AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0638760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638760 MtrunA17_Chr4g0050221 97.452 628 16 0 3 630 5 632 0.0 1259
Msa0638760 MtrunA17_Chr4g0050201 73.028 545 141 2 68 610 1 541 0.0 808
Msa0638760 MtrunA17_Chr4g0050251 60.650 615 235 7 3 611 45 658 0.0 769
Msa0638760 MtrunA17_Chr4g0050291 61.218 624 229 8 1 613 18 639 0.0 766
Msa0638760 MtrunA17_Chr4g0050261 56.146 659 241 8 3 614 45 702 0.0 752
Msa0638760 MtrunA17_Chr4g0026731 55.517 580 230 6 62 614 12 590 0.0 664
Msa0638760 MtrunA17_Chr6g0477811 46.753 616 307 7 11 611 47 656 0.0 568
Msa0638760 MtrunA17_Chr4g0039261 41.824 636 346 7 1 618 21 650 5.92e-177 518
Msa0638760 MtrunA17_Chr4g0039251 44.462 623 324 8 4 609 66 683 4.64e-175 515
Msa0638760 MtrunA17_Chr4g0039231 38.411 604 302 7 71 609 2 600 1.30e-137 416
Msa0638760 MtrunA17_Chr2g0327241 34.522 617 374 12 5 602 101 706 1.66e-113 356
Msa0638760 MtrunA17_Chr1g0208391 30.695 619 393 14 4 606 66 664 8.39e-79 264
Msa0638760 MtrunA17_Chr2g0316301 28.425 584 386 15 24 600 68 626 2.59e-73 248
Msa0638760 MtrunA17_Chr1g0176451 30.536 560 340 17 16 549 12 548 5.14e-68 232
Msa0638760 MtrunA17_Chr1g0200651 30.769 637 374 23 4 604 63 668 8.82e-68 233
Msa0638760 MtrunA17_Chr1g0213091 28.857 551 348 9 27 545 120 658 2.90e-67 234
Msa0638760 MtrunA17_Chr7g0263351 29.068 547 364 10 17 546 115 654 7.34e-67 233
Msa0638760 MtrunA17_Chr8g0384391 28.261 598 390 14 29 604 56 636 9.35e-67 230
Msa0638760 MtrunA17_Chr5g0408061 29.335 617 392 17 9 604 45 638 1.46e-66 229
Msa0638760 MtrunA17_Chr1g0202431 30.118 591 371 15 29 608 50 609 5.70e-65 224
Msa0638760 MtrunA17_Chr1g0176441 29.496 556 342 15 25 549 167 703 3.72e-62 219
Msa0638760 MtrunA17_Chr3g0130331 27.040 625 407 15 12 610 41 642 9.10e-62 216
Msa0638760 MtrunA17_Chr4g0065231 27.759 580 390 12 29 600 75 633 1.17e-61 216
Msa0638760 MtrunA17_Chr1g0198931 30.179 613 376 20 9 596 85 670 1.73e-61 216
Msa0638760 MtrunA17_Chr7g0267971 29.910 555 337 14 27 549 158 692 2.25e-61 217
Msa0638760 MtrunA17_Chr3g0102731 32.803 503 304 15 29 512 98 585 4.95e-59 208
Msa0638760 MtrunA17_Chr8g0359931 29.401 551 347 16 10 546 49 571 1.20e-58 207
Msa0638760 MtrunA17_Chr2g0318061 35.917 387 219 10 3 382 13 377 4.48e-58 200
Msa0638760 MtrunA17_Chr2g0332221 28.595 605 372 19 24 602 850 1420 1.56e-55 204
Msa0638760 MtrunA17_Chr2g0332221 23.923 673 432 17 15 626 153 806 7.95e-35 141
Msa0638760 MtrunA17_Chr5g0446901 30.970 536 292 17 20 512 100 600 2.20e-55 198
Msa0638760 MtrunA17_Chr2g0332241 28.430 605 373 19 24 602 851 1421 2.82e-55 203
Msa0638760 MtrunA17_Chr2g0332241 25.342 584 367 17 15 547 153 718 3.98e-33 136
Msa0638760 MtrunA17_Chr7g0262251 29.590 561 335 17 24 549 822 1357 2.13e-54 201
Msa0638760 MtrunA17_Chr7g0262251 24.877 611 419 13 16 599 162 759 4.84e-38 151
Msa0638760 MtrunA17_Chr2g0332211 28.099 605 375 19 24 602 934 1504 3.44e-54 200
Msa0638760 MtrunA17_Chr2g0332211 24.957 581 369 15 15 545 234 797 2.23e-33 137
Msa0638760 MtrunA17_Chr0c20g0493841 29.596 544 340 14 22 545 850 1370 2.30e-53 197
Msa0638760 MtrunA17_Chr0c20g0493841 26.877 666 419 18 16 630 154 802 7.94e-49 184
Msa0638760 MtrunA17_Chr4g0003981 28.047 599 384 17 24 603 861 1431 4.83e-53 197
Msa0638760 MtrunA17_Chr4g0003981 29.897 291 166 7 19 275 163 449 4.57e-32 133
Msa0638760 MtrunA17_Chr3g0138261 31.111 540 332 19 24 545 865 1382 1.35e-52 195
Msa0638760 MtrunA17_Chr3g0138261 25.637 589 357 19 19 550 156 720 4.84e-34 139
Msa0638760 MtrunA17_Chr4g0003971 29.146 597 380 19 24 603 820 1390 5.03e-52 194
Msa0638760 MtrunA17_Chr4g0003971 25.654 573 371 16 19 547 151 712 8.44e-35 141
Msa0638760 MtrunA17_Chr1g0148841 29.685 539 341 16 24 545 872 1389 1.08e-51 192
Msa0638760 MtrunA17_Chr1g0148841 25.346 651 382 21 15 597 152 766 1.83e-32 134
Msa0638760 MtrunA17_Chr8g0393191 39.636 275 145 7 5 276 57 313 7.96e-50 186
Msa0638760 MtrunA17_Chr8g0393191 25.519 337 204 13 296 607 500 814 1.03e-14 77.8
Msa0638760 MtrunA17_Chr1g0148811 29.379 531 341 12 24 539 849 1360 1.19e-49 186
Msa0638760 MtrunA17_Chr1g0148811 31.802 283 153 8 15 262 141 418 8.83e-29 122
Msa0638760 MtrunA17_Chr3g0104621 28.102 548 344 15 24 545 759 1282 2.56e-49 186
Msa0638760 MtrunA17_Chr3g0104621 25.960 651 385 19 12 597 33 651 4.19e-39 154
Msa0638760 MtrunA17_Chr1g0171351 27.172 541 340 13 24 539 889 1400 5.68e-49 184
Msa0638760 MtrunA17_Chr1g0171351 29.181 281 161 6 29 275 176 452 4.16e-28 120
Msa0638760 MtrunA17_Chr7g0261971 28.302 530 321 16 24 525 870 1368 6.29e-49 184
Msa0638760 MtrunA17_Chr7g0261971 30.584 291 164 7 19 275 148 434 2.16e-31 131
Msa0638760 MtrunA17_Chr7g0262231 28.273 527 327 17 24 529 878 1374 1.34e-48 183
Msa0638760 MtrunA17_Chr7g0262231 23.509 570 387 14 19 547 152 713 3.65e-30 127
Msa0638760 MtrunA17_Chr7g0262241 27.154 534 322 15 24 525 875 1373 2.31e-48 182
Msa0638760 MtrunA17_Chr7g0262241 24.084 573 380 15 19 547 152 713 3.69e-31 130
Msa0638760 MtrunA17_Chr7g0261951 28.571 525 326 15 24 525 874 1372 3.83e-48 182
Msa0638760 MtrunA17_Chr7g0261951 24.828 580 367 18 19 547 152 713 3.42e-30 127
Msa0638760 MtrunA17_Chr7g0262261 27.569 613 383 20 24 603 798 1382 4.00e-47 179
Msa0638760 MtrunA17_Chr7g0262261 23.937 635 405 16 16 597 120 729 4.04e-33 136
Msa0638760 MtrunA17_Chr5g0429871 28.681 523 345 10 29 539 667 1173 4.91e-47 179
Msa0638760 MtrunA17_Chr5g0429871 24.456 597 346 17 68 597 17 575 1.88e-33 137
Msa0638760 MtrunA17_Chr7g0262221 27.788 547 315 17 24 529 849 1356 2.66e-46 176
Msa0638760 MtrunA17_Chr7g0262221 31.502 273 167 7 19 275 153 421 2.07e-32 134
Msa0638760 MtrunA17_Chr8g0340651 29.081 533 321 16 24 532 900 1399 3.37e-46 176
Msa0638760 MtrunA17_Chr8g0340651 25.392 638 388 20 21 597 170 780 9.03e-37 147
Msa0638760 MtrunA17_Chr2g0331081 28.727 550 338 17 25 549 887 1407 6.43e-46 175
Msa0638760 MtrunA17_Chr2g0331081 25.727 653 391 19 19 606 169 792 2.15e-44 171
Msa0638760 MtrunA17_Chr7g0264441 38.321 274 156 8 2 268 250 517 1.32e-45 173
Msa0638760 MtrunA17_Chr5g0411621 37.931 261 144 6 29 284 51 298 1.40e-45 172
Msa0638760 MtrunA17_Chr5g0411621 23.571 280 202 6 330 607 455 724 7.14e-18 87.8
Msa0638760 MtrunA17_Chr1g0199471 37.546 269 159 5 3 268 493 755 5.35e-45 172
Msa0638760 MtrunA17_Chr4g0062871 27.222 540 353 17 24 545 839 1356 8.44e-45 172
Msa0638760 MtrunA17_Chr4g0062871 26.989 641 400 17 24 612 145 769 1.79e-37 149
Msa0638760 MtrunA17_Chr7g0265991 26.391 557 337 14 23 539 53 576 7.07e-43 164
Msa0638760 MtrunA17_Chr4g0004021 30.184 434 264 14 24 439 858 1270 1.35e-42 165
Msa0638760 MtrunA17_Chr4g0004021 30.272 294 161 8 19 275 161 447 2.84e-31 130
Msa0638760 MtrunA17_Chr7g0265981 26.326 528 361 11 24 539 878 1389 1.38e-42 165
Msa0638760 MtrunA17_Chr7g0265981 24.020 587 385 16 9 545 158 733 4.36e-33 136
Msa0638760 MtrunA17_Chr1g0198291 26.354 554 377 14 24 563 889 1425 1.89e-42 165
Msa0638760 MtrunA17_Chr1g0198291 29.537 281 160 7 29 275 189 465 1.68e-28 122
Msa0638760 MtrunA17_Chr4g0069211 26.506 664 413 21 16 630 153 790 8.05e-42 162
Msa0638760 MtrunA17_Chr4g0069211 39.904 208 118 4 22 226 838 1041 1.94e-31 130
Msa0638760 MtrunA17_Chr1g0180971 37.349 249 143 5 26 268 410 651 3.88e-41 159
Msa0638760 MtrunA17_Chr7g0265971 26.557 546 351 12 24 539 870 1395 1.13e-39 156
Msa0638760 MtrunA17_Chr7g0265971 23.339 587 389 16 9 545 152 727 5.76e-33 135
Msa0638760 MtrunA17_Chr7g0261981 26.062 518 322 14 24 525 856 1328 1.32e-39 156
Msa0638760 MtrunA17_Chr7g0261981 30.272 294 161 8 19 275 152 438 8.75e-31 129
Msa0638760 MtrunA17_Chr4g0028621 35.955 267 162 6 5 268 485 745 4.74e-37 148
Msa0638760 MtrunA17_Chr7g0265961 24.768 646 394 20 29 618 182 791 2.76e-36 146
Msa0638760 MtrunA17_Chr7g0265961 24.459 601 393 15 24 602 826 1387 6.91e-35 142
Msa0638760 MtrunA17_Chr7g0266001 23.853 654 413 19 9 599 37 668 1.24e-34 139
Msa0638760 MtrunA17_Chr3g0093331 32.889 225 145 3 49 270 18 239 1.37e-32 126
Msa0638760 MtrunA17_Chr7g0262321 26.268 552 345 17 24 548 557 1073 4.91e-32 132
Msa0638760 MtrunA17_Chr7g0262321 25.170 294 212 4 129 417 18 308 1.75e-17 87.0
Msa0638760 MtrunA17_Chr6g0472481 36.098 205 125 3 24 226 8 208 1.63e-31 123
Msa0638760 MtrunA17_Chr4g0050191 64.865 74 19 1 2 68 32 105 1.30e-21 90.1
Msa0638760 MtrunA17_Chr7g0215001 24.740 384 227 14 176 521 1 360 1.71e-17 84.7
Msa0638760 MtrunA17_Chr4g0026741 63.333 60 20 2 8 65 46 105 9.69e-17 77.4
Msa0638760 MtrunA17_Chr4g0050241 35.938 128 60 3 491 618 65 170 7.50e-16 76.3
Msa0638760 MtrunA17_Chr3g0132711 30.583 206 121 6 41 240 221 410 1.39e-14 77.0
Msa0638760 MtrunA17_Chr7g0257341 28.718 195 118 5 15 201 1462 1643 7.85e-14 75.5
Msa0638760 MtrunA17_Chr7g0257341 30.000 190 114 5 1 184 544 720 4.34e-11 66.6
Msa0638760 MtrunA17_Chr1g0193991 29.778 225 140 8 23 242 400 611 1.04e-13 74.7
Msa0638760 MtrunA17_Chr3g0128381 31.285 179 113 5 29 203 407 579 1.69e-13 73.6
Msa0638760 MtrunA17_Chr1g0194031 29.333 225 141 8 23 242 395 606 2.02e-13 73.9
Msa0638760 MtrunA17_Chr4g0039221 52.542 59 26 2 9 65 7 65 3.53e-13 65.1
Msa0638760 MtrunA17_Chr6g0451911 28.571 259 161 10 28 276 377 621 3.74e-13 73.2
Msa0638760 MtrunA17_Chr4g0060401 22.903 310 202 9 22 321 623 905 4.28e-13 72.8
Msa0638760 MtrunA17_Chr3g0093041 27.948 229 143 6 41 263 207 419 8.72e-13 71.2
Msa0638760 MtrunA17_Chr7g0257321 51.852 54 25 1 9 62 1 53 9.09e-13 63.5
Msa0638760 MtrunA17_Chr7g0227391 28.125 224 135 10 29 242 442 649 1.09e-12 71.2
Msa0638760 MtrunA17_Chr4g0047831 40.506 79 44 1 152 230 8 83 1.47e-12 63.9
Msa0638760 MtrunA17_Chr1g0180601 31.278 227 131 9 29 248 416 624 3.09e-12 70.1
Msa0638760 MtrunA17_Chr4g0069411 27.526 287 174 12 24 304 408 666 3.47e-12 70.1
Msa0638760 MtrunA17_Chr5g0412741 28.037 214 131 6 38 242 482 681 3.61e-12 69.7
Msa0638760 MtrunA17_Chr4g0041871 30.244 205 125 8 40 239 371 562 3.65e-12 69.7
Msa0638760 MtrunA17_Chr4g0041871 26.754 228 141 10 24 242 1018 1228 1.66e-11 67.8
Msa0638760 MtrunA17_Chr4g0069221 22.917 288 207 6 268 545 33 315 3.67e-12 68.6
Msa0638760 MtrunA17_Chr6g0481921 27.803 223 135 9 29 242 288 493 4.14e-12 69.7
Msa0638760 MtrunA17_Chr2g0285301 28.251 223 134 9 29 242 381 586 7.01e-12 68.9
Msa0638760 MtrunA17_Chr4g0061601 27.313 227 149 7 28 251 403 616 8.90e-12 68.2
Msa0638760 MtrunA17_Chr3g0138211 26.433 314 195 13 24 331 408 691 1.00e-11 68.6
Msa0638760 MtrunA17_Chr5g0433051 27.602 221 134 7 27 238 479 682 1.41e-11 67.8
Msa0638760 MtrunA17_Chr5g0410921 31.250 208 123 7 40 241 1017 1210 1.52e-11 67.8
Msa0638760 MtrunA17_Chr7g0264631 30.180 222 133 8 28 242 442 648 2.30e-11 67.4
Msa0638760 MtrunA17_Chr4g0069351 29.412 221 138 9 27 242 393 600 2.73e-11 67.0
Msa0638760 MtrunA17_Chr3g0093091 25.110 227 148 7 22 242 630 840 2.91e-11 67.0
Msa0638760 MtrunA17_Chr6g0452141 30.222 225 139 8 23 241 1028 1240 3.07e-11 67.0
Msa0638760 MtrunA17_Chr6g0452141 26.616 263 169 10 24 276 374 622 8.21e-11 65.5
Msa0638760 MtrunA17_Chr6g0452171 29.954 217 140 6 28 241 1036 1243 3.52e-11 66.6
Msa0638760 MtrunA17_Chr6g0452111 28.400 250 155 10 40 279 396 631 6.30e-11 65.9
Msa0638760 MtrunA17_Chr6g0452061 29.224 219 139 7 28 241 545 752 6.57e-11 65.5
Msa0638760 MtrunA17_Chr4g0060431 22.759 290 187 10 40 319 628 890 7.27e-11 65.5
Msa0638760 MtrunA17_Chr6g0452041 30.415 217 139 6 28 241 1035 1242 8.22e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638760 AT1G17840.1 46.992 615 306 6 11 611 50 658 0.0 554
Msa0638760 AT3G21090.1 43.281 640 335 10 8 629 22 651 0.0 531
Msa0638760 AT1G51500.1 43.829 632 328 9 8 620 21 644 7.62e-176 516
Msa0638760 AT1G51460.1 38.836 636 351 9 6 611 5 632 7.31e-157 467
Msa0638760 AT2G28070.2 33.170 612 380 11 5 600 108 706 2.13e-109 346
Msa0638760 AT2G28070.1 33.170 612 380 11 5 600 108 706 2.13e-109 346
Msa0638760 AT2G01320.8 30.366 573 365 14 9 562 68 625 8.58e-76 255
Msa0638760 AT2G01320.5 30.366 573 365 14 9 562 68 625 8.58e-76 255
Msa0638760 AT2G01320.2 30.396 556 358 12 9 550 68 608 7.19e-75 254
Msa0638760 AT2G01320.3 30.396 556 358 12 9 550 68 608 9.37e-75 254
Msa0638760 AT2G01320.1 30.396 556 358 12 9 550 68 608 1.21e-74 253
Msa0638760 AT2G01320.4 30.396 556 358 12 9 550 68 608 1.21e-74 253
Msa0638760 AT2G13610.1 28.125 608 404 12 14 604 47 638 1.92e-74 251
Msa0638760 AT3G55100.1 30.361 527 352 9 27 546 49 567 7.39e-73 247
Msa0638760 AT3G55100.2 30.361 527 352 9 27 546 49 567 7.39e-73 247
Msa0638760 AT3G55110.1 30.314 541 340 10 27 546 89 613 1.26e-71 245
Msa0638760 AT1G31770.1 29.293 594 382 15 25 604 77 646 2.08e-71 243
Msa0638760 AT2G37360.1 30.826 545 347 12 25 549 129 663 1.74e-69 240
Msa0638760 AT3G53510.1 31.657 537 344 10 25 549 122 647 3.56e-69 239
Msa0638760 AT1G53270.1 28.571 595 373 14 7 596 29 576 5.12e-69 235
Msa0638760 AT5G13580.1 30.869 541 337 10 27 545 106 631 5.97e-68 235
Msa0638760 AT3G55130.1 28.254 630 379 17 27 597 97 712 6.33e-68 235
Msa0638760 AT4G27420.1 35.282 479 272 13 9 464 35 498 5.96e-67 231
Msa0638760 AT2G01320.7 31.410 468 294 11 9 462 68 522 1.10e-66 227
Msa0638760 AT2G01320.6 31.410 468 294 11 9 462 68 522 1.10e-66 227
Msa0638760 AT1G71960.1 31.321 613 368 19 21 605 75 662 1.19e-66 231
Msa0638760 AT4G25750.1 29.580 595 370 17 16 602 17 570 4.01e-66 227
Msa0638760 AT5G19410.2 27.711 581 379 14 25 596 71 619 1.96e-65 226
Msa0638760 AT5G19410.1 27.711 581 379 14 25 596 62 610 2.30e-65 226
Msa0638760 AT5G52860.1 31.142 578 342 18 29 596 44 575 1.12e-64 223
Msa0638760 AT3G55090.1 27.603 634 393 12 21 597 99 723 3.71e-64 225
Msa0638760 AT3G25620.2 30.394 533 337 14 24 538 94 610 4.94e-61 215
Msa0638760 AT2G39350.1 27.866 567 366 11 14 549 94 648 1.09e-60 216
Msa0638760 AT5G06530.3 30.392 510 323 13 27 512 177 678 8.24e-60 212
Msa0638760 AT5G06530.2 28.760 605 371 20 27 604 177 748 1.37e-59 213
Msa0638760 AT5G06530.1 28.760 605 371 20 27 604 177 748 1.37e-59 213
Msa0638760 AT3G13220.1 29.202 589 365 19 27 588 104 667 1.97e-57 206
Msa0638760 AT5G06530.4 29.779 497 317 13 46 518 1 489 4.18e-55 195
Msa0638760 AT1G15520.1 27.778 576 364 15 24 567 847 1402 5.79e-54 200
Msa0638760 AT1G15520.1 24.889 675 412 20 15 629 155 794 1.19e-40 160
Msa0638760 AT2G29940.1 29.026 534 339 12 24 539 848 1359 8.52e-53 196
Msa0638760 AT2G29940.1 25.280 625 400 17 19 593 165 772 2.08e-41 162
Msa0638760 AT3G25620.1 34.341 364 217 10 24 372 94 450 1.08e-52 188
Msa0638760 AT4G15230.3 30.018 563 339 20 9 545 806 1339 2.78e-52 195
Msa0638760 AT4G15230.3 25.235 638 421 16 17 612 144 767 1.58e-47 181
Msa0638760 AT4G15230.1 30.018 563 339 20 9 545 806 1339 2.78e-52 195
Msa0638760 AT4G15230.1 25.235 638 421 16 17 612 144 767 1.58e-47 181
Msa0638760 AT4G15230.4 30.018 563 339 20 9 545 727 1260 3.00e-52 194
Msa0638760 AT4G15230.4 25.235 638 421 16 17 612 65 688 1.24e-47 181
Msa0638760 AT3G16340.1 28.523 596 374 15 24 598 836 1400 3.34e-52 194
Msa0638760 AT3G16340.1 23.620 652 414 20 29 620 162 789 5.66e-37 148
Msa0638760 AT3G16340.2 28.523 596 374 15 24 598 831 1395 4.32e-52 194
Msa0638760 AT3G16340.2 23.737 653 407 22 29 620 162 784 9.05e-36 145
Msa0638760 AT4G15215.11 28.881 554 357 15 9 545 803 1336 1.50e-50 189
Msa0638760 AT4G15215.11 26.242 644 412 20 15 612 138 764 2.26e-45 174
Msa0638760 AT4G15215.1 28.881 554 357 15 9 545 796 1329 1.78e-50 189
Msa0638760 AT4G15215.1 25.972 643 408 19 15 612 138 757 1.16e-44 172
Msa0638760 AT4G15215.8 28.881 554 357 15 9 545 793 1326 2.20e-50 189
Msa0638760 AT4G15215.8 26.012 642 409 19 15 612 135 754 1.51e-44 171
Msa0638760 AT4G15215.10 28.881 554 357 15 9 545 793 1326 2.20e-50 189
Msa0638760 AT4G15215.10 26.012 642 409 19 15 612 135 754 1.51e-44 171
Msa0638760 AT4G15215.6 28.881 554 357 15 9 545 793 1326 2.20e-50 189
Msa0638760 AT4G15215.6 26.012 642 409 19 15 612 135 754 1.51e-44 171
Msa0638760 AT4G15215.7 28.881 554 357 15 9 545 793 1326 2.20e-50 189
Msa0638760 AT4G15215.7 26.012 642 409 19 15 612 135 754 1.51e-44 171
Msa0638760 AT4G15230.2 30.699 544 323 20 9 526 806 1321 2.40e-50 189
Msa0638760 AT4G15230.2 25.235 638 421 16 17 612 144 767 1.42e-47 181
Msa0638760 AT4G15215.9 28.881 554 357 15 9 545 800 1333 2.44e-50 189
Msa0638760 AT4G15215.9 26.242 644 412 20 15 612 135 761 4.41e-45 173
Msa0638760 AT4G15215.4 28.881 554 357 15 9 545 800 1333 2.44e-50 189
Msa0638760 AT4G15215.4 26.242 644 412 20 15 612 135 761 4.41e-45 173
Msa0638760 AT4G15215.5 28.881 554 357 15 9 545 800 1333 2.44e-50 189
Msa0638760 AT4G15215.5 26.242 644 412 20 15 612 135 761 4.41e-45 173
Msa0638760 AT4G15215.3 28.881 554 357 15 9 545 800 1333 2.44e-50 189
Msa0638760 AT4G15215.3 26.242 644 412 20 15 612 135 761 4.41e-45 173
Msa0638760 AT4G15215.2 28.881 554 357 15 9 545 800 1333 2.44e-50 189
Msa0638760 AT4G15215.2 26.242 644 412 20 15 612 135 761 4.41e-45 173
Msa0638760 AT4G15236.1 27.857 560 355 17 9 545 796 1329 2.67e-50 189
Msa0638760 AT4G15236.1 27.289 568 343 16 29 545 153 701 2.54e-46 177
Msa0638760 AT4G15233.3 28.114 562 351 18 9 545 736 1269 4.43e-50 188
Msa0638760 AT4G15233.3 25.382 654 415 17 19 619 83 716 4.79e-46 176
Msa0638760 AT4G15233.6 28.114 562 351 18 9 545 736 1269 4.43e-50 188
Msa0638760 AT4G15233.6 25.382 654 415 17 19 619 83 716 4.79e-46 176
Msa0638760 AT4G15233.1 28.114 562 351 18 9 545 798 1331 5.80e-50 188
Msa0638760 AT4G15233.1 25.382 654 415 17 19 619 145 778 5.30e-46 176
Msa0638760 AT4G15233.8 28.114 562 351 18 9 545 789 1322 6.16e-50 188
Msa0638760 AT4G15233.8 25.076 654 408 18 19 619 145 769 1.03e-41 163
Msa0638760 AT4G15233.7 28.114 562 351 18 9 545 780 1313 6.73e-50 187
Msa0638760 AT4G15233.7 25.786 636 417 17 19 619 145 760 5.97e-47 179
Msa0638760 AT1G15210.1 29.174 545 336 19 24 545 862 1379 6.93e-50 187
Msa0638760 AT1G15210.1 25.475 632 388 18 24 597 179 785 1.67e-37 150
Msa0638760 AT1G59870.1 28.545 543 330 19 24 539 889 1400 2.18e-48 183
Msa0638760 AT1G59870.1 24.057 636 393 17 24 597 181 788 5.13e-37 149
Msa0638760 AT4G15233.2 28.757 539 328 18 9 522 798 1305 2.99e-48 182
Msa0638760 AT4G15233.2 25.382 654 415 17 19 619 145 778 5.63e-46 176
Msa0638760 AT4G15233.5 26.667 555 365 13 19 545 83 623 6.14e-47 179
Msa0638760 AT4G15233.5 28.044 542 338 17 28 545 675 1188 2.14e-45 174
Msa0638760 AT4G15233.4 26.667 555 365 13 19 545 83 623 6.14e-47 179
Msa0638760 AT4G15233.4 28.044 542 338 17 28 545 675 1188 2.14e-45 174
Msa0638760 AT3G30842.1 28.371 571 343 17 24 567 843 1374 6.73e-47 179
Msa0638760 AT3G30842.1 25.703 498 311 15 19 467 151 638 1.30e-36 147
Msa0638760 AT3G53480.1 27.385 566 358 17 9 545 848 1389 7.69e-46 176
Msa0638760 AT3G53480.1 24.065 615 405 13 29 597 189 787 6.44e-41 160
Msa0638760 AT1G53390.1 38.866 247 144 4 25 268 519 761 9.58e-46 175
Msa0638760 AT2G37280.2 25.348 647 417 15 15 612 141 770 1.06e-45 175
Msa0638760 AT2G37280.2 27.829 539 341 13 9 522 811 1326 6.66e-44 169
Msa0638760 AT2G37280.1 25.348 647 417 15 15 612 141 770 1.27e-45 175
Msa0638760 AT2G37280.1 27.402 562 363 13 9 545 811 1352 2.52e-45 174
Msa0638760 AT2G37280.4 27.402 562 363 13 9 545 653 1194 2.61e-45 174
Msa0638760 AT2G37280.4 24.797 617 407 14 41 612 8 612 2.15e-41 162
Msa0638760 AT2G37280.3 27.402 562 363 13 9 545 840 1381 3.48e-45 173
Msa0638760 AT2G37280.3 24.408 676 416 16 15 612 141 799 6.19e-41 160
Msa0638760 AT2G37010.2 37.778 270 159 7 9 275 482 745 4.92e-45 173
Msa0638760 AT2G37010.1 37.778 270 159 7 9 275 482 745 4.92e-45 173
Msa0638760 AT1G15520.2 30.751 426 261 12 24 433 847 1254 6.18e-45 172
Msa0638760 AT1G15520.2 24.889 675 412 20 15 629 155 794 2.23e-40 159
Msa0638760 AT1G66950.1 28.090 534 342 16 25 539 876 1386 2.14e-43 168
Msa0638760 AT1G66950.1 23.957 647 417 21 11 599 166 795 7.85e-32 132
Msa0638760 AT2G36380.1 27.358 530 351 15 25 539 875 1385 9.16e-43 166
Msa0638760 AT2G36380.1 25.391 575 357 19 24 545 182 737 1.38e-35 144
Msa0638760 AT2G26910.1 28.705 533 342 18 24 539 840 1351 1.41e-42 166
Msa0638760 AT2G26910.1 26.156 627 399 15 20 597 140 751 2.72e-38 152
Msa0638760 AT5G60740.1 37.453 267 158 6 5 268 493 753 4.95e-39 154
Msa0638760 AT5G61700.2 28.372 215 130 7 8 213 592 791 1.77e-15 80.9
Msa0638760 AT5G61700.4 28.372 215 130 7 8 213 592 791 1.77e-15 80.9
Msa0638760 AT5G61700.1 27.049 244 152 8 8 242 592 818 2.05e-15 80.5
Msa0638760 AT3G47760.1 24.906 265 171 8 8 263 571 816 2.37e-15 80.5
Msa0638760 AT3G47760.3 24.906 265 171 8 8 263 611 856 2.78e-15 80.1
Msa0638760 AT3G47760.2 24.906 265 171 8 8 263 581 826 3.17e-15 80.1
Msa0638760 AT5G61740.3 29.016 193 117 7 3 187 441 621 4.49e-15 79.3
Msa0638760 AT5G61740.1 29.016 193 117 7 3 187 580 760 6.01e-15 79.0
Msa0638760 AT5G61740.2 28.191 188 116 6 8 187 550 726 7.30e-15 79.0
Msa0638760 AT1G27940.2 29.730 222 134 8 28 242 173 379 1.21e-14 78.2
Msa0638760 AT1G27940.2 29.412 221 134 7 29 242 807 1012 9.54e-11 65.9
Msa0638760 AT1G27940.1 29.730 222 134 8 28 242 387 593 1.29e-14 78.2
Msa0638760 AT1G27940.1 29.412 221 134 7 29 242 1021 1226 9.75e-11 65.9
Msa0638760 AT3G47780.1 26.033 242 153 7 10 242 612 836 2.42e-14 77.0
Msa0638760 AT1G28010.1 29.730 222 134 9 28 242 388 594 4.56e-14 76.6
Msa0638760 AT5G39040.1 30.472 233 134 10 28 251 412 625 7.13e-14 75.5
Msa0638760 AT3G47730.1 29.224 219 129 7 30 240 547 747 7.41e-14 75.5
Msa0638760 AT3G47750.1 27.907 172 107 5 22 187 628 788 1.33e-13 74.7
Msa0638760 AT3G47770.1 25.833 240 154 8 11 242 584 807 1.45e-13 74.7
Msa0638760 AT5G61690.2 28.641 206 125 6 41 240 559 748 1.90e-13 74.3
Msa0638760 AT3G47770.2 25.833 240 154 8 11 242 610 833 1.91e-13 74.3
Msa0638760 AT1G70610.2 30.476 210 131 6 38 242 300 499 2.14e-13 73.6
Msa0638760 AT1G70610.1 30.476 210 131 6 38 242 481 680 2.63e-13 73.6
Msa0638760 AT4G18050.1 30.180 222 137 9 29 245 372 580 5.30e-13 73.2
Msa0638760 AT4G18050.2 30.180 222 137 9 29 245 382 590 5.59e-13 72.8
Msa0638760 AT3G47790.2 27.807 187 114 6 10 187 466 640 6.45e-13 72.4
Msa0638760 AT3G28415.1 32.057 209 122 9 40 242 366 560 7.83e-13 72.4
Msa0638760 AT3G28415.1 29.665 209 127 6 40 241 1004 1199 6.46e-12 69.7
Msa0638760 AT3G28415.2 32.057 209 122 9 40 242 374 568 8.55e-13 72.4
Msa0638760 AT3G28415.2 29.665 209 127 6 40 241 1012 1207 7.12e-12 69.3
Msa0638760 AT3G47790.3 27.807 187 114 6 10 187 585 759 9.56e-13 72.0
Msa0638760 AT5G61730.1 30.144 209 118 8 41 240 550 739 1.04e-12 72.0
Msa0638760 AT5G61730.2 30.144 209 118 8 41 240 560 749 1.08e-12 72.0
Msa0638760 AT3G47790.1 27.807 187 114 6 10 187 585 759 1.15e-12 71.6
Msa0638760 AT1G02530.2 30.137 219 135 9 29 242 385 590 1.87e-12 71.2
Msa0638760 AT1G02530.1 30.137 219 135 9 29 242 385 590 2.32e-12 70.9
Msa0638760 AT3G47740.1 27.922 154 94 5 40 187 641 783 3.76e-12 70.1
Msa0638760 AT5G46540.1 30.769 208 126 9 40 242 385 579 4.38e-12 70.1
Msa0638760 AT3G28380.1 30.288 208 127 9 40 242 387 581 8.04e-12 69.3
Msa0638760 AT5G61690.1 27.670 206 126 6 41 240 559 747 1.00e-11 68.9
Msa0638760 AT4G01830.1 28.889 225 142 8 23 242 364 575 1.16e-11 68.6
Msa0638760 AT4G01830.2 28.889 225 142 8 23 242 130 341 1.20e-11 68.6
Msa0638760 AT2G47000.4 29.224 219 137 9 29 242 401 606 1.42e-11 68.6
Msa0638760 AT2G36910.1 30.317 221 132 7 29 242 385 590 1.74e-11 68.2
Msa0638760 AT2G47000.6 29.224 219 137 9 29 242 401 606 1.79e-11 68.2
Msa0638760 AT2G47000.5 29.224 219 137 9 29 242 401 606 1.79e-11 68.2
Msa0638760 AT2G47000.1 29.224 219 137 9 29 242 401 606 1.79e-11 68.2
Msa0638760 AT2G47000.3 29.224 219 137 9 29 242 401 606 1.93e-11 67.8
Msa0638760 AT2G47000.7 29.224 219 137 9 29 242 401 606 1.93e-11 67.8
Msa0638760 AT2G47000.2 29.224 219 137 9 29 242 401 606 2.07e-11 67.8
Msa0638760 AT4G25960.1 31.373 204 122 9 40 238 429 619 2.86e-11 67.4
Msa0638760 AT3G28390.1 28.910 211 130 6 38 241 1006 1203 3.05e-11 67.4
Msa0638760 AT3G28390.1 29.808 208 128 9 40 242 375 569 9.30e-11 65.9
Msa0638760 AT2G41700.2 28.351 194 122 5 14 201 1414 1596 3.42e-11 67.4
Msa0638760 AT1G02520.1 30.137 219 135 9 29 242 398 603 3.66e-11 67.0
Msa0638760 AT1G02520.2 30.137 219 135 9 29 242 398 603 3.66e-11 67.0
Msa0638760 AT1G02520.3 30.137 219 135 9 29 242 398 603 3.66e-11 67.0
Msa0638760 AT2G41700.1 28.351 194 122 5 14 201 1456 1638 4.32e-11 67.0
Msa0638760 AT3G62150.3 30.137 219 135 9 29 242 420 625 5.32e-11 66.6
Msa0638760 AT3G62150.2 30.137 219 135 9 29 242 420 625 5.32e-11 66.6
Msa0638760 AT3G62150.1 30.137 219 135 9 29 242 420 625 5.32e-11 66.6

Find 161 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATAGTGTGTTACCTTTC+TGG 0.139642 4_3:+34298003 Msa0638760:CDS
TACTGTGACATGGGAGAATT+TGG 0.160384 4_3:+34294625 Msa0638760:CDS
TTTAAACGAGAGAGATTAAA+TGG 0.193925 4_3:+34297898 Msa0638760:CDS
CAATTACAAATGGTTATTTA+TGG 0.224616 4_3:-34294545 None:intergenic
CTAATTCTGCATGGACTTAC+AGG 0.239056 4_3:+34294680 Msa0638760:CDS
TGACATGGGTGAGGGGAAAA+AGG 0.243793 4_3:+34294595 Msa0638760:exon
GACCTCTGTCTTCTTTCCTC+TGG 0.268813 4_3:+34295806 Msa0638760:CDS
AACTTTCTCTAGAACGAATA+TGG 0.274760 4_3:+34298521 Msa0638760:CDS
CTAATGATCTCTCTCATTTC+CGG 0.281253 4_3:+34297979 Msa0638760:CDS
GGATTGCAAGTTTAAGTCTA+AGG 0.284789 4_3:+34295714 Msa0638760:CDS
TTGGAAGCATCTCAATAAAA+AGG 0.297990 4_3:+34298738 Msa0638760:three_prime_UTR
GTGATCTTCCAAAGCCATTA+TGG 0.306387 4_3:+34298208 Msa0638760:CDS
TCTGCTATAGACATTGAGTT+TGG 0.330479 4_3:-34295479 None:intergenic
TCTATTCTTGGTCATCAATA+AGG 0.330870 4_3:+34298446 Msa0638760:CDS
TTCAAGTACTCGATCTATTC+AGG 0.339588 4_3:+34297087 Msa0638760:CDS
ACCTCTGTCTTCTTTCCTCT+GGG 0.341983 4_3:+34295807 Msa0638760:CDS
GTTGATCTTGTTATCATGTT+TGG 0.347917 4_3:+34298402 Msa0638760:CDS
CCCACATCATAATGGCAAAT+AGG 0.348770 4_3:-34298068 None:intergenic
TTTGAAGGCTTAACATTTGT+TGG 0.349763 4_3:+34298294 Msa0638760:CDS
TTGTGTTAATAGCATCTTGC+AGG 0.351067 4_3:-34295541 None:intergenic
ACCCATGTCAGTGAACTAAT+TGG 0.353509 4_3:-34294582 None:intergenic
ATCCACACTCCTTGATGCTT+TGG 0.362422 4_3:+34294757 Msa0638760:CDS
TGTTTATCGAGTTCTATTCT+TGG 0.375128 4_3:+34298434 Msa0638760:CDS
AGACATCACACTCACAGAAA+TGG 0.377758 4_3:+34295517 Msa0638760:CDS
ATTTGAGTGCGATAAGGAAT+AGG 0.378122 4_3:+34296915 Msa0638760:CDS
TTGGCAGTAATGGGTCCTTC+AGG 0.380064 4_3:+34294725 Msa0638760:CDS
TTGGAGGCCATTGTTACAAA+TGG 0.385504 4_3:+34294644 Msa0638760:CDS
GAGATGTACTAACTGATATA+TGG 0.393658 4_3:+34298352 Msa0638760:CDS
TACCTTCATTTCCTCAATCA+AGG 0.397024 4_3:-34297478 None:intergenic
TGCTCAGCCAGGGAAGCTTT+TGG 0.400621 4_3:+34294706 Msa0638760:CDS
TGAGAGCCTTATGATGGTTG+TGG 0.401892 4_3:+34298092 Msa0638760:CDS
ATCTCTACCACTAACGGTTA+TGG 0.403133 4_3:-34298334 None:intergenic
TCAAGCTTGGGCAGCTGTGC+AGG 0.403644 4_3:-34298861 None:intergenic
ATTCATTCTTGAATGATCCT+TGG 0.404374 4_3:-34298272 None:intergenic
TCCTTCATTAACTTAGAACT+TGG 0.406743 4_3:-34298695 None:intergenic
AGTGCTATATTAAATTTGTA+AGG 0.411404 4_3:+34298654 Msa0638760:three_prime_UTR
AAATCAAACATACAGCAATC+AGG 0.412527 4_3:+34295209 Msa0638760:CDS
AGAGAGATCATTAGCATGTA+TGG 0.414309 4_3:-34297970 None:intergenic
CCCAAGTTCTAAGTTAATGA+AGG 0.414331 4_3:+34298694 Msa0638760:three_prime_UTR
AACACAAGGGTTGGAGGGTA+TGG 0.417133 4_3:+34295557 Msa0638760:CDS
GGGTACTTCCATAATGGCTT+TGG 0.417792 4_3:-34298216 None:intergenic
CAGGACACTGAAGAATGCTT+TGG 0.418396 4_3:+34296356 Msa0638760:intron
ATCCTTCTGATCACTACTTA+AGG 0.418957 4_3:+34295986 Msa0638760:CDS
GAGGAAGGAAATGTAGTAGC+AGG 0.419423 4_3:-34298238 None:intergenic
TTATGATTGTTATCATCATC+AGG 0.425332 4_3:+34298806 Msa0638760:three_prime_UTR
ATCATTGCTGGTGGAGTTGA+AGG 0.429756 4_3:+34298147 Msa0638760:CDS
TGATATATGGCATGTGCAAA+TGG 0.436618 4_3:+34298365 Msa0638760:CDS
TGATATCACGATACAATTGT+TGG 0.437155 4_3:-34296991 None:intergenic
GACATCACACTCACAGAAAT+GGG 0.438149 4_3:+34295518 Msa0638760:CDS
CAGAAGGATTATAGTGAGTT+GGG 0.438626 4_3:-34295972 None:intergenic
TCCTATTTGCCATTATGATG+TGG 0.439662 4_3:+34298067 Msa0638760:CDS
TTGAAGGCTTAACATTTGTT+GGG 0.442204 4_3:+34298295 Msa0638760:CDS
TGCAAATGGGTCACTCTAAG+TGG 0.444771 4_3:+34298379 Msa0638760:CDS
ATCGTGATATCAGCAATTAC+TGG 0.444969 4_3:+34297002 Msa0638760:CDS
TTGACTTTCATGACACTTGT+TGG 0.446576 4_3:+34297444 Msa0638760:CDS
GCTCTCAACCCACATCATAA+TGG 0.451840 4_3:-34298076 None:intergenic
TACAGCTTCTGAAGCAGATC+AGG 0.452785 4_3:+34295847 Msa0638760:CDS
TTCCTCACTTATGCTTTCCA+AGG 0.454140 4_3:+34298255 Msa0638760:CDS
ACTTTCATGACACTTGTTGG+TGG 0.454974 4_3:+34297447 Msa0638760:CDS
TCTGGGGAGACAGTATATTT+CGG 0.462580 4_3:+34295824 Msa0638760:CDS
TTCACTACTAGGCTGATGTA+TGG 0.465615 4_3:-34295765 None:intergenic
TCAGGGAAAATTCTAATCAA+TGG 0.469117 4_3:+34295227 Msa0638760:CDS
ACCATGCACTGAGTCAGAAA+TGG 0.469567 4_3:-34296950 None:intergenic
TGGATTCTCTCCCTTGATTG+AGG 0.470767 4_3:+34297467 Msa0638760:CDS
ATGGTTCTAAAGGCCTAAGC+GGG 0.471852 4_3:+34295576 Msa0638760:CDS
CATCTTACATCAATTACAAA+TGG 0.473712 4_3:-34294555 None:intergenic
GAGAGCCTTATGATGGTTGT+GGG 0.475668 4_3:+34298093 Msa0638760:CDS
ATTCTTTCCATTTGTAACAA+TGG 0.478367 4_3:-34294651 None:intergenic
AATCCTGCTCATAACATAGT+AGG 0.482082 4_3:-34295696 None:intergenic
GAGAGATTAAATGGGCACTA+TGG 0.484531 4_3:+34297907 Msa0638760:CDS
TCATCAAGGAAAAGAAGTCT+AGG 0.486775 4_3:-34295644 None:intergenic
ATTGCCATTGCTATAAGCCT+AGG 0.489154 4_3:+34297043 Msa0638760:CDS
GTAATTACTGAAGACGCAAT+TGG 0.490395 4_3:+34296386 Msa0638760:CDS
GGATTATAGTGAGTTGGGCA+AGG 0.491441 4_3:-34295967 None:intergenic
TCCCTTGATTGAGGAAATGA+AGG 0.491472 4_3:+34297476 Msa0638760:CDS
CCTTCATTAACTTAGAACTT+GGG 0.492590 4_3:-34298694 None:intergenic
CCTATTTGCCATTATGATGT+GGG 0.494615 4_3:+34298068 Msa0638760:CDS
TCTAGGATTTGAGTGCGATA+AGG 0.498082 4_3:+34296909 Msa0638760:intron
ACATTTGTTGGGTATCAAGA+AGG 0.499577 4_3:+34298306 Msa0638760:CDS
GATATCACGATACAATTGTT+GGG 0.502951 4_3:-34296990 None:intergenic
CACCAATTAGTTCACTGACA+TGG 0.504226 4_3:+34294580 Msa0638760:exon
TCAGAAGGATTATAGTGAGT+TGG 0.510042 4_3:-34295973 None:intergenic
ACACTCCTTGATGCTTTGGC+AGG 0.511535 4_3:+34294761 Msa0638760:CDS
TGTCTATAGCAGAGAAGAAG+AGG 0.512788 4_3:+34295489 Msa0638760:CDS
AGGAAGGAAATGTAGTAGCA+GGG 0.513706 4_3:-34298237 None:intergenic
CTTCCTACTATGTTATGAGC+AGG 0.514563 4_3:+34295693 Msa0638760:CDS
AAGGTAACACACTATTGATC+CGG 0.515676 4_3:-34297998 None:intergenic
GGAGGTACCATAACCGTTAG+TGG 0.517779 4_3:+34298327 Msa0638760:CDS
TCATTCAAGAATGAATTTGA+AGG 0.518212 4_3:+34298279 Msa0638760:CDS
ACCTTCATTTCCTCAATCAA+GGG 0.521308 4_3:-34297477 None:intergenic
ATTCTTTATAAGAATTTACA+AGG 0.523139 4_3:-34296412 None:intergenic
TCCATTTCTGACTCAGTGCA+TGG 0.524389 4_3:+34296949 Msa0638760:CDS
ATTACTGCCAAAAGCTTCCC+TGG 0.526846 4_3:-34294713 None:intergenic
TAGCAGGGGTACTTCCATAA+TGG 0.528581 4_3:-34298222 None:intergenic
CGATTTACGCTAGAAACAGT+AGG 0.528825 4_3:-34298486 None:intergenic
GCTATTAACACAAGGGTTGG+AGG 0.529002 4_3:+34295551 Msa0638760:CDS
CTTACAGGTTATGCTCAGCC+AGG 0.532620 4_3:+34294695 Msa0638760:CDS
TACTCCCCACAACCATCATA+AGG 0.534395 4_3:-34298098 None:intergenic
GATGCTATTAACACAAGGGT+TGG 0.539974 4_3:+34295548 Msa0638760:CDS
GTGGGTTGAGAGCCTTATGA+TGG 0.544458 4_3:+34298086 Msa0638760:CDS
TTCCTTGATGAACCAACTAG+TGG 0.547630 4_3:+34295656 Msa0638760:CDS
ACCAATTAGTTCACTGACAT+GGG 0.547798 4_3:+34294581 Msa0638760:exon
GTCCACTAGTTGGTTCATCA+AGG 0.550681 4_3:-34295658 None:intergenic
TTATACTTGTACTTTGAGTG+TGG 0.550685 4_3:+34298607 Msa0638760:three_prime_UTR
ATCCTTAAGTAGTGATCAGA+AGG 0.551427 4_3:-34295988 None:intergenic
TAGTTCACTGACATGGGTGA+GGG 0.552899 4_3:+34294587 Msa0638760:exon
ACTGAAGAATGCTTTGGTAA+AGG 0.553304 4_3:+34296362 Msa0638760:CDS
GCACTATCAAGTCCACTAGT+TGG 0.553890 4_3:-34295668 None:intergenic
TGTGACATGGGAGAATTTGG+AGG 0.558884 4_3:+34294628 Msa0638760:CDS
GTCCTTTGTGTAGTCCAGAA+AGG 0.558968 4_3:-34298017 None:intergenic
ATCGAGTACTTGAACCGACT+TGG 0.560154 4_3:-34297078 None:intergenic
GTAATGGGTCCTTCAGGCTG+TGG 0.560913 4_3:+34294731 Msa0638760:CDS
GTTGGAGGGTATGGTTCTAA+AGG 0.565710 4_3:+34295566 Msa0638760:CDS
GGGTGGAATTACTGTGACAT+GGG 0.569018 4_3:+34294616 Msa0638760:CDS
TTGGAAAGCATAAGTGAGGA+AGG 0.570453 4_3:-34298253 None:intergenic
TTAAACGAGAGAGATTAAAT+GGG 0.570517 4_3:+34297899 Msa0638760:CDS
TTAGTTCACTGACATGGGTG+AGG 0.572179 4_3:+34294586 Msa0638760:exon
AATCAAACATACAGCAATCA+GGG 0.572311 4_3:+34295210 Msa0638760:CDS
AATAGAAAACTAATTCTGCA+TGG 0.572344 4_3:+34294671 Msa0638760:CDS
AATGGCTTTGGAAGATCACT+AGG 0.572422 4_3:-34298204 None:intergenic
GGCTCTATCTTCTACCAAGT+CGG 0.577300 4_3:+34297064 Msa0638760:CDS
GATTGCAAGTTTAAGTCTAA+GGG 0.580051 4_3:+34295715 Msa0638760:CDS
GATATATGGCATGTGCAAAT+GGG 0.581117 4_3:+34298366 Msa0638760:CDS
ATGCTGTCAACTTTAACAGC+TGG 0.583631 4_3:+34295422 Msa0638760:CDS
TATACTTGTACTTTGAGTGT+GGG 0.586649 4_3:+34298608 Msa0638760:three_prime_UTR
CATCAAGGAAAAGAAGTCTA+GGG 0.589526 4_3:-34295643 None:intergenic
GATTTACGCTAGAAACAGTA+GGG 0.589804 4_3:-34298485 None:intergenic
GATTATAGTGAGTTGGGCAA+GGG 0.590963 4_3:-34295966 None:intergenic
TAATACCTGCCAAAGCATCA+AGG 0.592548 4_3:-34294766 None:intergenic
GTCTAAGGGATGATATTCAA+AGG 0.598244 4_3:+34295729 Msa0638760:CDS
CTTGGTCATCAATAAGGTCA+AGG 0.598347 4_3:+34298452 Msa0638760:CDS
CATGGCATGCTTCAGGTCAG+AGG 0.605327 4_3:+34297393 Msa0638760:intron
CTATTAACACAAGGGTTGGA+GGG 0.606001 4_3:+34295552 Msa0638760:CDS
AAATTCAGATCTATATACGT+TGG 0.608775 4_3:+34298719 Msa0638760:three_prime_UTR
AGAGCCTAGGCTTATAGCAA+TGG 0.611366 4_3:-34297047 None:intergenic
GTGGATTTGCCACAGCCTGA+AGG 0.614336 4_3:-34294740 None:intergenic
TGAGTGCGATAAGGAATAGG+AGG 0.615518 4_3:+34296918 Msa0638760:CDS
CTTGGTAGAAGATAGAGCCT+AGG 0.616154 4_3:-34297060 None:intergenic
TGCAAGATGCTATTAACACA+AGG 0.616195 4_3:+34295543 Msa0638760:CDS
TAGTACATCTCTACCACTAA+CGG 0.620146 4_3:-34298340 None:intergenic
AGTTCACTGACATGGGTGAG+GGG 0.622129 4_3:+34294588 Msa0638760:exon
CTGAGTCAGAAATGGAGCGT+GGG 0.622217 4_3:-34296942 None:intergenic
TGCCAAAGCATCAAGGAGTG+TGG 0.623323 4_3:-34294759 None:intergenic
CCTCTGTCTTCTTTCCTCTG+GGG 0.623592 4_3:+34295808 Msa0638760:CDS
ATCCTTGGAAAGCATAAGTG+AGG 0.624505 4_3:-34298257 None:intergenic
GGTTCTAAAGGCCTAAGCGG+GGG 0.625585 4_3:+34295578 Msa0638760:CDS
GTTCTAAAGGCCTAAGCGGG+GGG 0.627360 4_3:+34295579 Msa0638760:CDS
AGGGTGGAATTACTGTGACA+TGG 0.633622 4_3:+34294615 Msa0638760:CDS
TACCTTTCTGGACTACACAA+AGG 0.636843 4_3:+34298015 Msa0638760:CDS
TTTGTTGGGTATCAAGAAGG+AGG 0.648302 4_3:+34298309 Msa0638760:CDS
TTACAGGTTATGCTCAGCCA+GGG 0.649963 4_3:+34294696 Msa0638760:CDS
ACTGAGTCAGAAATGGAGCG+TGG 0.650831 4_3:-34296943 None:intergenic
AGAGCCTTATGATGGTTGTG+GGG 0.657224 4_3:+34298094 Msa0638760:CDS
TGGTTCTAAAGGCCTAAGCG+GGG 0.661255 4_3:+34295577 Msa0638760:CDS
GGAAGGAAATGTAGTAGCAG+GGG 0.661436 4_3:-34298236 None:intergenic
TATGGTTCTAAAGGCCTAAG+CGG 0.666231 4_3:+34295575 Msa0638760:CDS
GCAAATGGGTCACTCTAAGT+GGG 0.683822 4_3:+34298380 Msa0638760:CDS
ATCACGATACAATTGTTGGG+AGG 0.685651 4_3:-34296987 None:intergenic
GCAAGATGCTATTAACACAA+GGG 0.711792 4_3:+34295544 Msa0638760:CDS
CCCCAGAGGAAAGAAGACAG+AGG 0.713714 4_3:-34295808 None:intergenic
GAAATATACTGTCTCCCCAG+AGG 0.722454 4_3:-34295822 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGTATTATTATAACTACA+AGG + chr4_3:34294880-34294899 Msa0638760:intron 15.0%
!!! AATACTTTGTTTCATATTTT+AGG - chr4_3:34295315-34295334 None:intergenic 15.0%
!! CTTTCAAATAAACATTATTT+AGG - chr4_3:34296056-34296075 None:intergenic 15.0%
!! ATTCTTTATAAGAATTTACA+AGG - chr4_3:34296415-34296434 None:intergenic 15.0%
!!! TTTAACACAATTATTTTTAC+AGG - chr4_3:34297300-34297319 None:intergenic 15.0%
!! AAGTATAAATAGAGTAAATT+AGG + chr4_3:34297603-34297622 Msa0638760:intron 15.0%
!! CAATTACAAATGGTTATTTA+TGG - chr4_3:34294548-34294567 None:intergenic 20.0%
!! ATTCCAAATATCATTGAAAT+TGG - chr4_3:34294974-34294993 None:intergenic 20.0%
!!! TTTCAATGATATTTGGAATT+TGG + chr4_3:34294975-34294994 Msa0638760:intron 20.0%
!! TAATGTTTATTTGAAAGCTT+TGG + chr4_3:34296059-34296078 Msa0638760:intron 20.0%
!! AATGTTTATTTGAAAGCTTT+GGG + chr4_3:34296060-34296079 Msa0638760:intron 20.0%
!!! GAGATGAATTTTAATTTTTC+TGG - chr4_3:34296147-34296166 None:intergenic 20.0%
!!! TCCATCTCTAATTTTTTTAA+AGG - chr4_3:34296184-34296203 None:intergenic 20.0%
!!! TTTTAAGAACTGAAACATAA+TGG + chr4_3:34296315-34296334 Msa0638760:intron 20.0%
!! GGAAAACAAATATAATATGA+AGG + chr4_3:34296729-34296748 Msa0638760:intron 20.0%
!! TTAAATCATATGGTTAATGT+TGG - chr4_3:34296864-34296883 None:intergenic 20.0%
!! AAGCAAAATGTTAAATCATA+TGG - chr4_3:34296874-34296893 None:intergenic 20.0%
!! TATTCAGGTAAAATACAAAA+TGG + chr4_3:34297102-34297121 Msa0638760:intron 20.0%
!! GTTCAAATTTATAAATCACT+GGG - chr4_3:34297355-34297374 None:intergenic 20.0%
!! CAGTGATTTATAAATTTGAA+CGG + chr4_3:34297354-34297373 Msa0638760:intron 20.0%
!! AAGTAAGTATTATCAACAAT+TGG - chr4_3:34297695-34297714 None:intergenic 20.0%
!!! AGTGAGTTAATCAATTTTTT+TGG + chr4_3:34297725-34297744 Msa0638760:intron 20.0%
!! AAATTATAATAACCAAAGGA+GGG - chr4_3:34297808-34297827 None:intergenic 20.0%
!! AAAATTATAATAACCAAAGG+AGG - chr4_3:34297809-34297828 None:intergenic 20.0%
!!! TCCTTTGGTTATTATAATTT+TGG + chr4_3:34297808-34297827 Msa0638760:intron 20.0%
!!! CCTTTGGTTATTATAATTTT+GGG + chr4_3:34297809-34297828 Msa0638760:intron 20.0%
!! AGTGCTATATTAAATTTGTA+AGG + chr4_3:34298654-34298673 Msa0638760:three_prime_UTR 20.0%
! CATCTTACATCAATTACAAA+TGG - chr4_3:34294558-34294577 None:intergenic 25.0%
! ATTCTTTCCATTTGTAACAA+TGG - chr4_3:34294654-34294673 None:intergenic 25.0%
! AATAGAAAACTAATTCTGCA+TGG + chr4_3:34294671-34294690 Msa0638760:CDS 25.0%
! AGACCAATTTCAATGATATT+TGG + chr4_3:34294968-34294987 Msa0638760:intron 25.0%
! AGATATATGTAACTCTGTTT+GGG - chr4_3:34295085-34295104 None:intergenic 25.0%
! AAGATATATGTAACTCTGTT+TGG - chr4_3:34295086-34295105 None:intergenic 25.0%
!! CTAATTTAGCTTCAAGAAAA+AGG - chr4_3:34295109-34295128 None:intergenic 25.0%
!!! TATAACTTGTTAGCTATGAT+TGG + chr4_3:34295132-34295151 Msa0638760:intron 25.0%
! ACTTGAAATCAATATGTACA+AGG - chr4_3:34295887-34295906 None:intergenic 25.0%
!!! TGTACATATTGATTTCAAGT+TGG + chr4_3:34295887-34295906 Msa0638760:intron 25.0%
!! CATAAACAATGATTTTGAAC+AGG + chr4_3:34296011-34296030 Msa0638760:CDS 25.0%
! ATAAACATTATTTAGGCTCA+GGG - chr4_3:34296049-34296068 None:intergenic 25.0%
! AATAAACATTATTTAGGCTC+AGG - chr4_3:34296050-34296069 None:intergenic 25.0%
!!! TCTCTAATTTTTTTAAAGGC+TGG - chr4_3:34296180-34296199 None:intergenic 25.0%
!! GCCTTTAAAAAAATTAGAGA+TGG + chr4_3:34296180-34296199 Msa0638760:intron 25.0%
! TTCTAGTCTAAGTCTAATTT+AGG - chr4_3:34296507-34296526 None:intergenic 25.0%
!!! TGGATTTTTGAAAGATTTTC+AGG - chr4_3:34296611-34296630 None:intergenic 25.0%
! TCATCGTTAGAATTTCAAAA+TGG + chr4_3:34296786-34296805 Msa0638760:intron 25.0%
!!! AGAAGGTATTTCAAATGATA+AGG - chr4_3:34297224-34297243 None:intergenic 25.0%
! TCTATATGAAAATTAGCAGA+AGG - chr4_3:34297241-34297260 None:intergenic 25.0%
! CGTTCAAATTTATAAATCAC+TGG - chr4_3:34297356-34297375 None:intergenic 25.0%
!!! AGTCAAGTTCTTTTAGAATT+TGG - chr4_3:34297566-34297585 None:intergenic 25.0%
!! TTGACTCATCTAAAGTAAAA+AGG + chr4_3:34297580-34297599 Msa0638760:intron 25.0%
! CCCAAAATTATAATAACCAA+AGG - chr4_3:34297812-34297831 None:intergenic 25.0%
! TCTCGTTTAAATACCTAATA+TGG - chr4_3:34297889-34297908 None:intergenic 25.0%
! TTTAAACGAGAGAGATTAAA+TGG + chr4_3:34297898-34297917 Msa0638760:CDS 25.0%
! TTAAACGAGAGAGATTAAAT+GGG + chr4_3:34297899-34297918 Msa0638760:CDS 25.0%
! TCATTCAAGAATGAATTTGA+AGG + chr4_3:34298279-34298298 Msa0638760:CDS 25.0%
! AAATTCAGATCTATATACGT+TGG + chr4_3:34298719-34298738 Msa0638760:three_prime_UTR 25.0%
! TTATGATTGTTATCATCATC+AGG + chr4_3:34298806-34298825 Msa0638760:three_prime_UTR 25.0%
AAATCAAACATACAGCAATC+AGG + chr4_3:34295209-34295228 Msa0638760:CDS 30.0%
AATCAAACATACAGCAATCA+GGG + chr4_3:34295210-34295229 Msa0638760:CDS 30.0%
TCAGGGAAAATTCTAATCAA+TGG + chr4_3:34295227-34295246 Msa0638760:CDS 30.0%
GATTGCAAGTTTAAGTCTAA+GGG + chr4_3:34295715-34295734 Msa0638760:CDS 30.0%
AGTTGAAAAACTTCACTACT+AGG - chr4_3:34295779-34295798 None:intergenic 30.0%
!!! TTGCAGTTTTTTGCTTCAAA+TGG + chr4_3:34295940-34295959 Msa0638760:intron 30.0%
!!! GATTCGTCTAATTTGTTTTC+AGG + chr4_3:34296337-34296356 Msa0638760:intron 30.0%
! ACTTTTCAAATCCAACAATG+AGG + chr4_3:34296545-34296564 Msa0638760:intron 30.0%
! CTTTTCAAATCCAACAATGA+GGG + chr4_3:34296546-34296565 Msa0638760:intron 30.0%
CTAGAGATTACTTTGATTGA+TGG + chr4_3:34296583-34296602 Msa0638760:intron 30.0%
!! TGTCGGTTTGATAAATACAA+GGG + chr4_3:34296708-34296727 Msa0638760:intron 30.0%
!! TATGGTTAATGTTGGTTCAA+TGG - chr4_3:34296856-34296875 None:intergenic 30.0%
TTCGTGAAATTGTATGTTCT+AGG + chr4_3:34296892-34296911 Msa0638760:intron 30.0%
GATATCACGATACAATTGTT+GGG - chr4_3:34296993-34297012 None:intergenic 30.0%
TGATATCACGATACAATTGT+TGG - chr4_3:34296994-34297013 None:intergenic 30.0%
! TTACAGGTTGAAATTGACAT+TGG - chr4_3:34297284-34297303 None:intergenic 30.0%
! AAATACCTAATATGGTGGAA+GGG - chr4_3:34297881-34297900 None:intergenic 30.0%
! TAAATACCTAATATGGTGGA+AGG - chr4_3:34297882-34297901 None:intergenic 30.0%
CGTTTAAATACCTAATATGG+TGG - chr4_3:34297886-34297905 None:intergenic 30.0%
! TATCTTCCCAAATTTTGTGA+TGG + chr4_3:34298119-34298138 Msa0638760:CDS 30.0%
! ATCTTCCCAAATTTTGTGAT+GGG + chr4_3:34298120-34298139 Msa0638760:CDS 30.0%
ATTCATTCTTGAATGATCCT+TGG - chr4_3:34298275-34298294 None:intergenic 30.0%
TTTGAAGGCTTAACATTTGT+TGG + chr4_3:34298294-34298313 Msa0638760:CDS 30.0%
TTGAAGGCTTAACATTTGTT+GGG + chr4_3:34298295-34298314 Msa0638760:CDS 30.0%
GAGATGTACTAACTGATATA+TGG + chr4_3:34298352-34298371 Msa0638760:CDS 30.0%
! GTTGATCTTGTTATCATGTT+TGG + chr4_3:34298402-34298421 Msa0638760:CDS 30.0%
TGTTTATCGAGTTCTATTCT+TGG + chr4_3:34298434-34298453 Msa0638760:CDS 30.0%
TCTATTCTTGGTCATCAATA+AGG + chr4_3:34298446-34298465 Msa0638760:CDS 30.0%
! TCTAGAGAAAGTTTTTGCTT+GGG - chr4_3:34298514-34298533 None:intergenic 30.0%
!! TTCTAGAGAAAGTTTTTGCT+TGG - chr4_3:34298515-34298534 None:intergenic 30.0%
!! AACTTTCTCTAGAACGAATA+TGG + chr4_3:34298521-34298540 Msa0638760:CDS 30.0%
TTATACTTGTACTTTGAGTG+TGG + chr4_3:34298607-34298626 Msa0638760:three_prime_UTR 30.0%
TATACTTGTACTTTGAGTGT+GGG + chr4_3:34298608-34298627 Msa0638760:three_prime_UTR 30.0%
CCTTCATTAACTTAGAACTT+GGG - chr4_3:34298697-34298716 None:intergenic 30.0%
TCCTTCATTAACTTAGAACT+TGG - chr4_3:34298698-34298717 None:intergenic 30.0%
!! TTGGAAGCATCTCAATAAAA+AGG + chr4_3:34298738-34298757 Msa0638760:three_prime_UTR 30.0%
ACCAATTAGTTCACTGACAT+GGG + chr4_3:34294581-34294600 Msa0638760:exon 35.0%
CAATTCTCAAACAGAGTTCA+AGG - chr4_3:34294939-34294958 None:intergenic 35.0%
AGGTTATATGCGACAGAAAA+AGG + chr4_3:34295032-34295051 Msa0638760:intron 35.0%
!! AAAAAACAAGCACTGGCTTA+TGG + chr4_3:34295251-34295270 Msa0638760:CDS 35.0%
! TTAGGACTTGTGTAGTTTTC+AGG - chr4_3:34295297-34295316 None:intergenic 35.0%
TGAATTTACATTGAGCATGG+TGG - chr4_3:34295377-34295396 None:intergenic 35.0%
ACCATGCTCAATGTAAATTC+AGG + chr4_3:34295376-34295395 Msa0638760:intron 35.0%
CCATGCTCAATGTAAATTCA+GGG + chr4_3:34295377-34295396 Msa0638760:intron 35.0%
TCTGCTATAGACATTGAGTT+TGG - chr4_3:34295482-34295501 None:intergenic 35.0%
TTGTGTTAATAGCATCTTGC+AGG - chr4_3:34295544-34295563 None:intergenic 35.0%
TGCAAGATGCTATTAACACA+AGG + chr4_3:34295543-34295562 Msa0638760:CDS 35.0%
GCAAGATGCTATTAACACAA+GGG + chr4_3:34295544-34295563 Msa0638760:CDS 35.0%
CATCAAGGAAAAGAAGTCTA+GGG - chr4_3:34295646-34295665 None:intergenic 35.0%
TCATCAAGGAAAAGAAGTCT+AGG - chr4_3:34295647-34295666 None:intergenic 35.0%
AATCCTGCTCATAACATAGT+AGG - chr4_3:34295699-34295718 None:intergenic 35.0%
GGATTGCAAGTTTAAGTCTA+AGG + chr4_3:34295714-34295733 Msa0638760:CDS 35.0%
GTCTAAGGGATGATATTCAA+AGG + chr4_3:34295729-34295748 Msa0638760:CDS 35.0%
CAGAAGGATTATAGTGAGTT+GGG - chr4_3:34295975-34295994 None:intergenic 35.0%
TCAGAAGGATTATAGTGAGT+TGG - chr4_3:34295976-34295995 None:intergenic 35.0%
ATCCTTCTGATCACTACTTA+AGG + chr4_3:34295986-34296005 Msa0638760:CDS 35.0%
ATCCTTAAGTAGTGATCAGA+AGG - chr4_3:34295991-34296010 None:intergenic 35.0%
ACTGAAGAATGCTTTGGTAA+AGG + chr4_3:34296362-34296381 Msa0638760:CDS 35.0%
GTAATTACTGAAGACGCAAT+TGG + chr4_3:34296386-34296405 Msa0638760:CDS 35.0%
! AAGATGACGTTTTTCGTTGT+TGG - chr4_3:34296631-34296650 None:intergenic 35.0%
!! GTGTCGGTTTGATAAATACA+AGG + chr4_3:34296707-34296726 Msa0638760:intron 35.0%
ATTTGAGTGCGATAAGGAAT+AGG + chr4_3:34296915-34296934 Msa0638760:CDS 35.0%
ATCGTGATATCAGCAATTAC+TGG + chr4_3:34297002-34297021 Msa0638760:CDS 35.0%
TTCAAGTACTCGATCTATTC+AGG + chr4_3:34297087-34297106 Msa0638760:CDS 35.0%
GGTAACAGTATCATTGTACA+TGG + chr4_3:34297375-34297394 Msa0638760:intron 35.0%
TTGACTTTCATGACACTTGT+TGG + chr4_3:34297444-34297463 Msa0638760:CDS 35.0%
ACCTTCATTTCCTCAATCAA+GGG - chr4_3:34297480-34297499 None:intergenic 35.0%
TACCTTCATTTCCTCAATCA+AGG - chr4_3:34297481-34297500 None:intergenic 35.0%
GAAAAAAAAATGCCCTCCTT+TGG + chr4_3:34297793-34297812 Msa0638760:intron 35.0%
!! GGTATTACTGCTTTTCTGAT+TGG + chr4_3:34297928-34297947 Msa0638760:CDS 35.0%
AGAGAGATCATTAGCATGTA+TGG - chr4_3:34297973-34297992 None:intergenic 35.0%
CTAATGATCTCTCTCATTTC+CGG + chr4_3:34297979-34297998 Msa0638760:CDS 35.0%
AAGGTAACACACTATTGATC+CGG - chr4_3:34298001-34298020 None:intergenic 35.0%
TCAATAGTGTGTTACCTTTC+TGG + chr4_3:34298003-34298022 Msa0638760:CDS 35.0%
TCCTATTTGCCATTATGATG+TGG + chr4_3:34298067-34298086 Msa0638760:CDS 35.0%
CCTATTTGCCATTATGATGT+GGG + chr4_3:34298068-34298087 Msa0638760:CDS 35.0%
! TCTTCCCAAATTTTGTGATG+GGG + chr4_3:34298121-34298140 Msa0638760:CDS 35.0%
! ACATTTGTTGGGTATCAAGA+AGG + chr4_3:34298306-34298325 Msa0638760:CDS 35.0%
TAGTACATCTCTACCACTAA+CGG - chr4_3:34298343-34298362 None:intergenic 35.0%
TGATATATGGCATGTGCAAA+TGG + chr4_3:34298365-34298384 Msa0638760:CDS 35.0%
GATATATGGCATGTGCAAAT+GGG + chr4_3:34298366-34298385 Msa0638760:CDS 35.0%
GATTTACGCTAGAAACAGTA+GGG - chr4_3:34298488-34298507 None:intergenic 35.0%
! CTAGAGAAAGTTTTTGCTTG+GGG - chr4_3:34298513-34298532 None:intergenic 35.0%
!! CCCAAGTTCTAAGTTAATGA+AGG + chr4_3:34298694-34298713 Msa0638760:three_prime_UTR 35.0%
CACCAATTAGTTCACTGACA+TGG + chr4_3:34294580-34294599 Msa0638760:exon 40.0%
ACCCATGTCAGTGAACTAAT+TGG - chr4_3:34294585-34294604 None:intergenic 40.0%
TACTGTGACATGGGAGAATT+TGG + chr4_3:34294625-34294644 Msa0638760:CDS 40.0%
TTGGAGGCCATTGTTACAAA+TGG + chr4_3:34294644-34294663 Msa0638760:CDS 40.0%
CTAATTCTGCATGGACTTAC+AGG + chr4_3:34294680-34294699 Msa0638760:CDS 40.0%
! TAATACCTGCCAAAGCATCA+AGG - chr4_3:34294769-34294788 None:intergenic 40.0%
GCTATGAGACTCAAACTTAG+TGG - chr4_3:34294829-34294848 None:intergenic 40.0%
AGTCAAATTACTCCAGAGTG+AGG + chr4_3:34295012-34295031 Msa0638760:intron 40.0%
TATGATTCGAGCAATGTTGC+AGG + chr4_3:34295179-34295198 Msa0638760:intron 40.0%
CAATGGCAAAAAACAAGCAC+TGG + chr4_3:34295244-34295263 Msa0638760:CDS 40.0%
CCCTGAATTTACATTGAGCA+TGG - chr4_3:34295380-34295399 None:intergenic 40.0%
ATGCTGTCAACTTTAACAGC+TGG + chr4_3:34295422-34295441 Msa0638760:CDS 40.0%
TGTCTATAGCAGAGAAGAAG+AGG + chr4_3:34295489-34295508 Msa0638760:CDS 40.0%
AGACATCACACTCACAGAAA+TGG + chr4_3:34295517-34295536 Msa0638760:CDS 40.0%
GACATCACACTCACAGAAAT+GGG + chr4_3:34295518-34295537 Msa0638760:CDS 40.0%
GATGCTATTAACACAAGGGT+TGG + chr4_3:34295548-34295567 Msa0638760:CDS 40.0%
CTATTAACACAAGGGTTGGA+GGG + chr4_3:34295552-34295571 Msa0638760:CDS 40.0%
!! TATGGTTCTAAAGGCCTAAG+CGG + chr4_3:34295575-34295594 Msa0638760:CDS 40.0%
TTCCTTGATGAACCAACTAG+TGG + chr4_3:34295656-34295675 Msa0638760:CDS 40.0%
CTTCCTACTATGTTATGAGC+AGG + chr4_3:34295693-34295712 Msa0638760:CDS 40.0%
TTCACTACTAGGCTGATGTA+TGG - chr4_3:34295768-34295787 None:intergenic 40.0%
TCTGGGGAGACAGTATATTT+CGG + chr4_3:34295824-34295843 Msa0638760:CDS 40.0%
! GATTATAGTGAGTTGGGCAA+GGG - chr4_3:34295969-34295988 None:intergenic 40.0%
ACATTATTTAGGCTCAGGGT+TGG - chr4_3:34296045-34296064 None:intergenic 40.0%
!! GAAAGCTTTGGGAACTTTAG+AGG + chr4_3:34296071-34296090 Msa0638760:intron 40.0%
ACTTAGCGACAAAAATCGAG+AGG - chr4_3:34296225-34296244 None:intergenic 40.0%
TTCAAATCCAACAATGAGGG+AGG + chr4_3:34296549-34296568 Msa0638760:intron 40.0%
ATTTGTACCTCCCTCATTGT+TGG - chr4_3:34296559-34296578 None:intergenic 40.0%
CAACGAAAAACGTCATCTTC+TGG + chr4_3:34296632-34296651 Msa0638760:intron 40.0%
CGATGATCAACAACAACCAT+TGG - chr4_3:34296772-34296791 None:intergenic 40.0%
!! GGTTAATGTTGGTTCAATGG+TGG - chr4_3:34296853-34296872 None:intergenic 40.0%
! TCTAGGATTTGAGTGCGATA+AGG + chr4_3:34296909-34296928 Msa0638760:intron 40.0%
ATCACGATACAATTGTTGGG+AGG - chr4_3:34296990-34297009 None:intergenic 40.0%
ATTGCCATTGCTATAAGCCT+AGG + chr4_3:34297043-34297062 Msa0638760:CDS 40.0%
! TTATAAATCACTGGGAGTGC+TGG - chr4_3:34297347-34297366 None:intergenic 40.0%
! ACTTTCATGACACTTGTTGG+TGG + chr4_3:34297447-34297466 Msa0638760:CDS 40.0%
TCCCTTGATTGAGGAAATGA+AGG + chr4_3:34297476-34297495 Msa0638760:CDS 40.0%
TCAATGCAGTGAAGCTTCAA+AGG - chr4_3:34297520-34297539 None:intergenic 40.0%
ATGTTCCCTTCCACCATATT+AGG + chr4_3:34297873-34297892 Msa0638760:intron 40.0%
GAGAGATTAAATGGGCACTA+TGG + chr4_3:34297907-34297926 Msa0638760:CDS 40.0%
TACCTTTCTGGACTACACAA+AGG + chr4_3:34298015-34298034 Msa0638760:CDS 40.0%
CCCACATCATAATGGCAAAT+AGG - chr4_3:34298071-34298090 None:intergenic 40.0%
! CTTCCCAAATTTTGTGATGG+GGG + chr4_3:34298122-34298141 Msa0638760:CDS 40.0%
TGACCCCCATCACAAAATTT+GGG - chr4_3:34298128-34298147 None:intergenic 40.0%
ATGACCCCCATCACAAAATT+TGG - chr4_3:34298129-34298148 None:intergenic 40.0%
!! GAAGGACTTGCGATTTTAAC+AGG + chr4_3:34298165-34298184 Msa0638760:CDS 40.0%
!! AATGGCTTTGGAAGATCACT+AGG - chr4_3:34298207-34298226 None:intergenic 40.0%
GTGATCTTCCAAAGCCATTA+TGG + chr4_3:34298208-34298227 Msa0638760:CDS 40.0%
AGGAAGGAAATGTAGTAGCA+GGG - chr4_3:34298240-34298259 None:intergenic 40.0%
! TTGGAAAGCATAAGTGAGGA+AGG - chr4_3:34298256-34298275 None:intergenic 40.0%
TTCCTCACTTATGCTTTCCA+AGG + chr4_3:34298255-34298274 Msa0638760:CDS 40.0%
! ATCCTTGGAAAGCATAAGTG+AGG - chr4_3:34298260-34298279 None:intergenic 40.0%
TTTGTTGGGTATCAAGAAGG+AGG + chr4_3:34298309-34298328 Msa0638760:CDS 40.0%
ATCTCTACCACTAACGGTTA+TGG - chr4_3:34298337-34298356 None:intergenic 40.0%
CTTGGTCATCAATAAGGTCA+AGG + chr4_3:34298452-34298471 Msa0638760:CDS 40.0%
CGATTTACGCTAGAAACAGT+AGG - chr4_3:34298489-34298508 None:intergenic 40.0%
TTAGTTCACTGACATGGGTG+AGG + chr4_3:34294586-34294605 Msa0638760:exon 45.0%
TAGTTCACTGACATGGGTGA+GGG + chr4_3:34294587-34294606 Msa0638760:exon 45.0%
AGGGTGGAATTACTGTGACA+TGG + chr4_3:34294615-34294634 Msa0638760:CDS 45.0%
GGGTGGAATTACTGTGACAT+GGG + chr4_3:34294616-34294635 Msa0638760:CDS 45.0%
TGTGACATGGGAGAATTTGG+AGG + chr4_3:34294628-34294647 Msa0638760:CDS 45.0%
TTACAGGTTATGCTCAGCCA+GGG + chr4_3:34294696-34294715 Msa0638760:CDS 45.0%
ATTACTGCCAAAAGCTTCCC+TGG - chr4_3:34294716-34294735 None:intergenic 45.0%
! AGGGAAGCTTTTGGCAGTAA+TGG + chr4_3:34294715-34294734 Msa0638760:CDS 45.0%
! GGGAAGCTTTTGGCAGTAAT+GGG + chr4_3:34294716-34294735 Msa0638760:CDS 45.0%
ATCCACACTCCTTGATGCTT+TGG + chr4_3:34294757-34294776 Msa0638760:CDS 45.0%
TGTCGCATATAACCTCACTC+TGG - chr4_3:34295027-34295046 None:intergenic 45.0%
ATTCGAGCAATGTTGCAGGA+AGG + chr4_3:34295183-34295202 Msa0638760:intron 45.0%
GCTATTAACACAAGGGTTGG+AGG + chr4_3:34295551-34295570 Msa0638760:CDS 45.0%
!! GTTGGAGGGTATGGTTCTAA+AGG + chr4_3:34295566-34295585 Msa0638760:CDS 45.0%
!! ATGGTTCTAAAGGCCTAAGC+GGG + chr4_3:34295576-34295595 Msa0638760:CDS 45.0%
! GTCCACTAGTTGGTTCATCA+AGG - chr4_3:34295661-34295680 None:intergenic 45.0%
GCACTATCAAGTCCACTAGT+TGG - chr4_3:34295671-34295690 None:intergenic 45.0%
ACCTCTGTCTTCTTTCCTCT+GGG + chr4_3:34295807-34295826 Msa0638760:CDS 45.0%
GAAATATACTGTCTCCCCAG+AGG - chr4_3:34295825-34295844 None:intergenic 45.0%
!! TACAGCTTCTGAAGCAGATC+AGG + chr4_3:34295847-34295866 Msa0638760:CDS 45.0%
!! CTTCTGAAGCAGATCAGGTT+AGG + chr4_3:34295852-34295871 Msa0638760:intron 45.0%
! GGATTATAGTGAGTTGGGCA+AGG - chr4_3:34295970-34295989 None:intergenic 45.0%
CAGGACACTGAAGAATGCTT+TGG + chr4_3:34296356-34296375 Msa0638760:intron 45.0%
AGTCAGTGTCTCAGTCATGA+GGG - chr4_3:34296681-34296700 None:intergenic 45.0%
AAGTCAGTGTCTCAGTCATG+AGG - chr4_3:34296682-34296701 None:intergenic 45.0%
!! GACTGAGACACTGACTTGAT+CGG + chr4_3:34296685-34296704 Msa0638760:intron 45.0%
CGATGAGCTTCTACTTCCAA+TGG + chr4_3:34296753-34296772 Msa0638760:intron 45.0%
TGAGTGCGATAAGGAATAGG+AGG + chr4_3:34296918-34296937 Msa0638760:CDS 45.0%
TCCATTTCTGACTCAGTGCA+TGG + chr4_3:34296949-34296968 Msa0638760:CDS 45.0%
ACCATGCACTGAGTCAGAAA+TGG - chr4_3:34296953-34296972 None:intergenic 45.0%
AGAGCCTAGGCTTATAGCAA+TGG - chr4_3:34297050-34297069 None:intergenic 45.0%
CTTGGTAGAAGATAGAGCCT+AGG - chr4_3:34297063-34297082 None:intergenic 45.0%
GGCTCTATCTTCTACCAAGT+CGG + chr4_3:34297064-34297083 Msa0638760:CDS 45.0%
ATCGAGTACTTGAACCGACT+TGG - chr4_3:34297081-34297100 None:intergenic 45.0%
CATTGTACATGGCATGCTTC+AGG + chr4_3:34297386-34297405 Msa0638760:intron 45.0%
TGGATTCTCTCCCTTGATTG+AGG + chr4_3:34297467-34297486 Msa0638760:CDS 45.0%
GTCCTTTGTGTAGTCCAGAA+AGG - chr4_3:34298020-34298039 None:intergenic 45.0%
GCTCTCAACCCACATCATAA+TGG - chr4_3:34298079-34298098 None:intergenic 45.0%
! TGAGAGCCTTATGATGGTTG+TGG + chr4_3:34298092-34298111 Msa0638760:CDS 45.0%
! GAGAGCCTTATGATGGTTGT+GGG + chr4_3:34298093-34298112 Msa0638760:CDS 45.0%
! AGAGCCTTATGATGGTTGTG+GGG + chr4_3:34298094-34298113 Msa0638760:CDS 45.0%
TACTCCCCACAACCATCATA+AGG - chr4_3:34298101-34298120 None:intergenic 45.0%
ATCATTGCTGGTGGAGTTGA+AGG + chr4_3:34298147-34298166 Msa0638760:CDS 45.0%
!! GGACTTGCGATTTTAACAGG+TGG + chr4_3:34298168-34298187 Msa0638760:CDS 45.0%
GGGTACTTCCATAATGGCTT+TGG - chr4_3:34298219-34298238 None:intergenic 45.0%
!! TAGCAGGGGTACTTCCATAA+TGG - chr4_3:34298225-34298244 None:intergenic 45.0%
GGAAGGAAATGTAGTAGCAG+GGG - chr4_3:34298239-34298258 None:intergenic 45.0%
GAGGAAGGAAATGTAGTAGC+AGG - chr4_3:34298241-34298260 None:intergenic 45.0%
TGCAAATGGGTCACTCTAAG+TGG + chr4_3:34298379-34298398 Msa0638760:CDS 45.0%
GCAAATGGGTCACTCTAAGT+GGG + chr4_3:34298380-34298399 Msa0638760:CDS 45.0%
AGTTCACTGACATGGGTGAG+GGG + chr4_3:34294588-34294607 Msa0638760:exon 50.0%
TGACATGGGTGAGGGGAAAA+AGG + chr4_3:34294595-34294614 Msa0638760:exon 50.0%
GACATGGGTGAGGGGAAAAA+GGG + chr4_3:34294596-34294615 Msa0638760:exon 50.0%
CTTACAGGTTATGCTCAGCC+AGG + chr4_3:34294695-34294714 Msa0638760:CDS 50.0%
!! TTGGCAGTAATGGGTCCTTC+AGG + chr4_3:34294725-34294744 Msa0638760:CDS 50.0%
! TGCCAAAGCATCAAGGAGTG+TGG - chr4_3:34294762-34294781 None:intergenic 50.0%
ACACTCCTTGATGCTTTGGC+AGG + chr4_3:34294761-34294780 Msa0638760:CDS 50.0%
CATTGAGCATGGTGGCAGAA+AGG - chr4_3:34295369-34295388 None:intergenic 50.0%
AACACAAGGGTTGGAGGGTA+TGG + chr4_3:34295557-34295576 Msa0638760:CDS 50.0%
!! TGGTTCTAAAGGCCTAAGCG+GGG + chr4_3:34295577-34295596 Msa0638760:CDS 50.0%
GACCTCTGTCTTCTTTCCTC+TGG + chr4_3:34295806-34295825 Msa0638760:CDS 50.0%
CCTCTGTCTTCTTTCCTCTG+GGG + chr4_3:34295808-34295827 Msa0638760:CDS 50.0%
!! GACACTGACTTGATCGGTGT+CGG + chr4_3:34296691-34296710 Msa0638760:intron 50.0%
TCCAGCGTGACCACATATCA+AGG + chr4_3:34296823-34296842 Msa0638760:intron 50.0%
ACCTTGATATGTGGTCACGC+TGG - chr4_3:34296827-34296846 None:intergenic 50.0%
AGCGTGACCACATATCAAGG+TGG + chr4_3:34296826-34296845 Msa0638760:intron 50.0%
! TGGTGGACCACCTTGATATG+TGG - chr4_3:34296836-34296855 None:intergenic 50.0%
CTGAGTCAGAAATGGAGCGT+GGG - chr4_3:34296945-34296964 None:intergenic 50.0%
ACTGAGTCAGAAATGGAGCG+TGG - chr4_3:34296946-34296965 None:intergenic 50.0%
! GTGGGTTGAGAGCCTTATGA+TGG + chr4_3:34298086-34298105 Msa0638760:CDS 50.0%
!! GGAGGTACCATAACCGTTAG+TGG + chr4_3:34298327-34298346 Msa0638760:CDS 50.0%
ATGGGTGAGGGGAAAAAGGG+TGG + chr4_3:34294599-34294618 Msa0638760:CDS 55.0%
! TGCTCAGCCAGGGAAGCTTT+TGG + chr4_3:34294706-34294725 Msa0638760:CDS 55.0%
!! GTAATGGGTCCTTCAGGCTG+TGG + chr4_3:34294731-34294750 Msa0638760:CDS 55.0%
GTGGATTTGCCACAGCCTGA+AGG - chr4_3:34294743-34294762 None:intergenic 55.0%
!! GGTTCTAAAGGCCTAAGCGG+GGG + chr4_3:34295578-34295597 Msa0638760:CDS 55.0%
!! GTTCTAAAGGCCTAAGCGGG+GGG + chr4_3:34295579-34295598 Msa0638760:CDS 55.0%
CCCCAGAGGAAAGAAGACAG+AGG - chr4_3:34295811-34295830 None:intergenic 55.0%
CATGGCATGCTTCAGGTCAG+AGG + chr4_3:34297393-34297412 Msa0638760:intron 55.0%
! GTGATGGGGGTCATCATTGC+TGG + chr4_3:34298135-34298154 Msa0638760:CDS 55.0%
ATGGGGGTCATCATTGCTGG+TGG + chr4_3:34298138-34298157 Msa0638760:CDS 55.0%
TCCTTCTTTGCCCCCCGCTT+AGG - chr4_3:34295592-34295611 None:intergenic 60.0%
GTGTCTCAGTCATGAGGGCG+AGG - chr4_3:34296676-34296695 None:intergenic 60.0%
GCCTAAGCGGGGGGCAAAGA+AGG + chr4_3:34295588-34295607 Msa0638760:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 34294519 34298874 34294519 ID=Msa0638760;Name=Msa0638760
chr4_3 mRNA 34294519 34298874 34294519 ID=Msa0638760-mRNA-1;Parent=Msa0638760;Name=Msa0638760-mRNA-1;_AED=0.25;_eAED=0.25;_QI=80|1|1|1|1|1|8|320|630
chr4_3 exon 34294519 34294782 34294519 ID=Msa0638760-mRNA-1:exon:7893;Parent=Msa0638760-mRNA-1
chr4_3 exon 34295201 34295280 34295201 ID=Msa0638760-mRNA-1:exon:7894;Parent=Msa0638760-mRNA-1
chr4_3 exon 34295398 34295868 34295398 ID=Msa0638760-mRNA-1:exon:7895;Parent=Msa0638760-mRNA-1
chr4_3 exon 34295946 34296032 34295946 ID=Msa0638760-mRNA-1:exon:7896;Parent=Msa0638760-mRNA-1
chr4_3 exon 34296359 34296484 34296359 ID=Msa0638760-mRNA-1:exon:7897;Parent=Msa0638760-mRNA-1
chr4_3 exon 34296914 34297108 34296914 ID=Msa0638760-mRNA-1:exon:7898;Parent=Msa0638760-mRNA-1
chr4_3 exon 34297408 34297497 34297408 ID=Msa0638760-mRNA-1:exon:7899;Parent=Msa0638760-mRNA-1
chr4_3 exon 34297895 34298874 34297895 ID=Msa0638760-mRNA-1:exon:7900;Parent=Msa0638760-mRNA-1
chr4_3 five_prime_UTR 34294519 34294598 34294519 ID=Msa0638760-mRNA-1:five_prime_utr;Parent=Msa0638760-mRNA-1
chr4_3 CDS 34294599 34294782 34294599 ID=Msa0638760-mRNA-1:cds;Parent=Msa0638760-mRNA-1
chr4_3 CDS 34295201 34295280 34295201 ID=Msa0638760-mRNA-1:cds;Parent=Msa0638760-mRNA-1
chr4_3 CDS 34295398 34295868 34295398 ID=Msa0638760-mRNA-1:cds;Parent=Msa0638760-mRNA-1
chr4_3 CDS 34295946 34296032 34295946 ID=Msa0638760-mRNA-1:cds;Parent=Msa0638760-mRNA-1
chr4_3 CDS 34296359 34296484 34296359 ID=Msa0638760-mRNA-1:cds;Parent=Msa0638760-mRNA-1
chr4_3 CDS 34296914 34297108 34296914 ID=Msa0638760-mRNA-1:cds;Parent=Msa0638760-mRNA-1
chr4_3 CDS 34297408 34297497 34297408 ID=Msa0638760-mRNA-1:cds;Parent=Msa0638760-mRNA-1
chr4_3 CDS 34297895 34298554 34297895 ID=Msa0638760-mRNA-1:cds;Parent=Msa0638760-mRNA-1
chr4_3 three_prime_UTR 34298555 34298874 34298555 ID=Msa0638760-mRNA-1:three_prime_utr;Parent=Msa0638760-mRNA-1
Gene Sequence

>Msa0638760

ATGGGTGAGGGGAAAAAGGGTGGAATTACTGTGACATGGGAGAATTTGGAGGCCATTGTTACAAATGGAAAGAATAGAAAACTAATTCTGCATGGACTTACAGGTTATGCTCAGCCAGGGAAGCTTTTGGCAGTAATGGGTCCTTCAGGCTGTGGCAAATCCACACTCCTTGATGCTTTGGCAGGAAGGTTGAAATCAAACATACAGCAATCAGGGAAAATTCTAATCAATGGCAAAAAACAAGCACTGGCTTATGGAACATCAGGCTATGTAACACAAGATGATGCTATGCTGTCAACTTTAACAGCTGGTGAAACATTATACTACTCAGCTCAACTTCAATTTCCAAACTCAATGTCTATAGCAGAGAAGAAGAGGCAAGCAGACATCACACTCACAGAAATGGGCCTGCAAGATGCTATTAACACAAGGGTTGGAGGGTATGGTTCTAAAGGCCTAAGCGGGGGGCAAAGAAGGAGACTAAGCATTTGCATTGAGATTCTAACACACCCTAGACTTCTTTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTACTATGTTATGAGCAGGATTGCAAGTTTAAGTCTAAGGGATGATATTCAAAGGACAATTGTTGCATCCATACATCAGCCTAGTAGTGAAGTTTTTCAACTTTTTGATGACCTCTGTCTTCTTTCCTCTGGGGAGACAGTATATTTCGGTACAGCTTCTGAAGCAGATCAGTTTTTTGCTTCAAATGGTTTCCCTTGCCCAACTCACTATAATCCTTCTGATCACTACTTAAGGATCATAAACAATGATTTTGAACAGGACACTGAAGAATGCTTTGGTAAAGGAGTAATTACTGAAGACGCAATTGGTATCCTTGTAAATTCTTATAAAGAATCTGAAATTAAAAGTCAAGTTTTGATTGAAGTTACAAAAATAAGTGAAAGAGATTTGAGTGCGATAAGGAATAGGAGGACCCACGCTCCATTTCTGACTCAGTGCATGGTTCTTATAAAAAGATCCTCCCAACAATTGTATCGTGATATCAGCAATTACTGGTTACGTCTTGTTGTCTTTATTGCCATTGCTATAAGCCTAGGCTCTATCTTCTACCAAGTCGGTTCAAGTACTCGATCTATTCAGGTCAGAGGATCGCTACTTTCATTTTTTATGTCAGTCTTGACTTTCATGACACTTGTTGGTGGATTCTCTCCCTTGATTGAGGAAATGAAGGTATTTAAACGAGAGAGATTAAATGGGCACTATGGTATTACTGCTTTTCTGATTGGCAATATATTATCTTCTATTCCATACATGCTAATGATCTCTCTCATTTCCGGATCAATAGTGTGTTACCTTTCTGGACTACACAAAGGACTAGAGCACTATCTATATTTTGCTTCTATCCTATTTGCCATTATGATGTGGGTTGAGAGCCTTATGATGGTTGTGGGGAGTATCTTCCCAAATTTTGTGATGGGGGTCATCATTGCTGGTGGAGTTGAAGGACTTGCGATTTTAACAGGTGGATTCTATCGAATTCCTAGTGATCTTCCAAAGCCATTATGGAAGTACCCCTGCTACTACATTTCCTTCCTCACTTATGCTTTCCAAGGATCATTCAAGAATGAATTTGAAGGCTTAACATTTGTTGGGTATCAAGAAGGAGGTACCATAACCGTTAGTGGTAGAGATGTACTAACTGATATATGGCATGTGCAAATGGGTCACTCTAAGTGGGTTGATCTTGTTATCATGTTTGGTATGATAGTTGTTTATCGAGTTCTATTCTTGGTCATCAATAAGGTCAAGGAGAAGTCAAACCCTACTGTTTCTAGCGTAAATCGACCCCAAGCAAAAACTTTCTCTAGAACGAATATGGATGAACTCTAA
Protein sequence

>Msa0638760

MGEGKKGGITVTWENLEAIVTNGKNRKLILHGLTGYAQPGKLLAVMGPSGCGKSTLLDALAGRLKSNIQQSGKILINGKKQALAYGTSGYVTQDDAMLSTLTAGETLYYSAQLQFPNSMSIAEKKRQADITLTEMGLQDAINTRVGGYGSKGLSGGQRRRLSICIEILTHPRLLFLDEPTSGLDSAASYYVMSRIASLSLRDDIQRTIVASIHQPSSEVFQLFDDLCLLSSGETVYFGTASEADQFFASNGFPCPTHYNPSDHYLRIINNDFEQDTEECFGKGVITEDAIGILVNSYKESEIKSQVLIEVTKISERDLSAIRNRRTHAPFLTQCMVLIKRSSQQLYRDISNYWLRLVVFIAIAISLGSIFYQVGSSTRSIQVRGSLLSFFMSVLTFMTLVGGFSPLIEEMKVFKRERLNGHYGITAFLIGNILSSIPYMLMISLISGSIVCYLSGLHKGLEHYLYFASILFAIMMWVESLMMVVGSIFPNFVMGVIIAGGVEGLAILTGGFYRIPSDLPKPLWKYPCYYISFLTYAFQGSFKNEFEGLTFVGYQEGGTITVSGRDVLTDIWHVQMGHSKWVDLVIMFGMIVVYRVLFLVINKVKEKSNPTVSSVNRPQAKTFSRTNMDEL*