Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273570 | XP_003593765.1 | 89.956 | 229 | 18 | 2 | 1 | 225 | 137 | 364 | 7.71e-140 | 406 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273570 | sp|Q9FJ47|SAG12_ARATH | 53.917 | 217 | 95 | 2 | 14 | 225 | 130 | 346 | 7.68e-79 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273570 | G7ILI6 | 89.956 | 229 | 18 | 2 | 1 | 225 | 137 | 364 | 3.68e-140 | 406 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021460 | Msa0273570 | 0.837531 | 4.919598e-57 | -8.615850e-47 |
| Msa0032500 | Msa0273570 | 0.809898 | 1.506793e-50 | -8.615850e-47 |
| Msa0033340 | Msa0273570 | 0.824922 | 6.207195e-54 | -8.615850e-47 |
| Msa0055690 | Msa0273570 | 0.805230 | 1.475813e-49 | -8.615850e-47 |
| Msa0055730 | Msa0273570 | 0.809780 | 1.598026e-50 | -8.615850e-47 |
| Msa0109970 | Msa0273570 | 0.800524 | 1.384138e-48 | -8.615850e-47 |
| Msa0142230 | Msa0273570 | 0.827150 | 1.834256e-54 | -8.615850e-47 |
| Msa0156170 | Msa0273570 | 0.807886 | 4.059384e-50 | -8.615850e-47 |
| Msa0193010 | Msa0273570 | 0.840975 | 6.288613e-58 | -8.615850e-47 |
| Msa0211680 | Msa0273570 | 0.835685 | 1.452878e-56 | -8.615850e-47 |
| Msa0235190 | Msa0273570 | 0.877199 | 7.610104e-69 | -8.615850e-47 |
| Msa0273560 | Msa0273570 | 0.865485 | 5.706575e-65 | -8.615850e-47 |
| Msa0273570 | Msa0273580 | 0.894830 | 1.705053e-75 | -8.615850e-47 |
| Msa0273570 | Msa0274520 | 0.803009 | 4.277532e-49 | -8.615850e-47 |
| Msa0273570 | Msa0313780 | 0.845871 | 3.099664e-59 | -8.615850e-47 |
| Msa0273570 | Msa0313920 | 0.854930 | 8.867260e-62 | -8.615850e-47 |
| Msa0273570 | Msa0314160 | 0.814422 | 1.553170e-51 | -8.615850e-47 |
| Msa0273570 | Msa0352000 | 0.836478 | 9.141462e-57 | -8.615850e-47 |
| Msa0273570 | Msa0352010 | 0.835823 | 1.341048e-56 | -8.615850e-47 |
| Msa0273570 | Msa0363980 | 0.854697 | 1.035676e-61 | -8.615850e-47 |
| Msa0273570 | Msa0365810 | 0.809277 | 2.048483e-50 | -8.615850e-47 |
| Msa0273570 | Msa0452000 | 0.806761 | 7.030815e-50 | -8.615850e-47 |
| Msa0273570 | Msa0452410 | 0.831426 | 1.680261e-55 | -8.615850e-47 |
| Msa0273570 | Msa0458700 | 0.843121 | 1.702406e-58 | -8.615850e-47 |
| Msa0273570 | Msa0512420 | 0.812375 | 4.374944e-51 | -8.615850e-47 |
| Msa0273570 | Msa0533290 | 0.858120 | 1.024763e-62 | -8.615850e-47 |
| Msa0273570 | Msa0533430 | 0.861674 | 8.693332e-64 | -8.615850e-47 |
| Msa0273570 | Msa0555730 | 0.803863 | 2.845706e-49 | -8.615850e-47 |
| Msa0273570 | Msa0580610 | 0.876987 | 9.017425e-69 | -8.615850e-47 |
| Msa0273570 | Msa0584130 | 0.831870 | 1.306019e-55 | -8.615850e-47 |
| Msa0273570 | Msa0594430 | 0.801536 | 8.596526e-49 | -8.615850e-47 |
| Msa0273570 | Msa0629850 | 0.841513 | 4.541669e-58 | -8.615850e-47 |
| Msa0273570 | Msa0629880 | 0.829010 | 6.537594e-55 | -8.615850e-47 |
| Msa0273570 | Msa0629890 | 0.810456 | 1.142439e-50 | -8.615850e-47 |
| Msa0273570 | Msa0629930 | 0.819646 | 1.041121e-52 | -8.615850e-47 |
| Msa0273570 | Msa0629940 | 0.825404 | 4.775879e-54 | -8.615850e-47 |
| Msa0273570 | Msa0641900 | 0.811631 | 6.358012e-51 | -8.615850e-47 |
| Msa0273570 | Msa0661870 | 0.817516 | 3.167416e-52 | -8.615850e-47 |
| Msa0273570 | Msa0702870 | 0.803924 | 2.762898e-49 | -8.615850e-47 |
| Msa0273570 | Msa0754180 | 0.834008 | 3.841309e-56 | -8.615850e-47 |
| Msa0273570 | Msa0773610 | 0.805422 | 1.344960e-49 | -8.615850e-47 |
| Msa0273570 | Msa0784580 | 0.828280 | 9.815913e-55 | -8.615850e-47 |
| Msa0273570 | Msa0808180 | 0.835308 | 1.810314e-56 | -8.615850e-47 |
| Msa0273570 | Msa0815320 | 0.850071 | 2.152310e-60 | -8.615850e-47 |
| Msa0273570 | Msa0818010 | 0.872383 | 3.317555e-67 | -8.615850e-47 |
| Msa0273570 | Msa0818030 | 0.831865 | 1.309999e-55 | -8.615850e-47 |
| Msa0273570 | Msa0858360 | 0.835815 | 1.346841e-56 | -8.615850e-47 |
| Msa0273570 | Msa0865390 | 0.817730 | 2.833434e-52 | -8.615850e-47 |
| Msa0273570 | Msa0883370 | 0.843590 | 1.275994e-58 | -8.615850e-47 |
| Msa0273570 | Msa0884920 | 0.836906 | 7.111932e-57 | -8.615850e-47 |
| Msa0273570 | Msa0898350 | 0.829789 | 4.230084e-55 | -8.615850e-47 |
| Msa0273570 | Msa0898370 | 0.832128 | 1.127851e-55 | -8.615850e-47 |
| Msa0273570 | Msa0902020 | 0.800562 | 1.359622e-48 | -8.615850e-47 |
| Msa0273570 | Msa0912370 | 0.810756 | 9.840873e-51 | -8.615850e-47 |
| Msa0273570 | Msa0912500 | 0.829782 | 4.244843e-55 | -8.615850e-47 |
| Msa0273570 | Msa0924370 | 0.815904 | 7.277268e-52 | -8.615850e-47 |
| Msa0273570 | Msa0940090 | 0.835434 | 1.682350e-56 | -8.615850e-47 |
| Msa0273570 | Msa0957640 | 0.803093 | 4.108853e-49 | -8.615850e-47 |
| Msa0273570 | Msa0963310 | 0.804731 | 1.876170e-49 | -8.615850e-47 |
| Msa0273570 | Msa1002300 | 0.824796 | 6.647525e-54 | -8.615850e-47 |
| Msa0273570 | Msa1006250 | 0.861960 | 7.104079e-64 | -8.615850e-47 |
| Msa0273570 | Msa1006270 | 0.805373 | 1.377208e-49 | -8.615850e-47 |
| Msa0273570 | Msa1020720 | 0.838067 | 3.582596e-57 | -8.615850e-47 |
| Msa0273570 | Msa1027240 | 0.876226 | 1.652893e-68 | -8.615850e-47 |
| Msa0273570 | Msa1048490 | 0.826643 | 2.423989e-54 | -8.615850e-47 |
| Msa0273570 | Msa1048510 | 0.806958 | 6.388501e-50 | -8.615850e-47 |
| Msa0273570 | Msa1048610 | 0.801892 | 7.267196e-49 | -8.615850e-47 |
| Msa0273570 | Msa1050480 | 0.827736 | 1.326877e-54 | -8.615850e-47 |
| Msa0273570 | Msa1077950 | 0.811482 | 6.848206e-51 | -8.615850e-47 |
| Msa0273570 | Msa1085100 | 0.800271 | 1.558783e-48 | -8.615850e-47 |
| Msa0273570 | Msa1131820 | 0.813179 | 2.917102e-51 | -8.615850e-47 |
| Msa0273570 | Msa1139410 | 0.821382 | 4.159522e-53 | -8.615850e-47 |
| Msa0273570 | Msa1187060 | 0.814060 | 1.867250e-51 | -8.615850e-47 |
| Msa0273570 | Msa1198090 | 0.828407 | 9.144730e-55 | -8.615850e-47 |
| Msa0273570 | Msa1287560 | 0.837480 | 5.071198e-57 | -8.615850e-47 |
| Msa0273570 | Msa1287700 | 0.817548 | 3.115109e-52 | -8.615850e-47 |
| Msa0273570 | Msa1288000 | 0.844601 | 6.834553e-59 | -8.615850e-47 |
| Msa0273570 | Msa1289280 | 0.812548 | 4.010694e-51 | -8.615850e-47 |
| Msa0273570 | Msa1324780 | 0.819861 | 9.296591e-53 | -8.615850e-47 |
| Msa0273570 | Msa1359820 | 0.824827 | 6.534989e-54 | -8.615850e-47 |
| Msa0273570 | Msa1419010 | 0.812088 | 5.055098e-51 | -8.615850e-47 |
| Msa0273570 | Msa1423990 | 0.854830 | 9.476909e-62 | -8.615850e-47 |
| Msa0273570 | Msa1444370 | 0.880310 | 6.098771e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273570 | MtrunA17_Chr2g0283671 | 89.956 | 229 | 18 | 2 | 1 | 225 | 1 | 228 | 9.92e-144 | 400 |
| Msa0273570 | MtrunA17_Chr4g0060251 | 57.798 | 218 | 85 | 3 | 14 | 224 | 127 | 344 | 3.28e-83 | 251 |
| Msa0273570 | MtrunA17_Chr4g0040881 | 56.561 | 221 | 89 | 3 | 11 | 224 | 124 | 344 | 1.01e-82 | 250 |
| Msa0273570 | MtrunA17_Chr4g0041061 | 56.561 | 221 | 89 | 3 | 11 | 224 | 124 | 344 | 1.12e-82 | 249 |
| Msa0273570 | MtrunA17_Chr4g0041081 | 55.656 | 221 | 91 | 3 | 11 | 224 | 124 | 344 | 1.52e-82 | 249 |
| Msa0273570 | MtrunA17_Chr5g0405751 | 54.545 | 231 | 98 | 3 | 1 | 224 | 113 | 343 | 3.80e-82 | 248 |
| Msa0273570 | MtrunA17_Chr4g0024411 | 54.348 | 230 | 98 | 3 | 2 | 224 | 113 | 342 | 2.49e-81 | 246 |
| Msa0273570 | MtrunA17_Chr4g0041471 | 51.852 | 216 | 98 | 3 | 14 | 223 | 125 | 340 | 2.04e-76 | 234 |
| Msa0273570 | MtrunA17_Chr4g0058081 | 52.778 | 216 | 95 | 4 | 14 | 223 | 128 | 342 | 4.45e-75 | 231 |
| Msa0273570 | MtrunA17_Chr3g0116551 | 52.558 | 215 | 96 | 3 | 15 | 223 | 129 | 343 | 1.68e-74 | 229 |
| Msa0273570 | MtrunA17_Chr4g0040851 | 49.145 | 234 | 109 | 5 | 1 | 225 | 128 | 360 | 3.42e-74 | 228 |
| Msa0273570 | MtrunA17_Chr7g0248391 | 50.455 | 220 | 99 | 4 | 13 | 225 | 122 | 338 | 1.15e-73 | 226 |
| Msa0273570 | MtrunA17_Chr2g0325121 | 48.879 | 223 | 106 | 4 | 8 | 223 | 114 | 335 | 1.83e-71 | 221 |
| Msa0273570 | MtrunA17_Chr3g0144281 | 50.000 | 218 | 102 | 4 | 13 | 224 | 131 | 347 | 3.81e-71 | 220 |
| Msa0273570 | MtrunA17_Chr2g0315491 | 53.425 | 219 | 95 | 3 | 13 | 224 | 122 | 340 | 1.09e-70 | 219 |
| Msa0273570 | MtrunA17_Chr1g0208261 | 52.273 | 220 | 97 | 5 | 11 | 223 | 176 | 394 | 1.88e-69 | 221 |
| Msa0273570 | MtrunA17_Chr4g0053311 | 49.554 | 224 | 105 | 5 | 7 | 223 | 118 | 340 | 7.45e-69 | 215 |
| Msa0273570 | MtrunA17_Chr4g0041481 | 50.000 | 218 | 100 | 5 | 14 | 224 | 124 | 339 | 1.84e-68 | 213 |
| Msa0273570 | MtrunA17_Chr4g0041521 | 50.459 | 218 | 99 | 5 | 14 | 224 | 124 | 339 | 1.96e-68 | 213 |
| Msa0273570 | MtrunA17_Chr3g0142071 | 50.230 | 217 | 101 | 4 | 14 | 224 | 140 | 355 | 2.33e-68 | 216 |
| Msa0273570 | MtrunA17_Chr3g0134231 | 50.431 | 232 | 101 | 7 | 2 | 223 | 133 | 360 | 8.44e-68 | 215 |
| Msa0273570 | MtrunA17_Chr1g0153011 | 50.000 | 222 | 103 | 5 | 9 | 223 | 121 | 341 | 2.65e-66 | 211 |
| Msa0273570 | MtrunA17_Chr2g0319991 | 46.364 | 220 | 111 | 3 | 13 | 225 | 125 | 344 | 3.56e-66 | 207 |
| Msa0273570 | MtrunA17_Chr7g0248811 | 47.511 | 221 | 104 | 4 | 13 | 225 | 120 | 336 | 1.23e-65 | 206 |
| Msa0273570 | MtrunA17_Chr1g0156161 | 48.261 | 230 | 108 | 7 | 1 | 222 | 35 | 261 | 2.87e-65 | 202 |
| Msa0273570 | MtrunA17_Chr2g0311381 | 49.565 | 230 | 98 | 11 | 7 | 225 | 129 | 351 | 8.40e-60 | 191 |
| Msa0273570 | MtrunA17_Chr2g0283661 | 46.667 | 225 | 60 | 5 | 1 | 225 | 108 | 272 | 1.59e-57 | 183 |
| Msa0273570 | MtrunA17_Chr2g0311391 | 48.000 | 225 | 95 | 11 | 14 | 224 | 155 | 371 | 1.97e-54 | 178 |
| Msa0273570 | MtrunA17_Chr2g0283901 | 44.796 | 221 | 112 | 5 | 12 | 224 | 137 | 355 | 2.09e-54 | 181 |
| Msa0273570 | MtrunA17_Chr2g0311471 | 46.789 | 218 | 103 | 7 | 14 | 222 | 130 | 343 | 3.77e-54 | 177 |
| Msa0273570 | MtrunA17_Chr2g0283741 | 40.826 | 218 | 118 | 5 | 15 | 223 | 142 | 357 | 6.36e-50 | 166 |
| Msa0273570 | MtrunA17_Chr1g0199131 | 40.254 | 236 | 117 | 8 | 4 | 218 | 132 | 364 | 2.39e-49 | 165 |
| Msa0273570 | MtrunA17_Chr4g0035551 | 40.541 | 222 | 109 | 6 | 5 | 205 | 122 | 341 | 3.12e-49 | 164 |
| Msa0273570 | MtrunA17_Chr0c27g0493921 | 43.946 | 223 | 108 | 9 | 14 | 225 | 133 | 349 | 8.05e-49 | 163 |
| Msa0273570 | MtrunA17_Chr1g0155781 | 41.629 | 221 | 106 | 7 | 6 | 205 | 127 | 345 | 1.68e-48 | 162 |
| Msa0273570 | MtrunA17_Chr8g0379151 | 42.793 | 222 | 112 | 6 | 12 | 223 | 155 | 371 | 1.59e-47 | 160 |
| Msa0273570 | MtrunA17_Chr4g0070441 | 44.776 | 201 | 98 | 7 | 14 | 203 | 133 | 331 | 2.05e-45 | 154 |
| Msa0273570 | MtrunA17_Chr7g0248421 | 45.806 | 155 | 71 | 4 | 38 | 184 | 57 | 206 | 2.02e-35 | 124 |
| Msa0273570 | MtrunA17_Chr4g0036731 | 35.885 | 209 | 101 | 8 | 5 | 205 | 122 | 305 | 6.58e-32 | 118 |
| Msa0273570 | MtrunA17_Chr7g0248371 | 52.577 | 97 | 46 | 0 | 127 | 223 | 34 | 130 | 4.49e-31 | 112 |
| Msa0273570 | MtrunA17_Chr4g0036281 | 34.272 | 213 | 103 | 8 | 5 | 205 | 122 | 309 | 5.13e-31 | 116 |
| Msa0273570 | MtrunA17_Chr4g0037291 | 33.491 | 212 | 106 | 7 | 5 | 205 | 163 | 350 | 7.64e-31 | 116 |
| Msa0273570 | MtrunA17_Chr7g0271041 | 32.189 | 233 | 123 | 10 | 14 | 216 | 103 | 330 | 4.59e-26 | 103 |
| Msa0273570 | MtrunA17_Chr7g0271031 | 31.092 | 238 | 127 | 9 | 14 | 218 | 147 | 380 | 7.15e-25 | 100 |
| Msa0273570 | MtrunA17_Chr2g0283751 | 38.356 | 146 | 79 | 5 | 15 | 153 | 144 | 285 | 3.98e-24 | 97.4 |
| Msa0273570 | MtrunA17_Chr7g0248661 | 55.405 | 74 | 33 | 0 | 150 | 223 | 2 | 75 | 6.57e-24 | 90.9 |
| Msa0273570 | MtrunA17_Chr1g0156771 | 42.982 | 114 | 57 | 4 | 1 | 106 | 41 | 154 | 5.96e-23 | 90.9 |
| Msa0273570 | MtrunA17_Chr8g0379671 | 33.071 | 127 | 78 | 3 | 51 | 176 | 23 | 143 | 1.34e-14 | 68.9 |
| Msa0273570 | MtrunA17_Chr2g0311091 | 56.863 | 51 | 18 | 1 | 14 | 60 | 134 | 184 | 6.52e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273570 | AT3G49340.1 | 57.547 | 212 | 83 | 3 | 17 | 223 | 130 | 339 | 3.42e-81 | 246 |
| Msa0273570 | AT5G45890.1 | 53.917 | 217 | 95 | 2 | 14 | 225 | 130 | 346 | 7.81e-80 | 243 |
| Msa0273570 | AT2G34080.1 | 55.405 | 222 | 91 | 4 | 8 | 223 | 124 | 343 | 1.79e-79 | 242 |
| Msa0273570 | AT2G27420.1 | 55.217 | 230 | 92 | 5 | 5 | 223 | 117 | 346 | 1.56e-78 | 239 |
| Msa0273570 | AT3G48340.1 | 54.167 | 216 | 92 | 4 | 14 | 223 | 128 | 342 | 1.16e-76 | 235 |
| Msa0273570 | AT5G50260.1 | 51.835 | 218 | 99 | 3 | 12 | 223 | 124 | 341 | 2.38e-75 | 232 |
| Msa0273570 | AT1G29080.1 | 53.812 | 223 | 94 | 5 | 8 | 223 | 124 | 344 | 2.62e-74 | 229 |
| Msa0273570 | AT1G29090.1 | 56.604 | 212 | 83 | 5 | 19 | 223 | 144 | 353 | 3.59e-74 | 229 |
| Msa0273570 | AT1G20850.1 | 52.074 | 217 | 97 | 4 | 14 | 224 | 138 | 353 | 1.66e-73 | 227 |
| Msa0273570 | AT3G19390.1 | 52.679 | 224 | 98 | 5 | 8 | 224 | 123 | 345 | 2.66e-73 | 229 |
| Msa0273570 | AT5G43060.1 | 51.131 | 221 | 101 | 4 | 9 | 223 | 133 | 352 | 9.86e-72 | 226 |
| Msa0273570 | AT3G48350.1 | 51.376 | 218 | 99 | 4 | 14 | 224 | 126 | 343 | 1.73e-71 | 222 |
| Msa0273570 | AT4G35350.1 | 49.784 | 231 | 107 | 5 | 2 | 224 | 123 | 352 | 3.10e-71 | 221 |
| Msa0273570 | AT4G23520.1 | 51.598 | 219 | 98 | 5 | 12 | 223 | 131 | 348 | 9.30e-71 | 220 |
| Msa0273570 | AT4G36880.1 | 50.000 | 218 | 101 | 5 | 13 | 223 | 144 | 360 | 2.59e-70 | 219 |
| Msa0273570 | AT4G11310.1 | 48.182 | 220 | 105 | 5 | 11 | 223 | 134 | 351 | 6.80e-69 | 215 |
| Msa0273570 | AT1G09850.1 | 49.537 | 216 | 102 | 4 | 14 | 223 | 118 | 332 | 1.07e-67 | 214 |
| Msa0273570 | AT4G11320.2 | 47.489 | 219 | 106 | 5 | 12 | 223 | 142 | 358 | 1.74e-67 | 212 |
| Msa0273570 | AT4G11320.1 | 47.489 | 219 | 106 | 5 | 12 | 223 | 142 | 358 | 1.74e-67 | 212 |
| Msa0273570 | AT1G47128.1 | 46.957 | 230 | 109 | 6 | 3 | 223 | 126 | 351 | 6.64e-66 | 211 |
| Msa0273570 | AT1G06260.1 | 50.917 | 218 | 98 | 5 | 13 | 223 | 126 | 341 | 7.06e-65 | 204 |
| Msa0273570 | AT3G19400.1 | 49.776 | 223 | 100 | 6 | 12 | 224 | 128 | 348 | 7.68e-64 | 202 |
| Msa0273570 | AT1G29110.1 | 49.524 | 210 | 93 | 5 | 19 | 225 | 135 | 334 | 1.39e-62 | 198 |
| Msa0273570 | AT3G43960.1 | 44.843 | 223 | 110 | 8 | 12 | 223 | 125 | 345 | 1.19e-51 | 171 |
| Msa0273570 | AT4G39090.1 | 40.909 | 220 | 107 | 7 | 7 | 205 | 128 | 345 | 1.22e-49 | 166 |
| Msa0273570 | AT5G60360.1 | 43.946 | 223 | 108 | 9 | 14 | 225 | 141 | 357 | 2.36e-48 | 162 |
| Msa0273570 | AT3G54940.2 | 41.395 | 215 | 103 | 7 | 12 | 205 | 135 | 347 | 3.92e-48 | 162 |
| Msa0273570 | AT2G21430.1 | 40.909 | 220 | 107 | 8 | 7 | 205 | 125 | 342 | 8.20e-48 | 161 |
| Msa0273570 | AT5G60360.2 | 43.049 | 223 | 109 | 8 | 14 | 225 | 141 | 356 | 7.91e-47 | 158 |
| Msa0273570 | AT4G16190.1 | 39.565 | 230 | 115 | 6 | 7 | 216 | 133 | 358 | 8.03e-46 | 156 |
| Msa0273570 | AT3G45310.1 | 42.152 | 223 | 112 | 9 | 14 | 225 | 141 | 357 | 3.33e-44 | 152 |
| Msa0273570 | AT5G60360.3 | 43.781 | 201 | 100 | 7 | 14 | 203 | 141 | 339 | 4.04e-44 | 151 |
| Msa0273570 | AT3G45310.2 | 41.256 | 223 | 113 | 8 | 14 | 225 | 141 | 356 | 1.03e-42 | 147 |
| Msa0273570 | AT4G35350.2 | 49.383 | 162 | 74 | 4 | 2 | 155 | 123 | 284 | 2.97e-42 | 145 |
| Msa0273570 | AT3G48350.2 | 48.387 | 155 | 73 | 4 | 14 | 161 | 126 | 280 | 1.40e-40 | 140 |
| Msa0273570 | AT3G19400.2 | 48.684 | 152 | 67 | 5 | 12 | 153 | 128 | 278 | 6.15e-35 | 125 |
| Msa0273570 | AT3G54940.3 | 39.860 | 143 | 72 | 3 | 12 | 141 | 135 | 276 | 2.53e-31 | 116 |
| Msa0273570 | AT1G02305.1 | 30.612 | 245 | 135 | 8 | 6 | 218 | 98 | 339 | 6.17e-28 | 108 |
| Msa0273570 | AT4G01610.1 | 31.197 | 234 | 124 | 8 | 14 | 216 | 103 | 330 | 8.36e-26 | 103 |
| Msa0273570 | AT4G01610.2 | 30.342 | 234 | 126 | 8 | 14 | 216 | 103 | 330 | 6.52e-24 | 98.2 |
| Msa0273570 | AT1G02300.1 | 30.986 | 213 | 110 | 9 | 33 | 216 | 146 | 350 | 3.98e-20 | 87.8 |
Find 49 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTGGAATATCATCATTC+AGG | 0.284103 | 2_3:-5148614 | None:intergenic |
| TACATGGGAGATGTTTATTC+AGG | 0.287046 | 2_3:+5149815 | Msa0273570:CDS |
| ATTGGTTGATTAAGAATTCT+TGG | 0.312011 | 2_3:+5149909 | Msa0273570:CDS |
| AGAATTCTTGGGGTAAAGAT+TGG | 0.334902 | 2_3:+5149921 | Msa0273570:CDS |
| GTCTGACTACCTTCTTGATA+TGG | 0.345175 | 2_3:-5149647 | None:intergenic |
| TTGGTTGATTAAGAATTCTT+GGG | 0.374775 | 2_3:+5149910 | Msa0273570:CDS |
| GAATTCTTGGGGTAAAGATT+GGG | 0.376941 | 2_3:+5149922 | Msa0273570:CDS |
| TGGGTGTGGTGGAGGTAATA+TGG | 0.384068 | 2_3:+5149568 | Msa0273570:CDS |
| CTCATTATCTGAGCAACAAT+TGG | 0.401955 | 2_3:+5149523 | Msa0273570:CDS |
| ACTGCAATGCCAACTGATAC+TGG | 0.406208 | 2_3:-5149773 | None:intergenic |
| TAGCAGTTGTTGTTCATCAT+TGG | 0.413217 | 2_3:-5149732 | None:intergenic |
| TGTCTCCAATCAAAATTTGT+TGG | 0.429280 | 2_3:-5148630 | None:intergenic |
| GGTTTGTATTATATATTTGA+AGG | 0.448659 | 2_3:-5149597 | None:intergenic |
| GGTAAAGATTGGGGTGAAGA+AGG | 0.460104 | 2_3:+5149932 | Msa0273570:CDS |
| TGATGAATTTCAACATTACA+TGG | 0.464191 | 2_3:+5149799 | Msa0273570:CDS |
| TGTCTCACTAACAATACCTT+GGG | 0.465163 | 2_3:-5149618 | None:intergenic |
| AATATCATCATTCAGGTTGA+AGG | 0.470988 | 2_3:-5148607 | None:intergenic |
| GCAGTTACTGCAGTTGGTTA+CGG | 0.478465 | 2_3:+5149863 | Msa0273570:CDS |
| GATGTTTATTCAGGAATATG+TGG | 0.488961 | 2_3:+5149824 | Msa0273570:CDS |
| CTGTCTCACTAACAATACCT+TGG | 0.493668 | 2_3:-5149619 | None:intergenic |
| AGTTGTTGTTCATCATTGGC+AGG | 0.496843 | 2_3:-5149728 | None:intergenic |
| AACCATGCAGTTACTGCAGT+TGG | 0.506721 | 2_3:+5149857 | Msa0273570:CDS |
| AGGTTACATGAAGTTGTTGA+GGG | 0.508816 | 2_3:+5149952 | Msa0273570:CDS |
| GCAATGCCACATTGACCTCC+TGG | 0.513337 | 2_3:-5149986 | None:intergenic |
| TTGAGGGAAAGTGGTGAACC+AGG | 0.520538 | 2_3:+5149968 | Msa0273570:CDS |
| AATTCTTGGGGTAAAGATTG+GGG | 0.530447 | 2_3:+5149923 | Msa0273570:CDS |
| GGTTACGGTGTAAGTGAAGA+TGG | 0.532156 | 2_3:+5149878 | Msa0273570:CDS |
| GTGAAGATGGAACTAAGTAT+TGG | 0.533019 | 2_3:+5149891 | Msa0273570:CDS |
| AAGACATACCACAACTGCCT+TGG | 0.539526 | 2_3:-5148680 | None:intergenic |
| ATGAAGTTGTTGAGGGAAAG+TGG | 0.542145 | 2_3:+5149959 | Msa0273570:CDS |
| GTTAAAGACCAAGGCAGTTG+TGG | 0.558254 | 2_3:+5148672 | Msa0273570:CDS |
| CAGAACAATGGGTGTGGTGG+AGG | 0.560185 | 2_3:+5149560 | Msa0273570:CDS |
| ACTGCCTTGGTCTTTAACAT+CGG | 0.570004 | 2_3:-5148667 | None:intergenic |
| AAGGTTACATGAAGTTGTTG+AGG | 0.582698 | 2_3:+5149951 | Msa0273570:CDS |
| ACTGCGATGAACAGAACAAT+GGG | 0.582764 | 2_3:+5149549 | Msa0273570:CDS |
| ATATCATCATTCAGGTTGAA+GGG | 0.586071 | 2_3:-5148606 | None:intergenic |
| TGGTTGATTAAGAATTCTTG+GGG | 0.586376 | 2_3:+5149911 | Msa0273570:CDS |
| ACAGATTATCCATATCAAGA+AGG | 0.601748 | 2_3:+5149638 | Msa0273570:CDS |
| AACCAACTGCAGTAACTGCA+TGG | 0.607601 | 2_3:-5149859 | None:intergenic |
| GTATCAGTTGGCATTGCAGT+CGG | 0.623362 | 2_3:+5149776 | Msa0273570:CDS |
| GATGAATTTCAACATTACAT+GGG | 0.623570 | 2_3:+5149800 | Msa0273570:CDS |
| GAACAGAACAATGGGTGTGG+TGG | 0.628748 | 2_3:+5149557 | Msa0273570:CDS |
| GCACAACAACCAGTATCAGT+TGG | 0.635741 | 2_3:+5149764 | Msa0273570:CDS |
| AAATATATAATACAAACCCA+AGG | 0.655643 | 2_3:+5149602 | Msa0273570:CDS |
| GGTGAACCAGGAGGTCAATG+TGG | 0.664219 | 2_3:+5149980 | Msa0273570:CDS |
| GACTGCGATGAACAGAACAA+TGG | 0.669619 | 2_3:+5149548 | Msa0273570:CDS |
| GTTACCGATGTTAAAGACCA+AGG | 0.675798 | 2_3:+5148663 | Msa0273570:CDS |
| GATGAACAGAACAATGGGTG+TGG | 0.700071 | 2_3:+5149554 | Msa0273570:CDS |
| AGGGAAAGTGGTGAACCAGG+AGG | 0.728920 | 2_3:+5149971 | Msa0273570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTGATATAAAATAAAA+TGG | - | chr2_3:5148888-5148907 | None:intergenic | 10.0% |
| !!! | TTATTTAGATTTTTCTTTTT+TGG | - | chr2_3:5149132-5149151 | None:intergenic | 10.0% |
| !!! | AAAGTTACATTTTAATATTA+AGG | + | chr2_3:5149296-5149315 | Msa0273570:intron | 10.0% |
| !!! | TTTTGTGATATAAAATAAAA+TGG | - | chr2_3:5148888-5148907 | None:intergenic | 10.0% |
| !!! | TTATTTAGATTTTTCTTTTT+TGG | - | chr2_3:5149132-5149151 | None:intergenic | 10.0% |
| !!! | AAAGTTACATTTTAATATTA+AGG | + | chr2_3:5149296-5149315 | Msa0273570:intron | 10.0% |
| !!! | TATTTTTTAATTAGTCATCT+TGG | + | chr2_3:5148720-5148739 | Msa0273570:intron | 15.0% |
| !! | TGATATAAAATAAAATGGAA+TGG | - | chr2_3:5148883-5148902 | None:intergenic | 15.0% |
| !! | AAATATCGAAAAGTTATTTA+AGG | + | chr2_3:5149185-5149204 | Msa0273570:intron | 15.0% |
| !!! | TATTATTCAATATGTTTTGT+AGG | + | chr2_3:5149443-5149462 | Msa0273570:intron | 15.0% |
| !!! | TATTTTTTAATTAGTCATCT+TGG | + | chr2_3:5148720-5148739 | Msa0273570:intron | 15.0% |
| !! | TGATATAAAATAAAATGGAA+TGG | - | chr2_3:5148883-5148902 | None:intergenic | 15.0% |
| !! | AAATATCGAAAAGTTATTTA+AGG | + | chr2_3:5149185-5149204 | Msa0273570:intron | 15.0% |
| !!! | TATTATTCAATATGTTTTGT+AGG | + | chr2_3:5149443-5149462 | Msa0273570:intron | 15.0% |
| !!! | ATATTCCAACAAATTTTGAT+TGG | + | chr2_3:5148625-5148644 | Msa0273570:CDS | 20.0% |
| !!! | TTTAGATTTTTCTTTTTTGG+TGG | - | chr2_3:5149129-5149148 | None:intergenic | 20.0% |
| !!! | AATAACTTTTCGATATTTGA+TGG | - | chr2_3:5149183-5149202 | None:intergenic | 20.0% |
| !! | GGTTTGTATTATATATTTGA+AGG | - | chr2_3:5149600-5149619 | None:intergenic | 20.0% |
| !! | AAATATATAATACAAACCCA+AGG | + | chr2_3:5149602-5149621 | Msa0273570:CDS | 20.0% |
| !!! | ATATTCCAACAAATTTTGAT+TGG | + | chr2_3:5148625-5148644 | Msa0273570:CDS | 20.0% |
| !!! | TTTAGATTTTTCTTTTTTGG+TGG | - | chr2_3:5149129-5149148 | None:intergenic | 20.0% |
| !!! | AATAACTTTTCGATATTTGA+TGG | - | chr2_3:5149183-5149202 | None:intergenic | 20.0% |
| !! | GGTTTGTATTATATATTTGA+AGG | - | chr2_3:5149600-5149619 | None:intergenic | 20.0% |
| !! | AAATATATAATACAAACCCA+AGG | + | chr2_3:5149602-5149621 | Msa0273570:CDS | 20.0% |
| ! | TATGCTTCATTAAAAGTTCT+CGG | - | chr2_3:5148923-5148942 | None:intergenic | 25.0% |
| ! | TGATGTGTTTATATGGTATT+TGG | - | chr2_3:5148959-5148978 | None:intergenic | 25.0% |
| ! | ACAATGCATAAAAATATGCA+AGG | + | chr2_3:5149081-5149100 | Msa0273570:intron | 25.0% |
| ! | ATAAAAATATGCAAGGTCTA+GGG | + | chr2_3:5149088-5149107 | Msa0273570:intron | 25.0% |
| ! | TGATGAATTTCAACATTACA+TGG | + | chr2_3:5149799-5149818 | Msa0273570:CDS | 25.0% |
| ! | GATGAATTTCAACATTACAT+GGG | + | chr2_3:5149800-5149819 | Msa0273570:CDS | 25.0% |
| ! | ATTGGTTGATTAAGAATTCT+TGG | + | chr2_3:5149909-5149928 | Msa0273570:CDS | 25.0% |
| ! | TTGGTTGATTAAGAATTCTT+GGG | + | chr2_3:5149910-5149929 | Msa0273570:CDS | 25.0% |
| ! | TATGCTTCATTAAAAGTTCT+CGG | - | chr2_3:5148923-5148942 | None:intergenic | 25.0% |
| ! | TGATGTGTTTATATGGTATT+TGG | - | chr2_3:5148959-5148978 | None:intergenic | 25.0% |
| ! | ACAATGCATAAAAATATGCA+AGG | + | chr2_3:5149081-5149100 | Msa0273570:intron | 25.0% |
| ! | ATAAAAATATGCAAGGTCTA+GGG | + | chr2_3:5149088-5149107 | Msa0273570:intron | 25.0% |
| ! | TGATGAATTTCAACATTACA+TGG | + | chr2_3:5149799-5149818 | Msa0273570:CDS | 25.0% |
| ! | GATGAATTTCAACATTACAT+GGG | + | chr2_3:5149800-5149819 | Msa0273570:CDS | 25.0% |
| ! | ATTGGTTGATTAAGAATTCT+TGG | + | chr2_3:5149909-5149928 | Msa0273570:CDS | 25.0% |
| ! | TTGGTTGATTAAGAATTCTT+GGG | + | chr2_3:5149910-5149929 | Msa0273570:CDS | 25.0% |
| !! | ATATCATCATTCAGGTTGAA+GGG | - | chr2_3:5148609-5148628 | None:intergenic | 30.0% |
| !! | AATATCATCATTCAGGTTGA+AGG | - | chr2_3:5148610-5148629 | None:intergenic | 30.0% |
| TTGTTGGAATATCATCATTC+AGG | - | chr2_3:5148617-5148636 | None:intergenic | 30.0% | |
| TGTCTCCAATCAAAATTTGT+TGG | - | chr2_3:5148633-5148652 | None:intergenic | 30.0% | |
| !!! | AATTTTGATTGGAGACAACA+AGG | + | chr2_3:5148636-5148655 | Msa0273570:CDS | 30.0% |
| TATTGGAGACTTTGTTAGTT+TGG | - | chr2_3:5148780-5148799 | None:intergenic | 30.0% | |
| AACAAAGTCTCCAATATGTT+TGG | + | chr2_3:5148784-5148803 | Msa0273570:intron | 30.0% | |
| ! | CTCCAATATGTTTGGATTTT+CGG | + | chr2_3:5148792-5148811 | Msa0273570:intron | 30.0% |
| TACCGAAAATCCAAACATAT+TGG | - | chr2_3:5148797-5148816 | None:intergenic | 30.0% | |
| ! | TGTTTGGATTTTCGGTATAA+AGG | + | chr2_3:5148800-5148819 | Msa0273570:intron | 30.0% |
| ! | GATGTGTTGATGTGTTTATA+TGG | - | chr2_3:5148966-5148985 | None:intergenic | 30.0% |
| CATAAAAATATGCAAGGTCT+AGG | + | chr2_3:5149087-5149106 | Msa0273570:intron | 30.0% | |
| !!! | AGATTTTTCTTTTTTGGTGG+TGG | - | chr2_3:5149126-5149145 | None:intergenic | 30.0% |
| !! | TGTAATTTCTAGCCTTAGAT+AGG | - | chr2_3:5149327-5149346 | None:intergenic | 30.0% |
| ! | TATGTTTTGTAGGATGTTGT+TGG | + | chr2_3:5149453-5149472 | Msa0273570:intron | 30.0% |
| ! | ATGTTTTGTAGGATGTTGTT+GGG | + | chr2_3:5149454-5149473 | Msa0273570:intron | 30.0% |
| ACAGATTATCCATATCAAGA+AGG | + | chr2_3:5149638-5149657 | Msa0273570:CDS | 30.0% | |
| GATGTTTATTCAGGAATATG+TGG | + | chr2_3:5149824-5149843 | Msa0273570:CDS | 30.0% | |
| TGGTTGATTAAGAATTCTTG+GGG | + | chr2_3:5149911-5149930 | Msa0273570:CDS | 30.0% | |
| !! | ATATCATCATTCAGGTTGAA+GGG | - | chr2_3:5148609-5148628 | None:intergenic | 30.0% |
| !! | AATATCATCATTCAGGTTGA+AGG | - | chr2_3:5148610-5148629 | None:intergenic | 30.0% |
| TTGTTGGAATATCATCATTC+AGG | - | chr2_3:5148617-5148636 | None:intergenic | 30.0% | |
| TGTCTCCAATCAAAATTTGT+TGG | - | chr2_3:5148633-5148652 | None:intergenic | 30.0% | |
| !!! | AATTTTGATTGGAGACAACA+AGG | + | chr2_3:5148636-5148655 | Msa0273570:CDS | 30.0% |
| TATTGGAGACTTTGTTAGTT+TGG | - | chr2_3:5148780-5148799 | None:intergenic | 30.0% | |
| AACAAAGTCTCCAATATGTT+TGG | + | chr2_3:5148784-5148803 | Msa0273570:intron | 30.0% | |
| ! | CTCCAATATGTTTGGATTTT+CGG | + | chr2_3:5148792-5148811 | Msa0273570:intron | 30.0% |
| TACCGAAAATCCAAACATAT+TGG | - | chr2_3:5148797-5148816 | None:intergenic | 30.0% | |
| ! | TGTTTGGATTTTCGGTATAA+AGG | + | chr2_3:5148800-5148819 | Msa0273570:intron | 30.0% |
| ! | GATGTGTTGATGTGTTTATA+TGG | - | chr2_3:5148966-5148985 | None:intergenic | 30.0% |
| CATAAAAATATGCAAGGTCT+AGG | + | chr2_3:5149087-5149106 | Msa0273570:intron | 30.0% | |
| !!! | AGATTTTTCTTTTTTGGTGG+TGG | - | chr2_3:5149126-5149145 | None:intergenic | 30.0% |
| !! | TGTAATTTCTAGCCTTAGAT+AGG | - | chr2_3:5149327-5149346 | None:intergenic | 30.0% |
| ! | TATGTTTTGTAGGATGTTGT+TGG | + | chr2_3:5149453-5149472 | Msa0273570:intron | 30.0% |
| ! | ATGTTTTGTAGGATGTTGTT+GGG | + | chr2_3:5149454-5149473 | Msa0273570:intron | 30.0% |
| ACAGATTATCCATATCAAGA+AGG | + | chr2_3:5149638-5149657 | Msa0273570:CDS | 30.0% | |
| GATGTTTATTCAGGAATATG+TGG | + | chr2_3:5149824-5149843 | Msa0273570:CDS | 30.0% | |
| TGGTTGATTAAGAATTCTTG+GGG | + | chr2_3:5149911-5149930 | Msa0273570:CDS | 30.0% | |
| TAATTAGTCATCTTGGAGCA+TGG | + | chr2_3:5148727-5148746 | Msa0273570:intron | 35.0% | |
| GGTATAAAGGTTGAATGACA+TGG | + | chr2_3:5148813-5148832 | Msa0273570:intron | 35.0% | |
| AAAAGTTCTCGGAGGATATT+TGG | - | chr2_3:5148912-5148931 | None:intergenic | 35.0% | |
| TCAAAGACACCTAATTCGAT+CGG | + | chr2_3:5149227-5149246 | Msa0273570:intron | 35.0% | |
| ATTAAGGAACCACCTATCTA+AGG | + | chr2_3:5149312-5149331 | Msa0273570:intron | 35.0% | |
| !! | AATTTCTAGCCTTAGATAGG+TGG | - | chr2_3:5149324-5149343 | None:intergenic | 35.0% |
| CTCATTATCTGAGCAACAAT+TGG | + | chr2_3:5149523-5149542 | Msa0273570:CDS | 35.0% | |
| TGTCTCACTAACAATACCTT+GGG | - | chr2_3:5149621-5149640 | None:intergenic | 35.0% | |
| ! | TAGCAGTTGTTGTTCATCAT+TGG | - | chr2_3:5149735-5149754 | None:intergenic | 35.0% |
| TACATGGGAGATGTTTATTC+AGG | + | chr2_3:5149815-5149834 | Msa0273570:CDS | 35.0% | |
| GTGAAGATGGAACTAAGTAT+TGG | + | chr2_3:5149891-5149910 | Msa0273570:CDS | 35.0% | |
| AGAATTCTTGGGGTAAAGAT+TGG | + | chr2_3:5149921-5149940 | Msa0273570:CDS | 35.0% | |
| GAATTCTTGGGGTAAAGATT+GGG | + | chr2_3:5149922-5149941 | Msa0273570:CDS | 35.0% | |
| AATTCTTGGGGTAAAGATTG+GGG | + | chr2_3:5149923-5149942 | Msa0273570:CDS | 35.0% | |
| AAGGTTACATGAAGTTGTTG+AGG | + | chr2_3:5149951-5149970 | Msa0273570:CDS | 35.0% | |
| AGGTTACATGAAGTTGTTGA+GGG | + | chr2_3:5149952-5149971 | Msa0273570:CDS | 35.0% | |
| TAATTAGTCATCTTGGAGCA+TGG | + | chr2_3:5148727-5148746 | Msa0273570:intron | 35.0% | |
| GGTATAAAGGTTGAATGACA+TGG | + | chr2_3:5148813-5148832 | Msa0273570:intron | 35.0% | |
| AAAAGTTCTCGGAGGATATT+TGG | - | chr2_3:5148912-5148931 | None:intergenic | 35.0% | |
| TCAAAGACACCTAATTCGAT+CGG | + | chr2_3:5149227-5149246 | Msa0273570:intron | 35.0% | |
| ATTAAGGAACCACCTATCTA+AGG | + | chr2_3:5149312-5149331 | Msa0273570:intron | 35.0% | |
| !! | AATTTCTAGCCTTAGATAGG+TGG | - | chr2_3:5149324-5149343 | None:intergenic | 35.0% |
| CTCATTATCTGAGCAACAAT+TGG | + | chr2_3:5149523-5149542 | Msa0273570:CDS | 35.0% | |
| TGTCTCACTAACAATACCTT+GGG | - | chr2_3:5149621-5149640 | None:intergenic | 35.0% | |
| ! | TAGCAGTTGTTGTTCATCAT+TGG | - | chr2_3:5149735-5149754 | None:intergenic | 35.0% |
| TACATGGGAGATGTTTATTC+AGG | + | chr2_3:5149815-5149834 | Msa0273570:CDS | 35.0% | |
| GTGAAGATGGAACTAAGTAT+TGG | + | chr2_3:5149891-5149910 | Msa0273570:CDS | 35.0% | |
| AGAATTCTTGGGGTAAAGAT+TGG | + | chr2_3:5149921-5149940 | Msa0273570:CDS | 35.0% | |
| GAATTCTTGGGGTAAAGATT+GGG | + | chr2_3:5149922-5149941 | Msa0273570:CDS | 35.0% | |
| AATTCTTGGGGTAAAGATTG+GGG | + | chr2_3:5149923-5149942 | Msa0273570:CDS | 35.0% | |
| AAGGTTACATGAAGTTGTTG+AGG | + | chr2_3:5149951-5149970 | Msa0273570:CDS | 35.0% | |
| AGGTTACATGAAGTTGTTGA+GGG | + | chr2_3:5149952-5149971 | Msa0273570:CDS | 35.0% | |
| GTTACCGATGTTAAAGACCA+AGG | + | chr2_3:5148663-5148682 | Msa0273570:CDS | 40.0% | |
| ! | ACTGCCTTGGTCTTTAACAT+CGG | - | chr2_3:5148670-5148689 | None:intergenic | 40.0% |
| GCTTCATTAAAAGTTCTCGG+AGG | - | chr2_3:5148920-5148939 | None:intergenic | 40.0% | |
| !!! | TTTTCTTTTTTGGTGGTGGC+CGG | - | chr2_3:5149122-5149141 | None:intergenic | 40.0% |
| ACTGCGATGAACAGAACAAT+GGG | + | chr2_3:5149549-5149568 | Msa0273570:CDS | 40.0% | |
| CTGTCTCACTAACAATACCT+TGG | - | chr2_3:5149622-5149641 | None:intergenic | 40.0% | |
| GTCTGACTACCTTCTTGATA+TGG | - | chr2_3:5149650-5149669 | None:intergenic | 40.0% | |
| ! | AGTTGTTGTTCATCATTGGC+AGG | - | chr2_3:5149731-5149750 | None:intergenic | 40.0% |
| ATGAAGTTGTTGAGGGAAAG+TGG | + | chr2_3:5149959-5149978 | Msa0273570:CDS | 40.0% | |
| GTTACCGATGTTAAAGACCA+AGG | + | chr2_3:5148663-5148682 | Msa0273570:CDS | 40.0% | |
| ! | ACTGCCTTGGTCTTTAACAT+CGG | - | chr2_3:5148670-5148689 | None:intergenic | 40.0% |
| GCTTCATTAAAAGTTCTCGG+AGG | - | chr2_3:5148920-5148939 | None:intergenic | 40.0% | |
| !!! | TTTTCTTTTTTGGTGGTGGC+CGG | - | chr2_3:5149122-5149141 | None:intergenic | 40.0% |
| ACTGCGATGAACAGAACAAT+GGG | + | chr2_3:5149549-5149568 | Msa0273570:CDS | 40.0% | |
| CTGTCTCACTAACAATACCT+TGG | - | chr2_3:5149622-5149641 | None:intergenic | 40.0% | |
| GTCTGACTACCTTCTTGATA+TGG | - | chr2_3:5149650-5149669 | None:intergenic | 40.0% | |
| ! | AGTTGTTGTTCATCATTGGC+AGG | - | chr2_3:5149731-5149750 | None:intergenic | 40.0% |
| ATGAAGTTGTTGAGGGAAAG+TGG | + | chr2_3:5149959-5149978 | Msa0273570:CDS | 40.0% | |
| GTTAAAGACCAAGGCAGTTG+TGG | + | chr2_3:5148672-5148691 | Msa0273570:CDS | 45.0% | |
| AAGACATACCACAACTGCCT+TGG | - | chr2_3:5148683-5148702 | None:intergenic | 45.0% | |
| !!! | TTTCTTTTTTGGTGGTGGCC+GGG | - | chr2_3:5149121-5149140 | None:intergenic | 45.0% |
| GCACAAACACCGATCGAATT+AGG | - | chr2_3:5149239-5149258 | None:intergenic | 45.0% | |
| GACTGCGATGAACAGAACAA+TGG | + | chr2_3:5149548-5149567 | Msa0273570:CDS | 45.0% | |
| GATGAACAGAACAATGGGTG+TGG | + | chr2_3:5149554-5149573 | Msa0273570:CDS | 45.0% | |
| GCACAACAACCAGTATCAGT+TGG | + | chr2_3:5149764-5149783 | Msa0273570:CDS | 45.0% | |
| ACTGCAATGCCAACTGATAC+TGG | - | chr2_3:5149776-5149795 | None:intergenic | 45.0% | |
| GTATCAGTTGGCATTGCAGT+CGG | + | chr2_3:5149776-5149795 | Msa0273570:CDS | 45.0% | |
| AACCATGCAGTTACTGCAGT+TGG | + | chr2_3:5149857-5149876 | Msa0273570:CDS | 45.0% | |
| AACCAACTGCAGTAACTGCA+TGG | - | chr2_3:5149862-5149881 | None:intergenic | 45.0% | |
| GCAGTTACTGCAGTTGGTTA+CGG | + | chr2_3:5149863-5149882 | Msa0273570:CDS | 45.0% | |
| GGTTACGGTGTAAGTGAAGA+TGG | + | chr2_3:5149878-5149897 | Msa0273570:CDS | 45.0% | |
| GGTAAAGATTGGGGTGAAGA+AGG | + | chr2_3:5149932-5149951 | Msa0273570:CDS | 45.0% | |
| GTTAAAGACCAAGGCAGTTG+TGG | + | chr2_3:5148672-5148691 | Msa0273570:CDS | 45.0% | |
| AAGACATACCACAACTGCCT+TGG | - | chr2_3:5148683-5148702 | None:intergenic | 45.0% | |
| !!! | TTTCTTTTTTGGTGGTGGCC+GGG | - | chr2_3:5149121-5149140 | None:intergenic | 45.0% |
| GCACAAACACCGATCGAATT+AGG | - | chr2_3:5149239-5149258 | None:intergenic | 45.0% | |
| GACTGCGATGAACAGAACAA+TGG | + | chr2_3:5149548-5149567 | Msa0273570:CDS | 45.0% | |
| GATGAACAGAACAATGGGTG+TGG | + | chr2_3:5149554-5149573 | Msa0273570:CDS | 45.0% | |
| GCACAACAACCAGTATCAGT+TGG | + | chr2_3:5149764-5149783 | Msa0273570:CDS | 45.0% | |
| ACTGCAATGCCAACTGATAC+TGG | - | chr2_3:5149776-5149795 | None:intergenic | 45.0% | |
| GTATCAGTTGGCATTGCAGT+CGG | + | chr2_3:5149776-5149795 | Msa0273570:CDS | 45.0% | |
| AACCATGCAGTTACTGCAGT+TGG | + | chr2_3:5149857-5149876 | Msa0273570:CDS | 45.0% | |
| AACCAACTGCAGTAACTGCA+TGG | - | chr2_3:5149862-5149881 | None:intergenic | 45.0% | |
| GCAGTTACTGCAGTTGGTTA+CGG | + | chr2_3:5149863-5149882 | Msa0273570:CDS | 45.0% | |
| GGTTACGGTGTAAGTGAAGA+TGG | + | chr2_3:5149878-5149897 | Msa0273570:CDS | 45.0% | |
| GGTAAAGATTGGGGTGAAGA+AGG | + | chr2_3:5149932-5149951 | Msa0273570:CDS | 45.0% | |
| !! | AATAATAAATATAAACATAT+TGG | + | chr2_3:5149058-5149077 | Msa0273570:intron | 5.0% |
| !! | AATAATAAATATAAACATAT+TGG | + | chr2_3:5149058-5149077 | Msa0273570:intron | 5.0% |
| !!! | TTCTTTTTTGGTGGTGGCCG+GGG | - | chr2_3:5149120-5149139 | None:intergenic | 50.0% |
| GAACAGAACAATGGGTGTGG+TGG | + | chr2_3:5149557-5149576 | Msa0273570:CDS | 50.0% | |
| ! | TGGGTGTGGTGGAGGTAATA+TGG | + | chr2_3:5149568-5149587 | Msa0273570:CDS | 50.0% |
| TTGAGGGAAAGTGGTGAACC+AGG | + | chr2_3:5149968-5149987 | Msa0273570:CDS | 50.0% | |
| !!! | TTCTTTTTTGGTGGTGGCCG+GGG | - | chr2_3:5149120-5149139 | None:intergenic | 50.0% |
| GAACAGAACAATGGGTGTGG+TGG | + | chr2_3:5149557-5149576 | Msa0273570:CDS | 50.0% | |
| ! | TGGGTGTGGTGGAGGTAATA+TGG | + | chr2_3:5149568-5149587 | Msa0273570:CDS | 50.0% |
| TTGAGGGAAAGTGGTGAACC+AGG | + | chr2_3:5149968-5149987 | Msa0273570:CDS | 50.0% | |
| ! | AAGGTCTAGGGTTCGAACCC+CGG | + | chr2_3:5149100-5149119 | Msa0273570:intron | 55.0% |
| CAGAACAATGGGTGTGGTGG+AGG | + | chr2_3:5149560-5149579 | Msa0273570:CDS | 55.0% | |
| AGGGAAAGTGGTGAACCAGG+AGG | + | chr2_3:5149971-5149990 | Msa0273570:CDS | 55.0% | |
| GGTGAACCAGGAGGTCAATG+TGG | + | chr2_3:5149980-5149999 | Msa0273570:CDS | 55.0% | |
| GCAATGCCACATTGACCTCC+TGG | - | chr2_3:5149989-5150008 | None:intergenic | 55.0% | |
| ! | AAGGTCTAGGGTTCGAACCC+CGG | + | chr2_3:5149100-5149119 | Msa0273570:intron | 55.0% |
| CAGAACAATGGGTGTGGTGG+AGG | + | chr2_3:5149560-5149579 | Msa0273570:CDS | 55.0% | |
| AGGGAAAGTGGTGAACCAGG+AGG | + | chr2_3:5149971-5149990 | Msa0273570:CDS | 55.0% | |
| GGTGAACCAGGAGGTCAATG+TGG | + | chr2_3:5149980-5149999 | Msa0273570:CDS | 55.0% | |
| GCAATGCCACATTGACCTCC+TGG | - | chr2_3:5149989-5150008 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 5148588 | 5150036 | 5148588 | ID=Msa0273570;Name=Msa0273570 |
| chr2_3 | mRNA | 5148588 | 5150036 | 5148588 | ID=Msa0273570-mRNA-1;Parent=Msa0273570;Name=Msa0273570-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|1|1|1|2|0|225 |
| chr2_3 | exon | 5148588 | 5148693 | 5148588 | ID=Msa0273570-mRNA-1:exon:2505;Parent=Msa0273570-mRNA-1 |
| chr2_3 | exon | 5149465 | 5150036 | 5149465 | ID=Msa0273570-mRNA-1:exon:2506;Parent=Msa0273570-mRNA-1 |
| chr2_3 | CDS | 5148588 | 5148693 | 5148588 | ID=Msa0273570-mRNA-1:cds;Parent=Msa0273570-mRNA-1 |
| chr2_3 | CDS | 5149465 | 5150036 | 5149465 | ID=Msa0273570-mRNA-1:cds;Parent=Msa0273570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
