Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235190 | PNY18001.1 | 59.259 | 324 | 56 | 3 | 1 | 249 | 1 | 323 | 2.96e-117 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235190 | sp|Q9FJ47|SAG12_ARATH | 50.838 | 179 | 87 | 1 | 82 | 259 | 166 | 344 | 7.44e-55 | 183 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235190 | A0A2K3PRV5 | 59.259 | 324 | 56 | 3 | 1 | 249 | 1 | 323 | 1.41e-117 | 350 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021460 | Msa0235190 | 0.841407 | 4.840766e-58 | -8.615850e-47 |
| Msa0033340 | Msa0235190 | 0.851335 | 9.492929e-61 | -8.615850e-47 |
| Msa0055690 | Msa0235190 | 0.800304 | 1.534932e-48 | -8.615850e-47 |
| Msa0055730 | Msa0235190 | 0.815313 | 9.855401e-52 | -8.615850e-47 |
| Msa0109970 | Msa0235190 | 0.818932 | 1.513907e-52 | -8.615850e-47 |
| Msa0109990 | Msa0235190 | 0.819110 | 1.379695e-52 | -8.615850e-47 |
| Msa0142230 | Msa0235190 | 0.848905 | 4.549599e-60 | -8.615850e-47 |
| Msa0153430 | Msa0235190 | 0.810568 | 1.080558e-50 | -8.615850e-47 |
| Msa0156170 | Msa0235190 | 0.827599 | 1.431095e-54 | -8.615850e-47 |
| Msa0156190 | Msa0235190 | 0.810145 | 1.333129e-50 | -8.615850e-47 |
| Msa0193010 | Msa0235190 | 0.896957 | 2.238202e-76 | -8.615850e-47 |
| Msa0203070 | Msa0235190 | 0.804123 | 2.511799e-49 | -8.615850e-47 |
| Msa0211680 | Msa0235190 | 0.815338 | 9.729539e-52 | -8.615850e-47 |
| Msa0212310 | Msa0235190 | 0.810768 | 9.779685e-51 | -8.615850e-47 |
| Msa0235190 | Msa0273560 | 0.828193 | 1.029758e-54 | -8.615850e-47 |
| Msa0235190 | Msa0273570 | 0.877199 | 7.610104e-69 | -8.615850e-47 |
| Msa0235190 | Msa0273580 | 0.909072 | 8.530603e-82 | -8.615850e-47 |
| Msa0235190 | Msa0284810 | 0.805806 | 1.117437e-49 | -8.615850e-47 |
| Msa0235190 | Msa0313780 | 0.912152 | 2.701480e-83 | -8.615850e-47 |
| Msa0235190 | Msa0313920 | 0.880511 | 5.166790e-70 | -8.615850e-47 |
| Msa0235190 | Msa0323550 | 0.827549 | 1.471512e-54 | -8.615850e-47 |
| Msa0235190 | Msa0350670 | 0.824156 | 9.401617e-54 | -8.615850e-47 |
| Msa0235190 | Msa0363980 | 0.822577 | 2.199100e-53 | -8.615850e-47 |
| Msa0235190 | Msa0365810 | 0.820192 | 7.808832e-53 | -8.615850e-47 |
| Msa0235190 | Msa0389280 | 0.819516 | 1.115001e-52 | -8.615850e-47 |
| Msa0235190 | Msa0389310 | 0.808618 | 2.835479e-50 | -8.615850e-47 |
| Msa0235190 | Msa0452410 | 0.840937 | 6.435901e-58 | -8.615850e-47 |
| Msa0235190 | Msa0458700 | 0.859327 | 4.465446e-63 | -8.615850e-47 |
| Msa0235190 | Msa0506000 | 0.820558 | 6.438158e-53 | -8.615850e-47 |
| Msa0235190 | Msa0512420 | 0.808372 | 3.199204e-50 | -8.615850e-47 |
| Msa0235190 | Msa0533290 | 0.845120 | 4.952117e-59 | -8.615850e-47 |
| Msa0235190 | Msa0533430 | 0.844624 | 6.735722e-59 | -8.615850e-47 |
| Msa0235190 | Msa0555730 | 0.800854 | 1.185403e-48 | -8.615850e-47 |
| Msa0235190 | Msa0580610 | 0.878212 | 3.370875e-69 | -8.615850e-47 |
| Msa0235190 | Msa0584130 | 0.836534 | 8.847837e-57 | -8.615850e-47 |
| Msa0235190 | Msa0618430 | 0.802506 | 5.432140e-49 | -8.615850e-47 |
| Msa0235190 | Msa0629850 | 0.839540 | 1.490303e-57 | -8.615850e-47 |
| Msa0235190 | Msa0629880 | 0.826845 | 2.168924e-54 | -8.615850e-47 |
| Msa0235190 | Msa0629940 | 0.800768 | 1.234623e-48 | -8.615850e-47 |
| Msa0235190 | Msa0641900 | 0.823729 | 1.184025e-53 | -8.615850e-47 |
| Msa0235190 | Msa0661870 | 0.816418 | 5.588063e-52 | -8.615850e-47 |
| Msa0235190 | Msa0668150 | 0.812585 | 3.936736e-51 | -8.615850e-47 |
| Msa0235190 | Msa0692170 | 0.803327 | 3.675550e-49 | -8.615850e-47 |
| Msa0235190 | Msa0702870 | 0.816918 | 4.316212e-52 | -8.615850e-47 |
| Msa0235190 | Msa0754180 | 0.820973 | 5.168020e-53 | -8.615850e-47 |
| Msa0235190 | Msa0784580 | 0.834031 | 3.791004e-56 | -8.615850e-47 |
| Msa0235190 | Msa0808180 | 0.802670 | 5.024438e-49 | -8.615850e-47 |
| Msa0235190 | Msa0815320 | 0.811224 | 7.791821e-51 | -8.615850e-47 |
| Msa0235190 | Msa0818010 | 0.859194 | 4.896423e-63 | -8.615850e-47 |
| Msa0235190 | Msa0818030 | 0.855536 | 5.908470e-62 | -8.615850e-47 |
| Msa0235190 | Msa0858360 | 0.841621 | 4.252669e-58 | -8.615850e-47 |
| Msa0235190 | Msa0865390 | 0.817633 | 2.979815e-52 | -8.615850e-47 |
| Msa0235190 | Msa0883370 | 0.865984 | 3.970633e-65 | -8.615850e-47 |
| Msa0235190 | Msa0884920 | 0.807613 | 4.640454e-50 | -8.615850e-47 |
| Msa0235190 | Msa0898370 | 0.807180 | 5.734170e-50 | -8.615850e-47 |
| Msa0235190 | Msa0912500 | 0.849229 | 3.698235e-60 | -8.615850e-47 |
| Msa0235190 | Msa0924370 | 0.824372 | 8.365483e-54 | -8.615850e-47 |
| Msa0235190 | Msa0940090 | 0.827185 | 1.798393e-54 | -8.615850e-47 |
| Msa0235190 | Msa0965750 | 0.817274 | 3.589496e-52 | -8.615850e-47 |
| Msa0235190 | Msa1006250 | 0.848635 | 5.404933e-60 | -8.615850e-47 |
| Msa0235190 | Msa1009270 | 0.800408 | 1.461687e-48 | -8.615850e-47 |
| Msa0235190 | Msa1020720 | 0.825750 | 3.952690e-54 | -8.615850e-47 |
| Msa0235190 | Msa1027240 | 0.846225 | 2.482449e-59 | -8.615850e-47 |
| Msa0235190 | Msa1055430 | 0.801063 | 1.074476e-48 | -8.615850e-47 |
| Msa0235190 | Msa1077950 | 0.825347 | 4.924762e-54 | -8.615850e-47 |
| Msa0235190 | Msa1107800 | 0.829716 | 4.405094e-55 | -8.615850e-47 |
| Msa0235190 | Msa1139410 | 0.805486 | 1.304494e-49 | -8.615850e-47 |
| Msa0235190 | Msa1195920 | 0.803598 | 3.229724e-49 | -8.615850e-47 |
| Msa0235190 | Msa1198090 | 0.835720 | 1.423769e-56 | -8.615850e-47 |
| Msa0235190 | Msa1275770 | 0.825317 | 5.006075e-54 | -8.615850e-47 |
| Msa0235190 | Msa1288000 | 0.805282 | 1.438922e-49 | -8.615850e-47 |
| Msa0235190 | Msa1289130 | 0.801572 | 8.453598e-49 | -8.615850e-47 |
| Msa0235190 | Msa1308580 | 0.807250 | 5.540085e-50 | -8.615850e-47 |
| Msa0235190 | Msa1308620 | 0.808259 | 3.381795e-50 | -8.615850e-47 |
| Msa0235190 | Msa1324780 | 0.809805 | 1.577730e-50 | -8.615850e-47 |
| Msa0235190 | Msa1336490 | 0.806310 | 8.754802e-50 | -8.615850e-47 |
| Msa0235190 | Msa1359820 | 0.824165 | 9.355068e-54 | -8.615850e-47 |
| Msa0235190 | Msa1384290 | 0.819304 | 1.246217e-52 | -8.615850e-47 |
| Msa0235190 | Msa1384320 | 0.813276 | 2.777903e-51 | -8.615850e-47 |
| Msa0235190 | Msa1396830 | 0.801923 | 7.160419e-49 | -8.615850e-47 |
| Msa0235190 | Msa1406600 | 0.816334 | 5.833145e-52 | -8.615850e-47 |
| Msa0235190 | Msa1423990 | 0.823485 | 1.350721e-53 | -8.615850e-47 |
| Msa0235190 | Msa1444370 | 0.864204 | 1.438465e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235190 | MtrunA17_Chr2g0283671 | 92.857 | 168 | 11 | 1 | 82 | 249 | 50 | 216 | 5.24e-103 | 299 |
| Msa0235190 | MtrunA17_Chr2g0283661 | 48.084 | 287 | 84 | 4 | 1 | 249 | 1 | 260 | 3.12e-80 | 243 |
| Msa0235190 | MtrunA17_Chr4g0060251 | 37.618 | 319 | 121 | 7 | 1 | 241 | 7 | 325 | 1.27e-60 | 195 |
| Msa0235190 | MtrunA17_Chr5g0405751 | 37.539 | 317 | 115 | 6 | 4 | 241 | 12 | 324 | 7.14e-60 | 193 |
| Msa0235190 | MtrunA17_Chr4g0041081 | 52.514 | 179 | 82 | 2 | 84 | 259 | 165 | 343 | 1.33e-59 | 192 |
| Msa0235190 | MtrunA17_Chr4g0041061 | 57.764 | 161 | 65 | 2 | 84 | 241 | 165 | 325 | 1.70e-59 | 192 |
| Msa0235190 | MtrunA17_Chr4g0040881 | 57.764 | 161 | 65 | 2 | 84 | 241 | 165 | 325 | 2.04e-59 | 192 |
| Msa0235190 | MtrunA17_Chr4g0024411 | 57.143 | 161 | 66 | 2 | 84 | 241 | 163 | 323 | 4.96e-58 | 188 |
| Msa0235190 | MtrunA17_Chr4g0041471 | 53.125 | 160 | 73 | 2 | 84 | 241 | 163 | 322 | 2.73e-54 | 179 |
| Msa0235190 | MtrunA17_Chr4g0058081 | 52.500 | 160 | 73 | 3 | 84 | 241 | 166 | 324 | 3.16e-52 | 174 |
| Msa0235190 | MtrunA17_Chr7g0248391 | 46.774 | 186 | 91 | 4 | 84 | 266 | 161 | 341 | 5.86e-51 | 170 |
| Msa0235190 | MtrunA17_Chr3g0116551 | 50.625 | 160 | 77 | 2 | 84 | 241 | 166 | 325 | 1.32e-50 | 170 |
| Msa0235190 | MtrunA17_Chr4g0040851 | 50.307 | 163 | 77 | 3 | 84 | 243 | 181 | 342 | 2.70e-50 | 169 |
| Msa0235190 | MtrunA17_Chr3g0142071 | 48.315 | 178 | 89 | 3 | 84 | 259 | 178 | 354 | 7.26e-50 | 170 |
| Msa0235190 | MtrunA17_Chr4g0041481 | 36.577 | 298 | 112 | 10 | 19 | 241 | 25 | 320 | 2.84e-49 | 166 |
| Msa0235190 | MtrunA17_Chr4g0041521 | 37.248 | 298 | 110 | 10 | 19 | 241 | 25 | 320 | 3.13e-49 | 166 |
| Msa0235190 | MtrunA17_Chr3g0144281 | 46.067 | 178 | 93 | 3 | 84 | 259 | 170 | 346 | 7.97e-49 | 165 |
| Msa0235190 | MtrunA17_Chr2g0315491 | 50.000 | 180 | 85 | 3 | 84 | 260 | 161 | 338 | 1.15e-48 | 164 |
| Msa0235190 | MtrunA17_Chr2g0319991 | 45.604 | 182 | 94 | 3 | 84 | 262 | 164 | 343 | 5.23e-48 | 162 |
| Msa0235190 | MtrunA17_Chr2g0325121 | 45.251 | 179 | 94 | 3 | 84 | 259 | 158 | 335 | 2.05e-47 | 161 |
| Msa0235190 | MtrunA17_Chr1g0156161 | 48.503 | 167 | 81 | 4 | 84 | 247 | 87 | 251 | 2.48e-47 | 159 |
| Msa0235190 | MtrunA17_Chr1g0208261 | 49.708 | 171 | 78 | 4 | 84 | 247 | 217 | 386 | 7.64e-47 | 163 |
| Msa0235190 | MtrunA17_Chr1g0153011 | 51.250 | 160 | 75 | 3 | 84 | 241 | 164 | 322 | 8.95e-47 | 162 |
| Msa0235190 | MtrunA17_Chr3g0134231 | 52.147 | 163 | 69 | 5 | 84 | 241 | 183 | 341 | 1.29e-46 | 162 |
| Msa0235190 | MtrunA17_Chr4g0053311 | 50.000 | 160 | 77 | 3 | 84 | 241 | 163 | 321 | 2.23e-46 | 159 |
| Msa0235190 | MtrunA17_Chr2g0311471 | 33.233 | 331 | 128 | 12 | 1 | 242 | 1 | 327 | 8.44e-46 | 157 |
| Msa0235190 | MtrunA17_Chr2g0311381 | 52.410 | 166 | 69 | 8 | 83 | 242 | 170 | 331 | 7.17e-44 | 152 |
| Msa0235190 | MtrunA17_Chr7g0248811 | 45.399 | 163 | 81 | 3 | 84 | 242 | 159 | 317 | 3.42e-43 | 150 |
| Msa0235190 | MtrunA17_Chr2g0311391 | 47.059 | 170 | 76 | 8 | 83 | 246 | 195 | 356 | 5.49e-38 | 137 |
| Msa0235190 | MtrunA17_Chr2g0283901 | 41.899 | 179 | 98 | 4 | 85 | 259 | 178 | 354 | 8.64e-37 | 136 |
| Msa0235190 | MtrunA17_Chr0c27g0493921 | 47.170 | 159 | 75 | 6 | 88 | 239 | 175 | 331 | 1.31e-33 | 125 |
| Msa0235190 | MtrunA17_Chr4g0070441 | 47.170 | 159 | 75 | 6 | 88 | 239 | 175 | 331 | 1.52e-33 | 125 |
| Msa0235190 | MtrunA17_Chr2g0283741 | 39.881 | 168 | 96 | 3 | 85 | 248 | 180 | 346 | 1.80e-33 | 125 |
| Msa0235190 | MtrunA17_Chr1g0199131 | 37.368 | 190 | 100 | 6 | 85 | 257 | 180 | 367 | 4.09e-32 | 122 |
| Msa0235190 | MtrunA17_Chr7g0248421 | 40.678 | 177 | 94 | 4 | 52 | 220 | 33 | 206 | 5.78e-32 | 117 |
| Msa0235190 | MtrunA17_Chr4g0035551 | 38.506 | 174 | 88 | 5 | 85 | 241 | 170 | 341 | 1.77e-30 | 117 |
| Msa0235190 | MtrunA17_Chr1g0155781 | 38.378 | 185 | 95 | 6 | 85 | 252 | 174 | 356 | 3.45e-30 | 116 |
| Msa0235190 | MtrunA17_Chr8g0379151 | 43.210 | 162 | 83 | 5 | 84 | 241 | 195 | 351 | 7.13e-30 | 115 |
| Msa0235190 | MtrunA17_Chr7g0248371 | 46.903 | 113 | 53 | 2 | 163 | 270 | 34 | 144 | 8.65e-28 | 104 |
| Msa0235190 | MtrunA17_Chr7g0248661 | 57.895 | 57 | 24 | 0 | 186 | 242 | 2 | 58 | 4.67e-19 | 79.3 |
| Msa0235190 | MtrunA17_Chr4g0036731 | 36.025 | 161 | 74 | 7 | 85 | 241 | 170 | 305 | 2.30e-17 | 80.5 |
| Msa0235190 | MtrunA17_Chr8g0379671 | 32.886 | 149 | 88 | 4 | 70 | 212 | 1 | 143 | 4.36e-16 | 74.3 |
| Msa0235190 | MtrunA17_Chr7g0271041 | 31.285 | 179 | 100 | 7 | 91 | 247 | 152 | 329 | 1.09e-15 | 76.3 |
| Msa0235190 | MtrunA17_Chr4g0036281 | 32.727 | 165 | 78 | 7 | 85 | 241 | 170 | 309 | 5.80e-15 | 73.9 |
| Msa0235190 | MtrunA17_Chr4g0037291 | 32.727 | 165 | 78 | 7 | 85 | 241 | 211 | 350 | 6.80e-15 | 73.9 |
| Msa0235190 | MtrunA17_Chr7g0271031 | 27.807 | 187 | 102 | 5 | 107 | 267 | 214 | 393 | 8.72e-15 | 73.6 |
| Msa0235190 | MtrunA17_Chr2g0283751 | 37.736 | 106 | 62 | 3 | 85 | 189 | 183 | 285 | 3.24e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0235190 | AT3G49340.1 | 39.349 | 338 | 119 | 8 | 3 | 259 | 7 | 339 | 9.11e-66 | 209 |
| Msa0235190 | AT2G27420.1 | 39.441 | 322 | 110 | 7 | 23 | 259 | 25 | 346 | 7.60e-63 | 201 |
| Msa0235190 | AT2G34080.1 | 38.788 | 330 | 115 | 9 | 4 | 248 | 5 | 332 | 1.73e-61 | 198 |
| Msa0235190 | AT1G29090.1 | 38.961 | 308 | 104 | 8 | 23 | 248 | 37 | 342 | 7.22e-56 | 184 |
| Msa0235190 | AT5G45890.1 | 50.838 | 179 | 87 | 1 | 82 | 259 | 166 | 344 | 7.57e-56 | 183 |
| Msa0235190 | AT1G29110.1 | 36.129 | 310 | 126 | 8 | 23 | 263 | 28 | 334 | 1.30e-55 | 182 |
| Msa0235190 | AT1G29080.1 | 38.944 | 303 | 102 | 8 | 27 | 248 | 33 | 333 | 2.71e-55 | 182 |
| Msa0235190 | AT3G48340.1 | 51.445 | 173 | 81 | 3 | 84 | 254 | 166 | 337 | 7.59e-53 | 176 |
| Msa0235190 | AT5G50260.1 | 51.250 | 160 | 76 | 2 | 84 | 241 | 164 | 323 | 1.82e-52 | 175 |
| Msa0235190 | AT3G19390.1 | 51.397 | 179 | 83 | 4 | 84 | 259 | 167 | 344 | 2.17e-52 | 177 |
| Msa0235190 | AT1G20850.1 | 50.898 | 167 | 79 | 3 | 84 | 248 | 176 | 341 | 2.18e-51 | 172 |
| Msa0235190 | AT1G09850.1 | 47.191 | 178 | 91 | 3 | 84 | 259 | 156 | 332 | 3.48e-49 | 168 |
| Msa0235190 | AT4G23520.1 | 48.603 | 179 | 88 | 4 | 84 | 259 | 171 | 348 | 1.43e-48 | 165 |
| Msa0235190 | AT4G35350.1 | 49.102 | 167 | 82 | 3 | 84 | 248 | 175 | 340 | 1.45e-48 | 165 |
| Msa0235190 | AT4G36880.1 | 50.000 | 160 | 77 | 3 | 84 | 241 | 183 | 341 | 1.82e-48 | 165 |
| Msa0235190 | AT5G43060.1 | 48.555 | 173 | 86 | 3 | 84 | 254 | 176 | 347 | 2.47e-48 | 167 |
| Msa0235190 | AT3G48350.1 | 47.701 | 174 | 88 | 3 | 84 | 254 | 164 | 337 | 1.79e-47 | 162 |
| Msa0235190 | AT4G11310.1 | 45.833 | 168 | 86 | 4 | 84 | 248 | 175 | 340 | 9.07e-47 | 160 |
| Msa0235190 | AT4G11320.2 | 45.238 | 168 | 87 | 4 | 84 | 248 | 182 | 347 | 2.67e-46 | 159 |
| Msa0235190 | AT4G11320.1 | 45.238 | 168 | 87 | 4 | 84 | 248 | 182 | 347 | 2.67e-46 | 159 |
| Msa0235190 | AT1G47128.1 | 45.109 | 184 | 90 | 6 | 84 | 262 | 175 | 352 | 9.30e-45 | 157 |
| Msa0235190 | AT1G06260.1 | 48.045 | 179 | 88 | 4 | 84 | 259 | 165 | 341 | 3.92e-44 | 153 |
| Msa0235190 | AT3G19400.1 | 46.995 | 183 | 87 | 6 | 84 | 260 | 168 | 346 | 4.37e-44 | 153 |
| Msa0235190 | AT3G43960.1 | 42.541 | 181 | 98 | 5 | 84 | 259 | 166 | 345 | 1.07e-36 | 134 |
| Msa0235190 | AT5G60360.3 | 43.820 | 178 | 89 | 7 | 88 | 258 | 183 | 356 | 5.53e-34 | 126 |
| Msa0235190 | AT5G60360.2 | 45.912 | 159 | 77 | 6 | 88 | 239 | 183 | 339 | 2.69e-33 | 125 |
| Msa0235190 | AT5G60360.1 | 45.912 | 159 | 77 | 6 | 88 | 239 | 183 | 339 | 2.97e-33 | 124 |
| Msa0235190 | AT4G39090.1 | 39.655 | 174 | 86 | 6 | 85 | 241 | 174 | 345 | 1.46e-32 | 123 |
| Msa0235190 | AT2G21430.1 | 38.919 | 185 | 94 | 7 | 85 | 252 | 171 | 353 | 3.49e-31 | 119 |
| Msa0235190 | AT3G54940.2 | 40.571 | 175 | 83 | 7 | 85 | 241 | 176 | 347 | 5.41e-31 | 119 |
| Msa0235190 | AT3G45310.2 | 45.283 | 159 | 78 | 6 | 88 | 239 | 183 | 339 | 1.43e-30 | 117 |
| Msa0235190 | AT3G45310.1 | 45.283 | 159 | 78 | 6 | 88 | 239 | 183 | 339 | 1.59e-30 | 117 |
| Msa0235190 | AT4G35350.2 | 50.000 | 110 | 53 | 2 | 84 | 191 | 175 | 284 | 1.39e-25 | 102 |
| Msa0235190 | AT4G16190.1 | 38.150 | 173 | 90 | 4 | 85 | 241 | 179 | 350 | 9.57e-25 | 102 |
| Msa0235190 | AT3G48350.2 | 49.541 | 109 | 52 | 3 | 84 | 189 | 164 | 272 | 1.02e-23 | 97.8 |
| Msa0235190 | AT3G19400.2 | 47.321 | 112 | 52 | 4 | 84 | 189 | 168 | 278 | 2.56e-20 | 88.6 |
| Msa0235190 | AT1G02305.1 | 27.749 | 191 | 117 | 4 | 78 | 247 | 142 | 332 | 2.12e-16 | 78.6 |
| Msa0235190 | AT4G01610.2 | 27.604 | 192 | 116 | 5 | 78 | 247 | 139 | 329 | 8.40e-16 | 76.6 |
| Msa0235190 | AT4G01610.1 | 27.604 | 192 | 116 | 5 | 78 | 247 | 139 | 329 | 9.07e-16 | 76.6 |
| Msa0235190 | AT3G54940.3 | 37.255 | 102 | 54 | 2 | 85 | 177 | 176 | 276 | 2.82e-15 | 74.3 |
| Msa0235190 | AT1G02300.1 | 28.111 | 217 | 133 | 6 | 78 | 272 | 159 | 374 | 2.90e-15 | 75.5 |
Find 56 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCATTTGATCATTTAAT+TGG | 0.195265 | 2_2:-8036800 | None:intergenic |
| AAGCAAAGAGCTTCATTAAA+AGG | 0.271345 | 2_2:-8037231 | Msa0235200:CDS |
| AAATTCTGCCTACATATAAA+TGG | 0.286686 | 2_2:+8037281 | Msa0235190:three_prime_UTR |
| TACATGGGAGATGTTTATTC+AGG | 0.305565 | 2_2:+8036942 | Msa0235190:CDS |
| ATTGGTTGATTAAGAATTCT+TGG | 0.312011 | 2_2:+8037036 | Msa0235190:CDS |
| CAGCAATGGATGATAAAATA+TGG | 0.313356 | 2_2:+8035510 | Msa0235190:CDS |
| GAGTTTATTGCTTCACATAC+TGG | 0.326687 | 2_2:+8035675 | Msa0235190:CDS |
| AGAATTCTTGGGGTAAAGAT+TGG | 0.334902 | 2_2:+8037048 | Msa0235190:CDS |
| GTCTGACTACCTTCTTGATA+TGG | 0.336745 | 2_2:-8036774 | None:intergenic |
| GACAGTGTTCTTGACATGAT+TGG | 0.347406 | 2_2:-8035462 | None:intergenic |
| TTGGTTGATTAAGAATTCTT+GGG | 0.374775 | 2_2:+8037037 | Msa0235190:CDS |
| GAATTCTTGGGGTAAAGATT+GGG | 0.376941 | 2_2:+8037049 | Msa0235190:CDS |
| TGGGTGTGGTGGAGGTAATA+TGG | 0.384068 | 2_2:+8036695 | Msa0235190:CDS |
| CTCATTATCTGAGCAACAAT+TGG | 0.401955 | 2_2:+8036650 | Msa0235190:CDS |
| ACTGCAATGCCAACTGATAC+TGG | 0.406208 | 2_2:-8036900 | None:intergenic |
| TAGCAGTTGTTGTTCATCAT+TGG | 0.413217 | 2_2:-8036859 | None:intergenic |
| TGTTTGCATGATTATCTTGT+GGG | 0.419752 | 2_2:+8035428 | Msa0235190:CDS |
| GGTTTGTATTATATATTTGA+AGG | 0.448659 | 2_2:-8036724 | None:intergenic |
| ACAGTGTTCTTGACATGATT+GGG | 0.450300 | 2_2:-8035461 | None:intergenic |
| GGTAAAGATTGGGGTGAAGA+AGG | 0.460104 | 2_2:+8037059 | Msa0235190:CDS |
| TGATGAATTTCAACATTACA+TGG | 0.464191 | 2_2:+8036926 | Msa0235190:CDS |
| TGTCTCACTAACAATACCTT+GGG | 0.465163 | 2_2:-8036745 | None:intergenic |
| GCAGTTACTGCAGTTGGTTA+CGG | 0.478465 | 2_2:+8036990 | Msa0235190:CDS |
| TACTGCAACTGACCTCATCT+TGG | 0.480728 | 2_2:-8035727 | None:intergenic |
| CTGTCTCACTAACAATACCT+TGG | 0.493668 | 2_2:-8036746 | None:intergenic |
| AGTTGTTGTTCATCATTGGC+AGG | 0.496843 | 2_2:-8036855 | None:intergenic |
| AACCATGCAGTTACTGCAGT+TGG | 0.506721 | 2_2:+8036984 | Msa0235190:CDS |
| AGGTTACATGAAGTTGTTGA+GGG | 0.508816 | 2_2:+8037079 | Msa0235190:CDS |
| TGCAGCAATGATTGACCTCC+TGG | 0.511498 | 2_2:-8037113 | None:intergenic |
| CTGTTTGCATGATTATCTTG+TGG | 0.513337 | 2_2:+8035427 | Msa0235190:CDS |
| TTGAGGGAAAGTGGTGAACC+AGG | 0.520538 | 2_2:+8037095 | Msa0235190:CDS |
| AATTCTTGGGGTAAAGATTG+GGG | 0.530447 | 2_2:+8037050 | Msa0235190:CDS |
| GGTTACGGTGTAAGTGAAGA+TGG | 0.532156 | 2_2:+8037005 | Msa0235190:CDS |
| GTGAAGATGGAACTAAGTAT+TGG | 0.533019 | 2_2:+8037018 | Msa0235190:CDS |
| ATGAAGTTGTTGAGGGAAAG+TGG | 0.542145 | 2_2:+8037086 | Msa0235190:CDS |
| TGCAACTGACCTCATCTTGG+AGG | 0.547643 | 2_2:-8035724 | None:intergenic |
| CAGAACAATGGGTGTGGTGG+AGG | 0.560185 | 2_2:+8036687 | Msa0235190:CDS |
| TACGAATTTCAAAATATCAG+AGG | 0.563458 | 2_2:+8037168 | Msa0235190:CDS |
| AAGGTTACATGAAGTTGTTG+AGG | 0.582698 | 2_2:+8037078 | Msa0235190:CDS |
| ACTGCGATGAACAGAACAAT+GGG | 0.582764 | 2_2:+8036676 | Msa0235190:CDS |
| TGGTTGATTAAGAATTCTTG+GGG | 0.586376 | 2_2:+8037038 | Msa0235190:CDS |
| ACAGATTATCCATATCAAGA+AGG | 0.601748 | 2_2:+8036765 | Msa0235190:CDS |
| GATGTTTATTCAGGAACATG+TGG | 0.602261 | 2_2:+8036951 | Msa0235190:CDS |
| AACCAACTGCAGTAACTGCA+TGG | 0.607601 | 2_2:-8036986 | None:intergenic |
| GTATCAGTTGGCATTGCAGT+CGG | 0.623362 | 2_2:+8036903 | Msa0235190:CDS |
| GATGAATTTCAACATTACAT+GGG | 0.623570 | 2_2:+8036927 | Msa0235190:CDS |
| TTGTTGAAGCACATCAGCAA+TGG | 0.625595 | 2_2:+8035496 | Msa0235190:CDS |
| GACTTTCATCCTCCAAGATG+AGG | 0.628604 | 2_2:+8035715 | Msa0235190:CDS |
| GAACAGAACAATGGGTGTGG+TGG | 0.628748 | 2_2:+8036684 | Msa0235190:CDS |
| GCACAACAACCAGTATCAGT+TGG | 0.635741 | 2_2:+8036891 | Msa0235190:CDS |
| GATGCTGTGAAAATCAAGAC+TGG | 0.646757 | 2_2:+8036618 | Msa0235190:CDS |
| AAATATATAATACAAACCCA+AGG | 0.655643 | 2_2:+8036729 | Msa0235190:CDS |
| TCATCTTGGAGGATGAAAGT+CGG | 0.661178 | 2_2:-8035713 | None:intergenic |
| GACTGCGATGAACAGAACAA+TGG | 0.669619 | 2_2:+8036675 | Msa0235190:CDS |
| GATGAACAGAACAATGGGTG+TGG | 0.700071 | 2_2:+8036681 | Msa0235190:CDS |
| AGGGAAAGTGGTGAACCAGG+AGG | 0.728920 | 2_2:+8037098 | Msa0235190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTGATATAAAATAAAA+TGG | - | chr2_2:8036031-8036050 | None:intergenic | 10.0% |
| !!! | TTATTTAGATTTTTCTTTTT+TGG | - | chr2_2:8036257-8036276 | None:intergenic | 10.0% |
| !!! | AAAGTTACATTTTAATATTA+AGG | + | chr2_2:8036421-8036440 | Msa0235190:intron | 10.0% |
| !! | ATTCGTATAAAAATATTATA+TGG | - | chr2_2:8037155-8037174 | None:intergenic | 10.0% |
| !!! | TTTTGTGATATAAAATAAAA+TGG | - | chr2_2:8036031-8036050 | None:intergenic | 10.0% |
| !!! | TTATTTAGATTTTTCTTTTT+TGG | - | chr2_2:8036257-8036276 | None:intergenic | 10.0% |
| !!! | AAAGTTACATTTTAATATTA+AGG | + | chr2_2:8036421-8036440 | Msa0235190:intron | 10.0% |
| !! | ATTCGTATAAAAATATTATA+TGG | - | chr2_2:8037155-8037174 | None:intergenic | 10.0% |
| !!! | TATTTTTTAATTAGTCATCT+TGG | + | chr2_2:8035864-8035883 | Msa0235190:intron | 15.0% |
| !! | TGATATAAAATAAAATGGAA+TGG | - | chr2_2:8036026-8036045 | None:intergenic | 15.0% |
| !! | AAATATCGAAAAGTTATTTA+AGG | + | chr2_2:8036310-8036329 | Msa0235190:intron | 15.0% |
| !! | ATTTCATTTGATCATTTAAT+TGG | - | chr2_2:8036803-8036822 | None:intergenic | 15.0% |
| !! | GTATAAAAATATTATATGGT+GGG | - | chr2_2:8037151-8037170 | None:intergenic | 15.0% |
| !!! | TTATTTTTCCATTTATATGT+AGG | - | chr2_2:8037292-8037311 | Msa0235200:intron | 15.0% |
| !!! | TATTTTTTAATTAGTCATCT+TGG | + | chr2_2:8035864-8035883 | Msa0235190:intron | 15.0% |
| !! | TGATATAAAATAAAATGGAA+TGG | - | chr2_2:8036026-8036045 | None:intergenic | 15.0% |
| !! | AAATATCGAAAAGTTATTTA+AGG | + | chr2_2:8036310-8036329 | Msa0235190:intron | 15.0% |
| !! | ATTTCATTTGATCATTTAAT+TGG | - | chr2_2:8036803-8036822 | None:intergenic | 15.0% |
| !! | GTATAAAAATATTATATGGT+GGG | - | chr2_2:8037151-8037170 | None:intergenic | 15.0% |
| !!! | TTATTTTTCCATTTATATGT+AGG | - | chr2_2:8037292-8037311 | Msa0235200:intron | 15.0% |
| !!! | ATATTCCAACAAATTTTGAT+TGG | + | chr2_2:8035769-8035788 | Msa0235190:intron | 20.0% |
| !!! | TTTAGATTTTTCTTTTTTGG+TGG | - | chr2_2:8036254-8036273 | None:intergenic | 20.0% |
| !!! | AATAACTTTTCGATATTTGA+TGG | - | chr2_2:8036308-8036327 | None:intergenic | 20.0% |
| !!! | TATCATTCAATATGTTTTGT+AGG | + | chr2_2:8036568-8036587 | Msa0235190:intron | 20.0% |
| !! | GGTTTGTATTATATATTTGA+AGG | - | chr2_2:8036727-8036746 | None:intergenic | 20.0% |
| !! | AAATATATAATACAAACCCA+AGG | + | chr2_2:8036729-8036748 | Msa0235190:CDS | 20.0% |
| !! | CGTATAAAAATATTATATGG+TGG | - | chr2_2:8037152-8037171 | None:intergenic | 20.0% |
| !!! | ATATTCCAACAAATTTTGAT+TGG | + | chr2_2:8035769-8035788 | Msa0235190:intron | 20.0% |
| !!! | TTTAGATTTTTCTTTTTTGG+TGG | - | chr2_2:8036254-8036273 | None:intergenic | 20.0% |
| !!! | AATAACTTTTCGATATTTGA+TGG | - | chr2_2:8036308-8036327 | None:intergenic | 20.0% |
| !!! | TATCATTCAATATGTTTTGT+AGG | + | chr2_2:8036568-8036587 | Msa0235190:intron | 20.0% |
| !! | GGTTTGTATTATATATTTGA+AGG | - | chr2_2:8036727-8036746 | None:intergenic | 20.0% |
| !! | AAATATATAATACAAACCCA+AGG | + | chr2_2:8036729-8036748 | Msa0235190:CDS | 20.0% |
| !! | CGTATAAAAATATTATATGG+TGG | - | chr2_2:8037152-8037171 | None:intergenic | 20.0% |
| ! | TTAAATCAGAGTATGGATTT+AGG | - | chr2_2:8035647-8035666 | None:intergenic | 25.0% |
| ! | TATGCTTCATTAAAAGTTCT+CGG | - | chr2_2:8036066-8036085 | None:intergenic | 25.0% |
| ! | ACAATGCATAAAAATATGCA+AGG | + | chr2_2:8036206-8036225 | Msa0235190:intron | 25.0% |
| ! | TGATGAATTTCAACATTACA+TGG | + | chr2_2:8036926-8036945 | Msa0235190:CDS | 25.0% |
| ! | GATGAATTTCAACATTACAT+GGG | + | chr2_2:8036927-8036946 | Msa0235190:CDS | 25.0% |
| ! | ATTGGTTGATTAAGAATTCT+TGG | + | chr2_2:8037036-8037055 | Msa0235190:CDS | 25.0% |
| ! | TTGGTTGATTAAGAATTCTT+GGG | + | chr2_2:8037037-8037056 | Msa0235190:CDS | 25.0% |
| ! | TACGAATTTCAAAATATCAG+AGG | + | chr2_2:8037168-8037187 | Msa0235190:CDS | 25.0% |
| ! | AAATTCTGCCTACATATAAA+TGG | + | chr2_2:8037281-8037300 | Msa0235190:three_prime_UTR | 25.0% |
| ! | TTAAATCAGAGTATGGATTT+AGG | - | chr2_2:8035647-8035666 | None:intergenic | 25.0% |
| ! | TATGCTTCATTAAAAGTTCT+CGG | - | chr2_2:8036066-8036085 | None:intergenic | 25.0% |
| ! | ACAATGCATAAAAATATGCA+AGG | + | chr2_2:8036206-8036225 | Msa0235190:intron | 25.0% |
| ! | TGATGAATTTCAACATTACA+TGG | + | chr2_2:8036926-8036945 | Msa0235190:CDS | 25.0% |
| ! | GATGAATTTCAACATTACAT+GGG | + | chr2_2:8036927-8036946 | Msa0235190:CDS | 25.0% |
| ! | ATTGGTTGATTAAGAATTCT+TGG | + | chr2_2:8037036-8037055 | Msa0235190:CDS | 25.0% |
| ! | TTGGTTGATTAAGAATTCTT+GGG | + | chr2_2:8037037-8037056 | Msa0235190:CDS | 25.0% |
| ! | TACGAATTTCAAAATATCAG+AGG | + | chr2_2:8037168-8037187 | Msa0235190:CDS | 25.0% |
| ! | AAATTCTGCCTACATATAAA+TGG | + | chr2_2:8037281-8037300 | Msa0235190:three_prime_UTR | 25.0% |
| TGTTTGCATGATTATCTTGT+GGG | + | chr2_2:8035428-8035447 | Msa0235190:CDS | 30.0% | |
| CAGCAATGGATGATAAAATA+TGG | + | chr2_2:8035510-8035529 | Msa0235190:CDS | 30.0% | |
| ATAGAGAATTTCAACAATGC+TGG | + | chr2_2:8035600-8035619 | Msa0235190:intron | 30.0% | |
| TCACTAGTTAAATCAGAGTA+TGG | - | chr2_2:8035654-8035673 | None:intergenic | 30.0% | |
| !! | ATATCATCATTCAGGTTGAA+GGG | - | chr2_2:8035753-8035772 | None:intergenic | 30.0% |
| !! | AATATCATCATTCAGGTTGA+AGG | - | chr2_2:8035754-8035773 | None:intergenic | 30.0% |
| TTGTTGGAATATCATCATTC+AGG | - | chr2_2:8035761-8035780 | None:intergenic | 30.0% | |
| TGTCTCCAATCAAAATTTGT+TGG | - | chr2_2:8035777-8035796 | None:intergenic | 30.0% | |
| !!! | AATTTTGATTGGAGACAACA+AGG | + | chr2_2:8035780-8035799 | Msa0235190:intron | 30.0% |
| TATTGGAGACTTTGTTAGTT+TGG | - | chr2_2:8035923-8035942 | None:intergenic | 30.0% | |
| AACAAAGTCTCCAATATGTT+TGG | + | chr2_2:8035927-8035946 | Msa0235190:intron | 30.0% | |
| ! | CTCCAATATGTTTGGATTTT+CGG | + | chr2_2:8035935-8035954 | Msa0235190:intron | 30.0% |
| TACCGAAAATCCAAACATAT+TGG | - | chr2_2:8035940-8035959 | None:intergenic | 30.0% | |
| ! | TGTTTGGATTTTCGGTATAA+AGG | + | chr2_2:8035943-8035962 | Msa0235190:intron | 30.0% |
| TGATGCGTTTATATGGTATT+TGG | - | chr2_2:8036098-8036117 | None:intergenic | 30.0% | |
| GCATTATTGATGCGTTTATA+TGG | - | chr2_2:8036105-8036124 | None:intergenic | 30.0% | |
| CATAAAAATATGCAAGGTCT+GGG | + | chr2_2:8036212-8036231 | Msa0235190:intron | 30.0% | |
| ATAAAAATATGCAAGGTCTG+GGG | + | chr2_2:8036213-8036232 | Msa0235190:intron | 30.0% | |
| !!! | AGATTTTTCTTTTTTGGTGG+TGG | - | chr2_2:8036251-8036270 | None:intergenic | 30.0% |
| !! | TGTAATTTCTAGCCTTAGAT+AGG | - | chr2_2:8036452-8036471 | None:intergenic | 30.0% |
| ! | TATGTTTTGTAGGATGTTGT+TGG | + | chr2_2:8036578-8036597 | Msa0235190:intron | 30.0% |
| ! | ATGTTTTGTAGGATGTTGTT+GGG | + | chr2_2:8036579-8036598 | Msa0235190:intron | 30.0% |
| ACAGATTATCCATATCAAGA+AGG | + | chr2_2:8036765-8036784 | Msa0235190:CDS | 30.0% | |
| TGGTTGATTAAGAATTCTTG+GGG | + | chr2_2:8037038-8037057 | Msa0235190:CDS | 30.0% | |
| AAGCAAAGAGCTTCATTAAA+AGG | - | chr2_2:8037234-8037253 | Msa0235200:CDS | 30.0% | |
| TGTTTGCATGATTATCTTGT+GGG | + | chr2_2:8035428-8035447 | Msa0235190:CDS | 30.0% | |
| CAGCAATGGATGATAAAATA+TGG | + | chr2_2:8035510-8035529 | Msa0235190:CDS | 30.0% | |
| ATAGAGAATTTCAACAATGC+TGG | + | chr2_2:8035600-8035619 | Msa0235190:intron | 30.0% | |
| TCACTAGTTAAATCAGAGTA+TGG | - | chr2_2:8035654-8035673 | None:intergenic | 30.0% | |
| !! | ATATCATCATTCAGGTTGAA+GGG | - | chr2_2:8035753-8035772 | None:intergenic | 30.0% |
| !! | AATATCATCATTCAGGTTGA+AGG | - | chr2_2:8035754-8035773 | None:intergenic | 30.0% |
| TTGTTGGAATATCATCATTC+AGG | - | chr2_2:8035761-8035780 | None:intergenic | 30.0% | |
| TGTCTCCAATCAAAATTTGT+TGG | - | chr2_2:8035777-8035796 | None:intergenic | 30.0% | |
| !!! | AATTTTGATTGGAGACAACA+AGG | + | chr2_2:8035780-8035799 | Msa0235190:intron | 30.0% |
| TATTGGAGACTTTGTTAGTT+TGG | - | chr2_2:8035923-8035942 | None:intergenic | 30.0% | |
| AACAAAGTCTCCAATATGTT+TGG | + | chr2_2:8035927-8035946 | Msa0235190:intron | 30.0% | |
| ! | CTCCAATATGTTTGGATTTT+CGG | + | chr2_2:8035935-8035954 | Msa0235190:intron | 30.0% |
| TACCGAAAATCCAAACATAT+TGG | - | chr2_2:8035940-8035959 | None:intergenic | 30.0% | |
| ! | TGTTTGGATTTTCGGTATAA+AGG | + | chr2_2:8035943-8035962 | Msa0235190:intron | 30.0% |
| TGATGCGTTTATATGGTATT+TGG | - | chr2_2:8036098-8036117 | None:intergenic | 30.0% | |
| GCATTATTGATGCGTTTATA+TGG | - | chr2_2:8036105-8036124 | None:intergenic | 30.0% | |
| CATAAAAATATGCAAGGTCT+GGG | + | chr2_2:8036212-8036231 | Msa0235190:intron | 30.0% | |
| ATAAAAATATGCAAGGTCTG+GGG | + | chr2_2:8036213-8036232 | Msa0235190:intron | 30.0% | |
| !!! | AGATTTTTCTTTTTTGGTGG+TGG | - | chr2_2:8036251-8036270 | None:intergenic | 30.0% |
| !! | TGTAATTTCTAGCCTTAGAT+AGG | - | chr2_2:8036452-8036471 | None:intergenic | 30.0% |
| ! | TATGTTTTGTAGGATGTTGT+TGG | + | chr2_2:8036578-8036597 | Msa0235190:intron | 30.0% |
| ! | ATGTTTTGTAGGATGTTGTT+GGG | + | chr2_2:8036579-8036598 | Msa0235190:intron | 30.0% |
| ACAGATTATCCATATCAAGA+AGG | + | chr2_2:8036765-8036784 | Msa0235190:CDS | 30.0% | |
| TGGTTGATTAAGAATTCTTG+GGG | + | chr2_2:8037038-8037057 | Msa0235190:CDS | 30.0% | |
| AAGCAAAGAGCTTCATTAAA+AGG | - | chr2_2:8037234-8037253 | Msa0235200:CDS | 30.0% | |
| CTGTTTGCATGATTATCTTG+TGG | + | chr2_2:8035427-8035446 | Msa0235190:CDS | 35.0% | |
| ACAGTGTTCTTGACATGATT+GGG | - | chr2_2:8035464-8035483 | None:intergenic | 35.0% | |
| ! | CTTTTTGCGTTTCTCTAACT+CGG | - | chr2_2:8035556-8035575 | None:intergenic | 35.0% |
| GAGTTTATTGCTTCACATAC+TGG | + | chr2_2:8035675-8035694 | Msa0235190:CDS | 35.0% | |
| TAATTAGTCATCTTGGAGCA+TGG | + | chr2_2:8035871-8035890 | Msa0235190:intron | 35.0% | |
| GGTATAAAGGTTGAATGACA+TGG | + | chr2_2:8035956-8035975 | Msa0235190:intron | 35.0% | |
| AAAAGTTCTCGGAGGATATT+TGG | - | chr2_2:8036055-8036074 | None:intergenic | 35.0% | |
| GCATAAAAATATGCAAGGTC+TGG | + | chr2_2:8036211-8036230 | Msa0235190:intron | 35.0% | |
| GCACAAACACTGATCAAATT+AGG | - | chr2_2:8036364-8036383 | None:intergenic | 35.0% | |
| ATTAAGGAACCACCTATCTA+AGG | + | chr2_2:8036437-8036456 | Msa0235190:intron | 35.0% | |
| !! | AATTTCTAGCCTTAGATAGG+TGG | - | chr2_2:8036449-8036468 | None:intergenic | 35.0% |
| CTCATTATCTGAGCAACAAT+TGG | + | chr2_2:8036650-8036669 | Msa0235190:CDS | 35.0% | |
| TGTCTCACTAACAATACCTT+GGG | - | chr2_2:8036748-8036767 | None:intergenic | 35.0% | |
| ! | TAGCAGTTGTTGTTCATCAT+TGG | - | chr2_2:8036862-8036881 | None:intergenic | 35.0% |
| TACATGGGAGATGTTTATTC+AGG | + | chr2_2:8036942-8036961 | Msa0235190:CDS | 35.0% | |
| GATGTTTATTCAGGAACATG+TGG | + | chr2_2:8036951-8036970 | Msa0235190:CDS | 35.0% | |
| GTGAAGATGGAACTAAGTAT+TGG | + | chr2_2:8037018-8037037 | Msa0235190:CDS | 35.0% | |
| AGAATTCTTGGGGTAAAGAT+TGG | + | chr2_2:8037048-8037067 | Msa0235190:CDS | 35.0% | |
| GAATTCTTGGGGTAAAGATT+GGG | + | chr2_2:8037049-8037068 | Msa0235190:CDS | 35.0% | |
| AATTCTTGGGGTAAAGATTG+GGG | + | chr2_2:8037050-8037069 | Msa0235190:CDS | 35.0% | |
| AAGGTTACATGAAGTTGTTG+AGG | + | chr2_2:8037078-8037097 | Msa0235190:CDS | 35.0% | |
| AGGTTACATGAAGTTGTTGA+GGG | + | chr2_2:8037079-8037098 | Msa0235190:CDS | 35.0% | |
| CTGTTTGCATGATTATCTTG+TGG | + | chr2_2:8035427-8035446 | Msa0235190:CDS | 35.0% | |
| ACAGTGTTCTTGACATGATT+GGG | - | chr2_2:8035464-8035483 | None:intergenic | 35.0% | |
| ! | CTTTTTGCGTTTCTCTAACT+CGG | - | chr2_2:8035556-8035575 | None:intergenic | 35.0% |
| GAGTTTATTGCTTCACATAC+TGG | + | chr2_2:8035675-8035694 | Msa0235190:CDS | 35.0% | |
| TAATTAGTCATCTTGGAGCA+TGG | + | chr2_2:8035871-8035890 | Msa0235190:intron | 35.0% | |
| GGTATAAAGGTTGAATGACA+TGG | + | chr2_2:8035956-8035975 | Msa0235190:intron | 35.0% | |
| AAAAGTTCTCGGAGGATATT+TGG | - | chr2_2:8036055-8036074 | None:intergenic | 35.0% | |
| GCATAAAAATATGCAAGGTC+TGG | + | chr2_2:8036211-8036230 | Msa0235190:intron | 35.0% | |
| GCACAAACACTGATCAAATT+AGG | - | chr2_2:8036364-8036383 | None:intergenic | 35.0% | |
| ATTAAGGAACCACCTATCTA+AGG | + | chr2_2:8036437-8036456 | Msa0235190:intron | 35.0% | |
| !! | AATTTCTAGCCTTAGATAGG+TGG | - | chr2_2:8036449-8036468 | None:intergenic | 35.0% |
| CTCATTATCTGAGCAACAAT+TGG | + | chr2_2:8036650-8036669 | Msa0235190:CDS | 35.0% | |
| TGTCTCACTAACAATACCTT+GGG | - | chr2_2:8036748-8036767 | None:intergenic | 35.0% | |
| ! | TAGCAGTTGTTGTTCATCAT+TGG | - | chr2_2:8036862-8036881 | None:intergenic | 35.0% |
| TACATGGGAGATGTTTATTC+AGG | + | chr2_2:8036942-8036961 | Msa0235190:CDS | 35.0% | |
| GATGTTTATTCAGGAACATG+TGG | + | chr2_2:8036951-8036970 | Msa0235190:CDS | 35.0% | |
| GTGAAGATGGAACTAAGTAT+TGG | + | chr2_2:8037018-8037037 | Msa0235190:CDS | 35.0% | |
| AGAATTCTTGGGGTAAAGAT+TGG | + | chr2_2:8037048-8037067 | Msa0235190:CDS | 35.0% | |
| GAATTCTTGGGGTAAAGATT+GGG | + | chr2_2:8037049-8037068 | Msa0235190:CDS | 35.0% | |
| AATTCTTGGGGTAAAGATTG+GGG | + | chr2_2:8037050-8037069 | Msa0235190:CDS | 35.0% | |
| AAGGTTACATGAAGTTGTTG+AGG | + | chr2_2:8037078-8037097 | Msa0235190:CDS | 35.0% | |
| AGGTTACATGAAGTTGTTGA+GGG | + | chr2_2:8037079-8037098 | Msa0235190:CDS | 35.0% | |
| GACAGTGTTCTTGACATGAT+TGG | - | chr2_2:8035465-8035484 | None:intergenic | 40.0% | |
| TTGTTGAAGCACATCAGCAA+TGG | + | chr2_2:8035496-8035515 | Msa0235190:CDS | 40.0% | |
| GGTAACAAGAGTTACAAGCT+TGG | + | chr2_2:8035621-8035640 | Msa0235190:intron | 40.0% | |
| TCATCTTGGAGGATGAAAGT+CGG | - | chr2_2:8035716-8035735 | None:intergenic | 40.0% | |
| GTTACCGATGTTAAAGACCA+AGG | + | chr2_2:8035807-8035826 | Msa0235190:intron | 40.0% | |
| ! | ACTGCCTTGGTCTTTAACAT+CGG | - | chr2_2:8035814-8035833 | None:intergenic | 40.0% |
| GCTTCATTAAAAGTTCTCGG+AGG | - | chr2_2:8036063-8036082 | None:intergenic | 40.0% | |
| !!! | TTTTCTTTTTTGGTGGTGGC+CGG | - | chr2_2:8036247-8036266 | None:intergenic | 40.0% |
| GATGCTGTGAAAATCAAGAC+TGG | + | chr2_2:8036618-8036637 | Msa0235190:CDS | 40.0% | |
| ACTGCGATGAACAGAACAAT+GGG | + | chr2_2:8036676-8036695 | Msa0235190:CDS | 40.0% | |
| CTGTCTCACTAACAATACCT+TGG | - | chr2_2:8036749-8036768 | None:intergenic | 40.0% | |
| GTCTGACTACCTTCTTGATA+TGG | - | chr2_2:8036777-8036796 | None:intergenic | 40.0% | |
| ! | AGTTGTTGTTCATCATTGGC+AGG | - | chr2_2:8036858-8036877 | None:intergenic | 40.0% |
| ATGAAGTTGTTGAGGGAAAG+TGG | + | chr2_2:8037086-8037105 | Msa0235190:CDS | 40.0% | |
| GACAGTGTTCTTGACATGAT+TGG | - | chr2_2:8035465-8035484 | None:intergenic | 40.0% | |
| TTGTTGAAGCACATCAGCAA+TGG | + | chr2_2:8035496-8035515 | Msa0235190:CDS | 40.0% | |
| GGTAACAAGAGTTACAAGCT+TGG | + | chr2_2:8035621-8035640 | Msa0235190:intron | 40.0% | |
| TCATCTTGGAGGATGAAAGT+CGG | - | chr2_2:8035716-8035735 | None:intergenic | 40.0% | |
| GTTACCGATGTTAAAGACCA+AGG | + | chr2_2:8035807-8035826 | Msa0235190:intron | 40.0% | |
| ! | ACTGCCTTGGTCTTTAACAT+CGG | - | chr2_2:8035814-8035833 | None:intergenic | 40.0% |
| GCTTCATTAAAAGTTCTCGG+AGG | - | chr2_2:8036063-8036082 | None:intergenic | 40.0% | |
| !!! | TTTTCTTTTTTGGTGGTGGC+CGG | - | chr2_2:8036247-8036266 | None:intergenic | 40.0% |
| GATGCTGTGAAAATCAAGAC+TGG | + | chr2_2:8036618-8036637 | Msa0235190:CDS | 40.0% | |
| ACTGCGATGAACAGAACAAT+GGG | + | chr2_2:8036676-8036695 | Msa0235190:CDS | 40.0% | |
| CTGTCTCACTAACAATACCT+TGG | - | chr2_2:8036749-8036768 | None:intergenic | 40.0% | |
| GTCTGACTACCTTCTTGATA+TGG | - | chr2_2:8036777-8036796 | None:intergenic | 40.0% | |
| ! | AGTTGTTGTTCATCATTGGC+AGG | - | chr2_2:8036858-8036877 | None:intergenic | 40.0% |
| ATGAAGTTGTTGAGGGAAAG+TGG | + | chr2_2:8037086-8037105 | Msa0235190:CDS | 40.0% | |
| GACTTTCATCCTCCAAGATG+AGG | + | chr2_2:8035715-8035734 | Msa0235190:CDS | 45.0% | |
| TACTGCAACTGACCTCATCT+TGG | - | chr2_2:8035730-8035749 | None:intergenic | 45.0% | |
| GTTAAAGACCAAGGCAGTTG+TGG | + | chr2_2:8035816-8035835 | Msa0235190:intron | 45.0% | |
| AAGACATACCACAACTGCCT+TGG | - | chr2_2:8035827-8035846 | None:intergenic | 45.0% | |
| !!! | TTTCTTTTTTGGTGGTGGCC+GGG | - | chr2_2:8036246-8036265 | None:intergenic | 45.0% |
| ! | TTGTTGGGCATTTTCAGTCG+TGG | + | chr2_2:8036594-8036613 | Msa0235190:CDS | 45.0% |
| GACTGCGATGAACAGAACAA+TGG | + | chr2_2:8036675-8036694 | Msa0235190:CDS | 45.0% | |
| GATGAACAGAACAATGGGTG+TGG | + | chr2_2:8036681-8036700 | Msa0235190:CDS | 45.0% | |
| GCACAACAACCAGTATCAGT+TGG | + | chr2_2:8036891-8036910 | Msa0235190:CDS | 45.0% | |
| ACTGCAATGCCAACTGATAC+TGG | - | chr2_2:8036903-8036922 | None:intergenic | 45.0% | |
| GTATCAGTTGGCATTGCAGT+CGG | + | chr2_2:8036903-8036922 | Msa0235190:CDS | 45.0% | |
| AACCATGCAGTTACTGCAGT+TGG | + | chr2_2:8036984-8037003 | Msa0235190:CDS | 45.0% | |
| AACCAACTGCAGTAACTGCA+TGG | - | chr2_2:8036989-8037008 | None:intergenic | 45.0% | |
| GCAGTTACTGCAGTTGGTTA+CGG | + | chr2_2:8036990-8037009 | Msa0235190:CDS | 45.0% | |
| GGTTACGGTGTAAGTGAAGA+TGG | + | chr2_2:8037005-8037024 | Msa0235190:CDS | 45.0% | |
| GGTAAAGATTGGGGTGAAGA+AGG | + | chr2_2:8037059-8037078 | Msa0235190:CDS | 45.0% | |
| GACTTTCATCCTCCAAGATG+AGG | + | chr2_2:8035715-8035734 | Msa0235190:CDS | 45.0% | |
| TACTGCAACTGACCTCATCT+TGG | - | chr2_2:8035730-8035749 | None:intergenic | 45.0% | |
| GTTAAAGACCAAGGCAGTTG+TGG | + | chr2_2:8035816-8035835 | Msa0235190:intron | 45.0% | |
| AAGACATACCACAACTGCCT+TGG | - | chr2_2:8035827-8035846 | None:intergenic | 45.0% | |
| !!! | TTTCTTTTTTGGTGGTGGCC+GGG | - | chr2_2:8036246-8036265 | None:intergenic | 45.0% |
| ! | TTGTTGGGCATTTTCAGTCG+TGG | + | chr2_2:8036594-8036613 | Msa0235190:CDS | 45.0% |
| GACTGCGATGAACAGAACAA+TGG | + | chr2_2:8036675-8036694 | Msa0235190:CDS | 45.0% | |
| GATGAACAGAACAATGGGTG+TGG | + | chr2_2:8036681-8036700 | Msa0235190:CDS | 45.0% | |
| GCACAACAACCAGTATCAGT+TGG | + | chr2_2:8036891-8036910 | Msa0235190:CDS | 45.0% | |
| ACTGCAATGCCAACTGATAC+TGG | - | chr2_2:8036903-8036922 | None:intergenic | 45.0% | |
| GTATCAGTTGGCATTGCAGT+CGG | + | chr2_2:8036903-8036922 | Msa0235190:CDS | 45.0% | |
| AACCATGCAGTTACTGCAGT+TGG | + | chr2_2:8036984-8037003 | Msa0235190:CDS | 45.0% | |
| AACCAACTGCAGTAACTGCA+TGG | - | chr2_2:8036989-8037008 | None:intergenic | 45.0% | |
| GCAGTTACTGCAGTTGGTTA+CGG | + | chr2_2:8036990-8037009 | Msa0235190:CDS | 45.0% | |
| GGTTACGGTGTAAGTGAAGA+TGG | + | chr2_2:8037005-8037024 | Msa0235190:CDS | 45.0% | |
| GGTAAAGATTGGGGTGAAGA+AGG | + | chr2_2:8037059-8037078 | Msa0235190:CDS | 45.0% | |
| !! | AATAATAAATATAAACATAA+TGG | + | chr2_2:8036183-8036202 | Msa0235190:intron | 5.0% |
| !! | AATAATAAATATAAACATAA+TGG | + | chr2_2:8036183-8036202 | Msa0235190:intron | 5.0% |
| TGCAACTGACCTCATCTTGG+AGG | - | chr2_2:8035727-8035746 | None:intergenic | 50.0% | |
| !!! | TTCTTTTTTGGTGGTGGCCG+GGG | - | chr2_2:8036245-8036264 | None:intergenic | 50.0% |
| GAACAGAACAATGGGTGTGG+TGG | + | chr2_2:8036684-8036703 | Msa0235190:CDS | 50.0% | |
| ! | TGGGTGTGGTGGAGGTAATA+TGG | + | chr2_2:8036695-8036714 | Msa0235190:CDS | 50.0% |
| TTGAGGGAAAGTGGTGAACC+AGG | + | chr2_2:8037095-8037114 | Msa0235190:CDS | 50.0% | |
| TGCAGCAATGATTGACCTCC+TGG | - | chr2_2:8037116-8037135 | None:intergenic | 50.0% | |
| TGCAACTGACCTCATCTTGG+AGG | - | chr2_2:8035727-8035746 | None:intergenic | 50.0% | |
| !!! | TTCTTTTTTGGTGGTGGCCG+GGG | - | chr2_2:8036245-8036264 | None:intergenic | 50.0% |
| GAACAGAACAATGGGTGTGG+TGG | + | chr2_2:8036684-8036703 | Msa0235190:CDS | 50.0% | |
| ! | TGGGTGTGGTGGAGGTAATA+TGG | + | chr2_2:8036695-8036714 | Msa0235190:CDS | 50.0% |
| TTGAGGGAAAGTGGTGAACC+AGG | + | chr2_2:8037095-8037114 | Msa0235190:CDS | 50.0% | |
| TGCAGCAATGATTGACCTCC+TGG | - | chr2_2:8037116-8037135 | None:intergenic | 50.0% | |
| CAGAACAATGGGTGTGGTGG+AGG | + | chr2_2:8036687-8036706 | Msa0235190:CDS | 55.0% | |
| AGGGAAAGTGGTGAACCAGG+AGG | + | chr2_2:8037098-8037117 | Msa0235190:CDS | 55.0% | |
| CAGAACAATGGGTGTGGTGG+AGG | + | chr2_2:8036687-8036706 | Msa0235190:CDS | 55.0% | |
| AGGGAAAGTGGTGAACCAGG+AGG | + | chr2_2:8037098-8037117 | Msa0235190:CDS | 55.0% | |
| ! | AAGGTCTGGGGTTCGAACCC+CGG | + | chr2_2:8036225-8036244 | Msa0235190:intron | 60.0% |
| ! | AAGGTCTGGGGTTCGAACCC+CGG | + | chr2_2:8036225-8036244 | Msa0235190:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 8035411 | 8037342 | 8035411 | ID=Msa0235190;Name=Msa0235190 |
| chr2_2 | mRNA | 8035411 | 8037342 | 8035411 | ID=Msa0235190-mRNA-1;Parent=Msa0235190;Name=Msa0235190-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0.33|1|1|1|3|134|276 |
| chr2_2 | exon | 8035411 | 8035556 | 8035411 | ID=Msa0235190-mRNA-1:exon:3463;Parent=Msa0235190-mRNA-1 |
| chr2_2 | exon | 8035671 | 8035736 | 8035671 | ID=Msa0235190-mRNA-1:exon:3464;Parent=Msa0235190-mRNA-1 |
| chr2_2 | exon | 8036590 | 8037342 | 8036590 | ID=Msa0235190-mRNA-1:exon:3465;Parent=Msa0235190-mRNA-1 |
| chr2_2 | CDS | 8035411 | 8035556 | 8035411 | ID=Msa0235190-mRNA-1:cds;Parent=Msa0235190-mRNA-1 |
| chr2_2 | CDS | 8035671 | 8035736 | 8035671 | ID=Msa0235190-mRNA-1:cds;Parent=Msa0235190-mRNA-1 |
| chr2_2 | CDS | 8036590 | 8037208 | 8036590 | ID=Msa0235190-mRNA-1:cds;Parent=Msa0235190-mRNA-1 |
| chr2_2 | three_prime_UTR | 8037209 | 8037342 | 8037209 | ID=Msa0235190-mRNA-1:three_prime_utr;Parent=Msa0235190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
