AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0690580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690580 MtrunA17_Chr4g0039301 93.458 535 23 3 1 524 1 534 0.0 1003
Msa0690580 MtrunA17_Chr7g0260671 50.520 481 218 11 37 507 25 495 2.13e-168 486
Msa0690580 MtrunA17_Chr7g0260681 51.832 382 162 10 61 433 52 420 4.54e-136 400
Msa0690580 MtrunA17_Chr2g0283561 43.659 410 194 8 89 485 38 423 4.79e-107 326
Msa0690580 MtrunA17_Chr4g0046011 40.618 421 211 9 89 500 3 393 4.35e-99 305
Msa0690580 MtrunA17_Chr4g0046001 39.192 421 217 9 89 500 12 402 1.90e-96 298
Msa0690580 MtrunA17_Chr7g0214711 45.143 350 161 10 90 431 105 431 9.71e-94 294
Msa0690580 MtrunA17_Chr4g0041311 36.111 432 215 9 92 490 30 433 2.41e-86 273
Msa0690580 MtrunA17_Chr5g0399641 38.560 389 203 7 80 450 125 495 3.36e-84 271
Msa0690580 MtrunA17_Chr7g0250561 38.404 401 197 8 86 451 65 450 2.97e-81 260
Msa0690580 MtrunA17_Chr7g0250611 39.678 373 184 9 89 447 74 419 1.90e-80 257
Msa0690580 MtrunA17_Chr4g0055691 40.420 381 198 8 80 450 119 480 2.14e-78 255
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690580 AT1G51440.1 70.370 432 115 5 88 508 85 514 0.0 648
Msa0690580 AT1G06800.1 51.081 509 226 10 12 504 3 504 0.0 519
Msa0690580 AT2G30550.2 56.561 442 177 7 73 505 86 521 6.01e-179 514
Msa0690580 AT1G06800.2 50.343 437 196 8 12 433 3 433 1.07e-150 439
Msa0690580 AT2G30550.1 57.297 370 144 6 73 434 86 449 1.02e-149 437
Msa0690580 AT1G30370.1 44.258 418 205 8 85 490 109 510 8.33e-122 368
Msa0690580 AT1G05800.1 47.309 353 158 9 88 432 78 410 7.54e-98 304
Msa0690580 AT2G31690.1 45.763 354 165 11 88 432 86 421 1.08e-94 296
Msa0690580 AT1G06250.1 39.753 405 208 7 94 485 9 390 3.29e-93 291
Msa0690580 AT4G18550.1 40.394 406 204 10 94 485 23 404 2.69e-92 288
Msa0690580 AT4G18550.2 40.394 406 204 10 94 485 40 421 5.64e-92 288
Msa0690580 AT2G42690.1 36.659 431 216 9 94 494 8 411 2.59e-86 273
Msa0690580 AT2G44810.2 40.260 385 180 11 88 447 84 443 4.53e-84 268
Msa0690580 AT2G44810.1 40.584 377 174 11 96 447 2 353 2.78e-83 263
Msa0690580 AT4G16820.1 40.568 387 184 10 82 449 119 478 1.78e-79 258
Msa0690580 AT4G18550.3 42.105 266 139 7 94 348 40 301 4.22e-63 209
Msa0690580 AT1G06250.2 40.134 299 148 5 195 485 1 276 1.03e-62 207
Msa0690580 AT5G18630.3 30.818 159 88 5 215 371 100 238 5.11e-11 63.9
Msa0690580 AT5G18630.1 30.818 159 88 5 215 371 101 239 6.18e-11 64.7
Msa0690580 AT5G18630.2 30.818 159 88 5 215 371 100 238 6.73e-11 64.3
Msa0690580 AT5G18640.5 30.818 159 88 5 215 371 100 238 6.98e-11 63.5

Find 138 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGGAACTGAAATTAAAT+TGG 0.207992 4_4:-58447597 Msa0690580:CDS
AATTTAATATGGTTTCAAAA+AGG 0.225064 4_4:-58447469 Msa0690580:CDS
TTAGATTTCTTGAAGAATTT+AGG 0.245553 4_4:+58449937 None:intergenic
TTAATAGAGTAATGGTAATA+AGG 0.248705 4_4:+58450601 None:intergenic
TGGTGGGAATGGGAAGGATA+TGG 0.251258 4_4:+58450405 None:intergenic
TTTGAAGGAAAATGGTGATT+TGG 0.252255 4_4:-58447555 Msa0690580:CDS
ATTGTTGGATTTGTGGTTGA+TGG 0.253342 4_4:+58450368 None:intergenic
CCTGTTTCTACTTTGATTGA+TGG 0.275271 4_4:+58448055 None:intergenic
TTGAAGGAAAATGGTGATTT+GGG 0.292625 4_4:-58447554 Msa0690580:CDS
GCTTACGACATAGCCGAATT+AGG 0.294321 4_4:-58447863 Msa0690580:CDS
AAATCCAAGGCGAGAACAAC+TGG 0.302827 4_4:-58450176 Msa0690580:CDS
AATAATATAGGCGAATTATT+AGG 0.307627 4_4:+58450324 None:intergenic
AGTGCAGGATTGTTCTTTCT+TGG 0.310372 4_4:+58448015 None:intergenic
TGGAGACAAGATGAGAATAA+AGG 0.322904 4_4:-58447383 Msa0690580:CDS
GATTAGAGATATATAATATA+AGG 0.351563 4_4:+58450559 None:intergenic
TGCATAGAGGTAGCGGCTTA+TGG 0.364333 4_4:+58449978 None:intergenic
GATGATGTTCACTCCTAATT+CGG 0.369822 4_4:+58447850 None:intergenic
CTTCCCAGTTGTTCTCGCCT+TGG 0.372841 4_4:+58450172 None:intergenic
GGCTTTCGTTGAGCGATGTA+TGG 0.379405 4_4:-58450203 Msa0690580:CDS
CGCGAACGAGTAAACCGTTA+TGG 0.379883 4_4:+58447799 None:intergenic
GGAAAGGAAAAGGGTATTGT+TGG 0.381722 4_4:+58450353 None:intergenic
CGTTCGCGGGGCCGAGAGTT+GGG 0.383970 4_4:-58447784 Msa0690580:CDS
AATTAGTAAGTGAAATTAGT+TGG 0.384656 4_4:-58450664 Msa0690580:five_prime_UTR
CAAATCACGTGGTCCTTGAT+TGG 0.386663 4_4:+58447231 None:intergenic
ATAAGAGTTGTGATCTTCTA+AGG 0.392001 4_4:-58447430 Msa0690580:CDS
TGTGGAGCCCTTATGCTAAC+TGG 0.405947 4_4:-58449903 Msa0690580:CDS
TTGAAACTGAAATTTCTCAT+TGG 0.419763 4_4:+58447664 None:intergenic
TCGTTCGCGGGGCCGAGAGT+TGG 0.421350 4_4:-58447785 Msa0690580:CDS
GGAATTTGCACTTTAAAGAA+AGG 0.421543 4_4:-58447763 Msa0690580:CDS
GCAAGATGATGTGCAATATC+TGG 0.423197 4_4:+58447296 None:intergenic
CATCTTCCTCTTCGTGCAGT+TGG 0.426552 4_4:+58450268 None:intergenic
TTCTCATTGGTTATAATCCC+CGG 0.428050 4_4:+58447677 None:intergenic
GTGAAATTAGTTGGTTTACA+TGG 0.428115 4_4:-58450655 Msa0690580:five_prime_UTR
GGAGACAAGATGAGAATAAA+GGG 0.429109 4_4:-58447382 Msa0690580:CDS
GACAAGGTTCCAACCGTGCC+GGG 0.432120 4_4:-58447695 Msa0690580:CDS
AAAGGGTATTGTTGGATTTG+TGG 0.432416 4_4:+58450361 None:intergenic
GCTTCCACTAGAGGCCGTTC+AGG 0.434299 4_4:+58447326 None:intergenic
GAAGAAGAGATTAAACGTTT+AGG 0.434314 4_4:-58449853 Msa0690580:CDS
TGATGCTGATTTCTTCATCT+TGG 0.436804 4_4:+58447930 None:intergenic
GGTGGGAATGGGAAGGATAT+GGG 0.438040 4_4:+58450406 None:intergenic
CCTTGGAGTTATGCTCATGT+TGG 0.439341 4_4:-58447614 Msa0690580:CDS
CCATCAATCAAAGTAGAAAC+AGG 0.440706 4_4:-58448055 Msa0690580:CDS
CTGTTTCTACTTTGATTGAT+GGG 0.442102 4_4:+58448056 None:intergenic
TATCCCATCCAGTTAGCATA+AGG 0.442825 4_4:+58449895 None:intergenic
TTTAATCTCTTCTTCGTTGG+TGG 0.443070 4_4:+58449861 None:intergenic
GATCTTCTAAGGAGTGAGTT+TGG 0.443725 4_4:-58447419 Msa0690580:CDS
TAATAGAGTAATGGTAATAA+GGG 0.449692 4_4:+58450602 None:intergenic
TTGAATATAGATGGTGGGAA+TGG 0.451272 4_4:+58450394 None:intergenic
GCGAACGAGTAAACCGTTAT+GGG 0.455006 4_4:+58447800 None:intergenic
GTTATAATCCCCGGCACGGT+TGG 0.455037 4_4:+58447686 None:intergenic
ATAACGGTTTACTCGTTCGC+GGG 0.455590 4_4:-58447797 Msa0690580:CDS
CGTTTAGGACGCCGTGACAT+AGG 0.461230 4_4:-58449838 Msa0690580:intron
GAGCATTTGAGGAATAATAT+AGG 0.461593 4_4:+58450312 None:intergenic
GTAGAATAAAAGATAGATAG+TGG 0.468844 4_4:-58450499 Msa0690580:five_prime_UTR
AAACAAGATAATGGATGTAA+AGG 0.468899 4_4:-58447194 Msa0690580:three_prime_UTR
CATTTGATGGATGGGTATCA+TGG 0.469639 4_4:-58447503 Msa0690580:CDS
CACGTATGTTTCATTTAGCT+AGG 0.471394 4_4:-58447083 Msa0690580:three_prime_UTR
TGAATATAGATGGTGGGAAT+GGG 0.473721 4_4:+58450395 None:intergenic
AAAGAAAGGTGTGAAGAACT+TGG 0.475583 4_4:-58447749 Msa0690580:CDS
GGGGTGTACACATAATTTAG+AGG 0.480604 4_4:-58447534 Msa0690580:CDS
TATGTCGTAAGCGCTGAGTA+TGG 0.482762 4_4:+58447874 None:intergenic
ACGAAGAAGAAGAGCATTTG+AGG 0.487614 4_4:+58450301 None:intergenic
CTCTTTATATAGTGATTGCA+TGG 0.493736 4_4:-58448153 Msa0690580:intron
ATGATTTCTTTGCGTAGGAT+AGG 0.496867 4_4:+58450129 None:intergenic
TTATATAGTGATTGCATGGA+GGG 0.497247 4_4:-58448149 Msa0690580:intron
GGGATGGTTCAAACCGATGA+TGG 0.497989 4_4:-58447362 Msa0690580:CDS
ACGTTTAATCTCTTCTTCGT+TGG 0.501727 4_4:+58449858 None:intergenic
CACAACCCACCTTCCATCAT+CGG 0.503475 4_4:+58447349 None:intergenic
GGAGGCTAGAATGTTGGTTG+AGG 0.504919 4_4:+58450427 None:intergenic
AGGGTGTTATGAAGAAGAAC+AGG 0.507123 4_4:+58450447 None:intergenic
GAGAAACTTTACATGGGAGA+TGG 0.511262 4_4:-58450006 Msa0690580:CDS
GATCAAAACTCAAAATATTG+TGG 0.513294 4_4:-58450060 Msa0690580:CDS
TGACAAGGTTCCAACCGTGC+CGG 0.514175 4_4:-58447696 Msa0690580:CDS
TTTCTTTGAGAAACTTTACA+TGG 0.516670 4_4:-58450013 Msa0690580:CDS
GAGGCTAGAATGTTGGTTGA+GGG 0.517399 4_4:+58450428 None:intergenic
TTGCGTAGGATAGGATCCAT+TGG 0.518415 4_4:+58450138 None:intergenic
GCATTGGTAGCTTCCAATCA+AGG 0.520891 4_4:-58447244 Msa0690580:CDS
TGTGCCTGAACGGCCTCTAG+TGG 0.525389 4_4:-58447330 Msa0690580:CDS
AAGTGCAAATTCCCAACTCT+CGG 0.525702 4_4:+58447773 None:intergenic
TGAGAATGAACAATAAGTGC+AGG 0.528179 4_4:+58448000 None:intergenic
GCACCGTGACATACATAGAA+TGG 0.533607 4_4:-58448126 Msa0690580:CDS
GGAAGGTCTATTAGATCCAA+TGG 0.534597 4_4:-58450154 Msa0690580:CDS
ATCCCATCCAGTTAGCATAA+GGG 0.536253 4_4:+58449896 None:intergenic
GAGCCCTTATGCTAACTGGA+TGG 0.539926 4_4:-58449899 Msa0690580:CDS
GATATGGGAGGCTAGAATGT+TGG 0.543569 4_4:+58450421 None:intergenic
TTCGTGCAGTTGGTTCATAG+TGG 0.544421 4_4:+58450278 None:intergenic
CGTAAGCGCTGAGTATGGCT+AGG 0.545238 4_4:+58447879 None:intergenic
CGCAAAGAAATCATTCGCTA+TGG 0.545659 4_4:-58450120 Msa0690580:CDS
AGTTTCTCAAAGAAATGTGC+AGG 0.546930 4_4:+58450021 None:intergenic
AAAGTATATAGAAGATACAT+TGG 0.550653 4_4:-58447642 Msa0690580:CDS
TTGATGTTGCATAGAGGTAG+CGG 0.552703 4_4:+58449971 None:intergenic
ATTTCTTGAAGAATTTAGGA+AGG 0.554007 4_4:+58449941 None:intergenic
ACGTATGTTTCATTTAGCTA+GGG 0.554212 4_4:-58447082 Msa0690580:three_prime_UTR
GAAATCAGCATCACAGTCAC+AGG 0.555372 4_4:-58447920 Msa0690580:CDS
TCAAGATGTTAATGGCTCGT+TGG 0.565616 4_4:+58450533 None:intergenic
ACAGTCACAGGACACAGTCT+TGG 0.567549 4_4:-58447908 Msa0690580:CDS
AACAACTAACGTCCCCATAA+CGG 0.568948 4_4:-58447813 Msa0690580:CDS
GGGAATGGGAAGGATATGGG+AGG 0.569870 4_4:+58450409 None:intergenic
TTCTCATCTTGTCTCCAATG+TGG 0.570582 4_4:+58447389 None:intergenic
AGTTTGGTGTTCCACCACAT+TGG 0.571065 4_4:-58447403 Msa0690580:CDS
AATCGCATTCAAAATCGCAT+TGG 0.579406 4_4:-58447260 Msa0690580:CDS
CATAACGGTTTACTCGTTCG+CGG 0.581601 4_4:-58447798 Msa0690580:CDS
GAAGGTGGGTTGTGCCTGAA+CGG 0.583884 4_4:-58447340 Msa0690580:CDS
AGCCCTTATGCTAACTGGAT+GGG 0.586402 4_4:-58449898 Msa0690580:CDS
TCATCTTGTCTCCAATGTGG+TGG 0.589893 4_4:+58447392 None:intergenic
GGTGGATGAGCTTCCACTAG+AGG 0.592564 4_4:+58447317 None:intergenic
TGGTTCAAACCGATGATGGA+AGG 0.596118 4_4:-58447358 Msa0690580:CDS
TATAGATGGTGGGAATGGGA+AGG 0.596124 4_4:+58450399 None:intergenic
TTCAAACCGATGATGGAAGG+TGG 0.599261 4_4:-58447355 Msa0690580:CDS
ATTGGTTATAATCCCCGGCA+CGG 0.605638 4_4:+58447682 None:intergenic
AGCGAATGATTTCTTTGCGT+AGG 0.609122 4_4:+58450124 None:intergenic
TATATAGTGATTGCATGGAG+GGG 0.612515 4_4:-58448148 Msa0690580:intron
TATCCATTCTATGTATGTCA+CGG 0.618336 4_4:+58448123 None:intergenic
ACAAGGTTCCAACCGTGCCG+GGG 0.622173 4_4:-58447694 Msa0690580:CDS
TTTATATAGTGATTGCATGG+AGG 0.625462 4_4:-58448150 Msa0690580:intron
TATGAACCAACTGCACGAAG+AGG 0.628820 4_4:-58450274 Msa0690580:CDS
ATTTGATGGATGGGTATCAT+GGG 0.630818 4_4:-58447502 Msa0690580:CDS
TAACGGTTTACTCGTTCGCG+GGG 0.632196 4_4:-58447796 Msa0690580:CDS
ATATGGGATTAATAGAGTAA+TGG 0.632280 4_4:+58450593 None:intergenic
ACAAGATGAGAATAAAGGGA+TGG 0.636684 4_4:-58447378 Msa0690580:CDS
GTAAGCGCTGAGTATGGCTA+GGG 0.639224 4_4:+58447880 None:intergenic
AATCCAAGGCGAGAACAACT+GGG 0.639358 4_4:-58450175 Msa0690580:CDS
TTCTTTGAGAAACTTTACAT+GGG 0.642102 4_4:-58450012 Msa0690580:CDS
GGAGTGAACATCATCGAAGA+CGG 0.642474 4_4:-58447842 Msa0690580:CDS
TGATGTTTGATGTTGCATAG+AGG 0.642978 4_4:+58449965 None:intergenic
CAAGGCGAGAACAACTGGGA+AGG 0.645261 4_4:-58450171 Msa0690580:CDS
CGAACGAGTAAACCGTTATG+GGG 0.657882 4_4:+58447801 None:intergenic
CCAACATGAGCATAACTCCA+AGG 0.660120 4_4:+58447614 None:intergenic
TAGGGTACATACCTATGTCA+CGG 0.660260 4_4:+58449827 None:intergenic
AGTGGATCTAGTTCCTCGCA+TGG 0.665465 4_4:-58450481 Msa0690580:exon
TGAAGGAAAATGGTGATTTG+GGG 0.667189 4_4:-58447553 Msa0690580:CDS
AATCTAAGATCTCTTCAGTG+TGG 0.668543 4_4:-58449921 Msa0690580:CDS
GATGTATGGAGAGAAATCCA+AGG 0.668805 4_4:-58450189 Msa0690580:CDS
TCAAACCGATGATGGAAGGT+GGG 0.670175 4_4:-58447354 Msa0690580:CDS
ACATCGCTCAACGAAAGCCG+TGG 0.676341 4_4:+58450207 None:intergenic
AGATGATGTGCAATATCTGG+TGG 0.691855 4_4:+58447299 None:intergenic
AATACATAATATTCATGACA+AGG 0.698783 4_4:-58447711 Msa0690580:CDS
GGTACAAGAGAAGCCATGCG+AGG 0.705663 4_4:+58450468 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAAAAAATAAAA+AGG - chr4_4:58448412-58448431 Msa0690580:intron 0.0%
!! AAAAAATAATAATAATAAAA+AGG + chr4_4:58449426-58449445 None:intergenic 0.0%
!!! TTATTACTTTTGATTTTTTA+GGG + chr4_4:58448331-58448350 None:intergenic 10.0%
!!! TTTATTACTTTTGATTTTTT+AGG + chr4_4:58448332-58448351 None:intergenic 10.0%
!!! ATGTTTTTAAAAGAAATAAT+TGG - chr4_4:58449199-58449218 Msa0690580:intron 10.0%
!! GAAAGATAAAAAATTTAATA+TGG - chr4_4:58450187-58450206 Msa0690580:CDS 10.0%
!! GATTAGAGATATATAATATA+AGG + chr4_4:58447111-58447130 None:intergenic 15.0%
!!! GTAATTAAATTAAGAGTATA+GGG + chr4_4:58447861-58447880 None:intergenic 15.0%
!!! ATATAAATATATGGTCTTTT+GGG + chr4_4:58447928-58447947 None:intergenic 15.0%
!!! AATATAAATATATGGTCTTT+TGG + chr4_4:58447929-58447948 None:intergenic 15.0%
!! TCAGAAACAATATAAATATA+TGG + chr4_4:58447937-58447956 None:intergenic 15.0%
!!! AATATTAACAACTTTTAATG+CGG - chr4_4:58448221-58448240 Msa0690580:intron 15.0%
!!! TATTACTTTTGATTTTTTAG+GGG + chr4_4:58448330-58448349 None:intergenic 15.0%
!! TCAAAAGTAATAAAATTCAT+TGG - chr4_4:58448338-58448357 Msa0690580:intron 15.0%
!!! TTTTTTGAGATAAAATTCAT+TGG - chr4_4:58448370-58448389 Msa0690580:intron 15.0%
!! AATGAAGGTAAAAAAAAAAT+AGG + chr4_4:58448549-58448568 None:intergenic 15.0%
!!! TTTTCAATTTACAATAATGA+AGG + chr4_4:58448564-58448583 None:intergenic 15.0%
!!! AATCAAACAGTTTTAAAAAA+TGG - chr4_4:58448646-58448665 Msa0690580:intron 15.0%
!!! ATCAAACAGTTTTAAAAAAT+GGG - chr4_4:58448647-58448666 Msa0690580:intron 15.0%
!! ACTAAAAAAAGAAAAAAGAA+AGG - chr4_4:58449044-58449063 Msa0690580:intron 15.0%
!! CTAAAAAAAGAAAAAAGAAA+GGG - chr4_4:58449045-58449064 Msa0690580:intron 15.0%
!! ATTTCAATTATATATTGAGA+TGG + chr4_4:58449139-58449158 None:intergenic 15.0%
!!! AAAAAACTAGTATTTTTCTA+TGG + chr4_4:58449339-58449358 None:intergenic 15.0%
!! AAATTTCTTCAAAAAAGTAA+AGG - chr4_4:58449388-58449407 Msa0690580:intron 15.0%
!! AATTTAATATGGTTTCAAAA+AGG - chr4_4:58450198-58450217 Msa0690580:CDS 15.0%
!! ATTTAATATGGTTTCAAAAA+GGG - chr4_4:58450199-58450218 Msa0690580:CDS 15.0%
!!! TTCTCTTAAATTTTTCTTAA+AGG + chr4_4:58450629-58450648 None:intergenic 15.0%
!! AATTAGTAAGTGAAATTAGT+TGG - chr4_4:58447003-58447022 Msa0690580:three_prime_UTR 20.0%
!! TAATAGAGTAATGGTAATAA+GGG + chr4_4:58447068-58447087 None:intergenic 20.0%
!! TTAATAGAGTAATGGTAATA+AGG + chr4_4:58447069-58447088 None:intergenic 20.0%
!! AAAAATCATCAAGATGTTAA+TGG + chr4_4:58447145-58447164 None:intergenic 20.0%
!!! AATTATTAGGTTTTTTGGAA+AGG + chr4_4:58447333-58447352 None:intergenic 20.0%
!! AATAATATAGGCGAATTATT+AGG + chr4_4:58447346-58447365 None:intergenic 20.0%
!! TTAGATTTCTTGAAGAATTT+AGG + chr4_4:58447733-58447752 None:intergenic 20.0%
!!! GGTAATTAAATTAAGAGTAT+AGG + chr4_4:58447862-58447881 None:intergenic 20.0%
!!! ACTTATCTTTATTTTATGAG+TGG + chr4_4:58447883-58447902 None:intergenic 20.0%
!!! TCAAACAGTTTTAAAAAATG+GGG - chr4_4:58448648-58448667 Msa0690580:intron 20.0%
!!! AAAACACTTAATTTTTCAAG+TGG + chr4_4:58448846-58448865 None:intergenic 20.0%
!! AGAGAGAAAATCATTATTTA+TGG + chr4_4:58448909-58448928 None:intergenic 20.0%
!! GAATATTGCTATAAAAAAGA+TGG + chr4_4:58449092-58449111 None:intergenic 20.0%
!! TTAAAAGAAATAATTGGTGA+CGG - chr4_4:58449205-58449224 Msa0690580:intron 20.0%
!! AACCACTATAATTATTGTTA+TGG + chr4_4:58449298-58449317 None:intergenic 20.0%
!! ATAATAATAAAAAGGTCCAA+GGG + chr4_4:58449418-58449437 None:intergenic 20.0%
!! AATAATAATAAAAAGGTCCA+AGG + chr4_4:58449419-58449438 None:intergenic 20.0%
!! AATACATAATATTCATGACA+AGG - chr4_4:58449956-58449975 Msa0690580:CDS 20.0%
!! AAAGTATATAGAAGATACAT+TGG - chr4_4:58450025-58450044 Msa0690580:CDS 20.0%
! ATATGGGATTAATAGAGTAA+TGG + chr4_4:58447077-58447096 None:intergenic 25.0%
! GTAGAATAAAAGATAGATAG+TGG - chr4_4:58447168-58447187 Msa0690580:three_prime_UTR 25.0%
!!! TGATGGATTTTGAATATAGA+TGG + chr4_4:58447285-58447304 None:intergenic 25.0%
! GATCAAAACTCAAAATATTG+TGG - chr4_4:58447607-58447626 Msa0690580:CDS 25.0%
!! TTTCTTTGAGAAACTTTACA+TGG - chr4_4:58447654-58447673 Msa0690580:CDS 25.0%
!! TTCTTTGAGAAACTTTACAT+GGG - chr4_4:58447655-58447674 Msa0690580:CDS 25.0%
! ATTTCTTGAAGAATTTAGGA+AGG + chr4_4:58447729-58447748 None:intergenic 25.0%
! TTATTGGCAAAAAAAACATG+TGG - chr4_4:58448139-58448158 Msa0690580:CDS 25.0%
! TATTGGCAAAAAAAACATGT+GGG - chr4_4:58448140-58448159 Msa0690580:CDS 25.0%
! GAAAGAAAAAAGTTTGTGAT+TGG - chr4_4:58448170-58448189 Msa0690580:intron 25.0%
! TAAAAAGGCTTAAAACGATA+CGG - chr4_4:58448427-58448446 Msa0690580:intron 25.0%
!!! AGAGTTTAACTTTAAAACAG+AGG - chr4_4:58448711-58448730 Msa0690580:intron 25.0%
! CTTGAACTAGTAATCTATTA+AGG - chr4_4:58448739-58448758 Msa0690580:intron 25.0%
! TCAATTATATATTGAGATGG+TGG + chr4_4:58449136-58449155 None:intergenic 25.0%
!! TATTGTTATGGAGAACATTT+TGG + chr4_4:58449286-58449305 None:intergenic 25.0%
! CTCCATAACAATAATTATAG+TGG - chr4_4:58449293-58449312 Msa0690580:intron 25.0%
! TTGAAACTGAAATTTCTCAT+TGG + chr4_4:58450006-58450025 None:intergenic 25.0%
! TGTTGGAACTGAAATTAAAT+TGG - chr4_4:58450070-58450089 Msa0690580:CDS 25.0%
!!! TAGAAATAGTCCTTTTTTGA+AGG - chr4_4:58450097-58450116 Msa0690580:CDS 25.0%
!!! AAACAAGATAATGGATGTAA+AGG - chr4_4:58450473-58450492 Msa0690580:exon 25.0%
! GTGAAATTAGTTGGTTTACA+TGG - chr4_4:58447012-58447031 Msa0690580:three_prime_UTR 30.0%
! GGATTTTGAATATAGATGGT+GGG + chr4_4:58447281-58447300 None:intergenic 30.0%
! TGGATTTTGAATATAGATGG+TGG + chr4_4:58447282-58447301 None:intergenic 30.0%
!!! AGGTTTTTTGGAAAGGAAAA+GGG + chr4_4:58447326-58447345 None:intergenic 30.0%
!!! TAGGTTTTTTGGAAAGGAAA+AGG + chr4_4:58447327-58447346 None:intergenic 30.0%
!!! AGGCGAATTATTAGGTTTTT+TGG + chr4_4:58447338-58447357 None:intergenic 30.0%
GAGCATTTGAGGAATAATAT+AGG + chr4_4:58447358-58447377 None:intergenic 30.0%
AAAAAGAAGAAGAATCACCA+CGG - chr4_4:58447443-58447462 Msa0690580:CDS 30.0%
GAAGAAGAGATTAAACGTTT+AGG - chr4_4:58447814-58447833 Msa0690580:CDS 30.0%
! AATTGTTTCTTCTCTCTCTT+TGG - chr4_4:58447963-58447982 Msa0690580:CDS 30.0%
! ACTGACTTAGATGTATACAA+TGG - chr4_4:58447996-58448015 Msa0690580:CDS 30.0%
!!! TTTGCTATTCTTTTGACATG+TGG - chr4_4:58448110-58448129 Msa0690580:CDS 30.0%
!! TTGCTATTCTTTTGACATGT+GGG - chr4_4:58448111-58448130 Msa0690580:CDS 30.0%
AGAAAAAAGTTTGTGATTGG+TGG - chr4_4:58448173-58448192 Msa0690580:intron 30.0%
AAAAAATGGGGAATTAACTG+TGG - chr4_4:58448660-58448679 Msa0690580:intron 30.0%
ACTAATTGACCACTTTACAA+TGG - chr4_4:58448684-58448703 Msa0690580:intron 30.0%
TTTAGTTATGTTTGTGCGTA+AGG + chr4_4:58449030-58449049 None:intergenic 30.0%
!! ATGGAGAACATTTTGGTATT+TGG + chr4_4:58449279-58449298 None:intergenic 30.0%
CTCTTTATATAGTGATTGCA+TGG - chr4_4:58449514-58449533 Msa0690580:intron 30.0%
TTTATATAGTGATTGCATGG+AGG - chr4_4:58449517-58449536 Msa0690580:intron 30.0%
TTATATAGTGATTGCATGGA+GGG - chr4_4:58449518-58449537 Msa0690580:intron 30.0%
TATCCATTCTATGTATGTCA+CGG + chr4_4:58449547-58449566 None:intergenic 30.0%
! CTTCATGTAGAATGTCTTTT+AGG + chr4_4:58449575-58449594 None:intergenic 30.0%
!! CTGTTTCTACTTTGATTGAT+GGG + chr4_4:58449614-58449633 None:intergenic 30.0%
! GGAATTTGCACTTTAAAGAA+AGG - chr4_4:58449904-58449923 Msa0690580:CDS 30.0%
!!! AGTCCTTTTTTGAAGGAAAA+TGG - chr4_4:58450104-58450123 Msa0690580:CDS 30.0%
! TCACCATTTTCCTTCAAAAA+AGG + chr4_4:58450110-58450129 None:intergenic 30.0%
TTTGAAGGAAAATGGTGATT+TGG - chr4_4:58450112-58450131 Msa0690580:CDS 30.0%
TTGAAGGAAAATGGTGATTT+GGG - chr4_4:58450113-58450132 Msa0690580:CDS 30.0%
!! TACTTTTGCATTTGATGGAT+GGG - chr4_4:58450156-58450175 Msa0690580:CDS 30.0%
ATAAGAGTTGTGATCTTCTA+AGG - chr4_4:58450237-58450256 Msa0690580:CDS 30.0%
!!! CACGTGATTTGTTTTTAGTA+GGG - chr4_4:58450448-58450467 Msa0690580:CDS 30.0%
AGTAGGGAAAAACAAGATAA+TGG - chr4_4:58450464-58450483 Msa0690580:CDS 30.0%
ACGTATGTTTCATTTAGCTA+GGG - chr4_4:58450585-58450604 Msa0690580:five_prime_UTR 30.0%
TAAGGTGTGTGTGTGTATAT+GGG + chr4_4:58447093-58447112 None:intergenic 35.0%
ATAAGGTGTGTGTGTGTATA+TGG + chr4_4:58447094-58447113 None:intergenic 35.0%
!! TGAATATAGATGGTGGGAAT+GGG + chr4_4:58447275-58447294 None:intergenic 35.0%
!! TTGAATATAGATGGTGGGAA+TGG + chr4_4:58447276-58447295 None:intergenic 35.0%
ATTGTTGGATTTGTGGTTGA+TGG + chr4_4:58447302-58447321 None:intergenic 35.0%
!! AAAGGGTATTGTTGGATTTG+TGG + chr4_4:58447309-58447328 None:intergenic 35.0%
ATGATTTCTTTGCGTAGGAT+AGG + chr4_4:58447541-58447560 None:intergenic 35.0%
AGTTTCTCAAAGAAATGTGC+AGG + chr4_4:58447649-58447668 None:intergenic 35.0%
TGATGTTTGATGTTGCATAG+AGG + chr4_4:58447705-58447724 None:intergenic 35.0%
! AATCTAAGATCTCTTCAGTG+TGG - chr4_4:58447746-58447765 Msa0690580:CDS 35.0%
TTTAATCTCTTCTTCGTTGG+TGG + chr4_4:58447809-58447828 None:intergenic 35.0%
ACGTTTAATCTCTTCTTCGT+TGG + chr4_4:58447812-58447831 None:intergenic 35.0%
!!! TGACATGTGGGTTTTGTTAT+TGG - chr4_4:58448123-58448142 Msa0690580:CDS 35.0%
TGCGGAGATAGAGAAATTTA+TGG - chr4_4:58448239-58448258 Msa0690580:intron 35.0%
ACTCTTACTCCATTGTAAAG+TGG + chr4_4:58448696-58448715 None:intergenic 35.0%
ATAATAAAAAGGTCCAAGGG+CGG + chr4_4:58449415-58449434 None:intergenic 35.0%
TATATAGTGATTGCATGGAG+GGG - chr4_4:58449519-58449538 Msa0690580:intron 35.0%
!! CCTGTTTCTACTTTGATTGA+TGG + chr4_4:58449615-58449634 None:intergenic 35.0%
CCATCAATCAAAGTAGAAAC+AGG - chr4_4:58449612-58449631 Msa0690580:intron 35.0%
TGAGAATGAACAATAAGTGC+AGG + chr4_4:58449670-58449689 None:intergenic 35.0%
!!! GAAGTCGTTTTATTTCTGAG+AGG + chr4_4:58449707-58449726 None:intergenic 35.0%
!! TGATGCTGATTTCTTCATCT+TGG + chr4_4:58449740-58449759 None:intergenic 35.0%
GATGATGTTCACTCCTAATT+CGG + chr4_4:58449820-58449839 None:intergenic 35.0%
! AAAGAAAGGTGTGAAGAACT+TGG - chr4_4:58449918-58449937 Msa0690580:CDS 35.0%
! TTCTCATTGGTTATAATCCC+CGG + chr4_4:58449993-58450012 None:intergenic 35.0%
!!! AAGATACATTGGCTTTTCCT+TGG - chr4_4:58450036-58450055 Msa0690580:CDS 35.0%
TGAAGGAAAATGGTGATTTG+GGG - chr4_4:58450114-58450133 Msa0690580:CDS 35.0%
!!! AGAGGTACTTTTGCATTTGA+TGG - chr4_4:58450151-58450170 Msa0690580:CDS 35.0%
! GTACTTTTGCATTTGATGGA+TGG - chr4_4:58450155-58450174 Msa0690580:CDS 35.0%
! ATTTGATGGATGGGTATCAT+GGG - chr4_4:58450165-58450184 Msa0690580:CDS 35.0%
TGGAGACAAGATGAGAATAA+AGG - chr4_4:58450284-58450303 Msa0690580:CDS 35.0%
GGAGACAAGATGAGAATAAA+GGG - chr4_4:58450285-58450304 Msa0690580:CDS 35.0%
ACAAGATGAGAATAAAGGGA+TGG - chr4_4:58450289-58450308 Msa0690580:CDS 35.0%
AATCGCATTCAAAATCGCAT+TGG - chr4_4:58450407-58450426 Msa0690580:CDS 35.0%
CCTACTAAAAACAAATCACG+TGG + chr4_4:58450450-58450469 None:intergenic 35.0%
!!! CCACGTGATTTGTTTTTAGT+AGG - chr4_4:58450447-58450466 Msa0690580:CDS 35.0%
CACGTATGTTTCATTTAGCT+AGG - chr4_4:58450584-58450603 Msa0690580:five_prime_UTR 35.0%
TCAAGATGTTAATGGCTCGT+TGG + chr4_4:58447137-58447156 None:intergenic 40.0%
! AGGGTGTTATGAAGAAGAAC+AGG + chr4_4:58447223-58447242 None:intergenic 40.0%
!! GGAAAGGAAAAGGGTATTGT+TGG + chr4_4:58447317-58447336 None:intergenic 40.0%
!! ACGAAGAAGAAGAGCATTTG+AGG + chr4_4:58447369-58447388 None:intergenic 40.0%
GATGTATGGAGAGAAATCCA+AGG - chr4_4:58447478-58447497 Msa0690580:CDS 40.0%
GGAAGGTCTATTAGATCCAA+TGG - chr4_4:58447513-58447532 Msa0690580:CDS 40.0%
AGCGAATGATTTCTTTGCGT+AGG + chr4_4:58447546-58447565 None:intergenic 40.0%
CGCAAAGAAATCATTCGCTA+TGG - chr4_4:58447547-58447566 Msa0690580:CDS 40.0%
GAGAAACTTTACATGGGAGA+TGG - chr4_4:58447661-58447680 Msa0690580:CDS 40.0%
TTGATGTTGCATAGAGGTAG+CGG + chr4_4:58447699-58447718 None:intergenic 40.0%
ATCCCATCCAGTTAGCATAA+GGG + chr4_4:58447774-58447793 None:intergenic 40.0%
TATCCCATCCAGTTAGCATA+AGG + chr4_4:58447775-58447794 None:intergenic 40.0%
TAGGGTACATACCTATGTCA+CGG + chr4_4:58447843-58447862 None:intergenic 40.0%
AGTGCAGGATTGTTCTTTCT+TGG + chr4_4:58449655-58449674 None:intergenic 40.0%
AACAACTAACGTCCCCATAA+CGG - chr4_4:58449854-58449873 Msa0690580:CDS 40.0%
AAGTGCAAATTCCCAACTCT+CGG + chr4_4:58449897-58449916 None:intergenic 40.0%
GGGGTGTACACATAATTTAG+AGG - chr4_4:58450133-58450152 Msa0690580:CDS 40.0%
! CATTTGATGGATGGGTATCA+TGG - chr4_4:58450164-58450183 Msa0690580:CDS 40.0%
! GATCTTCTAAGGAGTGAGTT+TGG - chr4_4:58450248-58450267 Msa0690580:CDS 40.0%
TTCTCATCTTGTCTCCAATG+TGG + chr4_4:58450281-58450300 None:intergenic 40.0%
AGATGATGTGCAATATCTGG+TGG + chr4_4:58450371-58450390 None:intergenic 40.0%
GCAAGATGATGTGCAATATC+TGG + chr4_4:58450374-58450393 None:intergenic 40.0%
! GAGGCTAGAATGTTGGTTGA+GGG + chr4_4:58447242-58447261 None:intergenic 45.0%
GATATGGGAGGCTAGAATGT+TGG + chr4_4:58447249-58447268 None:intergenic 45.0%
!! TATAGATGGTGGGAATGGGA+AGG + chr4_4:58447271-58447290 None:intergenic 45.0%
! TTCGTGCAGTTGGTTCATAG+TGG + chr4_4:58447392-58447411 None:intergenic 45.0%
TATGAACCAACTGCACGAAG+AGG - chr4_4:58447393-58447412 Msa0690580:CDS 45.0%
AAATCCAAGGCGAGAACAAC+TGG - chr4_4:58447491-58447510 Msa0690580:CDS 45.0%
AATCCAAGGCGAGAACAACT+GGG - chr4_4:58447492-58447511 Msa0690580:CDS 45.0%
TTGCGTAGGATAGGATCCAT+TGG + chr4_4:58447532-58447551 None:intergenic 45.0%
AGCCCTTATGCTAACTGGAT+GGG - chr4_4:58447769-58447788 Msa0690580:CDS 45.0%
! AAAACGATACGGCGCTGAAA+AGG - chr4_4:58448438-58448457 Msa0690580:intron 45.0%
AAAAAGTAAAGGTCCGCCCT+TGG - chr4_4:58449399-58449418 Msa0690580:intron 45.0%
GCACCGTGACATACATAGAA+TGG - chr4_4:58449541-58449560 Msa0690580:intron 45.0%
GAAATCAGCATCACAGTCAC+AGG - chr4_4:58449747-58449766 Msa0690580:intron 45.0%
!! TATGTCGTAAGCGCTGAGTA+TGG + chr4_4:58449796-58449815 None:intergenic 45.0%
GCTTACGACATAGCCGAATT+AGG - chr4_4:58449804-58449823 Msa0690580:intron 45.0%
GGAGTGAACATCATCGAAGA+CGG - chr4_4:58449825-58449844 Msa0690580:intron 45.0%
CGAACGAGTAAACCGTTATG+GGG + chr4_4:58449869-58449888 None:intergenic 45.0%
GCGAACGAGTAAACCGTTAT+GGG + chr4_4:58449870-58449889 None:intergenic 45.0%
CATAACGGTTTACTCGTTCG+CGG - chr4_4:58449869-58449888 Msa0690580:CDS 45.0%
ATAACGGTTTACTCGTTCGC+GGG - chr4_4:58449870-58449889 Msa0690580:CDS 45.0%
ATTGGTTATAATCCCCGGCA+CGG + chr4_4:58449988-58450007 None:intergenic 45.0%
CCAACATGAGCATAACTCCA+AGG + chr4_4:58450056-58450075 None:intergenic 45.0%
CCTTGGAGTTATGCTCATGT+TGG - chr4_4:58450053-58450072 Msa0690580:CDS 45.0%
!! AGTTTGGTGTTCCACCACAT+TGG - chr4_4:58450264-58450283 Msa0690580:CDS 45.0%
TCATCTTGTCTCCAATGTGG+TGG + chr4_4:58450278-58450297 None:intergenic 45.0%
!! TGGTTCAAACCGATGATGGA+AGG - chr4_4:58450309-58450328 Msa0690580:CDS 45.0%
!! TTCAAACCGATGATGGAAGG+TGG - chr4_4:58450312-58450331 Msa0690580:CDS 45.0%
!! TCAAACCGATGATGGAAGGT+GGG - chr4_4:58450313-58450332 Msa0690580:CDS 45.0%
! GCATTGGTAGCTTCCAATCA+AGG - chr4_4:58450423-58450442 Msa0690580:CDS 45.0%
CAAATCACGTGGTCCTTGAT+TGG + chr4_4:58450439-58450458 None:intergenic 45.0%
! AGTGGATCTAGTTCCTCGCA+TGG - chr4_4:58447186-58447205 Msa0690580:three_prime_UTR 50.0%
! GGAGGCTAGAATGTTGGTTG+AGG + chr4_4:58447243-58447262 None:intergenic 50.0%
GGTGGGAATGGGAAGGATAT+GGG + chr4_4:58447264-58447283 None:intergenic 50.0%
TGGTGGGAATGGGAAGGATA+TGG + chr4_4:58447265-58447284 None:intergenic 50.0%
CATCTTCCTCTTCGTGCAGT+TGG + chr4_4:58447402-58447421 None:intergenic 50.0%
GGCTTTCGTTGAGCGATGTA+TGG - chr4_4:58447464-58447483 Msa0690580:CDS 50.0%
! TGCATAGAGGTAGCGGCTTA+TGG + chr4_4:58447692-58447711 None:intergenic 50.0%
TGTGGAGCCCTTATGCTAAC+TGG - chr4_4:58447764-58447783 Msa0690580:CDS 50.0%
GAGCCCTTATGCTAACTGGA+TGG - chr4_4:58447768-58447787 Msa0690580:CDS 50.0%
! GATACGGCGCTGAAAAGGAA+CGG - chr4_4:58448443-58448462 Msa0690580:intron 50.0%
ACAGTCACAGGACACAGTCT+TGG - chr4_4:58449759-58449778 Msa0690580:intron 50.0%
!! GTAAGCGCTGAGTATGGCTA+GGG + chr4_4:58449790-58449809 None:intergenic 50.0%
CGCGAACGAGTAAACCGTTA+TGG + chr4_4:58449871-58449890 None:intergenic 50.0%
TAACGGTTTACTCGTTCGCG+GGG - chr4_4:58449871-58449890 Msa0690580:CDS 50.0%
GGGATGGTTCAAACCGATGA+TGG - chr4_4:58450305-58450324 Msa0690580:CDS 50.0%
CACAACCCACCTTCCATCAT+CGG + chr4_4:58450321-58450340 None:intergenic 50.0%
GGTACAAGAGAAGCCATGCG+AGG + chr4_4:58447202-58447221 None:intergenic 55.0%
GGGAATGGGAAGGATATGGG+AGG + chr4_4:58447261-58447280 None:intergenic 55.0%
ACATCGCTCAACGAAAGCCG+TGG + chr4_4:58447463-58447482 None:intergenic 55.0%
CTTCCCAGTTGTTCTCGCCT+TGG + chr4_4:58447498-58447517 None:intergenic 55.0%
CAAGGCGAGAACAACTGGGA+AGG - chr4_4:58447496-58447515 Msa0690580:CDS 55.0%
! CGTTTAGGACGCCGTGACAT+AGG - chr4_4:58447829-58447848 Msa0690580:CDS 55.0%
!! CGTAAGCGCTGAGTATGGCT+AGG + chr4_4:58449791-58449810 None:intergenic 55.0%
TGACAAGGTTCCAACCGTGC+CGG - chr4_4:58449971-58449990 Msa0690580:CDS 55.0%
GTTATAATCCCCGGCACGGT+TGG + chr4_4:58449984-58450003 None:intergenic 55.0%
!! GAAGGTGGGTTGTGCCTGAA+CGG - chr4_4:58450327-58450346 Msa0690580:CDS 55.0%
GGTGGATGAGCTTCCACTAG+AGG + chr4_4:58450353-58450372 None:intergenic 55.0%
GACAAGGTTCCAACCGTGCC+GGG - chr4_4:58449972-58449991 Msa0690580:CDS 60.0%
ACAAGGTTCCAACCGTGCCG+GGG - chr4_4:58449973-58449992 Msa0690580:CDS 60.0%
TGTGCCTGAACGGCCTCTAG+TGG - chr4_4:58450337-58450356 Msa0690580:CDS 60.0%
GCTTCCACTAGAGGCCGTTC+AGG + chr4_4:58450344-58450363 None:intergenic 60.0%
TCGTTCGCGGGGCCGAGAGT+TGG - chr4_4:58449882-58449901 Msa0690580:CDS 70.0%
CGTTCGCGGGGCCGAGAGTT+GGG - chr4_4:58449883-58449902 Msa0690580:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 58446999 58450690 58446999 ID=Msa0690580;Name=Msa0690580
chr4_4 mRNA 58446999 58450690 58446999 ID=Msa0690580-mRNA-1;Parent=Msa0690580;Name=Msa0690580-mRNA-1;_AED=0.00;_eAED=0.00;_QI=206|1|1|1|1|1|2|236|524
chr4_4 exon 58446999 58448163 58446999 ID=Msa0690580-mRNA-1:exon:15702;Parent=Msa0690580-mRNA-1
chr4_4 exon 58449839 58450690 58449839 ID=Msa0690580-mRNA-1:exon:15701;Parent=Msa0690580-mRNA-1
chr4_4 five_prime_UTR 58450485 58450690 58450485 ID=Msa0690580-mRNA-1:five_prime_utr;Parent=Msa0690580-mRNA-1
chr4_4 CDS 58449839 58450484 58449839 ID=Msa0690580-mRNA-1:cds;Parent=Msa0690580-mRNA-1
chr4_4 CDS 58447235 58448163 58447235 ID=Msa0690580-mRNA-1:cds;Parent=Msa0690580-mRNA-1
chr4_4 three_prime_UTR 58446999 58447234 58446999 ID=Msa0690580-mRNA-1:three_prime_utr;Parent=Msa0690580-mRNA-1
Gene Sequence

>Msa0690580

ATGGCTTCTCTTGTACCTGTTCTTCTTCATAACACCCTCAACCAACATTCTAGCCTCCCATATCCTTCCCATTCCCACCATCTATATTCAAAATCCATCAACCACAAATCCAACAATACCCTTTTCCTTTCCAAAAAACCTAATAATTCGCCTATATTATTCCTCAAATGCTCTTCTTCTTCGTCCACTATGAACCAACTGCACGAAGAGGAAGATGAAGAAGAAGAAGAAGAAGAAAAAAAAGAAGAAGAATCACCACGGCTTTCGTTGAGCGATGTATGGAGAGAAATCCAAGGCGAGAACAACTGGGAAGGTCTATTAGATCCAATGGATCCTATCCTACGCAAAGAAATCATTCGCTATGGTGAGCTAGCTCAAGCATGTTACGATTCATTCGACTTTGATCAAAACTCAAAATATTGTGGAACATGCAAGTATCATCCTGCACATTTCTTTGAGAAACTTTACATGGGAGATGGATACACCATAAGCCGCTACCTCTATGCAACATCAAACATCAACCTTCCTAAATTCTTCAAGAAATCTAAGATCTCTTCAGTGTGGAGCCCTTATGCTAACTGGATGGGATACATAGCTGTTTCCACCAACGAAGAAGAGATTAAACGTTTAGGACGCCGTGACATAGTGATTGCATGGAGGGGCACCGTGACATACATAGAATGGATATACGACCTAAAAGACATTCTACATGAAGCAAACTTCAAAAACGACCCATCAATCAAAGTAGAAACAGGATTCTACGACTTATACACCAAGAAAGAACAATCCTGCACTTATTGTTCATTCTCAGCTCGAGAACAAGTCCTCTCAGAAATAAAACGACTTCTTCAATTCTACCAAGATGAAGAAATCAGCATCACAGTCACAGGACACAGTCTTGGTGCTGCCCTAGCCATACTCAGCGCTTACGACATAGCCGAATTAGGAGTGAACATCATCGAAGACGGTGACAAAACAACTAACGTCCCCATAACGGTTTACTCGTTCGCGGGGCCGAGAGTTGGGAATTTGCACTTTAAAGAAAGGTGTGAAGAACTTGGTGTTAAAGTTTTGAGAATACATAATATTCATGACAAGGTTCCAACCGTGCCGGGGATTATAACCAATGAGAAATTTCAGTTTCAAAAGTATATAGAAGATACATTGGCTTTTCCTTGGAGTTATGCTCATGTTGGAACTGAAATTAAATTGGATCATAGAAATAGTCCTTTTTTGAAGGAAAATGGTGATTTGGGGTGTACACATAATTTAGAGGTACTTTTGCATTTGATGGATGGGTATCATGGGAAAGATAAAAAATTTAATATGGTTTCAAAAAGGGATATTGCACTTGTGAATAAGAGTTGTGATCTTCTAAGGAGTGAGTTTGGTGTTCCACCACATTGGAGACAAGATGAGAATAAAGGGATGGTTCAAACCGATGATGGAAGGTGGGTTGTGCCTGAACGGCCTCTAGTGGAAGCTCATCCACCAGATATTGCACATCATCTTGCATTAGTGCTTAAAAATCGCATTCAAAATCGCATTGGTAGCTTCCAATCAAGGACCACGTGA

Protein sequence

>Msa0690580

MASLVPVLLHNTLNQHSSLPYPSHSHHLYSKSINHKSNNTLFLSKKPNNSPILFLKCSSSSSTMNQLHEEEDEEEEEEEKKEEESPRLSLSDVWREIQGENNWEGLLDPMDPILRKEIIRYGELAQACYDSFDFDQNSKYCGTCKYHPAHFFEKLYMGDGYTISRYLYATSNINLPKFFKKSKISSVWSPYANWMGYIAVSTNEEEIKRLGRRDIVIAWRGTVTYIEWIYDLKDILHEANFKNDPSIKVETGFYDLYTKKEQSCTYCSFSAREQVLSEIKRLLQFYQDEEISITVTGHSLGAALAILSAYDIAELGVNIIEDGDKTTNVPITVYSFAGPRVGNLHFKERCEELGVKVLRIHNIHDKVPTVPGIITNEKFQFQKYIEDTLAFPWSYAHVGTEIKLDHRNSPFLKENGDLGCTHNLEVLLHLMDGYHGKDKKFNMVSKRDIALVNKSCDLLRSEFGVPPHWRQDENKGMVQTDDGRWVVPERPLVEAHPPDIAHHLALVLKNRIQNRIGSFQSRTT*