAAGACTTTTT+TGG | + | chr4_1:85327846-85327865 | None:intergenic | 30.0% |
| AGCTAAATTAAGGCAAACTT+AGG | + | chr4_1:85328123-85328142 | None:intergenic | 30.0% | |
| AATAGAAAATGGCACATACA+AGG | - | chr4_1:85328232-85328251 | Msa0580280:intron | 30.0% | |
| ! | CTTCATCCTTCTAATTTTTC+AGG | - | chr4_1:85328359-85328378 | Msa0580280:intron | 30.0% |
| ACATCTTTAAATACCCTGAA+AGG | + | chr4_1:85328590-85328609 | None:intergenic | 30.0% | |
| TGTAAGATGGAGAAAATCAA+GGG | + | chr4_1:85328747-85328766 | None:intergenic | 30.0% | |
| AACATTCACAAAGTGTAAGA+TGG | + | chr4_1:85328760-85328779 | None:intergenic | 30.0% | |
| !! | TTGTGAATGTTATTTCTGTG+TGG | - | chr4_1:85328769-85328788 | Msa0580280:CDS | 30.0% |
| ATCGTGTCACAATATTCTTT+AGG | - | chr4_1:85328845-85328864 | Msa0580280:five_prime_UTR | 30.0% | |
| CCTGAATCATAATAACATGT+TGG | + | chr4_1:85328876-85328895 | None:intergenic | 30.0% | |
| CCAACATGTTATTATGATTC+AGG | - | chr4_1:85328873-85328892 | Msa0580280:five_prime_UTR | 30.0% | |
| ACATGTTATTATGATTCAGG+TGG | - | chr4_1:85328876-85328895 | Msa0580280:five_prime_UTR | 30.0% | |
| CATGTTATTATGATTCAGGT+GGG | - | chr4_1:85328877-85328896 | Msa0580280:five_prime_UTR | 30.0% | |
| AAACTCTTCGATTCCTTCTT+CGG | - | chr4_1:85325161-85325180 | Msa0580280:three_prime_UTR | 35.0% | |
| GCAATAATTCGATTATGTCG+GGG | - | chr4_1:85325633-85325652 | Msa0580280:CDS | 35.0% | |
| TTGAATGGATGCAAACATGA+TGG | - | chr4_1:85326220-85326239 | Msa0580280:intron | 35.0% | |
| !! | ATGCAAACATGATGGTGTTT+TGG | - | chr4_1:85326228-85326247 | Msa0580280:intron | 35.0% |
| ! | AAAGTGTCCTCAATTTCTCT+TGG | + | chr4_1:85326395-85326414 | None:intergenic | 35.0% |
| AAGAGAAATTGAGGACACTT+TGG | - | chr4_1:85326394-85326413 | Msa0580280:intron | 35.0% | |
| GACTGAAAAGTCAGGATATT+GGG | - | chr4_1:85326557-85326576 | Msa0580280:intron | 35.0% | |
| GATATTGGGCTAATGTATCA+AGG | - | chr4_1:85326571-85326590 | Msa0580280:intron | 35.0% | |
| ACACACATGTTATTCCAAAC+AGG | - | chr4_1:85326722-85326741 | Msa0580280:intron | 35.0% | |
| AGATCAATTCAAAGCCTGTT+TGG | + | chr4_1:85326739-85326758 | None:intergenic | 35.0% | |
| !! | ACAGGCTTTGAATTGATCTA+TGG | - | chr4_1:85326740-85326759 | Msa0580280:intron | 35.0% |
| ATGACACTGTTGAGCATAAA+CGG | + | chr4_1:85326792-85326811 | None:intergenic | 35.0% | |
| ATACCAGTGCAAACATTGAA+GGG | - | chr4_1:85326993-85327012 | Msa0580280:intron | 35.0% | |
| GGAATATGGTTCAAAGGTTA+AGG | - | chr4_1:85327055-85327074 | Msa0580280:intron | 35.0% | |
| GTAACAACCAGCATTATAAG+AGG | + | chr4_1:85327089-85327108 | None:intergenic | 35.0% | |
| ACCAGACTAATTACACAGAT+GGG | + | chr4_1:85327214-85327233 | None:intergenic | 35.0% | |
| TACCAGACTAATTACACAGA+TGG | + | chr4_1:85327215-85327234 | None:intergenic | 35.0% | |
| ! | ACTGACTTAGAATGTTCACA+TGG | + | chr4_1:85327413-85327432 | None:intergenic | 35.0% |
| CCACCATAGACAATTTATGA+CGG | - | chr4_1:85327592-85327611 | Msa0580280:CDS | 35.0% | |
| CACCATAGACAATTTATGAC+GGG | - | chr4_1:85327593-85327612 | Msa0580280:CDS | 35.0% | |
| ACCATAGACAATTTATGACG+GGG | - | chr4_1:85327594-85327613 | Msa0580280:CDS | 35.0% | |
| !! | GTGTTTATATGGTGGATGTT+TGG | - | chr4_1:85327656-85327675 | Msa0580280:intron | 35.0% |
| !! | TGTTTTTCAAATCTTGAGGG+AGG | - | chr4_1:85327715-85327734 | Msa0580280:intron | 35.0% |
| ! | TACTAGTGAGACTTGAGTTT+TGG | - | chr4_1:85327858-85327877 | Msa0580280:intron | 35.0% |
| !! | TTTCCTCTTCTTTTCTAGAG+AGG | - | chr4_1:85328157-85328176 | Msa0580280:intron | 35.0% |
| !!! | TTTTGTAGGTATTTTGGCCT+TGG | - | chr4_1:85328461-85328480 | Msa0580280:intron | 35.0% |
| !!! | TTTGTAGGTATTTTGGCCTT+GGG | - | chr4_1:85328462-85328481 | Msa0580280:intron | 35.0% |
| ! | GATTACCAATCACGACATTT+TGG | + | chr4_1:85328518-85328537 | None:intergenic | 35.0% |
| GTGTAAGATGGAGAAAATCA+AGG | + | chr4_1:85328748-85328767 | None:intergenic | 35.0% | |
| TCAGATCAAAGCAAAGGGAA+GGG | + | chr4_1:85325119-85325138 | None:intergenic | 40.0% | |
| ATCAGATCAAAGCAAAGGGA+AGG | + | chr4_1:85325120-85325139 | None:intergenic | 40.0% | |
| TGCGATCAGATCAAAGCAAA+GGG | + | chr4_1:85325124-85325143 | None:intergenic | 40.0% | |
| ATGCGATCAGATCAAAGCAA+AGG | + | chr4_1:85325125-85325144 | None:intergenic | 40.0% | |
| TTTGCTTTGATCTGATCGCA+TGG | - | chr4_1:85325124-85325143 | Msa0580280:three_prime_UTR | 40.0% | |
| TTGCTTTGATCTGATCGCAT+GGG | - | chr4_1:85325125-85325144 | Msa0580280:three_prime_UTR | 40.0% | |
| ! | AAAGTTGATTACCCGCATCT+CGG | + | chr4_1:85325192-85325211 | None:intergenic | 40.0% |
| TAATTCGATTATGTCGGGGT+TGG | - | chr4_1:85325637-85325656 | Msa0580280:CDS | 40.0% | |
| AATTCGATTATGTCGGGGTT+GGG | - | chr4_1:85325638-85325657 | Msa0580280:CDS | 40.0% | |
| !! | AGCTCAACTGGTTTGAACTA+AGG | - | chr4_1:85325662-85325681 | Msa0580280:CDS | 40.0% |
| !! | GCTCAACTGGTTTGAACTAA+GGG | - | chr4_1:85325663-85325682 | Msa0580280:CDS | 40.0% |
| ! | CTGGTTTGAACTAAGGGATA+AGG | - | chr4_1:85325669-85325688 | Msa0580280:CDS | 40.0% |
| TGAACTAAGGGATAAGGAGT+TGG | - | chr4_1:85325675-85325694 | Msa0580280:CDS | 40.0% | |
| GATAAGGAGTTGGAGATTCA+AGG | - | chr4_1:85325685-85325704 | Msa0580280:CDS | 40.0% | |
| TCTACTGTTCCTACAATTGG+TGG | - | chr4_1:85325874-85325893 | Msa0580280:intron | 40.0% | |
| CTACTGTTCCTACAATTGGT+GGG | - | chr4_1:85325875-85325894 | Msa0580280:intron | 40.0% | |
| GTGGGTTTCTGTGAATTGAA+TGG | - | chr4_1:85326205-85326224 | Msa0580280:intron | 40.0% | |
| CCTCAAAGCTTAAACAACAG+TGG | + | chr4_1:85326287-85326306 | None:intergenic | 40.0% | |
| ! | CCACTGTTGTTTAAGCTTTG+AGG | - | chr4_1:85326284-85326303 | Msa0580280:intron | 40.0% |
| !! | ATTTTCACGGTTTGGGATGT+TGG | - | chr4_1:85326366-85326385 | Msa0580280:intron | 40.0% |
| AGAAATTGAGGACACTTTGG+AGG | - | chr4_1:85326397-85326416 | Msa0580280:intron | 40.0% | |
| TCCTATAGGACTGAAAAGTC+AGG | - | chr4_1:85326549-85326568 | Msa0580280:intron | 40.0% | |
| ! | TCCTGACTTTTCAGTCCTAT+AGG | + | chr4_1:85326553-85326572 | None:intergenic | 40.0% |
| GGACTGAAAAGTCAGGATAT+TGG | - | chr4_1:85326556-85326575 | Msa0580280:intron | 40.0% | |
| TTGCTTTCCCAATTCTCTCA+CGG | + | chr4_1:85326647-85326666 | None:intergenic | 40.0% | |
| GAAAGCAAAGCAGGAATTTC+AGG | - | chr4_1:85326659-85326678 | Msa0580280:intron | 40.0% | |
| TGACACTGTTGAGCATAAAC+GGG | + | chr4_1:85326791-85326810 | None:intergenic | 40.0% | |
| TATGCTCAACAGTGTCATCT+TGG | - | chr4_1:85326794-85326813 | Msa0580280:intron | 40.0% | |
| !! | ACATACCAGGTCTTGTTTGT+TGG | + | chr4_1:85326826-85326845 | None:intergenic | 40.0% |
| CAGATCAAGATACACATACC+AGG | + | chr4_1:85326839-85326858 | None:intergenic | 40.0% | |
| CATACCAGTGCAAACATTGA+AGG | - | chr4_1:85326992-85327011 | Msa0580280:intron | 40.0% | |
| TACCAGTGCAAACATTGAAG+GGG | - | chr4_1:85326994-85327013 | Msa0580280:intron | 40.0% | |
| ACCCATCTGTGTAATTAGTC+TGG | - | chr4_1:85327210-85327229 | Msa0580280:intron | 40.0% | |
| ! | TCAACTGTACTTGGTTCTTG+TGG | + | chr4_1:85327279-85327298 | None:intergenic | 40.0% |
| ACACAAGTGACACAATCTGT+TGG | + | chr4_1:85327387-85327406 | None:intergenic | 40.0% | |
| ATGGTCCCATTTAACAACAC+TGG | + | chr4_1:85327531-85327550 | None:intergenic | 40.0% | |
| ! | AGTGTTGTTAAATGGGACCA+TGG | - | chr4_1:85327530-85327549 | Msa0580280:CDS | 40.0% |
| CCGTCATAAATTGTCTATGG+TGG | + | chr4_1:85327595-85327614 | None:intergenic | 40.0% | |
| ACCCCGTCATAAATTGTCTA+TGG | + | chr4_1:85327598-85327617 | None:intergenic | 40.0% | |
| ACATACACGGTTGGAATCAA+TGG | + | chr4_1:85327698-85327717 | None:intergenic | 40.0% | |
| !! | TAGTGAGACTTGAGTTTTGG+TGG | - | chr4_1:85327861-85327880 | Msa0580280:intron | 40.0% |
| TAATCTTTCCCACATGATCG+TGG | - | chr4_1:85327952-85327971 | Msa0580280:intron | 40.0% | |
| AGTGATCAGCTAGCAATACA+AGG | + | chr4_1:85328077-85328096 | None:intergenic | 40.0% | |
| GGATACTCTTCATTAGGACT+AGG | - | chr4_1:85328334-85328353 | Msa0580280:intron | 40.0% | |
| !! | CAATCACGACATTTTGGAAG+TGG | + | chr4_1:85328512-85328531 | None:intergenic | 40.0% |
| CACTTCCAAAATGTCGTGAT+TGG | - | chr4_1:85328510-85328529 | Msa0580280:intron | 40.0% | |
| ATACAGTTACTCTGCCTTTC+AGG | - | chr4_1:85328573-85328592 | Msa0580280:intron | 40.0% | |
| TACAGTTACTCTGCCTTTCA+GGG | - | chr4_1:85328574-85328593 | Msa0580280:intron | 40.0% | |
| GTTATTATGATTCAGGTGGG+TGG | - | chr4_1:85328880-85328899 | Msa0580280:five_prime_UTR | 40.0% | |
| AGCATCAGAAGAAACGCAAC+AGG | - | chr4_1:85325053-85325072 | Msa0580280:three_prime_UTR | 45.0% | |
| GCATCAGAAGAAACGCAACA+GGG | - | chr4_1:85325054-85325073 | Msa0580280:three_prime_UTR | 45.0% | |
| AAGAAACGCAACAGGGAAGA+AGG | - | chr4_1:85325061-85325080 | Msa0580280:three_prime_UTR | 45.0% | |
| !! | GTGGTTTAGGTTGTCATGCT+TGG | - | chr4_1:85325793-85325812 | Msa0580280:intron | 45.0% |
| TTGGAGGCCAAGAGAAATTG+AGG | - | chr4_1:85326385-85326404 | Msa0580280:intron | 45.0% | |
| GAGAATTGGGAAAGCAAAGC+AGG | - | chr4_1:85326650-85326669 | Msa0580280:intron | 45.0% | |
| ACTTGCCAACAAACAAGACC+TGG | - | chr4_1:85326818-85326837 | Msa0580280:intron | 45.0% | |
| TACCCCTTCAATGTTTGCAC+TGG | + | chr4_1:85326999-85327018 | None:intergenic | 45.0% | |
| AGTGCAAACATTGAAGGGGT+AGG | - | chr4_1:85326998-85327017 | Msa0580280:intron | 45.0% | |
| !! | TCTTGTGGTTGGTGGTCTAT+TGG | + | chr4_1:85327264-85327283 | None:intergenic | 45.0% |
| ! | TACTTGGTTCTTGTGGTTGG+TGG | + | chr4_1:85327272-85327291 | None:intergenic | 45.0% |
| ! | CTGTACTTGGTTCTTGTGGT+TGG | + | chr4_1:85327275-85327294 | None:intergenic | 45.0% |
| GCTGCAATGGCGTGTTTATA+TGG | - | chr4_1:85327645-85327664 | Msa0580280:intron | 45.0% | |
| GCAATGGCGTGTTTATATGG+TGG | - | chr4_1:85327648-85327667 | Msa0580280:intron | 45.0% | |
| !! | TCAATGGCGGATATGATGGA+AGG | + | chr4_1:85327682-85327701 | None:intergenic | 45.0% |
| !! | GGAATCAATGGCGGATATGA+TGG | + | chr4_1:85327686-85327705 | None:intergenic | 45.0% |
| TACACGGTTGGAATCAATGG+CGG | + | chr4_1:85327695-85327714 | None:intergenic | 45.0% | |
| GTCATGAACCACGATCATGT+GGG | + | chr4_1:85327963-85327982 | None:intergenic | 45.0% | |
| AGTCATGAACCACGATCATG+TGG | + | chr4_1:85327964-85327983 | None:intergenic | 45.0% | |
| ! | GCTCCTCTCTAGAAAAGAAG+AGG | + | chr4_1:85328163-85328182 | None:intergenic | 45.0% |
| ! | TTTCTAGAGAGGAGCGATGA+CGG | - | chr4_1:85328168-85328187 | Msa0580280:intron | 45.0% |
| ! | TAAGGGTGATGGCCTTTATG+AGG | - | chr4_1:85328267-85328286 | Msa0580280:intron | 45.0% |
| ! | AAGGGTGATGGCCTTTATGA+GGG | - | chr4_1:85328268-85328287 | Msa0580280:intron | 45.0% |
| TGATGGCCTTTATGAGGGTT+TGG | - | chr4_1:85328273-85328292 | Msa0580280:intron | 45.0% | |
| ACCAGTCCAAACCCTCATAA+AGG | + | chr4_1:85328282-85328301 | None:intergenic | 45.0% | |
| CTTCATCTCCTTCAGTGTTG+AGG | + | chr4_1:85328308-85328327 | None:intergenic | 45.0% | |
| CTCAACACTGAAGGAGATGA+AGG | - | chr4_1:85328306-85328325 | Msa0580280:intron | 45.0% | |
| GCTGCTGGATACTCTTCATT+AGG | - | chr4_1:85328328-85328347 | Msa0580280:intron | 45.0% | |
| !!! | GGTATTTTGGCCTTGGGATT+TGG | - | chr4_1:85328468-85328487 | Msa0580280:intron | 45.0% |
| TGCACATTCACCAAATCCCA+AGG | + | chr4_1:85328481-85328500 | None:intergenic | 45.0% | |
| GGTATCCAAGACCTTCTATC+CGG | + | chr4_1:85328702-85328721 | None:intergenic | 45.0% | |
| GGATAGAAGGTCTTGGATAC+CGG | - | chr4_1:85328701-85328720 | Msa0580280:intron | 45.0% | |
| GGGAGAATGAACAACTGATC+CGG | + | chr4_1:85328727-85328746 | None:intergenic | 45.0% | |
| GCAACAGGGAAGAAGGAACA+AGG | - | chr4_1:85325068-85325087 | Msa0580280:three_prime_UTR | 50.0% | |
| CATCTCGGTATTGCCGAAGA+AGG | + | chr4_1:85325177-85325196 | None:intergenic | 50.0% | |
| TCTTCGGCAATACCGAGATG+CGG | - | chr4_1:85325177-85325196 | Msa0580280:three_prime_UTR | 50.0% | |
| !! | ATGCTTGGTCTTGATGCTGC+TGG | - | chr4_1:85325808-85325827 | Msa0580280:intron | 50.0% |
| ! | TTCACGGTTTGGGATGTTGG+AGG | - | chr4_1:85326369-85326388 | Msa0580280:intron | 50.0% |
| AGTCTGGACCGTGAGAGAAT+TGG | - | chr4_1:85326636-85326655 | Msa0580280:intron | 50.0% | |
| GTCTGGACCGTGAGAGAATT+GGG | - | chr4_1:85326637-85326656 | Msa0580280:intron | 50.0% | |
| GATACGCATGCACGTGCAAA+AGG | + | chr4_1:85327127-85327146 | None:intergenic | 50.0% | |
| !! | TGGTTGGTGGTCTATTGGCA+GGG | + | chr4_1:85327259-85327278 | None:intergenic | 50.0% |
| !!! | GGAATGGCATGGCGGATTTT+TGG | - | chr4_1:85327565-85327584 | Msa0580280:CDS | 50.0% |
| AAACACGCCATTGCAGCCTA+TGG | + | chr4_1:85327642-85327661 | None:intergenic | 50.0% | |
| !! | AGGGAAGTGTGTGACGGATT+AGG | - | chr4_1:85328193-85328212 | Msa0580280:intron | 50.0% |
| ! | ACAAGGCACCTGTGCACTTA+AGG | - | chr4_1:85328249-85328268 | Msa0580280:intron | 50.0% |
| ! | CAAGGCACCTGTGCACTTAA+GGG | - | chr4_1:85328250-85328269 | Msa0580280:intron | 50.0% |
| ACCTGTGCACTTAAGGGTGA+TGG | - | chr4_1:85328256-85328275 | Msa0580280:intron | 50.0% | |
| GCCTTTATGAGGGTTTGGAC+TGG | - | chr4_1:85328278-85328297 | Msa0580280:intron | 50.0% | |
| CTGGTTGTCCTCAACACTGA+AGG | - | chr4_1:85328297-85328316 | Msa0580280:intron | 50.0% | |
| GATACCCCACGTTAAGTGCA+CGG | - | chr4_1:85328673-85328692 | Msa0580280:intron | 50.0% | |
| ATACCCCACGTTAAGTGCAC+GGG | - | chr4_1:85328674-85328693 | Msa0580280:intron | 50.0% | |
| GAATGAACAACTGATCCGGC+CGG | + | chr4_1:85328723-85328742 | None:intergenic | 50.0% | |
| CTTCGGCAATACCGAGATGC+GGG | - | chr4_1:85325178-85325197 | Msa0580280:three_prime_UTR | 55.0% | |
| ! | CATGCACGTGCAAAAGGTGC+AGG | + | chr4_1:85327121-85327140 | None:intergenic | 55.0% |
| !! | GGTTGGTGGTCTATTGGCAG+GGG | + | chr4_1:85327258-85327277 | None:intergenic | 55.0% |
| !! | GTGGTTGGTGGTCTATTGGC+AGG | + | chr4_1:85327260-85327279 | None:intergenic | 55.0% |
| !! | AGCCTATGGTGTTGCCATGG+CGG | + | chr4_1:85327628-85327647 | None:intergenic | 55.0% |
| !! | TGCAGCCTATGGTGTTGCCA+TGG | + | chr4_1:85327631-85327650 | None:intergenic | 55.0% |
| GGCAACACCATAGGCTGCAA+TGG | - | chr4_1:85327632-85327651 | Msa0580280:intron | 55.0% | |
| ! | ACGGCAAGGGAAGTGTGTGA+CGG | - | chr4_1:85328187-85328206 | Msa0580280:intron | 55.0% |
| GCCATCACCCTTAAGTGCAC+AGG | + | chr4_1:85328260-85328279 | None:intergenic | 55.0% | |
| CTGAAGGAGATGAAGGCTGC+TGG | - | chr4_1:85328313-85328332 | Msa0580280:intron | 55.0% | |
| GTACCCGTGCACTTAACGTG+GGG | + | chr4_1:85328680-85328699 | None:intergenic | 55.0% | |
| GGTACCCGTGCACTTAACGT+GGG | + | chr4_1:85328681-85328700 | None:intergenic | 55.0% | |
| CACGTTAAGTGCACGGGTAC+CGG | - | chr4_1:85328680-85328699 | Msa0580280:intron | 55.0% | |
| !! | GGGTACCGGATAGAAGGTCT+TGG | - | chr4_1:85328694-85328713 | Msa0580280:intron | 55.0% |
| AGAAGGTCTTGGATACCGGC+CGG | - | chr4_1:85328705-85328724 | Msa0580280:intron | 55.0% | |
| TCGGGGTTGGGTAGCTCAAC+TGG | - | chr4_1:85325650-85325669 | Msa0580280:CDS | 60.0% | |
| !! | CCTATGGTGTTGCCATGGCG+GGG | + | chr4_1:85327626-85327645 | None:intergenic | 60.0% |
| !! | GCCTATGGTGTTGCCATGGC+GGG | + | chr4_1:85327627-85327646 | None:intergenic | 60.0% |
| ! | AGAGAGGAGCGATGACGGCA+AGG | - | chr4_1:85328173-85328192 | Msa0580280:intron | 60.0% |
| ! | GAGAGGAGCGATGACGGCAA+GGG | - | chr4_1:85328174-85328193 | Msa0580280:intron | 60.0% |
| CGGTACCCGTGCACTTAACG+TGG | + | chr4_1:85328682-85328701 | None:intergenic | 60.0% | |
| !! | GTGCACGGGTACCGGATAGA+AGG | - | chr4_1:85328688-85328707 | Msa0580280:intron | 60.0% |
| ATGGGACCATGGCGCTGCCA+TGG | - | chr4_1:85327541-85327560 | Msa0580280:CDS | 65.0% | |
| ATTCCGCCATGGCAGCGCCA+TGG | + | chr4_1:85327550-85327569 | None:intergenic | 65.0% | |
| ! | ATGGCGCTGCCATGGCGGAA+TGG | - | chr4_1:85327549-85327568 | Msa0580280:CDS | 65.0% |
| ! | GCTGCCATGGCGGAATGGCA+TGG | - | chr4_1:85327554-85327573 | Msa0580280:CDS | 65.0% |
| ! | GCCATGGCGGAATGGCATGG+CGG | - | chr4_1:85327557-85327576 | Msa0580280:CDS | 65.0% |
| TCCGCCATGCCATTCCGCCA+TGG | + | chr4_1:85327561-85327580 | None:intergenic | 65.0% | |
| !! | ATGGTGTTGCCATGGCGGGG+CGG | + | chr4_1:85327623-85327642 | None:intergenic | 65.0% |
| CCCCGCCATGGCAACACCAT+AGG | - | chr4_1:85327623-85327642 | Msa0580280:intron | 65.0% | |
| GGACCATGGCGCTGCCATGG+CGG | - | chr4_1:85327544-85327563 | Msa0580280:CDS | 70.0% | |
| !! | TGGTGTTGCCATGGCGGGGC+GGG | + | chr4_1:85327622-85327641 | None:intergenic | 70.0% |
| !! | ACGGGGTGCCCGCCCCGCCA+TGG | - | chr4_1:85327611-85327630 | Msa0580280:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 85324997 | 85328968 | 85324997 | ID=Msa0580280;Name=Msa0580280 |
| chr4_1 | mRNA | 85324997 | 85328968 | 85324997 | ID=Msa0580280-mRNA-1;Parent=Msa0580280;Name=Msa0580280-mRNA-1;_AED=0.08;_eAED=0.08;_QI=146|1|1|1|0.83|0.71|7|508|195 |
| chr4_1 | exon | 85324997 | 85325496 | 85324997 | ID=Msa0580280-mRNA-1:exon:31329;Parent=Msa0580280-mRNA-1 |
| chr4_1 | exon | 85325585 | 85325790 | 85325585 | ID=Msa0580280-mRNA-1:exon:31328;Parent=Msa0580280-mRNA-1 |
| chr4_1 | exon | 85327126 | 85327191 | 85327126 | ID=Msa0580280-mRNA-1:exon:31327;Parent=Msa0580280-mRNA-1 |
| chr4_1 | exon | 85327285 | 85327344 | 85327285 | ID=Msa0580280-mRNA-1:exon:31326;Parent=Msa0580280-mRNA-1 |
| chr4_1 | exon | 85327519 | 85327634 | 85327519 | ID=Msa0580280-mRNA-1:exon:31325;Parent=Msa0580280-mRNA-1 |
| chr4_1 | exon | 85328073 | 85328163 | 85328073 | ID=Msa0580280-mRNA-1:exon:31324;Parent=Msa0580280-mRNA-1 |
| chr4_1 | exon | 85328766 | 85328968 | 85328766 | ID=Msa0580280-mRNA-1:exon:31323;Parent=Msa0580280-mRNA-1 |
| chr4_1 | five_prime_UTR | 85328823 | 85328968 | 85328823 | ID=Msa0580280-mRNA-1:five_prime_utr;Parent=Msa0580280-mRNA-1 |
| chr4_1 | CDS | 85328766 | 85328822 | 85328766 | ID=Msa0580280-mRNA-1:cds;Parent=Msa0580280-mRNA-1 |
| chr4_1 | CDS | 85328073 | 85328163 | 85328073 | ID=Msa0580280-mRNA-1:cds;Parent=Msa0580280-mRNA-1 |
| chr4_1 | CDS | 85327519 | 85327634 | 85327519 | ID=Msa0580280-mRNA-1:cds;Parent=Msa0580280-mRNA-1 |
| chr4_1 | CDS | 85327285 | 85327344 | 85327285 | ID=Msa0580280-mRNA-1:cds;Parent=Msa0580280-mRNA-1 |
| chr4_1 | CDS | 85327126 | 85327191 | 85327126 | ID=Msa0580280-mRNA-1:cds;Parent=Msa0580280-mRNA-1 |
| chr4_1 | CDS | 85325593 | 85325790 | 85325593 | ID=Msa0580280-mRNA-1:cds;Parent=Msa0580280-mRNA-1 |
| chr4_1 | three_prime_UTR | 85325585 | 85325592 | 85325585 | ID=Msa0580280-mRNA-1:three_prime_utr;Parent=Msa0580280-mRNA-1 |
| chr4_1 | three_prime_UTR | 85324997 | 85325496 | 85324997 | ID=Msa0580280-mRNA-1:three_prime_utr;Parent=Msa0580280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
