AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0678450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0678450 MtrunA17_Chr4g0023911 92.943 581 40 1 1 581 1 580 0.0 1124
Msa0678450 MtrunA17_Chr2g0310331 46.558 552 280 7 35 580 42 584 1.47e-164 481
Msa0678450 MtrunA17_Chr8g0357411 43.190 558 302 8 32 580 36 587 1.35e-147 438
Msa0678450 MtrunA17_Chr2g0310401 46.963 428 223 3 155 580 5 430 2.34e-131 390
Msa0678450 MtrunA17_Chr4g0042111 37.050 556 340 5 31 579 7 559 1.46e-121 370
Msa0678450 MtrunA17_Chr2g0323151 40.860 465 265 4 96 559 4 459 1.85e-114 349
Msa0678450 MtrunA17_Chr2g0323131 39.831 472 273 5 90 559 82 544 5.24e-114 351
Msa0678450 MtrunA17_Chr6g0465441 34.124 548 355 4 38 580 5 551 1.78e-111 344
Msa0678450 MtrunA17_Chr4g0024691 36.051 552 344 6 35 580 11 559 2.21e-111 344
Msa0678450 MtrunA17_Chr6g0451711 34.116 554 353 4 35 580 6 555 1.50e-110 342
Msa0678450 MtrunA17_Chr6g0466051 34.489 548 353 4 38 580 5 551 2.71e-108 335
Msa0678450 MtrunA17_Chr6g0465911 34.489 548 353 4 38 580 5 551 4.78e-108 335
Msa0678450 MtrunA17_Chr7g0237001 34.312 545 347 4 43 580 11 551 1.02e-105 329
Msa0678450 MtrunA17_Chr7g0237041 34.312 545 347 4 43 580 11 551 1.02e-105 329
Msa0678450 MtrunA17_Chr7g0237081 34.312 545 347 4 43 580 11 551 1.02e-105 329
Msa0678450 MtrunA17_Chr7g0237051 34.312 545 347 4 43 580 11 551 1.02e-105 329
Msa0678450 MtrunA17_Chr5g0425371 33.579 542 355 3 43 580 11 551 1.30e-105 328
Msa0678450 MtrunA17_Chr3g0082691 34.444 540 348 4 46 580 13 551 3.64e-105 327
Msa0678450 MtrunA17_Chr7g0236991 34.128 545 348 4 43 580 11 551 4.32e-105 327
Msa0678450 MtrunA17_Chr2g0319051 37.622 513 300 11 81 581 9 513 1.74e-104 325
Msa0678450 MtrunA17_Chr6g0465851 34.825 514 331 2 70 580 4 516 4.19e-104 323
Msa0678450 MtrunA17_Chr3g0105071 34.234 555 359 4 31 580 2 555 1.88e-102 320
Msa0678450 MtrunA17_Chr7g0237011 35.670 485 311 1 96 580 13 496 4.90e-102 317
Msa0678450 MtrunA17_Chr7g0236961 35.464 485 312 1 96 580 13 496 2.71e-101 315
Msa0678450 MtrunA17_Chr2g0319041 35.663 558 340 13 37 581 5 556 1.90e-98 310
Msa0678450 MtrunA17_Chr8g0336181 35.636 550 331 9 46 580 13 554 1.00e-97 308
Msa0678450 MtrunA17_Chr5g0431571 35.000 540 345 4 46 580 9 547 1.64e-97 307
Msa0678450 MtrunA17_Chr5g0431651 34.116 554 344 8 40 580 5 550 8.22e-96 303
Msa0678450 MtrunA17_Chr4g0048911 35.560 509 284 12 76 561 54 541 6.20e-95 301
Msa0678450 MtrunA17_Chr6g0465981 40.379 369 214 4 38 401 5 372 1.57e-84 268
Msa0678450 MtrunA17_Chr6g0465871 40.379 369 214 4 38 401 5 372 1.57e-84 268
Msa0678450 MtrunA17_Chr6g0466081 40.379 369 214 4 38 401 5 372 1.57e-84 268
Msa0678450 MtrunA17_Chr6g0465931 41.493 335 192 2 70 401 4 337 2.17e-80 256
Msa0678450 MtrunA17_Chr6g0466111 41.493 335 192 2 70 401 4 337 2.29e-80 256
Msa0678450 MtrunA17_Chr7g0236971 34.500 400 261 1 181 580 1 399 9.21e-79 254
Msa0678450 MtrunA17_Chr4g0008621 35.835 413 244 9 45 443 20 425 3.40e-78 253
Msa0678450 MtrunA17_Chr4g0048921 33.402 482 311 6 86 562 77 553 6.14e-78 257
Msa0678450 MtrunA17_Chr7g0237031 44.792 288 155 2 96 380 13 299 6.62e-78 249
Msa0678450 MtrunA17_Chr2g0280581 33.201 503 317 11 70 557 2 500 3.40e-77 253
Msa0678450 MtrunA17_Chr7g0236951 44.444 288 156 2 96 380 13 299 4.40e-77 247
Msa0678450 MtrunA17_Chr3g0108941 33.533 501 314 11 70 557 2 496 2.68e-76 251
Msa0678450 MtrunA17_Chr3g0109031 33.602 497 318 10 70 557 2 495 1.20e-75 249
Msa0678450 MtrunA17_Chr3g0108981 34.599 474 288 10 98 557 6 471 1.84e-75 248
Msa0678450 MtrunA17_Chr3g0108961 34.599 474 288 10 98 557 6 471 1.84e-75 248
Msa0678450 MtrunA17_Chr3g0105691 33.400 503 315 11 68 557 33 528 3.26e-75 249
Msa0678450 MtrunA17_Chr7g0217361 41.860 301 173 2 280 579 8 307 4.13e-75 241
Msa0678450 MtrunA17_Chr3g0108991 32.998 497 321 10 70 557 2 495 9.01e-75 247
Msa0678450 MtrunA17_Chr3g0108951 32.998 497 321 10 70 557 2 495 9.01e-75 247
Msa0678450 MtrunA17_Chr3g0109001 33.333 501 315 11 70 557 2 496 9.73e-75 247
Msa0678450 MtrunA17_Chr3g0109011 34.395 471 292 11 98 557 6 470 3.63e-74 244
Msa0678450 MtrunA17_Chr3g0109021 32.797 497 322 10 70 557 2 495 2.61e-73 243
Msa0678450 MtrunA17_Chr6g0477111 33.612 479 285 10 98 557 6 470 2.67e-73 242
Msa0678450 MtrunA17_Chr3g0108971 34.188 468 297 9 98 557 6 470 7.24e-73 241
Msa0678450 MtrunA17_Chr3g0099031 32.314 523 326 13 70 576 2 512 7.61e-71 236
Msa0678450 MtrunA17_Chr6g0477121 35.539 408 251 9 158 557 10 413 3.81e-66 221
Msa0678450 MtrunA17_Chr8g0357231 41.860 258 148 2 324 580 1 257 2.73e-63 208
Msa0678450 MtrunA17_Chr2g0319071 30.409 513 303 12 76 581 23 488 2.55e-56 197
Msa0678450 MtrunA17_Chr5g0445511 40.586 239 141 1 177 415 2 239 1.14e-54 185
Msa0678450 MtrunA17_Chr8g0357221 40.927 259 141 5 32 282 36 290 1.19e-53 184
Msa0678450 MtrunA17_Chr2g0319081 32.119 302 185 7 283 580 140 425 1.59e-41 155
Msa0678450 MtrunA17_Chr2g0310121 28.571 434 282 12 96 506 276 704 2.70e-39 153
Msa0678450 MtrunA17_Chr3g0101681 28.160 451 295 13 96 522 277 722 3.51e-39 153
Msa0678450 MtrunA17_Chr7g0237071 40.306 196 117 0 96 291 13 208 7.60e-39 142
Msa0678450 MtrunA17_Chr6g0466031 28.016 257 185 0 324 580 2 258 3.80e-35 133
Msa0678450 MtrunA17_Chr6g0466021 40.306 196 112 3 38 228 5 200 2.77e-34 129
Msa0678450 MtrunA17_Chr7g0217351 39.062 192 109 4 96 283 86 273 2.05e-31 124
Msa0678450 MtrunA17_Chr7g0237061 28.682 258 159 3 324 580 2 235 9.49e-29 114
Msa0678450 MtrunA17_Chr2g0281651 34.263 251 152 9 258 504 43 284 5.53e-27 113
Msa0678450 MtrunA17_Chr7g0218001 27.324 355 216 10 98 417 349 696 3.15e-25 110
Msa0678450 MtrunA17_Chr7g0233861 36.986 146 82 1 210 355 22 157 8.37e-24 99.0
Msa0678450 MtrunA17_Chr7g0259881 27.636 275 158 9 98 339 232 498 1.61e-22 102
Msa0678450 MtrunA17_Chr2g0310411 40.708 113 59 4 46 156 58 164 5.93e-18 81.6
Msa0678450 MtrunA17_Chr5g0445501 25.294 170 127 0 411 580 1 170 1.47e-17 80.5
Msa0678450 MtrunA17_Chr7g0237021 24.118 170 129 0 411 580 1 170 1.63e-14 72.0
Msa0678450 MtrunA17_Chr7g0236941 24.118 170 129 0 411 580 1 170 1.63e-14 72.0
Msa0678450 MtrunA17_Chr7g0218041 25.000 308 189 10 143 417 1 299 2.02e-14 75.5
Msa0678450 MtrunA17_Chr6g0465941 22.941 170 131 0 411 580 1 170 6.20e-13 67.4
Msa0678450 MtrunA17_Chr6g0466121 22.941 170 131 0 411 580 1 170 6.20e-13 67.4
Msa0678450 MtrunA17_Chr6g0465991 22.941 170 131 0 411 580 1 170 6.20e-13 67.4
Msa0678450 MtrunA17_Chr6g0466091 22.941 170 131 0 411 580 1 170 6.20e-13 67.4
Msa0678450 MtrunA17_Chr6g0465881 22.941 170 131 0 411 580 1 170 8.43e-13 67.0
Msa0678450 MtrunA17_Chr5g0445401 44.792 96 44 3 194 285 4 94 2.94e-12 63.2
Msa0678450 MtrunA17_Chr2g0281721 33.981 103 67 1 255 357 26 127 6.40e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0678450 AT3G25820.1 42.549 557 301 10 39 580 40 592 1.33e-148 441
Msa0678450 AT3G25830.1 42.549 557 301 10 39 580 40 592 1.33e-148 441
Msa0678450 AT3G25810.1 41.935 558 294 11 45 580 46 595 1.86e-143 428
Msa0678450 AT2G24210.1 40.860 558 306 11 39 580 39 588 7.25e-142 424
Msa0678450 AT4G16740.1 41.788 548 295 9 46 580 26 562 2.05e-140 419
Msa0678450 AT4G16730.1 38.433 536 311 8 61 580 5 537 1.45e-131 395
Msa0678450 AT4G16730.2 39.879 494 283 6 98 580 1 491 5.48e-129 387
Msa0678450 AT3G25820.2 41.866 418 224 8 8 415 14 422 8.70e-99 308
Msa0678450 AT4G16740.2 44.173 369 187 6 46 402 26 387 8.06e-95 296
Msa0678450 AT5G23960.2 32.051 546 351 8 46 580 7 543 1.29e-87 282
Msa0678450 AT5G23960.1 31.934 548 351 10 46 580 7 545 1.14e-85 277
Msa0678450 AT1G70080.1 33.466 502 311 8 94 581 118 610 1.74e-84 275
Msa0678450 AT3G29410.2 32.033 487 326 4 96 580 13 496 2.18e-83 269
Msa0678450 AT3G29410.1 30.182 550 373 7 38 580 56 601 1.43e-82 270
Msa0678450 AT1G61680.1 32.500 480 313 5 96 570 94 567 1.10e-81 267
Msa0678450 AT4G16740.4 42.442 344 179 6 46 377 26 362 6.98e-80 256
Msa0678450 AT4G16740.3 42.442 344 179 6 46 377 26 362 6.98e-80 256
Msa0678450 AT1G61680.2 31.875 480 309 6 96 570 94 560 6.93e-78 257
Msa0678450 AT3G25820.4 43.119 327 172 7 39 355 40 362 1.85e-76 248
Msa0678450 AT3G25820.3 43.119 327 172 7 39 355 40 362 1.85e-76 248
Msa0678450 AT3G14490.1 30.303 594 375 14 11 580 21 599 9.06e-76 252
Msa0678450 AT1G31950.1 29.121 546 366 8 48 580 67 604 9.83e-76 252
Msa0678450 AT3G14520.1 28.905 557 373 10 38 580 55 602 1.08e-75 252
Msa0678450 AT1G31950.3 30.550 491 331 5 96 580 119 605 1.54e-75 252
Msa0678450 AT1G33750.1 29.412 578 394 7 12 580 29 601 4.22e-75 250
Msa0678450 AT3G14540.1 29.391 558 369 10 38 580 52 599 4.39e-75 250
Msa0678450 AT4G15870.1 29.932 588 378 14 6 580 30 596 4.29e-72 242
Msa0678450 AT5G44630.1 31.818 506 318 9 89 580 63 555 1.27e-71 240
Msa0678450 AT4G20230.2 30.687 466 314 6 105 565 138 599 1.55e-66 228
Msa0678450 AT4G20230.1 30.687 466 314 6 105 565 126 587 1.76e-66 228
Msa0678450 AT1G48800.1 29.784 601 380 16 6 578 16 602 5.94e-66 226
Msa0678450 AT3G32030.1 27.207 555 387 8 37 580 54 602 8.30e-65 223
Msa0678450 AT3G29190.1 28.889 495 345 5 90 580 108 599 1.35e-63 219
Msa0678450 AT4G20210.1 30.018 553 357 13 46 580 58 598 1.94e-63 219
Msa0678450 AT4G20200.1 29.032 496 345 5 90 581 111 603 9.67e-63 218
Msa0678450 AT4G13300.1 29.572 514 344 10 80 581 46 553 2.69e-62 215
Msa0678450 AT3G14540.2 29.194 459 303 8 38 483 52 501 8.78e-60 207
Msa0678450 AT1G31950.2 30.357 392 266 3 96 483 119 507 1.16e-59 207
Msa0678450 AT1G48820.1 29.195 596 344 18 3 575 17 557 3.99e-59 207
Msa0678450 AT2G23230.2 27.320 571 400 9 23 581 32 599 1.80e-58 206
Msa0678450 AT4G13280.2 28.810 479 330 7 108 580 79 552 6.30e-58 203
Msa0678450 AT2G23230.1 27.544 570 395 10 23 581 32 594 1.97e-57 203
Msa0678450 AT1G66020.1 28.974 497 344 6 90 581 105 597 9.42e-57 201
Msa0678450 AT3G29110.1 27.032 566 399 8 25 580 34 595 9.78e-56 198
Msa0678450 AT4G13280.1 28.184 479 303 9 108 580 79 522 8.23e-49 177
Msa0678450 AT5G48110.1 30.793 328 208 6 241 560 2 318 2.04e-43 158
Msa0678450 AT1G79460.1 27.660 517 330 18 96 581 275 778 1.17e-39 155
Msa0678450 AT1G66020.2 34.146 287 180 6 90 371 105 387 1.24e-37 144
Msa0678450 AT1G61120.1 26.996 526 328 18 90 581 280 783 3.20e-36 145
Msa0678450 AT4G02780.1 31.111 270 145 10 98 334 334 595 6.53e-22 100

Find 199 sgRNAs with CRISPR-Local

Find 505 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATATTGGGTTTGTAAT+TGG 0.138471 4_4:+34216565 None:intergenic
GATGACATTTATGATGTTTA+TGG 0.162881 4_4:-34213622 Msa0678450:CDS
CCAATTACAAACCCAATATT+TGG 0.176946 4_4:-34216565 Msa0678450:CDS
ATGAAACTGCCTTAAGATTT+AGG 0.186680 4_4:-34216200 Msa0678450:CDS
AATTGTTTGAATTAATTAAT+TGG 0.198474 4_4:+34211743 None:intergenic
CGATTCTTTGCCATGGTATC+AGG 0.198740 4_4:+34211788 None:intergenic
TTGAGGTAGTCATCAAATTT+TGG 0.199877 4_4:+34212590 None:intergenic
GATATCGTAATTCCAAATAT+TGG 0.205792 4_4:+34216553 None:intergenic
TTATGAAGGAGAACAAATTT+TGG 0.215009 4_4:-34215340 Msa0678450:CDS
ACACATCTGCTATCTATATA+AGG 0.232148 4_4:+34211324 None:intergenic
TTGTATCATAAATTAAATAT+TGG 0.249652 4_4:-34211587 Msa0678450:three_prime_UTR
CACTCCCTCCCCGCGAGGGG+GGG 0.250004 4_4:+34210521 None:intergenic
TAAGGATACTTATGTTATTA+TGG 0.250126 4_4:+34216746 None:intergenic
TTTAGGCTCCTTCGAGAATA+TGG 0.253661 4_4:-34216183 Msa0678450:CDS
TTAGTTTGTGAGTTAGAATA+GGG 0.253883 4_4:-34211393 Msa0678450:three_prime_UTR
GGCTAATGGAATGTTTCTTT+TGG 0.253920 4_4:-34213729 Msa0678450:CDS
GAAACTAGGAAGTGAGTTAA+AGG 0.269615 4_4:+34216694 None:intergenic
TGTATCATAAATTAAATATT+GGG 0.273927 4_4:-34211586 Msa0678450:three_prime_UTR
TTAACATTCCTTTGATATCT+TGG 0.275349 4_4:+34215388 None:intergenic
GGAAGTAAGAAGAATGATTA+AGG 0.279467 4_4:-34216370 Msa0678450:CDS
CATGATCTTCAGAATAATTC+AGG 0.299447 4_4:+34210002 None:intergenic
ACTAAGTTGAGCGTGTTTAT+TGG 0.299535 4_4:-34210472 Msa0678450:three_prime_UTR
ATATCGTAATTCCAAATATT+GGG 0.302500 4_4:+34216554 None:intergenic
CTAAGTTGAGCGTGTTTATT+GGG 0.304336 4_4:-34210471 Msa0678450:three_prime_UTR
AACATTGGATGAATTGTATA+AGG 0.332260 4_4:+34216728 None:intergenic
GTATATGAAGATATTCTTCT+TGG 0.341174 4_4:-34213414 Msa0678450:CDS
GTTAGTTTGTGAGTTAGAAT+AGG 0.342428 4_4:-34211394 Msa0678450:three_prime_UTR
TGCTCGGCAGTTACGGTTGC+GGG 0.346590 4_4:-34211277 Msa0678450:three_prime_UTR
TAATGCAATTCAAATTCTTC+CGG 0.348756 4_4:-34213438 Msa0678450:CDS
AGCTACAACTATGTCTCTAT+TGG 0.358304 4_4:-34209858 Msa0678450:three_prime_UTR
CACATCTGCTATCTATATAA+GGG 0.360944 4_4:+34211325 None:intergenic
TACCCTCACCAAGGTCTTTG+AGG 0.363024 4_4:+34215289 None:intergenic
TGCAGTGGTTCAAACAATAT+TGG 0.363548 4_4:-34216234 Msa0678450:CDS
TGAACAAGTGAATCATTCAT+TGG 0.368214 4_4:-34215250 Msa0678450:CDS
ATATGCTACATGAATGAAAA+TGG 0.368865 4_4:-34211986 Msa0678450:CDS
CACAATGTTGAAATTCAGTT+TGG 0.376462 4_4:+34215128 None:intergenic
GTCTGACTTCTTCCAGAGTC+TGG 0.376772 4_4:+34210092 None:intergenic
AAAGGAGGGGCTTGAGTACT+TGG 0.380341 4_4:-34212495 Msa0678450:CDS
CTCCATGACCATCTCCATAT+TGG 0.381267 4_4:+34211813 None:intergenic
TCTCACTGCACGTACCAATA+TGG 0.388938 4_4:-34211827 Msa0678450:CDS
AGATAGGAGAAGCCCTTGAT+AGG 0.389678 4_4:-34216275 Msa0678450:CDS
AATTAATTAATTCAAACAAT+TGG 0.398842 4_4:-34211741 Msa0678450:exon
AGACTCTGAGGGTCAGGATC+TGG 0.400492 4_4:-34210066 Msa0678450:three_prime_UTR
CATGGCAAAGAATCGAATAA+AGG 0.400991 4_4:-34211780 Msa0678450:CDS
GACACCATCTTGCTTCTTGT+AGG 0.401277 4_4:+34212627 None:intergenic
GACTTCAGACTCTGAGGGTC+AGG 0.404943 4_4:-34210072 Msa0678450:three_prime_UTR
ATTCAAACAATTGGTATCCT+AGG 0.407644 4_4:-34211732 Msa0678450:three_prime_UTR
AACACGCTCAACTTAGTATT+GGG 0.411623 4_4:+34210478 None:intergenic
TATGACACACTTAAAGAAAC+AGG 0.415667 4_4:-34213362 Msa0678450:CDS
ACCATCGAGCTTCAAGACTT+TGG 0.415778 4_4:+34215205 None:intergenic
CACGACCAAAGCTTAACCTT+GGG 0.417065 4_4:+34213755 None:intergenic
GGTTAAGCTTTGGTCGTGAT+AGG 0.419053 4_4:-34213750 Msa0678450:CDS
AATGCACATGGGAATGTTGC+AGG 0.420060 4_4:+34209887 None:intergenic
CTTTGGTCGTGATAGGCTAA+TGG 0.425070 4_4:-34213743 Msa0678450:CDS
TACCGCATAATCGTGTTTCA+AGG 0.426734 4_4:+34216523 None:intergenic
TGTTGTGAGTATAAGCCTTT+GGG 0.433890 4_4:-34210441 Msa0678450:three_prime_UTR
TCGAAGGAGCCTAAATCTTA+AGG 0.435366 4_4:+34216191 None:intergenic
TATCAATTCGAAAAGGAGAT+AGG 0.437146 4_4:-34216291 Msa0678450:CDS
TTATGTCTTAATCAAAGTAT+TGG 0.440202 4_4:-34210203 Msa0678450:three_prime_UTR
TAATTCAGGCTTGATCTTCA+AGG 0.441246 4_4:+34210016 None:intergenic
ACACTCCCTCCCCGCGAGGG+GGG 0.443694 4_4:+34210520 None:intergenic
CATGGGAATGTTGCAGGTAA+TGG 0.446551 4_4:+34209893 None:intergenic
CATAATGAAGGTGGTGGAAA+GGG 0.451688 4_4:-34213789 Msa0678450:intron
AAGTCACTGCTCGGCAGTTA+CGG 0.452368 4_4:-34211284 Msa0678450:three_prime_UTR
CACACTCCCTCCCCGCGAGG+GGG 0.454215 4_4:+34210519 None:intergenic
TTATGATAATATCTTTGAAC+CGG 0.456287 4_4:-34210572 Msa0678450:three_prime_UTR
AAACTACAAATCAAATTTGA+AGG 0.458000 4_4:-34211650 Msa0678450:three_prime_UTR
TGAAATAATTGTAACCTTGT+GGG 0.458710 4_4:-34211361 Msa0678450:three_prime_UTR
GAAGTGGAGAACCATTTCTA+TGG 0.461629 4_4:+34216633 None:intergenic
CTGTTGTGAGTATAAGCCTT+TGG 0.462677 4_4:-34210442 Msa0678450:three_prime_UTR
AATAATCTCAGCCATAGAAA+TGG 0.464760 4_4:-34216644 Msa0678450:CDS
TTCACACTCCCTCCCCGCGA+GGG 0.469491 4_4:+34210517 None:intergenic
TGTCAAAGAAATAGAAATGA+AGG 0.472309 4_4:-34211695 Msa0678450:three_prime_UTR
AAACACGCTCAACTTAGTAT+TGG 0.473581 4_4:+34210477 None:intergenic
CAATGATTTGGCTACTTCAT+CGG 0.474012 4_4:-34212423 Msa0678450:intron
TTGTATGAGCATGGAACGGC+AGG 0.474391 4_4:-34211447 Msa0678450:three_prime_UTR
TCACTAAACTGAGGTTCAAA+TGG 0.478482 4_4:+34213691 None:intergenic
TTGAGCGTGTTTATTGGGCC+TGG 0.478499 4_4:-34210466 Msa0678450:three_prime_UTR
CTAGCCCCAAGGTTAAGCTT+TGG 0.484468 4_4:-34213760 Msa0678450:CDS
CTGCTCGGCAGTTACGGTTG+CGG 0.489013 4_4:-34211278 Msa0678450:three_prime_UTR
TGAAGGTGGTGGAAAGGGAT+GGG 0.497259 4_4:-34213784 Msa0678450:intron
ATGAAGGTGGTGGAAAGGGA+TGG 0.497389 4_4:-34213785 Msa0678450:intron
TCTTCCCTACCTCGTCAAAT+CGG 0.499304 4_4:-34213330 Msa0678450:intron
GATTCTTTGCCATGGTATCA+GGG 0.502496 4_4:+34211789 None:intergenic
TGAAGATATCAGAAGGTCAA+TGG 0.507436 4_4:-34209968 Msa0678450:three_prime_UTR
GCATCATTTCTATCTTATGA+AGG 0.509979 4_4:-34215354 Msa0678450:CDS
AAGGAAGAGTTCAACAACAT+TGG 0.512213 4_4:+34216713 None:intergenic
AGCATTGTAATGTGCAATCA+TGG 0.514621 4_4:-34211240 Msa0678450:three_prime_UTR
CTCGTAGAAACACGGGGCAC+CGG 0.516251 4_4:+34210553 None:intergenic
AATGCATGGGTGTCTGTGTC+CGG 0.517247 4_4:-34212566 Msa0678450:CDS
ACATAATGAAGGTGGTGGAA+AGG 0.517887 4_4:-34213790 Msa0678450:intron
TTCTTCAAATCTCAAGAACT+AGG 0.521875 4_4:-34216674 Msa0678450:CDS
AATGATTCACTTGTTCAAAG+AGG 0.522078 4_4:+34215256 None:intergenic
TTGAAATAATTGTAACCTTG+TGG 0.522983 4_4:-34211362 Msa0678450:three_prime_UTR
CTTTATTCGATTCTTTGCCA+TGG 0.524173 4_4:+34211781 None:intergenic
TAATATTAGTTCAAGTGTGC+AGG 0.525160 4_4:-34210244 Msa0678450:three_prime_UTR
TTGCAGGCGGAGTTAGAAAG+AGG 0.529922 4_4:-34212028 Msa0678450:intron
TCACACTCCCTCCCCGCGAG+GGG 0.530559 4_4:+34210518 None:intergenic
TCTGAAGATCATCCAGACTC+TGG 0.533227 4_4:-34210104 Msa0678450:three_prime_UTR
TATCATAAGAGCAATGACTT+GGG 0.534804 4_4:+34210400 None:intergenic
TCTTGAGATTTGAAGAAACT+AGG 0.535631 4_4:+34216680 None:intergenic
CAAAGCTTAACGTATAATGT+TGG 0.536585 4_4:+34211607 None:intergenic
CTATTATTTGGACTGCCCAA+AGG 0.540426 4_4:+34210426 None:intergenic
TCACGACCAAAGCTTAACCT+TGG 0.543926 4_4:+34213754 None:intergenic
AAGAATATCTTCATATACTC+CGG 0.545115 4_4:+34213419 None:intergenic
TCTCAGTTATCAATTCGAAA+AGG 0.545405 4_4:-34216298 Msa0678450:CDS
GGATAGATATCATGCTATGT+TGG 0.548300 4_4:-34210339 Msa0678450:three_prime_UTR
TCAGGATCTGGACAAGCTAA+AGG 0.549835 4_4:-34210054 Msa0678450:three_prime_UTR
TATGGTTATGATGTTTCACC+AGG 0.556636 4_4:-34216165 Msa0678450:intron
CTCGATACGTGGATAGGAGT+AGG 0.559477 4_4:-34216404 Msa0678450:CDS
TTATCATAAGAGCAATGACT+TGG 0.560016 4_4:+34210399 None:intergenic
TCATGGAGCCCCTGATACCA+TGG 0.560232 4_4:-34211798 Msa0678450:CDS
AAGGTCTTTGAGGTGGATGC+TGG 0.562048 4_4:+34215299 None:intergenic
ATGTGTATGTCGTTAACGAC+AGG 0.562303 4_4:-34211307 Msa0678450:three_prime_UTR
GTATCATAAATTAAATATTG+GGG 0.564825 4_4:-34211585 Msa0678450:three_prime_UTR
CATTCCTACAAGAAGCAAGA+TGG 0.565878 4_4:-34212631 Msa0678450:CDS
TAGGAGTAGGAGGATGCAAG+AGG 0.567410 4_4:-34216391 Msa0678450:CDS
CAGTTTAGTGATATCCGCAA+GGG 0.569414 4_4:-34213679 Msa0678450:CDS
CTTTGGACTCTACGATGTAG+TGG 0.570277 4_4:+34215222 None:intergenic
TTTCAGTGAAGGTACAAAGA+AGG 0.571747 4_4:-34209938 Msa0678450:three_prime_UTR
ATGACTACCTCAACAATGCA+TGG 0.572804 4_4:-34212580 Msa0678450:CDS
GTTAGCTGTTTGTATGAGCA+TGG 0.574225 4_4:-34211456 Msa0678450:three_prime_UTR
TTAGTAGCGTAACATAGAAG+TGG 0.576392 4_4:+34216617 None:intergenic
AAACTAACTTGAACGTCAGA+TGG 0.577363 4_4:+34211409 None:intergenic
TGTGCAATCAACTTTACAAG+AGG 0.577934 4_4:-34215109 Msa0678450:CDS
TTGAACGTCAGATGGTATGC+AGG 0.578031 4_4:+34211417 None:intergenic
GTTCAAAGATATTATCATAA+CGG 0.579399 4_4:+34210575 None:intergenic
TCCAAAGTCTTGAAGCTCGA+TGG 0.580370 4_4:-34215206 Msa0678450:CDS
AATCGTAACATAACAAAGGA+GGG 0.583261 4_4:-34212509 Msa0678450:CDS
TAGTTTGTGAGTTAGAATAG+GGG 0.584914 4_4:-34211392 Msa0678450:three_prime_UTR
CAACAAAATGATGTTCGCTA+TGG 0.587355 4_4:-34211482 Msa0678450:three_prime_UTR
GTATGAGCATGGAACGGCAG+GGG 0.587938 4_4:-34211445 Msa0678450:three_prime_UTR
AGGATGCTCGATACGTGGAT+AGG 0.588378 4_4:-34216410 Msa0678450:CDS
ATCATAAGAGCAATGACTTG+GGG 0.589886 4_4:+34210401 None:intergenic
ATCAATTAAAGTAATTAGAG+AGG 0.591094 4_4:+34213642 None:intergenic
AGCATCCACCTCAAAGACCT+TGG 0.592448 4_4:-34215297 Msa0678450:CDS
ATCGATACTGTGAAACACTT+AGG 0.593154 4_4:-34216321 Msa0678450:CDS
AACTACAAATCAAATTTGAA+GGG 0.594026 4_4:-34211649 Msa0678450:three_prime_UTR
ATCCTTGAAACACGATTATG+CGG 0.595568 4_4:-34216525 Msa0678450:intron
GCGGAGTTAGAAAGAGGTGA+AGG 0.597815 4_4:-34212022 Msa0678450:CDS
AGTCAGACTTCAGACTCTGA+GGG 0.598311 4_4:-34210077 Msa0678450:three_prime_UTR
CATGATATCTATCCTCACAT+AGG 0.598819 4_4:+34210348 None:intergenic
TTATGATGTTTATGGCACCT+TGG 0.599831 4_4:-34213614 Msa0678450:CDS
TCATACCGATTTGACGAGGT+AGG 0.603054 4_4:+34213325 None:intergenic
ACAAATACTAATATATACCT+AGG 0.604511 4_4:+34211715 None:intergenic
ATCGTAACATAACAAAGGAG+GGG 0.606500 4_4:-34212508 Msa0678450:CDS
GCTTATACTCACAACAGTCC+AGG 0.606623 4_4:+34210448 None:intergenic
GCTAAATCGTAACATAACAA+AGG 0.606945 4_4:-34212513 Msa0678450:CDS
TGAAGGTATATGTTAGTGTG+AGG 0.607100 4_4:-34211678 Msa0678450:three_prime_UTR
AATGGAGTAGTGGTCGTACA+AGG 0.607161 4_4:+34209911 None:intergenic
AAGTCAGACTTCAGACTCTG+AGG 0.608058 4_4:-34210078 Msa0678450:three_prime_UTR
ATTCTTTGCCATGGTATCAG+GGG 0.608231 4_4:+34211790 None:intergenic
TGTTATCATCAAAACTCAAG+AGG 0.610681 4_4:+34210294 None:intergenic
AAATCGTAACATAACAAAGG+AGG 0.612370 4_4:-34212510 Msa0678450:CDS
AGGATCTTAAAGAAATGTCA+AGG 0.612713 4_4:-34215089 Msa0678450:intron
TCATAAGAGCAATGACTTGG+GGG 0.613326 4_4:+34210402 None:intergenic
TCAGTTTAGTGATATCCGCA+AGG 0.615276 4_4:-34213680 Msa0678450:CDS
GAAGGTATATGTTAGTGTGA+GGG 0.616393 4_4:-34211677 Msa0678450:three_prime_UTR
GTGGATGCTGGTGAAAGCAT+TGG 0.617344 4_4:+34215311 None:intergenic
TGTCTTGTCCAAGATATCAA+AGG 0.617651 4_4:-34215396 Msa0678450:CDS
CATCATAACCATATTCTCGA+AGG 0.619092 4_4:+34216175 None:intergenic
TTTCTAGGATGCTCGATACG+TGG 0.619384 4_4:-34216415 Msa0678450:intron
CATACCGATTTGACGAGGTA+GGG 0.619671 4_4:+34213326 None:intergenic
ATGGATGTCACTTTCAGTGA+AGG 0.620761 4_4:-34209949 Msa0678450:three_prime_UTR
CTTCACACTCCCTCCCCGCG+AGG 0.623301 4_4:+34210516 None:intergenic
TACCAATATGGAGATGGTCA+TGG 0.623302 4_4:-34211815 Msa0678450:CDS
CCTCACCAAGGTCTTTGAGG+TGG 0.624819 4_4:+34215292 None:intergenic
CACCTCAAAGACCTTGGTGA+GGG 0.625179 4_4:-34215291 Msa0678450:CDS
TGCACGTACCAATATGGAGA+TGG 0.629166 4_4:-34211821 Msa0678450:CDS
TGTTGCAGGTAATGGAGTAG+TGG 0.629348 4_4:+34209901 None:intergenic
CTGTTTGTATGAGCATGGAA+CGG 0.634406 4_4:-34211451 Msa0678450:three_prime_UTR
AACGACAGGAAGTCACTGCT+CGG 0.636700 4_4:-34211293 Msa0678450:three_prime_UTR
GAATGAAAATGGTGTTAGTG+AGG 0.637998 4_4:-34211975 Msa0678450:CDS
ACATCTGCTATCTATATAAG+GGG 0.639465 4_4:+34211326 None:intergenic
ATGACTCTGAAGATATCAGA+AGG 0.642472 4_4:-34209975 Msa0678450:three_prime_UTR
TGCAGTGAGAAATTCTAGCA+AGG 0.643300 4_4:+34211840 None:intergenic
GAGAAGTTTAAGGACCACAA+TGG 0.643979 4_4:-34215432 Msa0678450:CDS
GTAGCTTCGTACAATGCACA+TGG 0.646107 4_4:+34209875 None:intergenic
CATAAGAGCAATGACTTGGG+GGG 0.646378 4_4:+34210403 None:intergenic
TGTATGAGCATGGAACGGCA+GGG 0.648227 4_4:-34211446 Msa0678450:three_prime_UTR
CAATAGTGATGTCCTATGTG+AGG 0.654917 4_4:-34210360 Msa0678450:three_prime_UTR
CTGGACAAGCTAAAGGACAA+AGG 0.655154 4_4:-34210047 Msa0678450:three_prime_UTR
GATACGTGGATAGGAGTAGG+AGG 0.665547 4_4:-34216401 Msa0678450:CDS
GGACTTTACAATGTCCCACA+AGG 0.668562 4_4:+34211347 None:intergenic
CAGACACCCATGCATTGTTG+AGG 0.669111 4_4:+34212573 None:intergenic
AAGGGATGGGACTAGCCCCA+AGG 0.669425 4_4:-34213771 Msa0678450:CDS
CCACCTCAAAGACCTTGGTG+AGG 0.671084 4_4:-34215292 Msa0678450:CDS
ATGCCTTAAAATCTCCATTG+TGG 0.671659 4_4:+34215418 None:intergenic
TGAAAATGGTGTTAGTGAGG+AGG 0.675695 4_4:-34211972 Msa0678450:CDS
TGACTACCTCAACAATGCAT+GGG 0.680426 4_4:-34212579 Msa0678450:CDS
ATGGGTGAGTAAAACTACAC+CGG 0.689202 4_4:+34212547 None:intergenic
ACGACCAAAGCTTAACCTTG+GGG 0.696222 4_4:+34213756 None:intergenic
TACTGCTTCTACCCTCACCA+AGG 0.698930 4_4:+34215280 None:intergenic
TTGGTCATACCGATTTGACG+AGG 0.701179 4_4:+34213321 None:intergenic
TAGCTTCGTACAATGCACAT+GGG 0.720234 4_4:+34209876 None:intergenic
GGGGTGCTCGTAGAAACACG+GGG 0.732098 4_4:+34210547 None:intergenic
TTGCGGATATCACTAAACTG+AGG 0.739679 4_4:+34213682 None:intergenic
AGGAATGTTAAGTCTCTACG+AGG 0.767381 4_4:-34215376 Msa0678450:CDS
ATTGTAATGTGCAATCATGG+AGG 0.773433 4_4:-34211237 Msa0678450:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATATTATATATAAAT+AGG - chr4_4:34211828-34211847 Msa0678450:CDS 0.0%
!! AAATATATTATATATAAATA+GGG - chr4_4:34211829-34211848 Msa0678450:CDS 0.0%
!!! TTATATTTTGTATTATTTCT+AGG - chr4_4:34210090-34210109 Msa0678450:three_prime_UTR 10.0%
!!! TAGATATTTTACAAAATTAA+CGG + chr4_4:34210764-34210783 None:intergenic 10.0%
!!! TTTTTTTTTTTACAAATTTG+AGG + chr4_4:34211793-34211812 None:intergenic 10.0%
!!! TGTATTTTTATTTTTCATTT+TGG + chr4_4:34211875-34211894 None:intergenic 10.0%
!!! TTTTTTTTTTTACATAATGA+AGG - chr4_4:34212719-34212738 Msa0678450:intron 10.0%
!! AAATTATTTAACAAATCAAT+TGG + chr4_4:34214473-34214492 None:intergenic 10.0%
!! AATTGTTTGAATTAATTAAT+TGG + chr4_4:34214780-34214799 None:intergenic 10.0%
!! AATTAATTAATTCAAACAAT+TGG - chr4_4:34214779-34214798 Msa0678450:intron 10.0%
!! TTGTATCATAAATTAAATAT+TGG - chr4_4:34214933-34214952 Msa0678450:intron 10.0%
!! TGTATCATAAATTAAATATT+GGG - chr4_4:34214934-34214953 Msa0678450:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_4:34215880-34215899 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_4:34215880-34215899 None:intergenic 100.0%
!!! ATATTGATTCATATGAAAAA+AGG - chr4_4:34211338-34211357 Msa0678450:three_prime_UTR 15.0%
!! TAAGATAATATTAAATTCTC+AGG + chr4_4:34211560-34211579 None:intergenic 15.0%
!!! TAAAAGAGTCTTATATTATA+TGG + chr4_4:34211639-34211658 None:intergenic 15.0%
!! GTATAATATGTTAGTAAAAA+AGG + chr4_4:34212614-34212633 None:intergenic 15.0%
!! AAAATTATGTTTATTTCAGT+TGG - chr4_4:34213054-34213073 Msa0678450:intron 15.0%
!! AAATTATGTTTATTTCAGTT+GGG - chr4_4:34213055-34213074 Msa0678450:intron 15.0%
!!! CCAAATATTTTTTTTTTTGA+AGG + chr4_4:34213264-34213283 None:intergenic 15.0%
!! CCTTCAAAAAAAAAAATATT+TGG - chr4_4:34213261-34213280 Msa0678450:intron 15.0%
!!! GTTTTTTTTAGAGAAAAAAT+TGG + chr4_4:34213675-34213694 None:intergenic 15.0%
!!! TTGTACTAATAATTTTCATT+TGG - chr4_4:34213792-34213811 Msa0678450:intron 15.0%
!!! AATTTTCATTAAGCAATTTT+TGG + chr4_4:34214590-34214609 None:intergenic 15.0%
!! AAAAATTGCTTAATGAAAAT+TGG - chr4_4:34214589-34214608 Msa0678450:intron 15.0%
!! GTATCATAAATTAAATATTG+GGG - chr4_4:34214935-34214954 Msa0678450:intron 15.0%
!!! CAAATGTTAATTTTTGTATA+AGG - chr4_4:34214960-34214979 Msa0678450:intron 15.0%
!!! TTATGATAATATTTTTGAAC+CGG - chr4_4:34215309-34215328 Msa0678450:CDS 15.0%
!! ACATAAAAAATTATAGTCTA+TGG + chr4_4:34216303-34216322 None:intergenic 15.0%
!! TAAGGATACTTATGTTATTA+TGG + chr4_4:34209777-34209796 None:intergenic 20.0%
!! ATATCGTAATTCCAAATATT+GGG + chr4_4:34209969-34209988 None:intergenic 20.0%
!!! TTTTTTGTCAAATAGTTTAG+TGG - chr4_4:34210030-34210049 Msa0678450:three_prime_UTR 20.0%
!! AAAAGATAAAAACCTATCAA+GGG + chr4_4:34210260-34210279 None:intergenic 20.0%
!! ATTATTCTTACCATATTAGT+TGG - chr4_4:34210426-34210445 Msa0678450:three_prime_UTR 20.0%
!! TTATTCTTACCATATTAGTT+GGG - chr4_4:34210427-34210446 Msa0678450:three_prime_UTR 20.0%
!!! ATTTTTTTTCCCAACTAATA+TGG + chr4_4:34210439-34210458 None:intergenic 20.0%
!!! TTCATGATATATATTTTCAC+TGG - chr4_4:34210567-34210586 Msa0678450:three_prime_UTR 20.0%
!!! ACCACTAAAAAAGATTTTTA+AGG - chr4_4:34210868-34210887 Msa0678450:intron 20.0%
!!! ACCTTAAAAATCTTTTTTAG+TGG + chr4_4:34210872-34210891 None:intergenic 20.0%
!!! AGACACTTTACAATTTTATT+AGG - chr4_4:34210892-34210911 Msa0678450:intron 20.0%
!! TGGAAATTCTATTCAAAATT+GGG + chr4_4:34210919-34210938 None:intergenic 20.0%
!! ATGGAAATTCTATTCAAAAT+TGG + chr4_4:34210920-34210939 None:intergenic 20.0%
!!! AGATGTTTTTCTATATGATT+AGG - chr4_4:34211022-34211041 Msa0678450:intron 20.0%
!!! AGATATTTTTGAGAAGTTTA+AGG - chr4_4:34211078-34211097 Msa0678450:intron 20.0%
!! CTAATTCGACAAATAATAAT+GGG + chr4_4:34211479-34211498 None:intergenic 20.0%
!! TCTAATTCGACAAATAATAA+TGG + chr4_4:34211480-34211499 None:intergenic 20.0%
!!! GATTTTGATTTTGATATTGT+TGG - chr4_4:34211498-34211517 Msa0678450:three_prime_UTR 20.0%
!! TCTTATATTATATGGAAAAG+TGG + chr4_4:34211631-34211650 None:intergenic 20.0%
!! AAAACATATTTATTCTTGTG+TGG - chr4_4:34211673-34211692 Msa0678450:three_prime_UTR 20.0%
!!! TTTTTTACTCAAGTACTTTT+AGG + chr4_4:34212047-34212066 None:intergenic 20.0%
!! AGTACTTGAGTAAAAAAAAT+TGG - chr4_4:34212050-34212069 Msa0678450:intron 20.0%
!! TAATGTATTGCTAAAAAACA+TGG + chr4_4:34212590-34212609 None:intergenic 20.0%
!!! TTTTTTTTACATAATGAAGG+TGG - chr4_4:34212722-34212741 Msa0678450:intron 20.0%
!! ATCAATTAAAGTAATTAGAG+AGG + chr4_4:34212881-34212900 None:intergenic 20.0%
!!! TTAAATTTTGAGCAAAACTA+AGG - chr4_4:34213304-34213323 Msa0678450:intron 20.0%
!!! TAAATTTTGAGCAAAACTAA+GGG - chr4_4:34213305-34213324 Msa0678450:intron 20.0%
!! TGGCTAAATAATTTAGATTT+AGG - chr4_4:34213375-34213394 Msa0678450:CDS 20.0%
!!! AATAAAGTCTAAAATTTGGT+GGG + chr4_4:34213511-34213530 None:intergenic 20.0%
!!! TAATAAAGTCTAAAATTTGG+TGG + chr4_4:34213512-34213531 None:intergenic 20.0%
!!! ACCAAATTTTAGACTTTATT+AGG - chr4_4:34213511-34213530 Msa0678450:intron 20.0%
!!! CCAAATTTTAGACTTTATTA+GGG - chr4_4:34213512-34213531 Msa0678450:intron 20.0%
!!! TTTTTAGAGAAAAAATTGGA+GGG + chr4_4:34213671-34213690 None:intergenic 20.0%
!!! TTTTTTAGAGAAAAAATTGG+AGG + chr4_4:34213672-34213691 None:intergenic 20.0%
!! TTGAATAGATAAAATTTGGA+GGG + chr4_4:34213697-34213716 None:intergenic 20.0%
!! ACAGTTGAATAGATAAAATT+TGG + chr4_4:34213701-34213720 None:intergenic 20.0%
!! GTGTGATCATAAATATATTA+TGG + chr4_4:34213735-34213754 None:intergenic 20.0%
!! GTTATACTAATATTTAGACA+TGG - chr4_4:34213828-34213847 Msa0678450:intron 20.0%
!! ATTTAGCAAAAAATAGGAAT+GGG + chr4_4:34213994-34214013 None:intergenic 20.0%
!! TATATGATAATATGCATGTA+TGG + chr4_4:34214151-34214170 None:intergenic 20.0%
!!! GATTTGTTAAATAATTTTGC+AGG - chr4_4:34214476-34214495 Msa0678450:intron 20.0%
!! ACAAATACTAATATATACCT+AGG + chr4_4:34214808-34214827 None:intergenic 20.0%
!! AAACTACAAATCAAATTTGA+AGG - chr4_4:34214870-34214889 Msa0678450:intron 20.0%
!! AACTACAAATCAAATTTGAA+GGG - chr4_4:34214871-34214890 Msa0678450:intron 20.0%
!!! TAAGAAAAACAATTTTCCAA+AGG + chr4_4:34215449-34215468 None:intergenic 20.0%
!! GTTCAAAGATATTATCATAA+CGG + chr4_4:34215948-34215967 None:intergenic 20.0%
!! TTATGATAATATCTTTGAAC+CGG - chr4_4:34215948-34215967 Msa0678450:intron 20.0%
!! TTATGTCTTAATCAAAGTAT+TGG - chr4_4:34216317-34216336 Msa0678450:CDS 20.0%
! AACATTGGATGAATTGTATA+AGG + chr4_4:34209795-34209814 None:intergenic 25.0%
! GATATCGTAATTCCAAATAT+TGG + chr4_4:34209970-34209989 None:intergenic 25.0%
! CAAAAGATAAAAACCTATCA+AGG + chr4_4:34210261-34210280 None:intergenic 25.0%
!!! TTATCTTTTGAAAAATGCAG+TGG - chr4_4:34210271-34210290 Msa0678450:three_prime_UTR 25.0%
! CTGTTTATCATATACTACAA+TGG + chr4_4:34210833-34210852 None:intergenic 25.0%
! CATTGTAGTATATGATAAAC+AGG - chr4_4:34210831-34210850 Msa0678450:intron 25.0%
!!! TAGCTTTCTGAAACTAAAAA+TGG + chr4_4:34210939-34210958 None:intergenic 25.0%
! AAAAAAGATCTTCATCATTG+TGG + chr4_4:34211049-34211068 None:intergenic 25.0%
! TTAACATTCCTTTGATATCT+TGG + chr4_4:34211135-34211154 None:intergenic 25.0%
!! TTATGAAGGAGAACAAATTT+TGG - chr4_4:34211180-34211199 Msa0678450:intron 25.0%
! TGATTCATATGAAAAAAGGA+AGG - chr4_4:34211342-34211361 Msa0678450:three_prime_UTR 25.0%
!!! TTGATTTTGATATTGTTGGT+TGG - chr4_4:34211502-34211521 Msa0678450:three_prime_UTR 25.0%
!! TACAAATTTGAGGTAAATCA+GGG + chr4_4:34211783-34211802 None:intergenic 25.0%
!! TTACAAATTTGAGGTAAATC+AGG + chr4_4:34211784-34211803 None:intergenic 25.0%
!!! TTTCATTTTGGTGTAATACT+TGG + chr4_4:34211863-34211882 None:intergenic 25.0%
! TTGAAGCAATAAATCATTGT+CGG + chr4_4:34211969-34211988 None:intergenic 25.0%
! GAACATTAACAAATCAAAAC+AGG - chr4_4:34212260-34212279 Msa0678450:intron 25.0%
! GATGACATTTATGATGTTTA+TGG - chr4_4:34212898-34212917 Msa0678450:intron 25.0%
! TAATGCAATTCAAATTCTTC+CGG - chr4_4:34213082-34213101 Msa0678450:intron 25.0%
! AAGAATATCTTCATATACTC+CGG + chr4_4:34213104-34213123 None:intergenic 25.0%
! GTATATGAAGATATTCTTCT+TGG - chr4_4:34213106-34213125 Msa0678450:intron 25.0%
! GCAAAATTTGTATATTCACA+TGG - chr4_4:34213355-34213374 Msa0678450:CDS 25.0%
! AATTTAGATTTAGGTACACA+TGG - chr4_4:34213384-34213403 Msa0678450:CDS 25.0%
!! CCCTAATAAAGTCTAAAATT+TGG + chr4_4:34213515-34213534 None:intergenic 25.0%
! ATAATTTAGCTGTTAAGAAC+TGG + chr4_4:34213560-34213579 None:intergenic 25.0%
! GTTGAATAGATAAAATTTGG+AGG + chr4_4:34213698-34213717 None:intergenic 25.0%
! GATTTAGCAAAAAATAGGAA+TGG + chr4_4:34213995-34214014 None:intergenic 25.0%
! GTTACGATTTAGCAAAAAAT+AGG + chr4_4:34214000-34214019 None:intergenic 25.0%
! ATTGCAAAGTCGAAAAATTA+TGG + chr4_4:34214081-34214100 None:intergenic 25.0%
!!! ATAGATGTGCAACTTTTTTT+TGG + chr4_4:34214216-34214235 None:intergenic 25.0%
! CACATTTCAACTCAATTATA+AGG - chr4_4:34214429-34214448 Msa0678450:intron 25.0%
! AATCAATTGGATTGATTACT+CGG + chr4_4:34214460-34214479 None:intergenic 25.0%
!! TTGTTAAATAATTTTGCAGG+CGG - chr4_4:34214479-34214498 Msa0678450:intron 25.0%
! ATATGCTACATGAATGAAAA+TGG - chr4_4:34214534-34214553 Msa0678450:intron 25.0%
!!! TCTGAAAAATATTTTGAGGA+AGG + chr4_4:34214648-34214667 None:intergenic 25.0%
!!! TGTCTCTGAAAAATATTTTG+AGG + chr4_4:34214652-34214671 None:intergenic 25.0%
! TGTCAAAGAAATAGAAATGA+AGG - chr4_4:34214825-34214844 Msa0678450:intron 25.0%
!!! TTAGTTTGTGAGTTAGAATA+GGG - chr4_4:34215127-34215146 Msa0678450:CDS 25.0%
! TTGAAATAATTGTAACCTTG+TGG - chr4_4:34215158-34215177 Msa0678450:CDS 25.0%
! TGAAATAATTGTAACCTTGT+GGG - chr4_4:34215159-34215178 Msa0678450:CDS 25.0%
!! AACCAGAATATGAAGTTTTT+GGG + chr4_4:34215587-34215606 None:intergenic 25.0%
!! AAACCAGAATATGAAGTTTT+TGG + chr4_4:34215588-34215607 None:intergenic 25.0%
! GTGATTTACTTGAAGAAATT+GGG + chr4_4:34215681-34215700 None:intergenic 25.0%
! TGTGATTTACTTGAAGAAAT+TGG + chr4_4:34215682-34215701 None:intergenic 25.0%
!! TTGAGCAAAATGTAAGTTTT+AGG - chr4_4:34215766-34215785 Msa0678450:intron 25.0%
! TTAGAGAGTCGTAAAAATAA+AGG + chr4_4:34216738-34216757 None:intergenic 25.0%
TCTTGAGATTTGAAGAAACT+AGG + chr4_4:34209843-34209862 None:intergenic 30.0%
TTCTTCAAATCTCAAGAACT+AGG - chr4_4:34209846-34209865 Msa0678450:three_prime_UTR 30.0%
AATAATCTCAGCCATAGAAA+TGG - chr4_4:34209876-34209895 Msa0678450:three_prime_UTR 30.0%
CCAAATATTGGGTTTGTAAT+TGG + chr4_4:34209958-34209977 None:intergenic 30.0%
CCAATTACAAACCCAATATT+TGG - chr4_4:34209955-34209974 Msa0678450:three_prime_UTR 30.0%
GGAAGTAAGAAGAATGATTA+AGG - chr4_4:34210150-34210169 Msa0678450:three_prime_UTR 30.0%
TCTCAGTTATCAATTCGAAA+AGG - chr4_4:34210222-34210241 Msa0678450:three_prime_UTR 30.0%
TATCAATTCGAAAAGGAGAT+AGG - chr4_4:34210229-34210248 Msa0678450:three_prime_UTR 30.0%
ATGAAACTGCCTTAAGATTT+AGG - chr4_4:34210320-34210339 Msa0678450:three_prime_UTR 30.0%
ACTACAATGGTACAGTATTT+AGG + chr4_4:34210820-34210839 None:intergenic 30.0%
GCATCATTTCTATCTTATGA+AGG - chr4_4:34211166-34211185 Msa0678450:intron 30.0%
AATGATTCACTTGTTCAAAG+AGG + chr4_4:34211267-34211286 None:intergenic 30.0%
TGAACAAGTGAATCATTCAT+TGG - chr4_4:34211270-34211289 Msa0678450:three_prime_UTR 30.0%
CACAATGTTGAAATTCAGTT+TGG + chr4_4:34211395-34211414 None:intergenic 30.0%
AGGATCTTAAAGAAATGTCA+AGG - chr4_4:34211431-34211450 Msa0678450:three_prime_UTR 30.0%
!! TTGATATTGTTGGTTGGTAA+AGG - chr4_4:34211508-34211527 Msa0678450:three_prime_UTR 30.0%
! TTTTCTCCGTCTTACAAATT+TGG + chr4_4:34212209-34212228 None:intergenic 30.0%
AAATTTGTAAGACGGAGAAA+AGG - chr4_4:34212208-34212227 Msa0678450:intron 30.0%
! TTTTTACATAATGAAGGTGG+TGG - chr4_4:34212725-34212744 Msa0678450:intron 30.0%
! GCTAATGGAATGTTTCTTTT+GGG - chr4_4:34212792-34212811 Msa0678450:intron 30.0%
! AAAAAGCTCTAATTCATCCA+AGG + chr4_4:34212926-34212945 None:intergenic 30.0%
! ATTAGAGCTTTTTACAACTG+CGG - chr4_4:34212933-34212952 Msa0678450:intron 30.0%
TATGACACACTTAAAGAAAC+AGG - chr4_4:34213158-34213177 Msa0678450:intron 30.0%
! ACGTGGTTTTTATGTGAATT+TGG + chr4_4:34213221-34213240 None:intergenic 30.0%
TAAAAACCACGTTCACAAAA+TGG - chr4_4:34213229-34213248 Msa0678450:intron 30.0%
ATTTGGTTAGAACATGTCTT+AGG - chr4_4:34213278-34213297 Msa0678450:intron 30.0%
TTTGGTTAGAACATGTCTTA+GGG - chr4_4:34213279-34213298 Msa0678450:intron 30.0%
! GCTTTTCCAATAAATTACAG+TGG - chr4_4:34213850-34213869 Msa0678450:intron 30.0%
ATCAGACCACTGTAATTTAT+TGG + chr4_4:34213859-34213878 None:intergenic 30.0%
! TTGAGGTAGTCATCAAATTT+TGG + chr4_4:34213933-34213952 None:intergenic 30.0%
GCTAAATCGTAACATAACAA+AGG - chr4_4:34214007-34214026 Msa0678450:intron 30.0%
AAATCGTAACATAACAAAGG+AGG - chr4_4:34214010-34214029 Msa0678450:intron 30.0%
AATCGTAACATAACAAAGGA+GGG - chr4_4:34214011-34214030 Msa0678450:intron 30.0%
CAAAGTCGAAAAATTATGGA+CGG + chr4_4:34214077-34214096 None:intergenic 30.0%
! TTTTCGACTTTGCAATGATT+TGG - chr4_4:34214085-34214104 Msa0678450:intron 30.0%
TGATAATATGCATGTATGGA+CGG + chr4_4:34214147-34214166 None:intergenic 30.0%
TTCAGTGTAATTACAAGTGT+TGG - chr4_4:34214314-34214333 Msa0678450:intron 30.0%
ATTCAAACAATTGGTATCCT+AGG - chr4_4:34214788-34214807 Msa0678450:intron 30.0%
CAAAGCTTAACGTATAATGT+TGG + chr4_4:34214916-34214935 None:intergenic 30.0%
!! GTTAGTTTGTGAGTTAGAAT+AGG - chr4_4:34215126-34215145 Msa0678450:CDS 30.0%
! TAGTTTGTGAGTTAGAATAG+GGG - chr4_4:34215128-34215147 Msa0678450:CDS 30.0%
ACATCTGCTATCTATATAAG+GGG + chr4_4:34215197-34215216 None:intergenic 30.0%
CACATCTGCTATCTATATAA+GGG + chr4_4:34215198-34215217 None:intergenic 30.0%
ACACATCTGCTATCTATATA+AGG + chr4_4:34215199-34215218 None:intergenic 30.0%
TAATCAACCCAATACTAAGT+TGG - chr4_4:34215387-34215406 Msa0678450:CDS 30.0%
AAAAGCTTCCTAATAACACA+TGG - chr4_4:34215473-34215492 Msa0678450:intron 30.0%
!! GGTATTTTCCATGTGTTATT+AGG + chr4_4:34215484-34215503 None:intergenic 30.0%
AACCCAAAAACTTCATATTC+TGG - chr4_4:34215582-34215601 Msa0678450:intron 30.0%
TTCCTATTTACATGCAATGT+AGG - chr4_4:34215716-34215735 Msa0678450:intron 30.0%
AACCTACATTGCATGTAAAT+AGG + chr4_4:34215721-34215740 None:intergenic 30.0%
ACACACAAATGTACAATCAT+GGG - chr4_4:34215922-34215941 Msa0678450:intron 30.0%
TATCATAAGAGCAATGACTT+GGG + chr4_4:34216123-34216142 None:intergenic 30.0%
TTATCATAAGAGCAATGACT+TGG + chr4_4:34216124-34216143 None:intergenic 30.0%
TGTTATCATCAAAACTCAAG+AGG + chr4_4:34216229-34216248 None:intergenic 30.0%
TAATATTAGTTCAAGTGTGC+AGG - chr4_4:34216276-34216295 Msa0678450:CDS 30.0%
CATGATCTTCAGAATAATTC+AGG + chr4_4:34216521-34216540 None:intergenic 30.0%
AAGGAAGAGTTCAACAACAT+TGG + chr4_4:34209810-34209829 None:intergenic 35.0%
GAAACTAGGAAGTGAGTTAA+AGG + chr4_4:34209829-34209848 None:intergenic 35.0%
TTAGTAGCGTAACATAGAAG+TGG + chr4_4:34209906-34209925 None:intergenic 35.0%
ATCCTTGAAACACGATTATG+CGG - chr4_4:34209995-34210014 Msa0678450:three_prime_UTR 35.0%
ATCGATACTGTGAAACACTT+AGG - chr4_4:34210199-34210218 Msa0678450:three_prime_UTR 35.0%
TGCAGTGGTTCAAACAATAT+TGG - chr4_4:34210286-34210305 Msa0678450:three_prime_UTR 35.0%
CATCATAACCATATTCTCGA+AGG + chr4_4:34210348-34210367 None:intergenic 35.0%
TATGGTTATGATGTTTCACC+AGG - chr4_4:34210355-34210374 Msa0678450:three_prime_UTR 35.0%
ATGCCTTAAAATCTCCATTG+TGG + chr4_4:34211105-34211124 None:intergenic 35.0%
TGTCTTGTCCAAGATATCAA+AGG - chr4_4:34211124-34211143 Msa0678450:intron 35.0%
TGTGCAATCAACTTTACAAG+AGG - chr4_4:34211411-34211430 Msa0678450:three_prime_UTR 35.0%
TAACTACAGTAGGACATGAT+GGG + chr4_4:34211731-34211750 None:intergenic 35.0%
ATAACTACAGTAGGACATGA+TGG + chr4_4:34211732-34211751 None:intergenic 35.0%
ATCATGTCCTACTGTAGTTA+TGG - chr4_4:34211731-34211750 Msa0678450:three_prime_UTR 35.0%
TCACAAACCATAACTACAGT+AGG + chr4_4:34211741-34211760 None:intergenic 35.0%
! CTGTAGTTATGGTTTGTGAA+TGG - chr4_4:34211742-34211761 Msa0678450:exon 35.0%
!!! AGTGTTGTTGATTTTTCGCT+GGG + chr4_4:34211906-34211925 None:intergenic 35.0%
! CAATTTTCCATTACCACCAA+CGG - chr4_4:34211928-34211947 Msa0678450:CDS 35.0%
! CTCAAGTACTTTTAGGCTTT+TGG + chr4_4:34212040-34212059 None:intergenic 35.0%
!! ATCACTTTTGATTCGAGATC+AGG + chr4_4:34212078-34212097 None:intergenic 35.0%
!! TGATTTGTTAATGTTCGAGC+TGG + chr4_4:34212256-34212275 None:intergenic 35.0%
! TTGTGTTGATAAGGTGTTAG+TGG + chr4_4:34212313-34212332 None:intergenic 35.0%
! GGCTAATGGAATGTTTCTTT+TGG - chr4_4:34212791-34212810 Msa0678450:intron 35.0%
TCACTAAACTGAGGTTCAAA+TGG + chr4_4:34212832-34212851 None:intergenic 35.0%
! ACACTTTTGTTAAACCCTTG+CGG + chr4_4:34212858-34212877 None:intergenic 35.0%
TTATGATGTTTATGGCACCT+TGG - chr4_4:34212906-34212925 Msa0678450:intron 35.0%
! TTTTTACAACTGCGGTAGAA+AGG - chr4_4:34212941-34212960 Msa0678450:intron 35.0%
! TTCTAACCATTTTGTGAACG+TGG + chr4_4:34213238-34213257 None:intergenic 35.0%
! AAAAACCGCGTTTAAAGTCT+TGG + chr4_4:34213440-34213459 None:intergenic 35.0%
ATCGTAACATAACAAAGGAG+GGG - chr4_4:34214012-34214031 Msa0678450:intron 35.0%
! CAATGATTTGGCTACTTCAT+CGG - chr4_4:34214097-34214116 Msa0678450:intron 35.0%
AGTTGCACATCTATAAAGCA+CGG - chr4_4:34214222-34214241 Msa0678450:intron 35.0%
ACATCTATAAAGCACGGATA+CGG - chr4_4:34214228-34214247 Msa0678450:intron 35.0%
! GAATGAAAATGGTGTTAGTG+AGG - chr4_4:34214545-34214564 Msa0678450:intron 35.0%
CTTTATTCGATTCTTTGCCA+TGG + chr4_4:34214742-34214761 None:intergenic 35.0%
CATGGCAAAGAATCGAATAA+AGG - chr4_4:34214740-34214759 Msa0678450:intron 35.0%
! TGAAGGTATATGTTAGTGTG+AGG - chr4_4:34214842-34214861 Msa0678450:intron 35.0%
! GAAGGTATATGTTAGTGTGA+GGG - chr4_4:34214843-34214862 Msa0678450:intron 35.0%
! TTGGAGCTGTACATTTTCTT+TGG + chr4_4:34214897-34214916 None:intergenic 35.0%
! CGAACATCATTTTGTTGAAC+AGG + chr4_4:34215035-34215054 None:intergenic 35.0%
CAACAAAATGATGTTCGCTA+TGG - chr4_4:34215038-34215057 Msa0678450:intron 35.0%
AAACTAACTTGAACGTCAGA+TGG + chr4_4:34215114-34215133 None:intergenic 35.0%
AGCATTGTAATGTGCAATCA+TGG - chr4_4:34215280-34215299 Msa0678450:CDS 35.0%
ATTGTAATGTGCAATCATGG+AGG - chr4_4:34215283-34215302 Msa0678450:CDS 35.0%
AACAAGGCCAACTTAGTATT+GGG + chr4_4:34215397-34215416 None:intergenic 35.0%
AAACAAGGCCAACTTAGTAT+TGG + chr4_4:34215398-34215417 None:intergenic 35.0%
!! ACTAAGTTGGCCTTGTTTAT+TGG - chr4_4:34215400-34215419 Msa0678450:CDS 35.0%
!! CTAAGTTGGCCTTGTTTATT+GGG - chr4_4:34215401-34215420 Msa0678450:CDS 35.0%
CTGTTATGAGTATAAGCCTT+TGG - chr4_4:34215430-34215449 Msa0678450:CDS 35.0%
AAATACCAAATTTCCCCCAA+CGG - chr4_4:34215497-34215516 Msa0678450:intron 35.0%
AATGAAGGATTGGGTGAATT+CGG + chr4_4:34215644-34215663 None:intergenic 35.0%
TTTCGTGCAAATGAAGGATT+GGG + chr4_4:34215653-34215672 None:intergenic 35.0%
! TTTTCGTGCAAATGAAGGAT+TGG + chr4_4:34215654-34215673 None:intergenic 35.0%
! GATGATTTTCGTGCAAATGA+AGG + chr4_4:34215659-34215678 None:intergenic 35.0%
TGTGTCGCAACAAAAAAAAC+AGG - chr4_4:34215825-34215844 Msa0678450:intron 35.0%
CACACACAAATGTACAATCA+TGG - chr4_4:34215921-34215940 Msa0678450:intron 35.0%
AACACGCTCAACTTAGTATT+GGG + chr4_4:34216045-34216064 None:intergenic 35.0%
AAACACGCTCAACTTAGTAT+TGG + chr4_4:34216046-34216065 None:intergenic 35.0%
! ACTAAGTTGAGCGTGTTTAT+TGG - chr4_4:34216048-34216067 Msa0678450:intron 35.0%
! CTAAGTTGAGCGTGTTTATT+GGG - chr4_4:34216049-34216068 Msa0678450:intron 35.0%
TGTTGTGAGTATAAGCCTTT+GGG - chr4_4:34216079-34216098 Msa0678450:intron 35.0%
ATCATAAGAGCAATGACTTG+GGG + chr4_4:34216122-34216141 None:intergenic 35.0%
CATGATATCTATCCTCACAT+AGG + chr4_4:34216175-34216194 None:intergenic 35.0%
GGATAGATATCATGCTATGT+TGG - chr4_4:34216181-34216200 Msa0678450:CDS 35.0%
TAATTCAGGCTTGATCTTCA+AGG + chr4_4:34216507-34216526 None:intergenic 35.0%
! ATGACTCTGAAGATATCAGA+AGG - chr4_4:34216545-34216564 Msa0678450:CDS 35.0%
TGAAGATATCAGAAGGTCAA+TGG - chr4_4:34216552-34216571 Msa0678450:CDS 35.0%
! TTTCAGTGAAGGTACAAAGA+AGG - chr4_4:34216582-34216601 Msa0678450:CDS 35.0%
AGCTACAACTATGTCTCTAT+TGG - chr4_4:34216662-34216681 Msa0678450:CDS 35.0%
GAAGTGGAGAACCATTTCTA+TGG + chr4_4:34209890-34209909 None:intergenic 40.0%
TACCGCATAATCGTGTTTCA+AGG + chr4_4:34210000-34210019 None:intergenic 40.0%
TCGAAGGAGCCTAAATCTTA+AGG + chr4_4:34210332-34210351 None:intergenic 40.0%
TTTAGGCTCCTTCGAGAATA+TGG - chr4_4:34210337-34210356 Msa0678450:three_prime_UTR 40.0%
TGTACATATGTATGTGCACC+TGG + chr4_4:34210376-34210395 None:intergenic 40.0%
GAGAAGTTTAAGGACCACAA+TGG - chr4_4:34211088-34211107 Msa0678450:intron 40.0%
! GGACCACAATGGAGATTTTA+AGG - chr4_4:34211099-34211118 Msa0678450:intron 40.0%
AGGAATGTTAAGTCTCTACG+AGG - chr4_4:34211144-34211163 Msa0678450:intron 40.0%
AAAAAGGAAGGACGCAAACA+AGG - chr4_4:34211354-34211373 Msa0678450:three_prime_UTR 40.0%
AAGTCTAATGTGATGCTCCT+CGG - chr4_4:34211703-34211722 Msa0678450:three_prime_UTR 40.0%
TTGTGAATGGAGTCGTGATT+TGG - chr4_4:34211755-34211774 Msa0678450:CDS 40.0%
!!! CAGTGTTGTTGATTTTTCGC+TGG + chr4_4:34211907-34211926 None:intergenic 40.0%
ACTCCCGACACAAATCAAAA+AGG - chr4_4:34212109-34212128 Msa0678450:intron 40.0%
!!! GTGCCTTTTTGATTTGTGTC+GGG + chr4_4:34212115-34212134 None:intergenic 40.0%
!!! GGTGCCTTTTTGATTTGTGT+CGG + chr4_4:34212116-34212135 None:intergenic 40.0%
!! CCAAGTTTTTGGACAGGTTT+AGG + chr4_4:34212168-34212187 None:intergenic 40.0%
CCTAAACCTGTCCAAAAACT+TGG - chr4_4:34212165-34212184 Msa0678450:intron 40.0%
!! ATATTGGTGGGCCAAGTTTT+TGG + chr4_4:34212179-34212198 None:intergenic 40.0%
! CAAATTTGGCATCGGGATAT+TGG + chr4_4:34212195-34212214 None:intergenic 40.0%
CGTCTTACAAATTTGGCATC+GGG + chr4_4:34212202-34212221 None:intergenic 40.0%
CCGTCTTACAAATTTGGCAT+CGG + chr4_4:34212203-34212222 None:intergenic 40.0%
CCGATGCCAAATTTGTAAGA+CGG - chr4_4:34212200-34212219 Msa0678450:intron 40.0%
TTTGTAAGACGGAGAAAAGG+TGG - chr4_4:34212211-34212230 Msa0678450:intron 40.0%
TTCTCCTCTGCAAAGAAAGA+CGG + chr4_4:34212353-34212372 None:intergenic 40.0%
ATCTTCAATCATCCAGAGAC+TGG - chr4_4:34212375-34212394 Msa0678450:intron 40.0%
!! ACATAATGAAGGTGGTGGAA+AGG - chr4_4:34212730-34212749 Msa0678450:intron 40.0%
!! CATAATGAAGGTGGTGGAAA+GGG - chr4_4:34212731-34212750 Msa0678450:intron 40.0%
TTGCGGATATCACTAAACTG+AGG + chr4_4:34212841-34212860 None:intergenic 40.0%
TCAGTTTAGTGATATCCGCA+AGG - chr4_4:34212840-34212859 Msa0678450:intron 40.0%
CAGTTTAGTGATATCCGCAA+GGG - chr4_4:34212841-34212860 Msa0678450:intron 40.0%
TCTAGCCAAGACTTTAAACG+CGG - chr4_4:34213432-34213451 Msa0678450:CDS 40.0%
CATTCCTACAAGAAGCAAGA+TGG - chr4_4:34213889-34213908 Msa0678450:intron 40.0%
ATGACTACCTCAACAATGCA+TGG - chr4_4:34213940-34213959 Msa0678450:intron 40.0%
TGACTACCTCAACAATGCAT+GGG - chr4_4:34213941-34213960 Msa0678450:intron 40.0%
ATGGGTGAGTAAAACTACAC+CGG + chr4_4:34213976-34213995 None:intergenic 40.0%
ATGTATGGACGGTTAAGGTA+AGG + chr4_4:34214136-34214155 None:intergenic 40.0%
TATGCATGTATGGACGGTTA+AGG + chr4_4:34214141-34214160 None:intergenic 40.0%
AAATGTGCACCTATGAAGCA+CGG + chr4_4:34214403-34214422 None:intergenic 40.0%
GCTTCATAGGTGCACATTTA+AGG - chr4_4:34214404-34214423 Msa0678450:intron 40.0%
! TGAAAATGGTGTTAGTGAGG+AGG - chr4_4:34214548-34214567 Msa0678450:intron 40.0%
TGCAGTGAGAAATTCTAGCA+AGG + chr4_4:34214683-34214702 None:intergenic 40.0%
TACCAATATGGAGATGGTCA+TGG - chr4_4:34214705-34214724 Msa0678450:intron 40.0%
ATTCTTTGCCATGGTATCAG+GGG + chr4_4:34214733-34214752 None:intergenic 40.0%
GATTCTTTGCCATGGTATCA+GGG + chr4_4:34214734-34214753 None:intergenic 40.0%
GTTAGCTGTTTGTATGAGCA+TGG - chr4_4:34215064-34215083 Msa0678450:intron 40.0%
CTGTTTGTATGAGCATGGAA+CGG - chr4_4:34215069-34215088 Msa0678450:intron 40.0%
ATGTGTATGTCGTTAACGAC+AGG - chr4_4:34215213-34215232 Msa0678450:CDS 40.0%
GCTTATACTCATAACAGTCC+AGG + chr4_4:34215427-34215446 None:intergenic 40.0%
AACGGTAGTTAACTACCGTT+GGG + chr4_4:34215515-34215534 None:intergenic 40.0%
AGTTAACTACTGTTGCGATC+TGG - chr4_4:34215550-34215569 Msa0678450:intron 40.0%
GTTAACTACTGTTGCGATCT+GGG - chr4_4:34215551-34215570 Msa0678450:intron 40.0%
CTGTTGTGAGTATAAGCCTT+TGG - chr4_4:34216078-34216097 Msa0678450:intron 40.0%
CTATTATTTGGACTGCCCAA+AGG + chr4_4:34216097-34216116 None:intergenic 40.0%
! TCATAAGAGCAATGACTTGG+GGG + chr4_4:34216121-34216140 None:intergenic 40.0%
CAATAGTGATGTCCTATGTG+AGG - chr4_4:34216160-34216179 Msa0678450:intron 40.0%
!! ATGGATGTCACTTTCAGTGA+AGG - chr4_4:34216571-34216590 Msa0678450:CDS 40.0%
TAGCTTCGTACAATGCACAT+GGG + chr4_4:34216647-34216666 None:intergenic 40.0%
!! TTTCTAGGATGCTCGATACG+TGG - chr4_4:34210105-34210124 Msa0678450:three_prime_UTR 45.0%
AGATAGGAGAAGCCCTTGAT+AGG - chr4_4:34210245-34210264 Msa0678450:three_prime_UTR 45.0%
CTTTGGACTCTACGATGTAG+TGG + chr4_4:34211301-34211320 None:intergenic 45.0%
TCCAAAGTCTTGAAGCTCGA+TGG - chr4_4:34211314-34211333 Msa0678450:three_prime_UTR 45.0%
ACCATCGAGCTTCAAGACTT+TGG + chr4_4:34211318-34211337 None:intergenic 45.0%
!! GTTGGTTGGTAAAGGAAGCT+CGG - chr4_4:34211516-34211535 Msa0678450:three_prime_UTR 45.0%
AGTCTAATGTGATGCTCCTC+GGG - chr4_4:34211704-34211723 Msa0678450:three_prime_UTR 45.0%
!! TTGAACTCCGTTGGTGGTAA+TGG + chr4_4:34211938-34211957 None:intergenic 45.0%
! GCTTTATTGAACTCCGTTGG+TGG + chr4_4:34211944-34211963 None:intergenic 45.0%
! GCTGCTTTATTGAACTCCGT+TGG + chr4_4:34211947-34211966 None:intergenic 45.0%
ACTTATCGGATGTTGAGTGG+TGG + chr4_4:34212006-34212025 None:intergenic 45.0%
CCACTCAACATCCGATAAGT+CGG - chr4_4:34212006-34212025 Msa0678450:CDS 45.0%
ATTTGTGTCGGGAGTCTAGT+GGG + chr4_4:34212104-34212123 None:intergenic 45.0%
! TCTGGTGGTTCATGAGTTGA+GGG + chr4_4:34212138-34212157 None:intergenic 45.0%
! TTTGGCATCGGGATATTGGT+GGG + chr4_4:34212191-34212210 None:intergenic 45.0%
! ATTTGGCATCGGGATATTGG+TGG + chr4_4:34212192-34212211 None:intergenic 45.0%
!! GCTTGTGGTGGTTGATTTTG+TGG + chr4_4:34212286-34212305 None:intergenic 45.0%
ACCTTATCAACACAACCCTC+TGG - chr4_4:34212318-34212337 Msa0678450:intron 45.0%
! TCCAGAGGGTTGTGTTGATA+AGG + chr4_4:34212322-34212341 None:intergenic 45.0%
TGCAAAGAAAGACGGTACAG+TGG + chr4_4:34212345-34212364 None:intergenic 45.0%
TGTACCGTCTTTCTTTGCAG+AGG - chr4_4:34212346-34212365 Msa0678450:intron 45.0%
ACGTCCTTTAGGTCTGCAAA+GGG + chr4_4:34212420-34212439 None:intergenic 45.0%
ACGACCAAAGCTTAACCTTG+GGG + chr4_4:34212767-34212786 None:intergenic 45.0%
CACGACCAAAGCTTAACCTT+GGG + chr4_4:34212768-34212787 None:intergenic 45.0%
TCACGACCAAAGCTTAACCT+TGG + chr4_4:34212769-34212788 None:intergenic 45.0%
! GGTTAAGCTTTGGTCGTGAT+AGG - chr4_4:34212770-34212789 Msa0678450:intron 45.0%
CTTTGGTCGTGATAGGCTAA+TGG - chr4_4:34212777-34212796 Msa0678450:intron 45.0%
! GAATGTTTCTTTTGGGCTGC+TGG - chr4_4:34212799-34212818 Msa0678450:intron 45.0%
! TTTCTTTTGGGCTGCTGGAA+TGG - chr4_4:34212804-34212823 Msa0678450:intron 45.0%
TCTTCCCTACCTCGTCAAAT+CGG - chr4_4:34213190-34213209 Msa0678450:intron 45.0%
!! CATACCGATTTGACGAGGTA+GGG + chr4_4:34213197-34213216 None:intergenic 45.0%
!! TCATACCGATTTGACGAGGT+AGG + chr4_4:34213198-34213217 None:intergenic 45.0%
!! TTGGTCATACCGATTTGACG+AGG + chr4_4:34213202-34213221 None:intergenic 45.0%
GACACCATCTTGCTTCTTGT+AGG + chr4_4:34213896-34213915 None:intergenic 45.0%
TACGGAGACTGGACAAGAAA+CGG - chr4_4:34214246-34214265 Msa0678450:intron 45.0%
TGTCTGATACCTGTTGTGTC+CGG + chr4_4:34214353-34214372 None:intergenic 45.0%
ACACAACAGGTATCAGACAC+CGG - chr4_4:34214354-34214373 Msa0678450:intron 45.0%
TCCTCGGATTAAACGTGTTC+CGG + chr4_4:34214376-34214395 None:intergenic 45.0%
TCTCACTGCACGTACCAATA+TGG - chr4_4:34214693-34214712 Msa0678450:intron 45.0%
TGCACGTACCAATATGGAGA+TGG - chr4_4:34214699-34214718 Msa0678450:intron 45.0%
CTCCATGACCATCTCCATAT+TGG + chr4_4:34214710-34214729 None:intergenic 45.0%
CGATTCTTTGCCATGGTATC+AGG + chr4_4:34214735-34214754 None:intergenic 45.0%
TTGAACGTCAGATGGTATGC+AGG + chr4_4:34215106-34215125 None:intergenic 45.0%
GGACTTTACAATGTCCCACA+AGG + chr4_4:34215176-34215195 None:intergenic 45.0%
AACTACCGTTGGGGGAAATT+TGG + chr4_4:34215505-34215524 None:intergenic 45.0%
ACGGTAGTTAACTACCGTTG+GGG + chr4_4:34215516-34215535 None:intergenic 45.0%
CAACGGTAGTTAACTACCGT+TGG + chr4_4:34215514-34215533 None:intergenic 45.0%
CAACGGTAGTTAACTACCGT+TGG - chr4_4:34215514-34215533 Msa0678450:intron 45.0%
CAACAGTAGTTAACTGCTGC+TGG + chr4_4:34215545-34215564 None:intergenic 45.0%
AAGGATTGGGTGAATTCGGT+AGG + chr4_4:34215640-34215659 None:intergenic 45.0%
GCTTATACTCACAACAGTCC+AGG + chr4_4:34216075-34216094 None:intergenic 45.0%
! TGACTTGGGGGGCTATTATT+TGG + chr4_4:34216109-34216128 None:intergenic 45.0%
! CATAAGAGCAATGACTTGGG+GGG + chr4_4:34216120-34216139 None:intergenic 45.0%
TCTGAAGATCATCCAGACTC+TGG - chr4_4:34216416-34216435 Msa0678450:intron 45.0%
AAGTCAGACTTCAGACTCTG+AGG - chr4_4:34216442-34216461 Msa0678450:intron 45.0%
AGTCAGACTTCAGACTCTGA+GGG - chr4_4:34216443-34216462 Msa0678450:intron 45.0%
TCAGGATCTGGACAAGCTAA+AGG - chr4_4:34216466-34216485 Msa0678450:intron 45.0%
CTGGACAAGCTAAAGGACAA+AGG - chr4_4:34216473-34216492 Msa0678450:intron 45.0%
AATGGAGTAGTGGTCGTACA+AGG + chr4_4:34216612-34216631 None:intergenic 45.0%
!! TGTTGCAGGTAATGGAGTAG+TGG + chr4_4:34216622-34216641 None:intergenic 45.0%
CATGGGAATGTTGCAGGTAA+TGG + chr4_4:34216630-34216649 None:intergenic 45.0%
AATGCACATGGGAATGTTGC+AGG + chr4_4:34216636-34216655 None:intergenic 45.0%
GTAGCTTCGTACAATGCACA+TGG + chr4_4:34216648-34216667 None:intergenic 45.0%
!!! TTATAAATTTGTAATTTTTT+AGG + chr4_4:34210516-34210535 None:intergenic 5.0%
!! AATATATTATATATAAATAG+GGG - chr4_4:34211830-34211849 Msa0678450:CDS 5.0%
!!! AAATATAATTTTATAAAACT+TGG - chr4_4:34212654-34212673 Msa0678450:intron 5.0%
!!! AATATAATTTTATAAAACTT+GGG - chr4_4:34212655-34212674 Msa0678450:intron 5.0%
!!! GTAAATTATTATTAATTTTT+AGG + chr4_4:34214994-34215013 None:intergenic 5.0%
AGGATGCTCGATACGTGGAT+AGG - chr4_4:34210110-34210129 Msa0678450:three_prime_UTR 50.0%
CTCGATACGTGGATAGGAGT+AGG - chr4_4:34210116-34210135 Msa0678450:three_prime_UTR 50.0%
GATACGTGGATAGGAGTAGG+AGG - chr4_4:34210119-34210138 Msa0678450:three_prime_UTR 50.0%
TAGGAGTAGGAGGATGCAAG+AGG - chr4_4:34210129-34210148 Msa0678450:three_prime_UTR 50.0%
! GTGGATGCTGGTGAAAGCAT+TGG + chr4_4:34211212-34211231 None:intergenic 50.0%
!! AAGGTCTTTGAGGTGGATGC+TGG + chr4_4:34211224-34211243 None:intergenic 50.0%
AGCATCCACCTCAAAGACCT+TGG - chr4_4:34211223-34211242 Msa0678450:intron 50.0%
CACCTCAAAGACCTTGGTGA+GGG - chr4_4:34211229-34211248 Msa0678450:intron 50.0%
TACCCTCACCAAGGTCTTTG+AGG + chr4_4:34211234-34211253 None:intergenic 50.0%
TACTGCTTCTACCCTCACCA+AGG + chr4_4:34211243-34211262 None:intergenic 50.0%
CCGACTTATCGGATGTTGAG+TGG + chr4_4:34212009-34212028 None:intergenic 50.0%
CTCAACATCCGATAAGTCGG+AGG - chr4_4:34212009-34212028 Msa0678450:CDS 50.0%
TGGTGTCTCCTCCGACTTAT+CGG + chr4_4:34212020-34212039 None:intergenic 50.0%
GATTTGTGTCGGGAGTCTAG+TGG + chr4_4:34212105-34212124 None:intergenic 50.0%
! CTGGTGGTTCATGAGTTGAG+GGG + chr4_4:34212137-34212156 None:intergenic 50.0%
CTCTGGTGGTTCATGAGTTG+AGG + chr4_4:34212139-34212158 None:intergenic 50.0%
ACAGGTTTAGGTGTCTGCTC+TGG + chr4_4:34212156-34212175 None:intergenic 50.0%
ACGACCCTTTGCAGACCTAA+AGG - chr4_4:34212413-34212432 Msa0678450:intron 50.0%
GACGTCCTTTAGGTCTGCAA+AGG + chr4_4:34212421-34212440 None:intergenic 50.0%
!!! CATCGTCGTCGGTTTTTGGT+CGG + chr4_4:34212445-34212464 None:intergenic 50.0%
GACCAAAAACCGACGACGAT+GGG - chr4_4:34212444-34212463 Msa0678450:CDS 50.0%
ACCAAAAACCGACGACGATG+GGG - chr4_4:34212445-34212464 Msa0678450:CDS 50.0%
!! ATGAAGGTGGTGGAAAGGGA+TGG - chr4_4:34212735-34212754 Msa0678450:intron 50.0%
!! TGAAGGTGGTGGAAAGGGAT+GGG - chr4_4:34212736-34212755 Msa0678450:intron 50.0%
CTAGCCCCAAGGTTAAGCTT+TGG - chr4_4:34212760-34212779 Msa0678450:intron 50.0%
CAGACACCCATGCATTGTTG+AGG + chr4_4:34213950-34213969 None:intergenic 50.0%
AATGCATGGGTGTCTGTGTC+CGG - chr4_4:34213954-34213973 Msa0678450:intron 50.0%
AAAGGAGGGGCTTGAGTACT+TGG - chr4_4:34214025-34214044 Msa0678450:intron 50.0%
TAAAGCACGGATACGGAGAC+TGG - chr4_4:34214235-34214254 Msa0678450:intron 50.0%
!! TGTTGGTGTCGTATCGATGC+CGG - chr4_4:34214331-34214350 Msa0678450:intron 50.0%
ACCGGAACACGTTTAATCCG+AGG - chr4_4:34214372-34214391 Msa0678450:intron 50.0%
TATGAAGCACGGACACTCCT+CGG + chr4_4:34214392-34214411 None:intergenic 50.0%
TTGCAGGCGGAGTTAGAAAG+AGG - chr4_4:34214492-34214511 Msa0678450:intron 50.0%
GCGGAGTTAGAAAGAGGTGA+AGG - chr4_4:34214498-34214517 Msa0678450:intron 50.0%
TTGTATGAGCATGGAACGGC+AGG - chr4_4:34215073-34215092 Msa0678450:intron 50.0%
TGTATGAGCATGGAACGGCA+GGG - chr4_4:34215074-34215093 Msa0678450:intron 50.0%
AACGACAGGAAGTCACTGCT+CGG - chr4_4:34215227-34215246 Msa0678450:CDS 50.0%
AAGTCACTGCTCGGCAGTTA+CGG - chr4_4:34215236-34215255 Msa0678450:CDS 50.0%
!! TTGGCCTTGTTTATTGGGCC+TGG - chr4_4:34215406-34215425 Msa0678450:CDS 50.0%
CAGTCCAGGCCCAATAAACA+AGG + chr4_4:34215413-34215432 None:intergenic 50.0%
CGGTAGTTAACTACCGTTGG+GGG + chr4_4:34215517-34215536 None:intergenic 50.0%
ACTGCTGCTGGATATGCCAA+CGG + chr4_4:34215533-34215552 None:intergenic 50.0%
TGTGTGTGTGTGTGTGTGTG+GGG + chr4_4:34215903-34215922 None:intergenic 50.0%
GTGTGTGTGTGTGTGTGTGT+GGG + chr4_4:34215904-34215923 None:intergenic 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG + chr4_4:34215903-34215922 None:intergenic 50.0%
TTGAGCGTGTTTATTGGGCC+TGG - chr4_4:34216054-34216073 Msa0678450:intron 50.0%
GTCTGACTTCTTCCAGAGTC+TGG + chr4_4:34216431-34216450 None:intergenic 50.0%
! CCTCACCAAGGTCTTTGAGG+TGG + chr4_4:34211231-34211250 None:intergenic 55.0%
CCACCTCAAAGACCTTGGTG+AGG - chr4_4:34211228-34211247 Msa0678450:intron 55.0%
GGTTTAGGTGTCTGCTCTGG+TGG + chr4_4:34212153-34212172 None:intergenic 55.0%
!! GGTGGGCCAAGTTTTTGGAC+AGG + chr4_4:34212174-34212193 None:intergenic 55.0%
GTTAGTGGCTGTGCTTGTGG+TGG + chr4_4:34212298-34212317 None:intergenic 55.0%
GGTGTTAGTGGCTGTGCTTG+TGG + chr4_4:34212301-34212320 None:intergenic 55.0%
AGACGGTACAGTGGTCCAGA+GGG + chr4_4:34212336-34212355 None:intergenic 55.0%
AAGACGGTACAGTGGTCCAG+AGG + chr4_4:34212337-34212356 None:intergenic 55.0%
!! GTTGTGGTGGATCCAGTCTC+TGG + chr4_4:34212390-34212409 None:intergenic 55.0%
AAAGGGTCGTGCAGTTGTGG+TGG + chr4_4:34212403-34212422 None:intergenic 55.0%
TGCAAAGGGTCGTGCAGTTG+TGG + chr4_4:34212406-34212425 None:intergenic 55.0%
TTTGGTCGGCGACGTCCTTT+AGG + chr4_4:34212431-34212450 None:intergenic 55.0%
CGACCAAAAACCGACGACGA+TGG - chr4_4:34212443-34212462 Msa0678450:CDS 55.0%
!!! TCCCCATCGTCGTCGGTTTT+TGG + chr4_4:34212449-34212468 None:intergenic 55.0%
AAAAACCGACGACGATGGGG+AGG - chr4_4:34212448-34212467 Msa0678450:CDS 55.0%
CAAATCCTCCCCATCGTCGT+CGG + chr4_4:34212456-34212475 None:intergenic 55.0%
! GTATCGATGCCGGACACAAC+AGG - chr4_4:34214341-34214360 Msa0678450:intron 55.0%
!! GAGGAGTGTCCGTGCTTCAT+AGG - chr4_4:34214391-34214410 Msa0678450:intron 55.0%
TCATGGAGCCCCTGATACCA+TGG - chr4_4:34214722-34214741 Msa0678450:intron 55.0%
GTATGAGCATGGAACGGCAG+GGG - chr4_4:34215075-34215094 Msa0678450:intron 55.0%
! TTTTGAACCGGTGCCTCGTG+TGG - chr4_4:34215321-34215340 Msa0678450:CDS 55.0%
TGTGTGTGTGTGTGTGTGGG+GGG + chr4_4:34215901-34215920 None:intergenic 55.0%
GTGTGTGTGTGTGTGTGTGG+GGG + chr4_4:34215902-34215921 None:intergenic 55.0%
! GACTTCAGACTCTGAGGGTC+AGG - chr4_4:34216448-34216467 Msa0678450:intron 55.0%
! AGACTCTGAGGGTCAGGATC+TGG - chr4_4:34216454-34216473 Msa0678450:intron 55.0%
! GTAGGACATGATGGGACCCG+AGG + chr4_4:34211723-34211742 None:intergenic 60.0%
!! AAGGGATGGGACTAGCCCCA+AGG - chr4_4:34212749-34212768 Msa0678450:intron 60.0%
CTGCTCGGCAGTTACGGTTG+CGG - chr4_4:34215242-34215261 Msa0678450:CDS 60.0%
TGCTCGGCAGTTACGGTTGC+GGG - chr4_4:34215243-34215262 Msa0678450:CDS 60.0%
TTCACACTCCCTCCCCACGA+GGG + chr4_4:34215358-34215377 None:intergenic 60.0%
TGTGTGTGTGTGTGTGGGGG+GGG + chr4_4:34215899-34215918 None:intergenic 60.0%
GTGTGTGTGTGTGTGTGGGG+GGG + chr4_4:34215900-34215919 None:intergenic 60.0%
CTCGTAGAAACACGGGGCAC+CGG + chr4_4:34215970-34215989 None:intergenic 60.0%
! GGGGTGCTCGTAGAAACACG+GGG + chr4_4:34215976-34215995 None:intergenic 60.0%
!! GGGGGTGCTCGTAGAAACAC+GGG + chr4_4:34215977-34215996 None:intergenic 60.0%
!! GGGGGGTGCTCGTAGAAACA+CGG + chr4_4:34215978-34215997 None:intergenic 60.0%
CTCGTAGCCACACGAGGCAC+CGG + chr4_4:34215331-34215350 None:intergenic 65.0%
TCACACTCCCTCCCCACGAG+GGG + chr4_4:34215357-34215376 None:intergenic 65.0%
CTTCACACTCCCTCCCCACG+AGG + chr4_4:34215359-34215378 None:intergenic 65.0%
TGTGTGTGTGTGTGGGGGGG+GGG + chr4_4:34215897-34215916 None:intergenic 65.0%
GTGTGTGTGTGTGTGGGGGG+GGG + chr4_4:34215898-34215917 None:intergenic 65.0%
TTCACACTCCCTCCCCGCGA+GGG + chr4_4:34216006-34216025 None:intergenic 65.0%
! GGGGTGCTCGTAGCCACACG+AGG + chr4_4:34215337-34215356 None:intergenic 70.0%
TGGCTACGAGCACCCCCTCG+TGG - chr4_4:34215341-34215360 Msa0678450:CDS 70.0%
GGCTACGAGCACCCCCTCGT+GGG - chr4_4:34215342-34215361 Msa0678450:CDS 70.0%
GCTACGAGCACCCCCTCGTG+GGG - chr4_4:34215343-34215362 Msa0678450:CDS 70.0%
CACACTCCCTCCCCACGAGG+GGG + chr4_4:34215356-34215375 None:intergenic 70.0%
TGTGTGTGTGTGGGGGGGGG+GGG + chr4_4:34215895-34215914 None:intergenic 70.0%
GTGTGTGTGTGTGGGGGGGG+GGG + chr4_4:34215896-34215915 None:intergenic 70.0%
TCACACTCCCTCCCCGCGAG+GGG + chr4_4:34216005-34216024 None:intergenic 70.0%
CTTCACACTCCCTCCCCGCG+AGG + chr4_4:34216007-34216026 None:intergenic 70.0%
ACGAGCACCCCCTCGTGGGG+AGG - chr4_4:34215346-34215365 Msa0678450:CDS 75.0%
CGAGCACCCCCTCGTGGGGA+GGG - chr4_4:34215347-34215366 Msa0678450:CDS 75.0%
! GGGGTAGGGGTGCGGGTCTC+TGG + chr4_4:34215864-34215883 None:intergenic 75.0%
TGTGTGTGTGGGGGGGGGGG+GGG + chr4_4:34215893-34215912 None:intergenic 75.0%
GTGTGTGTGTGGGGGGGGGG+GGG + chr4_4:34215894-34215913 None:intergenic 75.0%
ACACTCCCTCCCCGCGAGGG+GGG + chr4_4:34216003-34216022 None:intergenic 75.0%
CACACTCCCTCCCCGCGAGG+GGG + chr4_4:34216004-34216023 None:intergenic 75.0%
! TGTGTGTGGGGGGGGGGGGG+GGG + chr4_4:34215891-34215910 None:intergenic 80.0%
! GTGTGTGTGGGGGGGGGGGG+GGG + chr4_4:34215892-34215911 None:intergenic 80.0%
! ACTCCCTCCCCGCGAGGGGG+GGG + chr4_4:34216001-34216020 None:intergenic 80.0%
! CACTCCCTCCCCGCGAGGGG+GGG + chr4_4:34216002-34216021 None:intergenic 80.0%
!! GGGGGGGGGGGTAGGGGTGC+GGG + chr4_4:34215871-34215890 None:intergenic 85.0%
! GGGGGGGGGGGGTAGGGGTG+CGG + chr4_4:34215872-34215891 None:intergenic 85.0%
! TGTGTGGGGGGGGGGGGGGG+GGG + chr4_4:34215889-34215908 None:intergenic 85.0%
! GTGTGTGGGGGGGGGGGGGG+GGG + chr4_4:34215890-34215909 None:intergenic 85.0%
! TCCCTCCCCGCGAGGGGGGG+GGG + chr4_4:34215999-34216018 None:intergenic 85.0%
! CTCCCTCCCCGCGAGGGGGG+GGG + chr4_4:34216000-34216019 None:intergenic 85.0%
! GGGGGGGGGGGGGGGGGTAG+GGG + chr4_4:34215877-34215896 None:intergenic 90.0%
! GGGGGGGGGGGGGGGGGGTA+GGG + chr4_4:34215878-34215897 None:intergenic 90.0%
! TGTGGGGGGGGGGGGGGGGG+GGG + chr4_4:34215887-34215906 None:intergenic 90.0%
! GTGTGGGGGGGGGGGGGGGG+GGG + chr4_4:34215888-34215907 None:intergenic 90.0%
! GCACCCCCCCCCCCCCCTCG+CGG - chr4_4:34215989-34216008 Msa0678450:intron 90.0%
! CACCCCCCCCCCCCCCTCGC+GGG - chr4_4:34215990-34216009 Msa0678450:intron 90.0%
! ACCCCCCCCCCCCCCTCGCG+GGG - chr4_4:34215991-34216010 Msa0678450:intron 90.0%
! TCCCCGCGAGGGGGGGGGGG+GGG + chr4_4:34215995-34216014 None:intergenic 90.0%
! CTCCCCGCGAGGGGGGGGGG+GGG + chr4_4:34215996-34216015 None:intergenic 90.0%
! CCTCCCCGCGAGGGGGGGGG+GGG + chr4_4:34215997-34216016 None:intergenic 90.0%
! CCCTCCCCGCGAGGGGGGGG+GGG + chr4_4:34215998-34216017 None:intergenic 90.0%
! CCCCCCCCCCCTCGCGGGGA+GGG - chr4_4:34215995-34216014 Msa0678450:intron 90.0%
! GGGGGGGGGGGGGGGGGGGT+AGG + chr4_4:34215879-34215898 None:intergenic 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr4_4:34215885-34215904 None:intergenic 95.0%
! GTGGGGGGGGGGGGGGGGGG+GGG + chr4_4:34215886-34215905 None:intergenic 95.0%
! CCCCCCCCCCCCTCGCGGGG+AGG - chr4_4:34215994-34216013 Msa0678450:intron 95.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 34209760 34216782 34209760 ID=Msa0678450;Name=Msa0678450
chr4_4 mRNA 34209760 34216782 34209760 ID=Msa0678450-mRNA-1;Parent=Msa0678450;Name=Msa0678450-mRNA-1;_AED=0.09;_eAED=0.09;_QI=50|1|1|1|0.85|0.75|8|1355|581
chr4_4 exon 34209760 34210598 34209760 ID=Msa0678450-mRNA-1:exon:8251;Parent=Msa0678450-mRNA-1
chr4_4 exon 34211238 34212044 34211238 ID=Msa0678450-mRNA-1:exon:8250;Parent=Msa0678450-mRNA-1
chr4_4 exon 34212424 34212672 34212424 ID=Msa0678450-mRNA-1:exon:8249;Parent=Msa0678450-mRNA-1
chr4_4 exon 34213331 34213469 34213331 ID=Msa0678450-mRNA-1:exon:8248;Parent=Msa0678450-mRNA-1
chr4_4 exon 34213580 34213801 34213580 ID=Msa0678450-mRNA-1:exon:8247;Parent=Msa0678450-mRNA-1
chr4_4 exon 34215090 34215462 34215090 ID=Msa0678450-mRNA-1:exon:8246;Parent=Msa0678450-mRNA-1
chr4_4 exon 34216166 34216430 34216166 ID=Msa0678450-mRNA-1:exon:8245;Parent=Msa0678450-mRNA-1
chr4_4 exon 34216526 34216782 34216526 ID=Msa0678450-mRNA-1:exon:8244;Parent=Msa0678450-mRNA-1
chr4_4 five_prime_UTR 34216733 34216782 34216733 ID=Msa0678450-mRNA-1:five_prime_utr;Parent=Msa0678450-mRNA-1
chr4_4 CDS 34216526 34216732 34216526 ID=Msa0678450-mRNA-1:cds;Parent=Msa0678450-mRNA-1
chr4_4 CDS 34216166 34216430 34216166 ID=Msa0678450-mRNA-1:cds;Parent=Msa0678450-mRNA-1
chr4_4 CDS 34215090 34215462 34215090 ID=Msa0678450-mRNA-1:cds;Parent=Msa0678450-mRNA-1
chr4_4 CDS 34213580 34213801 34213580 ID=Msa0678450-mRNA-1:cds;Parent=Msa0678450-mRNA-1
chr4_4 CDS 34213331 34213469 34213331 ID=Msa0678450-mRNA-1:cds;Parent=Msa0678450-mRNA-1
chr4_4 CDS 34212424 34212672 34212424 ID=Msa0678450-mRNA-1:cds;Parent=Msa0678450-mRNA-1
chr4_4 CDS 34211754 34212044 34211754 ID=Msa0678450-mRNA-1:cds;Parent=Msa0678450-mRNA-1
chr4_4 three_prime_UTR 34211238 34211753 34211238 ID=Msa0678450-mRNA-1:three_prime_utr;Parent=Msa0678450-mRNA-1
chr4_4 three_prime_UTR 34209760 34210598 34209760 ID=Msa0678450-mRNA-1:three_prime_utr;Parent=Msa0678450-mRNA-1
Gene Sequence

>Msa0678450

ATGTTGTTGAACTCTTCCTTTAACTCACTTCCTAGTTTCTTCAAATCTCAAGAACTAGGAAGAACTAATAATCTCAGCCATAGAAATGGTTCTCCACTTCTATGTTACGCTACTAATACAAATGTTTCTCAAAAAAGAAAATCAGCCAATTACAAACCCAATATTTGGAATTACGATATCTTACAATCCTTGAAACACGATTATGCGGATGCTCGATACGTGGATAGGAGTAGGAGGATGCAAGAGGAAGTAAGAAGAATGATTAAGGACGAAAATGTAAAGATATTAGAGTTAATCGATACTGTGAAACACTTAGGTCTCAGTTATCAATTCGAAAAGGAGATAGGAGAAGCCCTTGATAGGTTTTTATCTTTTGAAAAATGCAGTGGTTCAAACAATATTGGCAGAAGTCTTCATGAAACTGCCTTAAGATTTAGGCTCCTTCGAGAATATGGTTATGATGTTTCACCAGATATTTTTGAGAAGTTTAAGGACCACAATGGAGATTTTAAGGCATGTCTTGTCCAAGATATCAAAGGAATGTTAAGTCTCTACGAGGCATCATTTCTATCTTATGAAGGAGAACAAATTTTGGATGAAGCCAATGCTTTCACCAGCATCCACCTCAAAGACCTTGGTGAGGGTAGAAGCAGTATCCTCTTTGAACAAGTGAATCATTCATTGGAGCTTCCACTACATCGTAGAGTCCAAAGTCTTGAAGCTCGATGGTATATTGATTCATATGAAAAAAGGAAGGACGCAAACAAGGTCTTGCTTGAAGCAGCCAAACTGAATTTCAACATTGTGCAATCAACTTTACAAGAGGATCTTAAAGAAATGTCAAGGTGGTGGAAAGGGATGGGACTAGCCCCAAGGTTAAGCTTTGGTCGTGATAGGCTAATGGAATGTTTCTTTTGGGCTGCTGGAATGGCACCATTTGAACCTCAGTTTAGTGATATCCGCAAGGGTTTAACAAAAGTGTCCTCTCTAATTACTTTAATTGATGACATTTATGATGTTTATGGCACCTTGGATGAATTAGAGCTTTTTACAACTGCGGTAGAAAGTTGGGATATTAATGCAATTCAAATTCTTCCGGAGTATATGAAGATATTCTTCTTGGCACTTTACAACACTGTCAATGATTTCACGTATGACACACTTAAAGAAACAGGACATGACATTCTTCCCTACCTCGTCAAATCGTGGTCTGATTTGTTGAAAGCATTCCTACAAGAAGCAAGATGGTGTCACAACAAACACATGCCAAAATTTGATGACTACCTCAACAATGCATGGGTGTCTGTGTCCGGTGTAGTTTTACTCACCCATTCCTATTTTTTGCTAAATCGTAACATAACAAAGGAGGGGCTTGAGTACTTGGAAAATTGTCGTATATTGTTGCAGAGACCGTCCATAATTTTTCGACTTTGCAATGATTTGGCTACTTCATCGGCGGAGTTAGAAAGAGGTGAAGGAGCTAATTCAATTATATGCTACATGAATGAAAATGGTGTTAGTGAGGAGGTTGCTTACAAACACATCCAAAAATTGCTTAATGAAAATTGGAAGAAGATGAACAAAGATCGAGTTATCAATTCACCTTCCTCAAAATATTTTTCAGAGACAATAATCAACCTTGCTAGAATTTCTCACTGCACGTACCAATATGGAGATGGTCATGGAGCCCCTGATACCATGGCAAAGAATCGAATAAAGGCATTAATACTTGAACCAATTAATTAA
Protein sequence

>Msa0678450

MLLNSSFNSLPSFFKSQELGRTNNLSHRNGSPLLCYATNTNVSQKRKSANYKPNIWNYDILQSLKHDYADARYVDRSRRMQEEVRRMIKDENVKILELIDTVKHLGLSYQFEKEIGEALDRFLSFEKCSGSNNIGRSLHETALRFRLLREYGYDVSPDIFEKFKDHNGDFKACLVQDIKGMLSLYEASFLSYEGEQILDEANAFTSIHLKDLGEGRSSILFEQVNHSLELPLHRRVQSLEARWYIDSYEKRKDANKVLLEAAKLNFNIVQSTLQEDLKEMSRWWKGMGLAPRLSFGRDRLMECFFWAAGMAPFEPQFSDIRKGLTKVSSLITLIDDIYDVYGTLDELELFTTAVESWDINAIQILPEYMKIFFLALYNTVNDFTYDTLKETGHDILPYLVKSWSDLLKAFLQEARWCHNKHMPKFDDYLNNAWVSVSGVVLLTHSYFLLNRNITKEGLEYLENCRILLQRPSIIFRLCNDLATSSAELERGEGANSIICYMNENGVSEEVAYKHIQKLLNENWKKMNKDRVINSPSSKYFSETIINLARISHCTYQYGDGHGAPDTMAKNRIKALILEPIN*