AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0211520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0211520 MtrunA17_Chr2g0310331 89.157 415 36 1 1 415 186 591 0.0 775
Msa0211520 MtrunA17_Chr2g0310401 71.220 410 108 2 1 409 31 431 0.0 593
Msa0211520 MtrunA17_Chr8g0357411 69.268 410 116 2 1 409 188 588 0.0 586
Msa0211520 MtrunA17_Chr8g0357231 67.041 267 78 2 144 409 1 258 3.16e-130 375
Msa0211520 MtrunA17_Chr4g0023911 48.544 412 196 5 1 408 180 579 6.07e-124 370
Msa0211520 MtrunA17_Chr2g0323151 38.049 410 241 4 1 409 82 479 2.17e-87 273
Msa0211520 MtrunA17_Chr2g0323131 37.226 411 244 5 1 409 166 564 5.60e-86 272
Msa0211520 MtrunA17_Chr4g0042111 35.194 412 254 5 1 410 162 562 1.88e-79 255
Msa0211520 MtrunA17_Chr7g0217361 41.479 311 167 5 101 407 8 307 1.50e-78 245
Msa0211520 MtrunA17_Chr6g0465441 33.010 412 263 5 1 410 153 553 1.21e-75 245
Msa0211520 MtrunA17_Chr7g0236971 32.360 411 267 3 1 410 1 401 1.49e-73 235
Msa0211520 MtrunA17_Chr4g0024691 33.495 412 261 5 1 410 161 561 3.26e-73 239
Msa0211520 MtrunA17_Chr7g0236961 32.603 411 266 3 1 410 98 498 8.73e-73 236
Msa0211520 MtrunA17_Chr7g0237011 32.603 411 266 3 1 410 98 498 9.11e-73 236
Msa0211520 MtrunA17_Chr7g0236991 32.603 411 266 3 1 410 153 553 3.13e-72 236
Msa0211520 MtrunA17_Chr7g0237001 32.603 411 266 3 1 410 153 553 3.33e-72 236
Msa0211520 MtrunA17_Chr7g0237041 32.603 411 266 3 1 410 153 553 3.33e-72 236
Msa0211520 MtrunA17_Chr7g0237081 32.603 411 266 3 1 410 153 553 3.33e-72 236
Msa0211520 MtrunA17_Chr7g0237051 32.603 411 266 3 1 410 153 553 3.33e-72 236
Msa0211520 MtrunA17_Chr6g0451711 32.524 412 265 5 1 410 157 557 1.18e-71 234
Msa0211520 MtrunA17_Chr6g0465851 31.387 411 271 3 1 410 118 518 1.10e-69 228
Msa0211520 MtrunA17_Chr6g0465911 31.387 411 271 3 1 410 153 553 3.15e-69 228
Msa0211520 MtrunA17_Chr6g0466051 31.387 411 271 3 1 410 153 553 3.47e-69 228
Msa0211520 MtrunA17_Chr3g0082691 32.767 412 264 5 1 410 153 553 1.81e-68 226
Msa0211520 MtrunA17_Chr2g0319051 32.126 414 265 6 1 410 113 514 9.51e-67 221
Msa0211520 MtrunA17_Chr3g0105071 31.311 412 270 5 1 410 157 557 1.16e-66 221
Msa0211520 MtrunA17_Chr2g0319041 31.643 414 268 5 1 410 155 557 2.64e-66 221
Msa0211520 MtrunA17_Chr8g0336181 32.048 415 266 6 1 410 153 556 5.95e-65 217
Msa0211520 MtrunA17_Chr5g0425371 30.657 411 274 3 1 410 153 553 1.52e-64 216
Msa0211520 MtrunA17_Chr5g0431571 32.039 412 267 5 1 410 149 549 1.34e-62 211
Msa0211520 MtrunA17_Chr4g0048921 32.930 413 259 6 1 408 170 569 5.73e-61 207
Msa0211520 MtrunA17_Chr6g0477121 32.564 390 247 7 1 384 33 412 7.07e-61 203
Msa0211520 MtrunA17_Chr3g0108941 31.643 414 257 9 1 404 116 513 2.26e-60 204
Msa0211520 MtrunA17_Chr6g0477111 31.463 410 263 8 1 404 90 487 2.39e-60 203
Msa0211520 MtrunA17_Chr3g0105691 31.401 414 258 9 1 404 148 545 7.99e-60 203
Msa0211520 MtrunA17_Chr4g0048911 32.995 394 245 6 1 390 164 542 3.13e-59 202
Msa0211520 MtrunA17_Chr2g0280581 31.463 410 264 6 1 404 119 517 8.19e-59 200
Msa0211520 MtrunA17_Chr3g0109001 31.084 415 258 9 1 404 116 513 1.06e-58 199
Msa0211520 MtrunA17_Chr3g0109011 31.084 415 258 9 1 404 90 487 1.21e-58 199
Msa0211520 MtrunA17_Chr5g0431651 29.369 412 278 5 1 410 152 552 1.40e-58 200
Msa0211520 MtrunA17_Chr3g0109021 30.602 415 260 9 1 404 115 512 2.67e-58 199
Msa0211520 MtrunA17_Chr3g0108971 31.159 414 259 9 1 404 90 487 3.04e-58 198
Msa0211520 MtrunA17_Chr3g0109031 30.657 411 265 8 1 404 115 512 4.45e-58 198
Msa0211520 MtrunA17_Chr3g0108991 31.159 414 259 9 1 404 115 512 5.61e-58 197
Msa0211520 MtrunA17_Chr3g0108951 31.159 414 259 9 1 404 115 512 5.61e-58 197
Msa0211520 MtrunA17_Chr3g0108981 30.414 411 266 8 1 404 91 488 2.11e-57 196
Msa0211520 MtrunA17_Chr3g0108961 30.414 411 266 8 1 404 91 488 2.11e-57 196
Msa0211520 MtrunA17_Chr3g0099031 32.134 389 250 5 1 384 115 494 5.53e-57 195
Msa0211520 MtrunA17_Chr4g0008621 36.861 274 161 3 1 272 162 425 8.60e-54 185
Msa0211520 MtrunA17_Chr7g0237031 41.485 229 124 2 1 229 98 316 1.83e-52 178
Msa0211520 MtrunA17_Chr7g0236951 41.485 229 124 2 1 229 98 316 2.14e-52 177
Msa0211520 MtrunA17_Chr5g0445511 37.959 245 140 4 1 244 6 239 2.17e-51 172
Msa0211520 MtrunA17_Chr6g0465931 40.000 230 128 2 1 230 118 337 3.97e-51 175
Msa0211520 MtrunA17_Chr6g0466111 40.000 230 128 2 1 230 118 337 4.80e-51 175
Msa0211520 MtrunA17_Chr6g0465981 40.000 230 128 2 1 230 153 372 1.09e-50 175
Msa0211520 MtrunA17_Chr6g0465871 40.000 230 128 2 1 230 153 372 1.09e-50 175
Msa0211520 MtrunA17_Chr6g0466081 40.000 230 128 2 1 230 153 372 1.09e-50 175
Msa0211520 MtrunA17_Chr8g0357221 69.903 103 31 0 1 103 188 290 7.21e-42 149
Msa0211520 MtrunA17_Chr2g0319081 28.296 311 196 7 104 410 140 427 5.85e-35 134
Msa0211520 MtrunA17_Chr2g0319071 25.728 412 252 8 1 408 126 487 6.81e-34 132
Msa0211520 MtrunA17_Chr6g0466031 25.279 269 191 2 143 410 1 260 2.27e-30 117
Msa0211520 MtrunA17_Chr2g0281651 30.488 246 155 5 79 322 43 274 3.52e-28 115
Msa0211520 MtrunA17_Chr7g0233861 41.045 134 70 1 42 175 33 157 5.39e-27 106
Msa0211520 MtrunA17_Chr3g0101681 27.607 326 197 10 44 348 412 719 5.93e-27 113
Msa0211520 MtrunA17_Chr7g0237061 26.394 269 165 3 143 410 1 237 1.17e-26 107
Msa0211520 MtrunA17_Chr2g0310121 27.243 301 183 8 41 322 408 691 1.39e-25 109
Msa0211520 MtrunA17_Chr7g0237071 42.453 106 60 1 1 106 98 202 2.57e-18 83.6
Msa0211520 MtrunA17_Chr7g0217351 39.048 105 63 1 1 104 169 273 1.65e-14 73.9
Msa0211520 MtrunA17_Chr5g0445401 44.048 84 46 1 15 97 5 88 4.61e-13 64.7
Msa0211520 MtrunA17_Chr5g0445501 26.590 173 124 3 240 410 1 172 1.26e-12 65.9
Msa0211520 MtrunA17_Chr7g0237021 22.674 172 132 1 240 410 1 172 9.28e-12 63.5
Msa0211520 MtrunA17_Chr7g0236941 22.674 172 132 1 240 410 1 172 9.28e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0211520 AT3G25820.1 47.733 419 201 6 1 410 185 594 8.63e-135 399
Msa0211520 AT3G25830.1 47.733 419 201 6 1 410 185 594 8.63e-135 399
Msa0211520 AT3G25810.1 46.318 421 206 7 1 410 186 597 1.58e-129 386
Msa0211520 AT2G24210.1 46.209 422 206 9 1 410 178 590 4.14e-124 372
Msa0211520 AT4G16730.2 43.943 421 216 5 1 410 82 493 2.34e-123 367
Msa0211520 AT4G16730.1 43.943 421 216 5 1 410 128 539 6.15e-123 367
Msa0211520 AT4G16740.1 43.614 415 217 6 1 410 162 564 1.24e-119 359
Msa0211520 AT3G25820.2 46.512 258 126 3 1 255 185 433 6.11e-79 251
Msa0211520 AT1G61680.2 32.080 399 255 5 1 393 167 555 2.66e-63 213
Msa0211520 AT1G61680.1 32.080 399 255 5 1 393 174 562 3.09e-63 213
Msa0211520 AT4G16740.2 44.255 235 118 3 1 231 162 387 2.01e-62 206
Msa0211520 AT5G23960.2 31.490 416 263 7 1 410 146 545 1.15e-61 208
Msa0211520 AT5G23960.1 31.971 416 263 7 1 410 146 547 2.28e-61 207
Msa0211520 AT3G25820.4 51.124 178 84 2 1 175 185 362 2.69e-56 191
Msa0211520 AT3G25820.3 51.124 178 84 2 1 175 185 362 2.69e-56 191
Msa0211520 AT1G70080.1 31.463 410 264 7 1 403 205 604 2.48e-54 190
Msa0211520 AT1G31950.1 27.962 422 276 8 1 410 201 606 2.11e-52 185
Msa0211520 AT1G31950.3 27.962 422 276 8 1 410 202 607 2.15e-52 185
Msa0211520 AT3G14520.1 27.381 420 281 5 1 410 199 604 1.81e-51 182
Msa0211520 AT3G14540.1 26.667 420 284 6 1 410 196 601 2.05e-48 174
Msa0211520 AT3G29410.2 26.683 416 286 5 1 410 96 498 3.94e-47 169
Msa0211520 AT4G16740.4 47.486 179 90 2 1 175 162 340 1.07e-46 164
Msa0211520 AT4G16740.3 47.486 179 90 2 1 175 162 340 1.07e-46 164
Msa0211520 AT3G29410.1 26.683 416 286 5 1 410 201 603 1.66e-46 169
Msa0211520 AT1G33750.1 25.728 412 294 4 1 410 202 603 2.27e-44 163
Msa0211520 AT3G32030.1 25.845 414 294 5 1 410 200 604 4.46e-44 162
Msa0211520 AT3G14490.1 27.381 420 280 9 1 410 197 601 6.00e-44 162
Msa0211520 AT3G29190.1 28.502 414 283 5 1 410 197 601 5.78e-42 156
Msa0211520 AT4G15870.1 26.536 407 274 7 1 403 206 591 1.34e-40 152
Msa0211520 AT3G29110.1 27.670 412 285 5 1 408 193 595 6.79e-40 150
Msa0211520 AT1G31950.2 28.483 323 207 6 1 314 202 509 4.53e-39 147
Msa0211520 AT5G48110.1 27.635 351 239 7 62 410 2 339 1.57e-37 139
Msa0211520 AT1G66020.1 27.488 422 277 10 1 410 194 598 7.24e-37 142
Msa0211520 AT1G48820.1 28.467 411 262 9 1 405 175 559 1.53e-35 138
Msa0211520 AT2G23230.2 26.716 408 284 5 1 403 196 593 3.00e-35 137
Msa0211520 AT4G20230.1 25.980 408 288 6 1 403 200 598 3.72e-35 137
Msa0211520 AT4G20230.2 25.980 408 288 6 1 403 212 610 3.92e-35 137
Msa0211520 AT3G14540.2 26.380 326 220 4 1 319 196 508 5.70e-35 135
Msa0211520 AT5G44630.1 26.150 413 290 6 1 408 153 555 6.73e-35 136
Msa0211520 AT2G23230.1 26.034 411 284 5 1 406 196 591 4.12e-34 134
Msa0211520 AT4G20200.1 26.316 418 287 7 1 410 200 604 5.49e-34 134
Msa0211520 AT1G48800.1 27.913 412 275 8 1 403 201 599 6.61e-34 134
Msa0211520 AT4G20210.1 24.879 414 298 5 1 410 196 600 7.88e-33 130
Msa0211520 AT4G13280.2 25.240 416 294 8 1 410 150 554 8.45e-31 124
Msa0211520 AT1G79460.1 27.778 342 219 9 79 410 456 779 1.65e-30 124
Msa0211520 AT4G13300.1 24.939 413 295 7 1 408 150 552 2.19e-30 123
Msa0211520 AT4G13280.1 24.760 416 266 11 1 410 150 524 1.46e-23 103
Msa0211520 AT1G66020.2 31.081 222 136 6 1 219 194 401 2.42e-23 101
Msa0211520 AT1G61120.1 28.852 357 211 10 1 339 379 710 4.15e-22 99.4

Find 103 sgRNAs with CRISPR-Local

Find 171 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTAATTTCATTGTTAAAA+TGG 0.130163 2_1:-52858012 None:intergenic
AATATGTCTTTCCCTATATT+TGG 0.133526 2_1:+52857201 Msa0211520:five_prime_UTR
TTTACTTGAATTTGCTAAAT+TGG 0.149491 2_1:+52858628 Msa0211520:CDS
GCAATTCGATTCTGAATTTC+AGG 0.188613 2_1:-52860345 None:intergenic
ATGTAAATTCTTCTTCATTT+TGG 0.195839 2_1:-52858068 None:intergenic
CTAATTTCCAACCATCAATT+TGG 0.219395 2_1:+52857382 Msa0211520:five_prime_UTR
ATTTGAAGATGAACCTATAT+TGG 0.220192 2_1:+52858427 Msa0211520:CDS
ATACGTTCTTATCTTCATTT+TGG 0.245554 2_1:-52858496 None:intergenic
ATCATCAATGATGGTAATTA+AGG 0.253672 2_1:-52859306 None:intergenic
TTGATTGGGTAATATATATT+AGG 0.263204 2_1:+52857034 Msa0211520:five_prime_UTR
TTGAGTTGAACGAGGGAAAT+TGG 0.266820 2_1:-52857301 None:intergenic
TTAGCTATAAAAGGACAATT+TGG 0.287852 2_1:-52857180 None:intergenic
AAGAAAACTCCAACATAATT+AGG 0.306044 2_1:+52859951 Msa0211520:CDS
TCAATGCAAGGTATCATATA+TGG 0.307502 2_1:+52857320 Msa0211520:five_prime_UTR
TTTCGTAAATATTTAAAATC+TGG 0.312383 2_1:-52859263 None:intergenic
AAAGACATATTAGCTATAAA+AGG 0.313052 2_1:-52857189 None:intergenic
CAATGAAATTAGGGACATAT+TGG 0.313580 2_1:+52858021 Msa0211520:five_prime_UTR
GTCATTAACTAGTGAATATA+AGG 0.331422 2_1:+52857422 Msa0211520:five_prime_UTR
AGGATTCTACTCAAGCATTA+TGG 0.340231 2_1:+52857274 Msa0211520:five_prime_UTR
AATGGAAGAGTTCCAAATAT+AGG 0.340862 2_1:-52857213 None:intergenic
CAATGCTACATGAATGAAAC+TGG 0.341142 2_1:+52860144 Msa0211520:CDS
AAGTATAGTAGGTGCACTTA+TGG 0.345706 2_1:-52859870 None:intergenic
ATGTATACTTAAGGTCTTCT+TGG 0.346794 2_1:-52858676 None:intergenic
TCTCTTGCTTCATCCAATAT+AGG 0.348986 2_1:-52858440 None:intergenic
ATATATAAGTTATGCTTGAT+TGG 0.350285 2_1:+52857019 None:intergenic
TTTGTACATAAAATAGGAAT+AGG 0.364334 2_1:-52860384 None:intergenic
GGTTTGTTAATTCTCTTCGT+TGG 0.368778 2_1:-52857097 None:intergenic
ATGGAAGAGTTCCAAATATA+GGG 0.369243 2_1:-52857212 None:intergenic
GATTGGTTGAGAACTTTGTT+TGG 0.376926 2_1:+52859219 Msa0211520:CDS
ACTTCAAATAAGTCATGCTT+TGG 0.381812 2_1:+52858520 Msa0211520:CDS
TTTGGAACATCCACTGCATT+GGG 0.391831 2_1:+52858538 Msa0211520:CDS
ATGCTTTGCAAGGGATAGAT+TGG 0.394984 2_1:+52859202 Msa0211520:CDS
CTGAATTTCAGGATCTTGAA+TGG 0.407788 2_1:-52860334 None:intergenic
TAAGCATGAGTAAGTATAGT+AGG 0.415253 2_1:-52859881 None:intergenic
GTTTGTTAATTCTCTTCGTT+GGG 0.418243 2_1:-52857096 None:intergenic
TCTTCACAAAAGCAGTTGAT+AGG 0.429846 2_1:+52859366 Msa0211520:CDS
AGCACCTTGATGTATACTTA+AGG 0.432930 2_1:-52858685 None:intergenic
TGATCATAGGTCCAAATTGA+TGG 0.438502 2_1:-52857393 None:intergenic
TATATAAGTTATGCTTGATT+GGG 0.439538 2_1:+52857020 None:intergenic
ATGTAGCATTGAATTGACTT+TGG 0.445177 2_1:-52860132 None:intergenic
TGCTGAAAGCCTAATTATGT+TGG 0.450526 2_1:-52859960 None:intergenic
TGCTGTAAACCATGCTAGAA+TGG 0.450556 2_1:+52860278 Msa0211520:CDS
CTTTGGAACATCCACTGCAT+TGG 0.453996 2_1:+52858537 Msa0211520:CDS
GAGTCCCTCGATGGGAGGCT+AGG 0.467693 2_1:+52858561 Msa0211520:CDS
ATTGATGTATTGCAAAGGCT+TGG 0.476788 2_1:+52857980 Msa0211520:five_prime_UTR
TAATGACTGTATATGATCAT+AGG 0.488829 2_1:-52857406 None:intergenic
GGTCGGTTTGTTGACGTTGA+GGG 0.490013 2_1:+52858371 Msa0211520:five_prime_UTR
AAGAATGATGCTTAACAAAA+CGG 0.497193 2_1:+52857931 Msa0211520:five_prime_UTR
AGCGGATACACACCAAGCCT+TGG 0.500969 2_1:+52859821 Msa0211520:CDS
GAGACAATTTATGCTTTGCA+AGG 0.504853 2_1:+52859192 Msa0211520:CDS
TTTCAGGATCTTGAATGGTA+TGG 0.505009 2_1:-52860329 None:intergenic
TGCATTGGGGAGTCCCTCGA+TGG 0.509350 2_1:+52858552 Msa0211520:CDS
AACAAAACGGAAAATAAGCT+TGG 0.510731 2_1:+52857944 Msa0211520:five_prime_UTR
AAAGCAATGCTCAATTCTAA+AGG 0.512815 2_1:+52857901 Msa0211520:five_prime_UTR
GAGAATACTTAGAGAATGCA+TGG 0.516711 2_1:+52859843 Msa0211520:CDS
TTCATTCAAAATCGAAGACT+TGG 0.517056 2_1:+52859919 Msa0211520:CDS
TCTAAGTATTCTCCAAGGCT+TGG 0.517090 2_1:-52859833 None:intergenic
TTTATGTATCATCGTGGAGA+TGG 0.524795 2_1:+52860306 Msa0211520:CDS
GAGAACTTTGTTTGGACTGT+GGG 0.531644 2_1:+52859227 Msa0211520:CDS
CATATTTGATTGAAGCAAAG+TGG 0.534124 2_1:+52859792 Msa0211520:CDS
AACTGGAGCTTCTGAAGTTG+AGG 0.542366 2_1:+52860161 Msa0211520:CDS
AAACATGTTTATTAGTTCAG+TGG 0.543270 2_1:+52860451 Msa0211520:three_prime_UTR
CCCTCGTTCAACTCAATGCA+AGG 0.543886 2_1:+52857308 Msa0211520:five_prime_UTR
CTTCCACTCTATAAACATCA+TGG 0.551044 2_1:-52860202 None:intergenic
TGGTGGAAAAGAACTAAACT+TGG 0.552083 2_1:+52859170 Msa0211520:CDS
ATCGTACACATCATCAATGA+TGG 0.554157 2_1:-52859315 None:intergenic
CATAGGTCCAAATTGATGGT+TGG 0.559161 2_1:-52857389 None:intergenic
GGCTTGGTGTGTATCCGCTA+TGG 0.561057 2_1:-52859817 None:intergenic
GATGATGTGTACGATGTGTA+TGG 0.566503 2_1:+52859323 Msa0211520:CDS
AGCTTATTGATGTATTGCAA+AGG 0.567234 2_1:+52857975 Msa0211520:five_prime_UTR
AACTTACTTTATATGTTCCG+AGG 0.571077 2_1:-52860006 None:intergenic
TATCTTTCCGACTGTGATTG+AGG 0.571208 2_1:+52858214 Msa0211520:five_prime_UTR
AGGTCGGTTTGTTGACGTTG+AGG 0.572740 2_1:+52858370 Msa0211520:five_prime_UTR
CTTATAGATTCAATGACCTG+TGG 0.574503 2_1:-52858140 None:intergenic
CATGGTTATGATATATCCAC+AGG 0.575424 2_1:+52858124 Msa0211520:five_prime_UTR
TTCAGACTCTTGAGGCAACA+TGG 0.576372 2_1:+52858106 Msa0211520:five_prime_UTR
AGTCCATGATGTTTATAGAG+TGG 0.576983 2_1:+52860199 Msa0211520:CDS
AGACAATTTATGCTTTGCAA+GGG 0.578399 2_1:+52859193 Msa0211520:CDS
TAAACAATGCCATTCTAGCA+TGG 0.580248 2_1:-52860287 None:intergenic
TAGATGGGATCTAAATGCCA+TGG 0.583752 2_1:+52859479 Msa0211520:CDS
GTAGTTTGGGAGAGAATCCA+TGG 0.590044 2_1:-52859496 None:intergenic
ACCACCTAGCCTCCCATCGA+GGG 0.602909 2_1:-52858565 None:intergenic
GCATTGGGGAGTCCCTCGAT+GGG 0.605686 2_1:+52858553 Msa0211520:CDS
CGAGGGACTCCCCAATGCAG+TGG 0.607874 2_1:-52858548 None:intergenic
ATGTTCCGAGGTCATTAGCA+AGG 0.610811 2_1:-52859994 None:intergenic
TTTACGAAAAGTTATGACAA+AGG 0.613165 2_1:+52859277 Msa0211520:CDS
TTGGGGAGTCCCTCGATGGG+AGG 0.619853 2_1:+52858556 Msa0211520:CDS
AAGACCTTAAGTATACATCA+AGG 0.621822 2_1:+52858681 Msa0211520:CDS
TCCCTCGATGGGAGGCTAGG+TGG 0.625455 2_1:+52858564 Msa0211520:CDS
ATACGCCTTGCTAATGACCT+CGG 0.627860 2_1:+52859989 Msa0211520:CDS
TGAGAACTTTGTTTGGACTG+TGG 0.632658 2_1:+52859226 Msa0211520:CDS
GAGTCTGAACTCAAGTGCTG+TGG 0.635212 2_1:-52858092 None:intergenic
CATTCTCTAAGTATTCTCCA+AGG 0.643831 2_1:-52859838 None:intergenic
TTGGAACATCCACTGCATTG+GGG 0.645337 2_1:+52858539 Msa0211520:CDS
CACTTGAGTTCAGACTCTTG+AGG 0.649831 2_1:+52858098 Msa0211520:five_prime_UTR
TATTCAACCTCAATCACAGT+CGG 0.650641 2_1:-52858221 None:intergenic
AAACAATCAATACACTAACA+AGG 0.650702 2_1:-52860423 None:intergenic
ACCTTGCATTGAGTTGAACG+AGG 0.666241 2_1:-52857309 None:intergenic
CCTTGCATTGAGTTGAACGA+GGG 0.670798 2_1:-52857308 None:intergenic
AACCACCTAGCCTCCCATCG+AGG 0.678896 2_1:-52858566 None:intergenic
GCATTGTTTATGTATCATCG+TGG 0.679800 2_1:+52860300 Msa0211520:CDS
GTACGATGTGTATGGCACAT+TGG 0.688383 2_1:+52859331 Msa0211520:CDS
GAAGCAAAGTGGTACCATAG+CGG 0.735290 2_1:+52859803 Msa0211520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATAATAATTTTTATTA+TGG - chr2_1:52858822-52858841 None:intergenic 0.0%
!! TAATAATAATAATAATTATA+AGG - chr2_1:52859648-52859667 None:intergenic 0.0%
!!! ATTTCCTATAATATTTTTTA+AGG - chr2_1:52857068-52857087 None:intergenic 10.0%
!! CAATCCTTAAAAAATATTAT+AGG + chr2_1:52857061-52857080 Msa0211520:five_prime_UTR 15.0%
!!! GATCTAAATATATTTTTTCT+AGG + chr2_1:52857448-52857467 Msa0211520:intron 15.0%
!!! TTAAAGAATTATTTTTGTGT+GGG + chr2_1:52857587-52857606 Msa0211520:intron 15.0%
!!! TTTTCAAAAGATTTTTTACA+TGG - chr2_1:52857635-52857654 None:intergenic 15.0%
!!! GTAAAAAATCTTTTGAAAAA+TGG + chr2_1:52857636-52857655 Msa0211520:intron 15.0%
!! ATGAAAAACAAAATATTGTA+TGG + chr2_1:52857736-52857755 Msa0211520:intron 15.0%
!! TAATATATGGTTTCAAATTA+TGG - chr2_1:52858249-52858268 None:intergenic 15.0%
!! ATAATATTCCAAGTAATATA+TGG - chr2_1:52858262-52858281 None:intergenic 15.0%
!!! GAAATATGTAACTTTAAAAA+AGG + chr2_1:52858350-52858369 Msa0211520:five_prime_UTR 15.0%
!!! TATAAAAATCTACTTTTTAC+TGG - chr2_1:52858868-52858887 None:intergenic 15.0%
!!! TTTCGTAAATATTTAAAATC+TGG - chr2_1:52859266-52859285 None:intergenic 15.0%
!!! AGAAATTTTTTCAAATAAAG+TGG - chr2_1:52859426-52859445 None:intergenic 15.0%
!!! TAATGTTTTGTACATAAAAT+AGG - chr2_1:52860393-52860412 None:intergenic 15.0%
!! TTGATTGGGTAATATATATT+AGG + chr2_1:52857034-52857053 Msa0211520:five_prime_UTR 20.0%
!! CTACAATATATAGGAAAATT+TGG - chr2_1:52857121-52857140 None:intergenic 20.0%
!! TAGTACTTACTACAATATAT+AGG - chr2_1:52857130-52857149 None:intergenic 20.0%
!! TATATATTGTAGTAAGTACT+AGG + chr2_1:52857129-52857148 Msa0211520:intron 20.0%
!! AAAGACATATTAGCTATAAA+AGG - chr2_1:52857192-52857211 None:intergenic 20.0%
!!! ATATTTTTGGTAAAGCTAAA+TGG - chr2_1:52857234-52857253 None:intergenic 20.0%
!!! CTTAAAGAATTATTTTTGTG+TGG + chr2_1:52857586-52857605 Msa0211520:intron 20.0%
!!! TAAAGAATTATTTTTGTGTG+GGG + chr2_1:52857588-52857607 Msa0211520:intron 20.0%
!!! AAAATCTTTTGAAAAATGGA+AGG + chr2_1:52857640-52857659 Msa0211520:intron 20.0%
!!! AAAGTGTGATTATTTTTATG+TGG + chr2_1:52857713-52857732 Msa0211520:intron 20.0%
!!! TGTTAGCATTTTTCATATTT+AGG - chr2_1:52857847-52857866 None:intergenic 20.0%
!!! ACCATTTTAACAATGAAATT+AGG + chr2_1:52858011-52858030 Msa0211520:five_prime_UTR 20.0%
!!! CCATTTTAACAATGAAATTA+GGG + chr2_1:52858012-52858031 Msa0211520:five_prime_UTR 20.0%
!!! ATGTAAATTCTTCTTCATTT+TGG - chr2_1:52858071-52858090 None:intergenic 20.0%
!!! ATTTGAAACCATATATTACT+TGG + chr2_1:52858251-52858270 Msa0211520:intron 20.0%
!!! TATGTAACTTTAAAAAAGGT+CGG + chr2_1:52858354-52858373 Msa0211520:five_prime_UTR 20.0%
!!! TTTACTTGAATTTGCTAAAT+TGG + chr2_1:52858628-52858647 Msa0211520:CDS 20.0%
!!! TTCTAAAATTCGATAACAAA+TGG + chr2_1:52858926-52858945 Msa0211520:intron 20.0%
!! CAATAAAATTAAGCATTAGT+CGG - chr2_1:52859136-52859155 None:intergenic 20.0%
!!! GACTAATGCTTAATTTTATT+GGG + chr2_1:52859135-52859154 Msa0211520:intron 20.0%
!!! AATTTTTTCAAATAAAGTGG+AGG - chr2_1:52859423-52859442 None:intergenic 20.0%
!! AACAATTAGCGAAAAATTTA+AGG - chr2_1:52860069-52860088 None:intergenic 20.0%
!! TTTGTACATAAAATAGGAAT+AGG - chr2_1:52860387-52860406 None:intergenic 20.0%
! TTAGCTATAAAAGGACAATT+TGG - chr2_1:52857183-52857202 None:intergenic 25.0%
! AATATGTCTTTCCCTATATT+TGG + chr2_1:52857201-52857220 Msa0211520:five_prime_UTR 25.0%
! TAATGACTGTATATGATCAT+AGG - chr2_1:52857409-52857428 None:intergenic 25.0%
! GTCATTAACTAGTGAATATA+AGG + chr2_1:52857422-52857441 Msa0211520:five_prime_UTR 25.0%
!! TTCATATTTAGGACTTGTAA+TGG - chr2_1:52857836-52857855 None:intergenic 25.0%
!! TAACACCTTTTACTTAATTC+AGG + chr2_1:52857862-52857881 Msa0211520:intron 25.0%
! TACTTCCTGAATTAAGTAAA+AGG - chr2_1:52857870-52857889 None:intergenic 25.0%
! AAGAATGATGCTTAACAAAA+CGG + chr2_1:52857931-52857950 Msa0211520:five_prime_UTR 25.0%
! CCCTAATTTCATTGTTAAAA+TGG - chr2_1:52858015-52858034 None:intergenic 25.0%
! ATTTGAAGATGAACCTATAT+TGG + chr2_1:52858427-52858446 Msa0211520:CDS 25.0%
!! ATACGTTCTTATCTTCATTT+TGG - chr2_1:52858499-52858518 None:intergenic 25.0%
! TGAACATGTAATGTTTATCA+AGG - chr2_1:52858732-52858751 None:intergenic 25.0%
! CAAATGGAAAAACATTTCTA+AGG + chr2_1:52858942-52858961 Msa0211520:intron 25.0%
!! CGACTAATGCTTAATTTTAT+TGG + chr2_1:52859134-52859153 Msa0211520:intron 25.0%
! TTATTGGGTATATTTGAAGA+TGG + chr2_1:52859150-52859169 Msa0211520:intron 25.0%
! TTTACGAAAAGTTATGACAA+AGG + chr2_1:52859277-52859296 Msa0211520:CDS 25.0%
! ATCATCAATGATGGTAATTA+AGG - chr2_1:52859309-52859328 None:intergenic 25.0%
!!! ATTTTGTTGATGATTCTAGA+TGG + chr2_1:52859463-52859482 Msa0211520:CDS 25.0%
!!! TTTTGTTGATGATTCTAGAT+GGG + chr2_1:52859464-52859483 Msa0211520:CDS 25.0%
!! AGCATATTTTCATGTAGTTT+GGG - chr2_1:52859512-52859531 None:intergenic 25.0%
!! AAGCATATTTTCATGTAGTT+TGG - chr2_1:52859513-52859532 None:intergenic 25.0%
!! TTTGAAACTTTGAAAAAGTG+TGG + chr2_1:52859567-52859586 Msa0211520:CDS 25.0%
! AAGAAAACTCCAACATAATT+AGG + chr2_1:52859951-52859970 Msa0211520:CDS 25.0%
!!! AGTTTTTTTTCTCCTCTAAA+CGG + chr2_1:52860025-52860044 Msa0211520:intron 25.0%
! AAACAATCAATACACTAACA+AGG - chr2_1:52860426-52860445 None:intergenic 25.0%
! AAACATGTTTATTAGTTCAG+TGG + chr2_1:52860451-52860470 Msa0211520:three_prime_UTR 25.0%
! GTTTGTTAATTCTCTTCGTT+GGG - chr2_1:52857099-52857118 None:intergenic 30.0%
ATGGAAGAGTTCCAAATATA+GGG - chr2_1:52857215-52857234 None:intergenic 30.0%
AATGGAAGAGTTCCAAATAT+AGG - chr2_1:52857216-52857235 None:intergenic 30.0%
! GTAGAATCCTTCTTTTTAAC+AGG - chr2_1:52857264-52857283 None:intergenic 30.0%
! TCAATGCAAGGTATCATATA+TGG + chr2_1:52857320-52857339 Msa0211520:five_prime_UTR 30.0%
CTAATTTCCAACCATCAATT+TGG + chr2_1:52857382-52857401 Msa0211520:five_prime_UTR 30.0%
!! ACATGATTTGTTTCAATCAC+AGG + chr2_1:52857671-52857690 Msa0211520:intron 30.0%
AAAGCAATGCTCAATTCTAA+AGG + chr2_1:52857901-52857920 Msa0211520:five_prime_UTR 30.0%
AACAAAACGGAAAATAAGCT+TGG + chr2_1:52857944-52857963 Msa0211520:five_prime_UTR 30.0%
AGCTTATTGATGTATTGCAA+AGG + chr2_1:52857975-52857994 Msa0211520:five_prime_UTR 30.0%
CAATGAAATTAGGGACATAT+TGG + chr2_1:52858021-52858040 Msa0211520:five_prime_UTR 30.0%
ACTTCAAATAAGTCATGCTT+TGG + chr2_1:52858520-52858539 Msa0211520:CDS 30.0%
ATGTATACTTAAGGTCTTCT+TGG - chr2_1:52858679-52858698 None:intergenic 30.0%
AAGACCTTAAGTATACATCA+AGG + chr2_1:52858681-52858700 Msa0211520:CDS 30.0%
AAATTTAGTTGCTCACTTGT+AGG + chr2_1:52859081-52859100 Msa0211520:intron 30.0%
AGACAATTTATGCTTTGCAA+GGG + chr2_1:52859193-52859212 Msa0211520:CDS 30.0%
CATATTTGATTGAAGCAAAG+TGG + chr2_1:52859792-52859811 Msa0211520:CDS 30.0%
TAAGCATGAGTAAGTATAGT+AGG - chr2_1:52859884-52859903 None:intergenic 30.0%
! TCTTCGATTTTGAATGAATG+TGG - chr2_1:52859917-52859936 None:intergenic 30.0%
TTCATTCAAAATCGAAGACT+TGG + chr2_1:52859919-52859938 Msa0211520:CDS 30.0%
AACTTACTTTATATGTTCCG+AGG - chr2_1:52860009-52860028 None:intergenic 30.0%
!!! CTCTTTTTCACGCTTTAAAA+AGG - chr2_1:52860100-52860119 None:intergenic 30.0%
! TTTAAAGCGTGAAAAAGAGA+CGG + chr2_1:52860101-52860120 Msa0211520:intron 30.0%
! ATGTAGCATTGAATTGACTT+TGG - chr2_1:52860135-52860154 None:intergenic 30.0%
!! GGTTTGTTAATTCTCTTCGT+TGG - chr2_1:52857100-52857119 None:intergenic 35.0%
!! AACAGGTGGAAGCATATTTT+TGG - chr2_1:52857247-52857266 None:intergenic 35.0%
! GAATCCTTCTTTTTAACAGG+TGG - chr2_1:52857261-52857280 None:intergenic 35.0%
AGGATTCTACTCAAGCATTA+TGG + chr2_1:52857274-52857293 Msa0211520:five_prime_UTR 35.0%
TGATCATAGGTCCAAATTGA+TGG - chr2_1:52857396-52857415 None:intergenic 35.0%
ATTGATGTATTGCAAAGGCT+TGG + chr2_1:52857980-52857999 Msa0211520:five_prime_UTR 35.0%
CATGGTTATGATATATCCAC+AGG + chr2_1:52858124-52858143 Msa0211520:five_prime_UTR 35.0%
CTTATAGATTCAATGACCTG+TGG - chr2_1:52858143-52858162 None:intergenic 35.0%
TATTCAACCTCAATCACAGT+CGG - chr2_1:52858224-52858243 None:intergenic 35.0%
TCTCTTGCTTCATCCAATAT+AGG - chr2_1:52858443-52858462 None:intergenic 35.0%
AGCACCTTGATGTATACTTA+AGG - chr2_1:52858688-52858707 None:intergenic 35.0%
AAGGAACTGATACTTGAAGT+TGG - chr2_1:52858713-52858732 None:intergenic 35.0%
AACATTACATGTTCACGTTG+TGG + chr2_1:52858737-52858756 Msa0211520:intron 35.0%
TTGGGTATATTTGAAGATGG+TGG + chr2_1:52859153-52859172 Msa0211520:intron 35.0%
TGGTGGAAAAGAACTAAACT+TGG + chr2_1:52859170-52859189 Msa0211520:CDS 35.0%
GAGACAATTTATGCTTTGCA+AGG + chr2_1:52859192-52859211 Msa0211520:CDS 35.0%
! GATTGGTTGAGAACTTTGTT+TGG + chr2_1:52859219-52859238 Msa0211520:CDS 35.0%
ATCGTACACATCATCAATGA+TGG - chr2_1:52859318-52859337 None:intergenic 35.0%
TCTTCACAAAAGCAGTTGAT+AGG + chr2_1:52859366-52859385 Msa0211520:CDS 35.0%
!!! TTTTCAGGTATGGAGTGATA+TGG - chr2_1:52859596-52859615 None:intergenic 35.0%
!!! TAATGCTTACCGCTTTTTTC+AGG - chr2_1:52859611-52859630 None:intergenic 35.0%
CATTCTCTAAGTATTCTCCA+AGG - chr2_1:52859841-52859860 None:intergenic 35.0%
GAGAATACTTAGAGAATGCA+TGG + chr2_1:52859843-52859862 Msa0211520:CDS 35.0%
AAGTATAGTAGGTGCACTTA+TGG - chr2_1:52859873-52859892 None:intergenic 35.0%
TGCTGAAAGCCTAATTATGT+TGG - chr2_1:52859963-52859982 None:intergenic 35.0%
!!! TGCATTTTTAGTCCGTTTAG+AGG - chr2_1:52860040-52860059 None:intergenic 35.0%
TTAAAGCGTGAAAAAGAGAC+GGG + chr2_1:52860102-52860121 Msa0211520:intron 35.0%
CAATGCTACATGAATGAAAC+TGG + chr2_1:52860144-52860163 Msa0211520:CDS 35.0%
AGTCCATGATGTTTATAGAG+TGG + chr2_1:52860199-52860218 Msa0211520:CDS 35.0%
CTTCCACTCTATAAACATCA+TGG - chr2_1:52860205-52860224 None:intergenic 35.0%
TAAACAATGCCATTCTAGCA+TGG - chr2_1:52860290-52860309 None:intergenic 35.0%
GCATTGTTTATGTATCATCG+TGG + chr2_1:52860300-52860319 Msa0211520:CDS 35.0%
TTTATGTATCATCGTGGAGA+TGG + chr2_1:52860306-52860325 Msa0211520:CDS 35.0%
TTTCAGGATCTTGAATGGTA+TGG - chr2_1:52860332-52860351 None:intergenic 35.0%
CTGAATTTCAGGATCTTGAA+TGG - chr2_1:52860337-52860356 None:intergenic 35.0%
GCAATTCGATTCTGAATTTC+AGG - chr2_1:52860348-52860367 None:intergenic 35.0%
AGGAAAACAAGAAATCCCCA+CGG + chr2_1:52857149-52857168 Msa0211520:intron 40.0%
! AATTTGGTTAGTTCTCCGTG+GGG - chr2_1:52857167-52857186 None:intergenic 40.0%
! CAATTTGGTTAGTTCTCCGT+GGG - chr2_1:52857168-52857187 None:intergenic 40.0%
! ACAATTTGGTTAGTTCTCCG+TGG - chr2_1:52857169-52857188 None:intergenic 40.0%
GCTTCCACCTGTTAAAAAGA+AGG + chr2_1:52857254-52857273 Msa0211520:five_prime_UTR 40.0%
!! TTGAGTTGAACGAGGGAAAT+TGG - chr2_1:52857304-52857323 None:intergenic 40.0%
! CATAGGTCCAAATTGATGGT+TGG - chr2_1:52857392-52857411 None:intergenic 40.0%
TATCTTTCCGACTGTGATTG+AGG + chr2_1:52858214-52858233 Msa0211520:five_prime_UTR 40.0%
! TTTGGAACATCCACTGCATT+GGG + chr2_1:52858538-52858557 Msa0211520:CDS 40.0%
ATGCTTTGCAAGGGATAGAT+TGG + chr2_1:52859202-52859221 Msa0211520:CDS 40.0%
! TGAGAACTTTGTTTGGACTG+TGG + chr2_1:52859226-52859245 Msa0211520:CDS 40.0%
! GAGAACTTTGTTTGGACTGT+GGG + chr2_1:52859227-52859246 Msa0211520:CDS 40.0%
GATGATGTGTACGATGTGTA+TGG + chr2_1:52859323-52859342 Msa0211520:CDS 40.0%
TAGATGGGATCTAAATGCCA+TGG + chr2_1:52859479-52859498 Msa0211520:CDS 40.0%
CACTCCATACCTGAAAAAAG+CGG + chr2_1:52859599-52859618 Msa0211520:CDS 40.0%
!!! CTTACCGCTTTTTTCAGGTA+TGG - chr2_1:52859606-52859625 None:intergenic 40.0%
TCTAAGTATTCTCCAAGGCT+TGG - chr2_1:52859836-52859855 None:intergenic 40.0%
TGCTGTAAACCATGCTAGAA+TGG + chr2_1:52860278-52860297 Msa0211520:CDS 40.0%
!! CCTTGCATTGAGTTGAACGA+GGG - chr2_1:52857311-52857330 None:intergenic 45.0%
!! ACCTTGCATTGAGTTGAACG+AGG - chr2_1:52857312-52857331 None:intergenic 45.0%
CACTTGAGTTCAGACTCTTG+AGG + chr2_1:52858098-52858117 Msa0211520:five_prime_UTR 45.0%
TTCAGACTCTTGAGGCAACA+TGG + chr2_1:52858106-52858125 Msa0211520:five_prime_UTR 45.0%
!! CTTTGGAACATCCACTGCAT+TGG + chr2_1:52858537-52858556 Msa0211520:CDS 45.0%
TTGGAACATCCACTGCATTG+GGG + chr2_1:52858539-52858558 Msa0211520:CDS 45.0%
GTACGATGTGTATGGCACAT+TGG + chr2_1:52859331-52859350 Msa0211520:CDS 45.0%
GTAGTTTGGGAGAGAATCCA+TGG - chr2_1:52859499-52859518 None:intergenic 45.0%
GAAGCAAAGTGGTACCATAG+CGG + chr2_1:52859803-52859822 Msa0211520:CDS 45.0%
ATACGCCTTGCTAATGACCT+CGG + chr2_1:52859989-52860008 Msa0211520:CDS 45.0%
ATGTTCCGAGGTCATTAGCA+AGG - chr2_1:52859997-52860016 None:intergenic 45.0%
!! AACTGGAGCTTCTGAAGTTG+AGG + chr2_1:52860161-52860180 Msa0211520:CDS 45.0%
!! AAAAAATAAAATTTGATAAA+TGG - chr2_1:52857778-52857797 None:intergenic 5.0%
!! TATTATTATTATTATTATAG+TGG + chr2_1:52859753-52859772 Msa0211520:intron 5.0%
CCCTCGTTCAACTCAATGCA+AGG + chr2_1:52857308-52857327 Msa0211520:five_prime_UTR 50.0%
! GAGTCTGAACTCAAGTGCTG+TGG - chr2_1:52858095-52858114 None:intergenic 50.0%
!! AGGTCGGTTTGTTGACGTTG+AGG + chr2_1:52858370-52858389 Msa0211520:five_prime_UTR 50.0%
!! GGTCGGTTTGTTGACGTTGA+GGG + chr2_1:52858371-52858390 Msa0211520:five_prime_UTR 50.0%
!! GGCTTGGTGTGTATCCGCTA+TGG - chr2_1:52859820-52859839 None:intergenic 55.0%
AGCGGATACACACCAAGCCT+TGG + chr2_1:52859821-52859840 Msa0211520:CDS 55.0%
TGCATTGGGGAGTCCCTCGA+TGG + chr2_1:52858552-52858571 Msa0211520:CDS 60.0%
GCATTGGGGAGTCCCTCGAT+GGG + chr2_1:52858553-52858572 Msa0211520:CDS 60.0%
ACCACCTAGCCTCCCATCGA+GGG - chr2_1:52858568-52858587 None:intergenic 60.0%
AACCACCTAGCCTCCCATCG+AGG - chr2_1:52858569-52858588 None:intergenic 60.0%
CGAGGGACTCCCCAATGCAG+TGG - chr2_1:52858551-52858570 None:intergenic 65.0%
TTGGGGAGTCCCTCGATGGG+AGG + chr2_1:52858556-52858575 Msa0211520:CDS 65.0%
GAGTCCCTCGATGGGAGGCT+AGG + chr2_1:52858561-52858580 Msa0211520:CDS 65.0%
TCCCTCGATGGGAGGCTAGG+TGG + chr2_1:52858564-52858583 Msa0211520:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 52857033 52860489 52857033 ID=Msa0211520;Name=Msa0211520
chr2_1 mRNA 52857033 52860489 52857033 ID=Msa0211520-mRNA-1;Parent=Msa0211520;Name=Msa0211520-mRNA-1;_AED=0.06;_eAED=0.06;_QI=765|0.85|0.87|1|0.71|0.62|8|76|415
chr2_1 exon 52857033 52857105 52857033 ID=Msa0211520-mRNA-1:exon:14694;Parent=Msa0211520-mRNA-1
chr2_1 exon 52857172 52857443 52857172 ID=Msa0211520-mRNA-1:exon:14695;Parent=Msa0211520-mRNA-1
chr2_1 exon 52857884 52858235 52857884 ID=Msa0211520-mRNA-1:exon:14696;Parent=Msa0211520-mRNA-1
chr2_1 exon 52858327 52858702 52858327 ID=Msa0211520-mRNA-1:exon:14697;Parent=Msa0211520-mRNA-1
chr2_1 exon 52859169 52859387 52859169 ID=Msa0211520-mRNA-1:exon:14698;Parent=Msa0211520-mRNA-1
chr2_1 exon 52859455 52859620 52859455 ID=Msa0211520-mRNA-1:exon:14699;Parent=Msa0211520-mRNA-1
chr2_1 exon 52859773 52860021 52859773 ID=Msa0211520-mRNA-1:exon:14700;Parent=Msa0211520-mRNA-1
chr2_1 exon 52860108 52860489 52860108 ID=Msa0211520-mRNA-1:exon:14701;Parent=Msa0211520-mRNA-1
chr2_1 five_prime_UTR 52857033 52857105 52857033 ID=Msa0211520-mRNA-1:five_prime_utr;Parent=Msa0211520-mRNA-1
chr2_1 five_prime_UTR 52857172 52857443 52857172 ID=Msa0211520-mRNA-1:five_prime_utr;Parent=Msa0211520-mRNA-1
chr2_1 five_prime_UTR 52857884 52858235 52857884 ID=Msa0211520-mRNA-1:five_prime_utr;Parent=Msa0211520-mRNA-1
chr2_1 five_prime_UTR 52858327 52858394 52858327 ID=Msa0211520-mRNA-1:five_prime_utr;Parent=Msa0211520-mRNA-1
chr2_1 CDS 52858395 52858702 52858395 ID=Msa0211520-mRNA-1:cds;Parent=Msa0211520-mRNA-1
chr2_1 CDS 52859169 52859387 52859169 ID=Msa0211520-mRNA-1:cds;Parent=Msa0211520-mRNA-1
chr2_1 CDS 52859455 52859620 52859455 ID=Msa0211520-mRNA-1:cds;Parent=Msa0211520-mRNA-1
chr2_1 CDS 52859773 52860021 52859773 ID=Msa0211520-mRNA-1:cds;Parent=Msa0211520-mRNA-1
chr2_1 CDS 52860108 52860413 52860108 ID=Msa0211520-mRNA-1:cds;Parent=Msa0211520-mRNA-1
chr2_1 three_prime_UTR 52860414 52860489 52860414 ID=Msa0211520-mRNA-1:three_prime_utr;Parent=Msa0211520-mRNA-1
Gene Sequence

>Msa0211520

ATGTTATCATTGTATGAAGCGTCGTTTCATTCATTTGAAGATGAACCTATATTGGATGAAGCAAGAGATGTCACATCAAAGTTTCTCAAAGAATTTTTCGACCAAAATGAAGATAAGAACGTATCACTTCAAATAAGTCATGCTTTGGAACATCCACTGCATTGGGGAGTCCCTCGATGGGAGGCTAGGTGGTTCATTGATATATACGAAAGACAACAAAATAAGAATCATGTTTTACTTGAATTTGCTAAATTGGATTTCAACATTCTTCAAAGCTTCTACCAAGAAGACCTTAAGTATACATCAAGATGGTGGAAAAGAACTAAACTTGGAGACAATTTATGCTTTGCAAGGGATAGATTGGTTGAGAACTTTGTTTGGACTGTGGGAACAAATTTCAAACCAGATTTTAAATATTTACGAAAAGTTATGACAAAGGTCAATTCCTTAATTACCATCATTGATGATGTGTACGATGTGTATGGCACATTGGAAGAACTAGAGCTCTTCACAAAAGCAGTTGATAGTGAGTCATATTTTGTTGATGATTCTAGATGGGATCTAAATGCCATGGATTCTCTCCCAAACTACATGAAAATATGCTTTCATGCACTCTATAACTTTGTGAGTGAACTTGCTTTTGAAACTTTGAAAAAGTGTGGCTACCATATCACTCCATACCTGAAAAAAGCGTGGACAGATCTATGTAAATCATATTTGATTGAAGCAAAGTGGTACCATAGCGGATACACACCAAGCCTTGGAGAATACTTAGAGAATGCATGGATTTCCATAAGTGCACCTACTATACTTACTCATGCTTACTTTGTGATTCCACATTCATTCAAAATCGAAGACTTGGTTAGTTTAGAAGAAAACTCCAACATAATTAGGCTTTCAGCAATAATTATACGCCTTGCTAATGACCTCGGAACATATAAACGTGAAAAAGAGACGGGTGATATTCCAAAGTCAATTCAATGCTACATGAATGAAACTGGAGCTTCTGAAGTTGAGGCTTGTGAGTATGTTAAGTCCATGATGTTTATAGAGTGGAAGAAGTTGAATAAAGAAGCTCATAGTTCATCTTTTTCTCAATGTTTCATAGATACTGCTGTAAACCATGCTAGAATGGCATTGTTTATGTATCATCGTGGAGATGGCCATACCATTCAAGATCCTGAAATTCAGAATCGAATTGCATCATTAGTTTTTCAGCCTATTCCTATTTTATGTACAAAACATTAA
Protein sequence

>Msa0211520

MLSLYEASFHSFEDEPILDEARDVTSKFLKEFFDQNEDKNVSLQISHALEHPLHWGVPRWEARWFIDIYERQQNKNHVLLEFAKLDFNILQSFYQEDLKYTSRWWKRTKLGDNLCFARDRLVENFVWTVGTNFKPDFKYLRKVMTKVNSLITIIDDVYDVYGTLEELELFTKAVDSESYFVDDSRWDLNAMDSLPNYMKICFHALYNFVSELAFETLKKCGYHITPYLKKAWTDLCKSYLIEAKWYHSGYTPSLGEYLENAWISISAPTILTHAYFVIPHSFKIEDLVSLEENSNIIRLSAIIIRLANDLGTYKREKETGDIPKSIQCYMNETGASEVEACEYVKSMMFIEWKKLNKEAHSSSFSQCFIDTAVNHARMALFMYHRGDGHTIQDPEIQNRIASLVFQPIPILCTKH*