AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0328840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0328840 MtrunA17_Chr2g0310331 85.570 596 79 3 1 594 1 591 0.0 1053
Msa0328840 MtrunA17_Chr8g0357411 69.440 589 178 2 1 588 1 588 0.0 843
Msa0328840 MtrunA17_Chr2g0310401 71.194 427 122 1 163 588 5 431 0.0 621
Msa0328840 MtrunA17_Chr4g0023911 47.059 561 281 8 35 587 27 579 3.62e-168 491
Msa0328840 MtrunA17_Chr8g0357221 68.041 291 92 1 1 291 1 290 6.36e-137 400
Msa0328840 MtrunA17_Chr8g0357231 68.992 258 79 1 332 588 1 258 9.64e-130 380
Msa0328840 MtrunA17_Chr4g0042111 38.462 546 321 8 55 589 21 562 1.44e-119 365
Msa0328840 MtrunA17_Chr2g0323131 37.381 527 318 6 64 588 48 564 5.95e-111 343
Msa0328840 MtrunA17_Chr4g0024691 35.455 550 343 8 49 589 15 561 1.23e-108 337
Msa0328840 MtrunA17_Chr6g0465441 34.133 542 347 6 56 589 14 553 2.70e-108 336
Msa0328840 MtrunA17_Chr2g0323151 38.797 482 288 4 108 588 4 479 3.08e-108 333
Msa0328840 MtrunA17_Chr6g0451711 34.358 553 350 8 47 589 8 557 1.77e-106 331
Msa0328840 MtrunA17_Chr7g0236991 34.686 542 344 6 56 589 14 553 2.34e-106 331
Msa0328840 MtrunA17_Chr6g0466051 34.249 546 349 6 52 589 10 553 1.80e-105 328
Msa0328840 MtrunA17_Chr7g0237001 34.502 542 345 6 56 589 14 553 1.96e-105 328
Msa0328840 MtrunA17_Chr7g0237041 34.502 542 345 6 56 589 14 553 1.96e-105 328
Msa0328840 MtrunA17_Chr7g0237081 34.502 542 345 6 56 589 14 553 1.96e-105 328
Msa0328840 MtrunA17_Chr7g0237051 34.502 542 345 6 56 589 14 553 1.96e-105 328
Msa0328840 MtrunA17_Chr6g0465911 34.066 546 350 6 52 589 10 553 7.55e-105 327
Msa0328840 MtrunA17_Chr3g0082691 35.175 543 341 6 56 589 13 553 2.45e-104 326
Msa0328840 MtrunA17_Chr5g0425371 34.871 542 343 6 56 589 14 553 3.03e-104 325
Msa0328840 MtrunA17_Chr7g0236961 35.070 499 318 3 96 589 1 498 9.50e-103 320
Msa0328840 MtrunA17_Chr5g0431571 35.662 544 337 8 56 589 9 549 4.66e-102 320
Msa0328840 MtrunA17_Chr3g0105071 33.640 544 352 4 54 589 15 557 7.28e-102 319
Msa0328840 MtrunA17_Chr7g0237011 34.669 499 320 3 96 589 1 498 8.89e-102 317
Msa0328840 MtrunA17_Chr6g0465851 34.118 510 329 4 86 589 10 518 2.54e-101 317
Msa0328840 MtrunA17_Chr8g0336181 34.791 549 342 10 54 589 11 556 6.67e-99 312
Msa0328840 MtrunA17_Chr2g0319041 34.244 549 345 9 54 589 12 557 2.80e-98 310
Msa0328840 MtrunA17_Chr5g0431651 33.578 545 348 8 56 589 11 552 1.74e-94 300
Msa0328840 MtrunA17_Chr2g0319051 34.690 516 322 9 85 589 3 514 2.79e-94 298
Msa0328840 MtrunA17_Chr6g0465981 40.822 365 207 5 52 409 10 372 1.29e-85 271
Msa0328840 MtrunA17_Chr6g0465871 40.822 365 207 5 52 409 10 372 1.29e-85 271
Msa0328840 MtrunA17_Chr6g0466081 40.822 365 207 5 52 409 10 372 1.29e-85 271
Msa0328840 MtrunA17_Chr4g0008621 38.155 401 235 6 54 443 19 417 1.50e-82 265
Msa0328840 MtrunA17_Chr4g0048921 33.789 512 325 7 83 587 65 569 1.63e-82 269
Msa0328840 MtrunA17_Chr6g0465931 41.641 329 186 3 86 409 10 337 2.09e-82 261
Msa0328840 MtrunA17_Chr6g0466111 41.641 329 186 3 86 409 10 337 2.82e-82 261
Msa0328840 MtrunA17_Chr2g0280581 33.735 498 316 6 80 563 2 499 1.27e-81 265
Msa0328840 MtrunA17_Chr7g0236951 42.587 317 177 2 96 408 1 316 1.07e-80 256
Msa0328840 MtrunA17_Chr4g0048911 33.140 516 328 9 64 569 34 542 1.17e-80 265
Msa0328840 MtrunA17_Chr3g0105691 32.197 528 330 12 54 563 10 527 1.44e-80 263
Msa0328840 MtrunA17_Chr3g0108941 32.803 503 310 12 80 563 2 495 1.62e-80 263
Msa0328840 MtrunA17_Chr7g0237031 41.956 317 179 2 96 408 1 316 8.48e-80 254
Msa0328840 MtrunA17_Chr3g0109001 33.201 503 308 12 80 563 2 495 2.01e-79 259
Msa0328840 MtrunA17_Chr3g0109021 31.864 499 319 9 80 563 2 494 1.73e-78 257
Msa0328840 MtrunA17_Chr3g0109031 31.717 495 325 8 80 563 2 494 3.09e-78 256
Msa0328840 MtrunA17_Chr3g0099031 32.186 494 324 6 80 563 2 494 1.47e-77 254
Msa0328840 MtrunA17_Chr3g0108991 32.072 502 314 11 80 563 2 494 3.23e-77 254
Msa0328840 MtrunA17_Chr3g0108951 32.072 502 314 11 80 563 2 494 3.23e-77 254
Msa0328840 MtrunA17_Chr7g0217361 41.060 302 172 4 289 586 8 307 1.38e-76 245
Msa0328840 MtrunA17_Chr6g0477111 32.906 468 296 9 110 563 6 469 2.40e-76 251
Msa0328840 MtrunA17_Chr7g0236971 33.333 402 266 2 189 589 1 401 3.40e-76 248
Msa0328840 MtrunA17_Chr3g0109011 32.285 477 297 10 105 563 1 469 1.28e-74 246
Msa0328840 MtrunA17_Chr3g0108981 31.847 471 308 8 105 563 1 470 1.02e-73 244
Msa0328840 MtrunA17_Chr3g0108961 31.847 471 308 8 105 563 1 470 1.02e-73 244
Msa0328840 MtrunA17_Chr3g0108971 32.075 477 298 10 105 563 1 469 1.12e-73 244
Msa0328840 MtrunA17_Chr2g0310411 66.867 166 51 3 1 164 1 164 3.35e-66 213
Msa0328840 MtrunA17_Chr6g0477121 33.333 402 258 7 171 563 12 412 1.24e-65 220
Msa0328840 MtrunA17_Chr5g0445511 40.789 228 133 2 184 410 1 227 3.71e-56 189
Msa0328840 MtrunA17_Chr2g0319071 29.240 513 306 11 85 587 22 487 1.08e-52 187
Msa0328840 MtrunA17_Chr3g0101681 30.155 451 278 14 107 527 276 719 7.96e-45 170
Msa0328840 MtrunA17_Chr2g0310121 29.314 423 265 11 107 501 275 691 4.22e-44 168
Msa0328840 MtrunA17_Chr7g0237071 40.887 203 115 2 96 294 1 202 6.24e-42 150
Msa0328840 MtrunA17_Chr2g0319081 29.373 303 194 7 292 589 140 427 4.88e-37 143
Msa0328840 MtrunA17_Chr2g0319081 41.026 117 60 4 56 164 21 136 5.05e-12 68.2
Msa0328840 MtrunA17_Chr6g0466031 26.154 260 191 1 331 589 1 260 4.84e-33 127
Msa0328840 MtrunA17_Chr6g0466021 40.933 193 105 5 52 237 10 200 1.08e-31 121
Msa0328840 MtrunA17_Chr7g0217351 37.629 194 112 4 105 292 83 273 2.78e-31 123
Msa0328840 MtrunA17_Chr2g0281651 31.646 237 155 4 267 501 43 274 1.03e-30 124
Msa0328840 MtrunA17_Chr7g0237061 27.692 260 164 2 331 589 1 237 2.15e-30 119
Msa0328840 MtrunA17_Chr7g0233861 41.481 135 70 1 230 364 33 158 2.96e-27 108
Msa0328840 MtrunA17_Chr7g0259881 27.273 286 171 7 111 366 233 511 2.34e-23 104
Msa0328840 MtrunA17_Chr7g0218001 29.615 260 152 6 110 339 349 607 4.04e-22 101
Msa0328840 MtrunA17_Chr7g0218041 28.452 239 147 5 151 366 1 238 2.31e-16 81.6
Msa0328840 MtrunA17_Chr5g0445501 26.163 172 126 1 419 589 1 172 4.05e-15 73.6
Msa0328840 MtrunA17_Chr7g0236981 33.884 121 72 4 56 169 14 133 5.14e-14 69.7
Msa0328840 MtrunA17_Chr7g0237021 23.256 172 131 1 419 589 1 172 2.71e-13 68.6
Msa0328840 MtrunA17_Chr7g0236941 23.256 172 131 1 419 589 1 172 2.71e-13 68.6
Msa0328840 MtrunA17_Chr5g0445401 44.048 84 46 1 203 285 5 88 6.98e-13 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0328840 AT3G25820.1 46.303 568 284 11 40 589 30 594 2.36e-172 503
Msa0328840 AT3G25830.1 46.303 568 284 11 40 589 30 594 2.36e-172 503
Msa0328840 AT2G24210.1 46.655 553 278 11 51 589 41 590 5.47e-169 493
Msa0328840 AT4G16740.1 44.348 575 285 11 36 589 4 564 4.33e-164 480
Msa0328840 AT3G25810.1 46.512 559 270 14 54 589 45 597 4.17e-163 479
Msa0328840 AT4G16730.1 45.047 535 278 6 71 589 5 539 1.30e-162 475
Msa0328840 AT4G16730.2 45.436 493 256 5 110 589 1 493 2.26e-153 450
Msa0328840 AT3G25820.2 44.963 407 209 8 40 434 30 433 1.67e-116 354
Msa0328840 AT4G16740.2 44.557 395 188 8 36 410 4 387 1.54e-105 324
Msa0328840 AT3G25820.4 45.401 337 169 8 40 364 30 363 6.75e-91 286
Msa0328840 AT3G25820.3 45.401 337 169 8 40 364 30 363 6.75e-91 286
Msa0328840 AT5G23960.2 32.787 549 348 10 54 589 5 545 2.48e-90 289
Msa0328840 AT5G23960.1 33.031 551 346 11 54 589 5 547 1.64e-89 287
Msa0328840 AT4G16740.4 43.514 370 178 8 36 385 4 362 4.42e-88 278
Msa0328840 AT4G16740.3 43.514 370 178 8 36 385 4 362 4.42e-88 278
Msa0328840 AT1G61680.1 35.118 467 295 5 106 566 92 556 2.04e-87 282
Msa0328840 AT1G61680.2 34.904 467 289 6 106 566 92 549 2.27e-86 280
Msa0328840 AT3G14520.1 28.622 566 378 10 40 589 49 604 3.14e-74 248
Msa0328840 AT1G70080.1 31.434 544 357 8 53 582 63 604 1.53e-73 247
Msa0328840 AT1G31950.1 28.336 547 366 11 60 589 69 606 4.11e-73 246
Msa0328840 AT1G31950.3 28.285 548 366 11 60 589 69 607 1.60e-72 244
Msa0328840 AT3G29410.1 28.361 543 379 7 55 589 63 603 8.69e-72 242
Msa0328840 AT3G14540.1 28.070 570 376 12 40 589 46 601 4.62e-71 240
Msa0328840 AT1G33750.1 28.042 567 387 10 36 589 45 603 3.53e-68 232
Msa0328840 AT3G29410.2 27.689 502 351 5 96 589 1 498 5.06e-67 226
Msa0328840 AT3G32030.1 27.644 539 378 9 61 589 68 604 6.73e-64 221
Msa0328840 AT3G14490.1 29.159 559 356 17 55 589 59 601 1.26e-63 220
Msa0328840 AT3G29110.1 27.899 595 412 10 8 587 3 595 1.24e-59 209
Msa0328840 AT1G31950.2 28.731 449 297 9 60 493 69 509 2.70e-58 204
Msa0328840 AT4G15870.1 27.833 503 341 8 90 582 101 591 2.94e-57 202
Msa0328840 AT3G14540.2 28.151 476 312 10 40 498 46 508 3.56e-57 200
Msa0328840 AT3G29190.1 28.731 536 371 8 64 589 67 601 1.68e-56 201
Msa0328840 AT5G44630.1 28.926 484 336 7 111 587 73 555 3.78e-54 193
Msa0328840 AT4G20210.1 25.503 596 430 9 4 589 9 600 7.63e-54 193
Msa0328840 AT4G20200.1 27.437 554 379 11 52 589 58 604 2.19e-51 187
Msa0328840 AT4G20230.1 26.531 539 384 9 55 582 61 598 9.26e-51 185
Msa0328840 AT4G20230.2 26.531 539 384 9 55 582 73 610 1.18e-50 185
Msa0328840 AT1G48820.1 27.850 535 342 10 56 584 63 559 8.19e-49 179
Msa0328840 AT1G66020.1 28.046 517 347 11 90 589 90 598 2.59e-48 178
Msa0328840 AT4G13300.1 26.265 514 368 9 84 587 40 552 5.54e-48 176
Msa0328840 AT1G48800.1 27.734 512 352 9 85 582 92 599 2.28e-47 176
Msa0328840 AT2G23230.2 26.510 596 416 13 4 585 9 596 8.20e-46 171
Msa0328840 AT2G23230.1 26.633 597 409 14 4 585 9 591 1.72e-45 170
Msa0328840 AT4G13280.2 26.151 478 343 8 120 589 79 554 4.09e-44 166
Msa0328840 AT1G79460.1 26.901 513 338 12 107 589 274 779 1.44e-42 164
Msa0328840 AT5G48110.1 28.947 342 237 6 250 589 2 339 5.07e-41 152
Msa0328840 AT4G13280.1 25.314 478 317 10 120 589 79 524 1.17e-36 144
Msa0328840 AT1G66020.2 30.915 317 206 7 90 398 90 401 3.49e-36 140
Msa0328840 AT1G61120.1 30.227 440 271 14 104 518 282 710 1.01e-34 140
Msa0328840 AT4G02780.1 30.798 263 149 6 111 342 335 595 3.39e-22 101

Find 101 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACTTGAATTTGCTAAAT+TGG 0.149491 2_4:-41712701 Msa0328840:CDS
CCCTAATTTCATTATTAAAA+TGG 0.155653 2_4:+41713312 None:intergenic
GCAATTTGATTCTGAATTTC+AGG 0.181621 2_4:+41710917 None:intergenic
TTAGCTATAAAAGGAAAATT+TGG 0.217455 2_4:+41714797 None:intergenic
ATTTGAAGATGAACCTATAT+TGG 0.220192 2_4:-41712902 Msa0328840:CDS
ATACGTTCTTATCTTCATTT+TGG 0.245554 2_4:+41712833 None:intergenic
CTAATTTCCAACCATCAATT+TGG 0.253018 2_4:-41714600 Msa0328840:CDS
ATCATCAATGATGGTAATTA+AGG 0.253672 2_4:+41712023 None:intergenic
TTGTTTAGGTAATATATATT+AGG 0.277874 2_4:-41714880 Msa0328840:five_prime_UTR
GATTCCACATTCATTCAAAA+TGG 0.278555 2_4:-41711353 Msa0328840:CDS
TAATGAAATTAGGGACATAT+TGG 0.284373 2_4:-41713303 Msa0328840:CDS
TATACAAGTTATGCTTGTTT+AGG 0.291138 2_4:-41714894 None:intergenic
GTAAAGCCATTAGCTATAAA+AGG 0.300976 2_4:+41714788 None:intergenic
TTGAGTTGTGCGATGGAAAT+TGG 0.303929 2_4:+41714681 None:intergenic
ATCATTAAGTAGTGAATATA+AGG 0.309945 2_4:-41714560 Msa0328840:intron
TTTCGTAAATATTTAAAATC+TGG 0.312383 2_4:+41712066 None:intergenic
GATTCTGAATTTCAGGATCT+TGG 0.336257 2_4:+41710924 None:intergenic
TCAATGCAAGGTATCATATA+AGG 0.340753 2_4:-41714662 Msa0328840:CDS
CAATGCTACATGAATGAAAC+TGG 0.341142 2_4:-41711118 Msa0328840:CDS
ATGTATACTTAAGGTCTTCT+TGG 0.346794 2_4:+41712653 None:intergenic
TTTCGTAGGGTTTCATTCTC+AGG 0.348864 2_4:+41710786 None:intergenic
TCTCTTGCTTCATCCAATAT+AGG 0.348986 2_4:+41712889 None:intergenic
ATTTGGTTTGTTCTCTTCGT+TGG 0.357582 2_4:+41714814 None:intergenic
CTAATGGCTTTACCTATGAT+TGG 0.363161 2_4:-41714778 Msa0328840:CDS
GATTGGTTGAGAACTTTGTT+TGG 0.376926 2_4:-41712110 Msa0328840:CDS
ACTTCAAATAAGTCATGCTT+TGG 0.381812 2_4:-41712809 Msa0328840:CDS
TTTGGAACATCCACTGCATT+GGG 0.391831 2_4:-41712791 Msa0328840:CDS
ATGCTTTGCAAGGGATAGAT+TGG 0.394984 2_4:-41712127 Msa0328840:CDS
TAAGCATGAGTAAGTATAGT+AGG 0.415253 2_4:+41711382 None:intergenic
GAAATTTGTAATTTCAAGAA+AGG 0.419193 2_4:-41712979 Msa0328840:CDS
CTAGAAAGAGTTCCAATCAT+AGG 0.420371 2_4:+41714766 None:intergenic
TTTGTAATTTCAAGAAAGGT+AGG 0.421777 2_4:-41712975 Msa0328840:CDS
TTTGGTTTGTTCTCTTCGTT+GGG 0.422651 2_4:+41714815 None:intergenic
GATTGGAACTCTTTCTAGCT+TGG 0.425228 2_4:-41714761 Msa0328840:CDS
GCTTCCTCCTGTTGAAAAGA+AGG 0.427249 2_4:-41714728 Msa0328840:CDS
TCTTCACAAAAGCAGTTGAT+AGG 0.429846 2_4:-41711963 Msa0328840:intron
TTTCAGGATCTTGGTTGGTA+TGG 0.431471 2_4:+41710933 None:intergenic
AGCACCTTGATGTATACTTA+AGG 0.432930 2_4:+41712644 None:intergenic
TGATCATAGGTCCAAATTGA+TGG 0.438502 2_4:+41714589 None:intergenic
GGTAGGTTTGTTGACGTTGA+GGG 0.440364 2_4:-41712958 Msa0328840:CDS
ATGTAGCATTGAATTGACTT+TGG 0.445177 2_4:+41711130 None:intergenic
TAATGATTGTATATGATCAT+AGG 0.449975 2_4:+41714576 None:intergenic
TGCTGAAAGTCTAATTATGT+TGG 0.450285 2_4:+41711303 None:intergenic
CTTTGGAACATCCACTGCAT+TGG 0.453996 2_4:-41712792 Msa0328840:CDS
TGCGGTAAATCTTGCTAGAA+TGG 0.458860 2_4:-41710984 Msa0328840:CDS
GAGTCCCTCGATGGGAGGCT+AGG 0.467693 2_4:-41712768 Msa0328840:CDS
AGGGTTCTACTGTAGCAATA+TGG 0.469057 2_4:-41714708 Msa0328840:CDS
AAGTATAGTAGGTGCACCTA+TGG 0.470676 2_4:+41711393 None:intergenic
TTTGTACATACAATAGGAAT+CGG 0.476951 2_4:+41710878 None:intergenic
GGCTTGGTGTGTATCCACTA+TGG 0.480255 2_4:+41711446 None:intergenic
CTGAATTTCAGGATCTTGGT+TGG 0.483854 2_4:+41710928 None:intergenic
ATTGATGTATTGCAAAGGCT+TGG 0.488943 2_4:-41713344 Msa0328840:CDS
TCTATGTATTCTCCAAGGCT+TGG 0.489111 2_4:+41711430 None:intergenic
AAGAATGATGCTTAACAAAA+CGG 0.497193 2_4:-41713393 Msa0328840:CDS
TTCATTCAAAATGGAAGACT+TGG 0.497580 2_4:-41711344 Msa0328840:CDS
GAGACAATTTATGCTTTGCA+AGG 0.504853 2_4:-41712137 Msa0328840:CDS
TGCATTGGGGAGTCCCTCGA+TGG 0.509350 2_4:-41712777 Msa0328840:CDS
CTTCCTCCTGTTGAAAAGAA+GGG 0.519768 2_4:-41714727 Msa0328840:CDS
AGGTAGGTTTGTTGACGTTG+AGG 0.522510 2_4:-41712959 Msa0328840:CDS
TTTATGTATCATCGTGGAGA+TGG 0.524795 2_4:-41710956 Msa0328840:CDS
GAGAACTTTGTTTGGACTGT+GGG 0.531644 2_4:-41712102 Msa0328840:CDS
AGTGGATACACACCAAGCCT+TGG 0.533055 2_4:-41711442 Msa0328840:CDS
CATATTTGATTGAAGCAAAG+TGG 0.534124 2_4:-41711471 Msa0328840:CDS
CATGGTTATGATATATCACC+AGG 0.538113 2_4:-41713200 Msa0328840:intron
GAGAATACATAGAGAATGCA+TGG 0.541704 2_4:-41711420 Msa0328840:CDS
AACTGGAGCTTCTGAAGTTG+AGG 0.542366 2_4:-41711101 Msa0328840:CDS
AAACATGTTTATTAGTTCAG+TGG 0.543270 2_4:-41710811 Msa0328840:three_prime_UTR
CTTCCACTCTATAAACATCA+TGG 0.551044 2_4:+41711060 None:intergenic
TGGTGGAAAAGAACTAAACT+TGG 0.552083 2_4:-41712159 Msa0328840:CDS
ATCGTACACATCATCAATGA+TGG 0.554157 2_4:+41712014 None:intergenic
CATAGGTCCAAATTGATGGT+TGG 0.559161 2_4:+41714593 None:intergenic
TTACGCCTTGCTAATGACCT+CGG 0.563093 2_4:-41711274 Msa0328840:CDS
GATGATGTGTACGATGTGTA+TGG 0.566503 2_4:-41712006 Msa0328840:CDS
TTCAGACTCTTGAGGCAACA+TGG 0.576372 2_4:-41713218 Msa0328840:CDS
AGTCCATGATGTTTATAGAG+TGG 0.576983 2_4:-41711063 Msa0328840:CDS
AGACAATTTATGCTTTGCAA+GGG 0.578399 2_4:-41712136 Msa0328840:CDS
CATTCTCTATGTATTCTCCA+AGG 0.581762 2_4:+41711425 None:intergenic
TAGATGGGATCTAAATGCCA+TGG 0.583752 2_4:-41711843 Msa0328840:CDS
GAGAATGCATGGATATCCAT+AGG 0.583758 2_4:-41711409 Msa0328840:CDS
GTAGTTTGGGAGAGAATCCA+TGG 0.590044 2_4:+41711826 None:intergenic
AACTTACTTTATATGTTCCG+AGG 0.590775 2_4:+41711257 None:intergenic
CCTTGCATTGAGTTGTGCGA+TGG 0.594872 2_4:+41714674 None:intergenic
ACCACCTAGCCTCCCATCGA+GGG 0.602909 2_4:+41712764 None:intergenic
AGTTTATTGATGTATTGCAA+AGG 0.603533 2_4:-41713349 Msa0328840:CDS
GCATTGGGGAGTCCCTCGAT+GGG 0.605686 2_4:-41712776 Msa0328840:CDS
AAGTAATGTACACAAAGCAA+TGG 0.607124 2_4:-41713436 Msa0328840:CDS
CGAGGGACTCCCCAATGCAG+TGG 0.607874 2_4:+41712781 None:intergenic
ATGTTCCGAGGTCATTAGCA+AGG 0.610811 2_4:+41711269 None:intergenic
CCATCGCACAACTCAATGCA+AGG 0.612454 2_4:-41714674 Msa0328840:CDS
TTTACGAAAAGTTATGACAA+AGG 0.613165 2_4:-41712052 Msa0328840:CDS
GAAGCAAAGTGGTACCATAG+TGG 0.615723 2_4:-41711460 Msa0328840:CDS
TTGGGGAGTCCCTCGATGGG+AGG 0.619853 2_4:-41712773 Msa0328840:CDS
AAGACCTTAAGTATACATCA+AGG 0.621822 2_4:-41712648 Msa0328840:intron
TCCCTCGATGGGAGGCTAGG+TGG 0.625455 2_4:-41712765 Msa0328840:CDS
TGAGAACTTTGTTTGGACTG+TGG 0.632658 2_4:-41712103 Msa0328840:CDS
TTGGAACATCCACTGCATTG+GGG 0.645337 2_4:-41712790 Msa0328840:CDS
CACTTGAGTTCAGACTCTTG+AGG 0.649831 2_4:-41713226 Msa0328840:CDS
TCAATATTTCATAGATACTG+CGG 0.658525 2_4:-41711002 Msa0328840:CDS
AACCACCTAGCCTCCCATCG+AGG 0.678896 2_4:+41712763 None:intergenic
GCATTGTTTATGTATCATCG+TGG 0.679800 2_4:-41710962 Msa0328840:CDS
GTACGATGTGTATGGCACAT+TGG 0.688383 2_4:-41711998 Msa0328840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATAATAATTTTTATTA+TGG + chr2_4:41713168-41713187 None:intergenic 0.0%
!!! TAAAATAATAATTTTTATTA+TGG + chr2_4:41713168-41713187 None:intergenic 0.0%
!! TTACATTAAAAAAATTCATA+TGG - chr2_4:41711391-41711410 Msa0328840:CDS 10.0%
!!! TAAAAAAATCTTTTCAAAAA+TGG - chr2_4:41711477-41711496 Msa0328840:CDS 10.0%
!! CAAAAAATTACTTAAAAATA+GGG + chr2_4:41711763-41711782 None:intergenic 10.0%
!! ACAAAAAATTACTTAAAAAT+AGG + chr2_4:41711764-41711783 None:intergenic 10.0%
!!! AAAAATTCTAATTGTTTTTT+TGG - chr2_4:41711930-41711949 Msa0328840:intron 10.0%
!!! AAAATTCTAATTGTTTTTTT+GGG - chr2_4:41711931-41711950 Msa0328840:intron 10.0%
!!! TACAAATTAACAATAATTTT+CGG + chr2_4:41712621-41712640 None:intergenic 10.0%
!! TTACATTAAAAAAATTCATA+TGG - chr2_4:41711391-41711410 Msa0328840:CDS 10.0%
!!! TAAAAAAATCTTTTCAAAAA+TGG - chr2_4:41711477-41711496 Msa0328840:CDS 10.0%
!! CAAAAAATTACTTAAAAATA+GGG + chr2_4:41711763-41711782 None:intergenic 10.0%
!! ACAAAAAATTACTTAAAAAT+AGG + chr2_4:41711764-41711783 None:intergenic 10.0%
!!! AAAAATTCTAATTGTTTTTT+TGG - chr2_4:41711930-41711949 Msa0328840:intron 10.0%
!!! AAAATTCTAATTGTTTTTTT+GGG - chr2_4:41711931-41711950 Msa0328840:intron 10.0%
!!! TACAAATTAACAATAATTTT+CGG + chr2_4:41712621-41712640 None:intergenic 10.0%
!! TTGTTTAGGTAATATATATT+AGG - chr2_4:41710796-41710815 Msa0328840:three_prime_UTR 15.0%
!! CAATCTTTCAAAAATATATT+AGG - chr2_4:41710826-41710845 Msa0328840:three_prime_UTR 15.0%
!! ATATGCATTTACTTAATAAT+AGG + chr2_4:41711245-41711264 None:intergenic 15.0%
!!! AATTTTGAGATAATTTTCTT+AGG + chr2_4:41711317-41711336 None:intergenic 15.0%
!!! TTAAGAAATTATTTTTGTGT+GGG - chr2_4:41711427-41711446 Msa0328840:CDS 15.0%
!!! TAAAAAGTATGATTTTTATG+TGG - chr2_4:41711567-41711586 Msa0328840:intron 15.0%
!!! ATGAAAAACAATATTTTGTA+AGG - chr2_4:41711590-41711609 Msa0328840:intron 15.0%
!!! CATTTATCAATTTTTTTTCT+GGG - chr2_4:41711629-41711648 Msa0328840:intron 15.0%
!! AAAAAATTGGTATATCTATA+GGG + chr2_4:41711672-41711691 None:intergenic 15.0%
!!! ATGAATTTTTATATTTTTGG+CGG + chr2_4:41711890-41711909 None:intergenic 15.0%
!! TAAATATGAGTTTACTTTAA+AGG - chr2_4:41712012-41712031 Msa0328840:CDS 15.0%
!! GAAAATTTGACATATTTATA+GGG - chr2_4:41712106-41712125 Msa0328840:CDS 15.0%
!! AAAATTTGACATATTTATAG+GGG - chr2_4:41712107-41712126 Msa0328840:CDS 15.0%
!!! ACCATTTTAATAATGAAATT+AGG - chr2_4:41712363-41712382 Msa0328840:intron 15.0%
!!! CCATTTTAATAATGAAATTA+GGG - chr2_4:41712364-41712383 Msa0328840:intron 15.0%
!!! TATAAAAATCTACTTTTTAC+TGG + chr2_4:41713214-41713233 None:intergenic 15.0%
!!! TTTCGTAAATATTTAAAATC+TGG + chr2_4:41713613-41713632 None:intergenic 15.0%
!! ATTGTAATCATTATTATTAG+TGG - chr2_4:41714003-41714022 Msa0328840:intron 15.0%
!! TTGTAATCATTATTATTAGT+GGG - chr2_4:41714004-41714023 Msa0328840:intron 15.0%
!! AACAATTAGTGAAAAATTTA+AGG + chr2_4:41714483-41714502 None:intergenic 15.0%
!! TTGTTTAGGTAATATATATT+AGG - chr2_4:41710796-41710815 Msa0328840:three_prime_UTR 15.0%
!! CAATCTTTCAAAAATATATT+AGG - chr2_4:41710826-41710845 Msa0328840:three_prime_UTR 15.0%
!! ATATGCATTTACTTAATAAT+AGG + chr2_4:41711245-41711264 None:intergenic 15.0%
!!! AATTTTGAGATAATTTTCTT+AGG + chr2_4:41711317-41711336 None:intergenic 15.0%
!!! TTAAGAAATTATTTTTGTGT+GGG - chr2_4:41711427-41711446 Msa0328840:CDS 15.0%
!!! TAAAAAGTATGATTTTTATG+TGG - chr2_4:41711567-41711586 Msa0328840:intron 15.0%
!!! ATGAAAAACAATATTTTGTA+AGG - chr2_4:41711590-41711609 Msa0328840:intron 15.0%
!!! CATTTATCAATTTTTTTTCT+GGG - chr2_4:41711629-41711648 Msa0328840:intron 15.0%
!! AAAAAATTGGTATATCTATA+GGG + chr2_4:41711672-41711691 None:intergenic 15.0%
!!! ATGAATTTTTATATTTTTGG+CGG + chr2_4:41711890-41711909 None:intergenic 15.0%
!! TAAATATGAGTTTACTTTAA+AGG - chr2_4:41712012-41712031 Msa0328840:CDS 15.0%
!! GAAAATTTGACATATTTATA+GGG - chr2_4:41712106-41712125 Msa0328840:CDS 15.0%
!! AAAATTTGACATATTTATAG+GGG - chr2_4:41712107-41712126 Msa0328840:CDS 15.0%
!!! ACCATTTTAATAATGAAATT+AGG - chr2_4:41712363-41712382 Msa0328840:intron 15.0%
!!! CCATTTTAATAATGAAATTA+GGG - chr2_4:41712364-41712383 Msa0328840:intron 15.0%
!!! TATAAAAATCTACTTTTTAC+TGG + chr2_4:41713214-41713233 None:intergenic 15.0%
!!! TTTCGTAAATATTTAAAATC+TGG + chr2_4:41713613-41713632 None:intergenic 15.0%
!! ATTGTAATCATTATTATTAG+TGG - chr2_4:41714003-41714022 Msa0328840:intron 15.0%
!! TTGTAATCATTATTATTAGT+GGG - chr2_4:41714004-41714023 Msa0328840:intron 15.0%
!! AACAATTAGTGAAAAATTTA+AGG + chr2_4:41714483-41714502 None:intergenic 15.0%
!! TTAGCTATAAAAGGAAAATT+TGG + chr2_4:41710882-41710901 None:intergenic 20.0%
!!! AATTTTCCTTTTATAGCTAA+TGG - chr2_4:41710882-41710901 Msa0328840:CDS 20.0%
!! TAATGATTGTATATGATCAT+AGG + chr2_4:41711103-41711122 None:intergenic 20.0%
!! ATCATTAAGTAGTGAATATA+AGG - chr2_4:41711116-41711135 Msa0328840:CDS 20.0%
!!! GCATAATAATTTTTTAGAAC+TGG + chr2_4:41711208-41711227 None:intergenic 20.0%
!! AGATAACAGTAACAAAAATA+TGG + chr2_4:41711363-41711382 None:intergenic 20.0%
!!! CTTAAGAAATTATTTTTGTG+TGG - chr2_4:41711426-41711445 Msa0328840:CDS 20.0%
!!! TAAGAAATTATTTTTGTGTG+GGG - chr2_4:41711428-41711447 Msa0328840:CDS 20.0%
!!! AAAATCTTTTCAAAAATGGA+AGG - chr2_4:41711481-41711500 Msa0328840:CDS 20.0%
!! CCAGAAAAAAAATTGATAAA+TGG + chr2_4:41711631-41711650 None:intergenic 20.0%
!!! CCATTTATCAATTTTTTTTC+TGG - chr2_4:41711628-41711647 Msa0328840:intron 20.0%
!!! TTCTGGGTTAAATATATTTT+TGG - chr2_4:41711645-41711664 Msa0328840:intron 20.0%
!! CAAAAAATTGGTATATCTAT+AGG + chr2_4:41711673-41711692 None:intergenic 20.0%
!!! TAGTGATTGAAAATTTTGTA+GGG + chr2_4:41711732-41711751 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr2_4:41711736-41711755 Msa0328840:CDS 20.0%
!!! AAGTGTAGATAAAAAACTTT+TGG - chr2_4:41712044-41712063 Msa0328840:CDS 20.0%
!!! AGTGTAGATAAAAAACTTTT+GGG - chr2_4:41712045-41712064 Msa0328840:CDS 20.0%
!! CGAAAATTTGACATATTTAT+AGG - chr2_4:41712105-41712124 Msa0328840:CDS 20.0%
!!! TAAAGGGTTAAATATGTTTT+TGG + chr2_4:41712133-41712152 None:intergenic 20.0%
!! GTATGTGAGTAAAAAATAAA+GGG + chr2_4:41712149-41712168 None:intergenic 20.0%
!! TGTATGTGAGTAAAAAATAA+AGG + chr2_4:41712150-41712169 None:intergenic 20.0%
!! CCCTAATTTCATTATTAAAA+TGG + chr2_4:41712367-41712386 None:intergenic 20.0%
!!! TAATATATGCTTCCAAATTT+TGG + chr2_4:41712596-41712615 None:intergenic 20.0%
!! GAAATTTGTAATTTCAAGAA+AGG - chr2_4:41712697-41712716 Msa0328840:CDS 20.0%
!!! TTTACTTGAATTTGCTAAAT+TGG - chr2_4:41712975-41712994 Msa0328840:CDS 20.0%
!!! TTCTAAAATTCGATAACAAA+TGG - chr2_4:41713272-41713291 Msa0328840:CDS 20.0%
!! CAATAAAATTAAGCATTAGT+CGG + chr2_4:41713483-41713502 None:intergenic 20.0%
!!! GACTAATGCTTAATTTTATT+GGG - chr2_4:41713482-41713501 Msa0328840:intron 20.0%
!!! AGAAAACTTTTCAAATAAAG+TGG + chr2_4:41713773-41713792 None:intergenic 20.0%
!!! TAATGTTTTGTACATACAAT+AGG + chr2_4:41714807-41714826 None:intergenic 20.0%
!! TTAGCTATAAAAGGAAAATT+TGG + chr2_4:41710882-41710901 None:intergenic 20.0%
!!! AATTTTCCTTTTATAGCTAA+TGG - chr2_4:41710882-41710901 Msa0328840:CDS 20.0%
!! TAATGATTGTATATGATCAT+AGG + chr2_4:41711103-41711122 None:intergenic 20.0%
!! ATCATTAAGTAGTGAATATA+AGG - chr2_4:41711116-41711135 Msa0328840:CDS 20.0%
!!! GCATAATAATTTTTTAGAAC+TGG + chr2_4:41711208-41711227 None:intergenic 20.0%
!! AGATAACAGTAACAAAAATA+TGG + chr2_4:41711363-41711382 None:intergenic 20.0%
!!! CTTAAGAAATTATTTTTGTG+TGG - chr2_4:41711426-41711445 Msa0328840:CDS 20.0%
!!! TAAGAAATTATTTTTGTGTG+GGG - chr2_4:41711428-41711447 Msa0328840:CDS 20.0%
!!! AAAATCTTTTCAAAAATGGA+AGG - chr2_4:41711481-41711500 Msa0328840:CDS 20.0%
!! CCAGAAAAAAAATTGATAAA+TGG + chr2_4:41711631-41711650 None:intergenic 20.0%
!!! CCATTTATCAATTTTTTTTC+TGG - chr2_4:41711628-41711647 Msa0328840:intron 20.0%
!!! TTCTGGGTTAAATATATTTT+TGG - chr2_4:41711645-41711664 Msa0328840:intron 20.0%
!! CAAAAAATTGGTATATCTAT+AGG + chr2_4:41711673-41711692 None:intergenic 20.0%
!!! TAGTGATTGAAAATTTTGTA+GGG + chr2_4:41711732-41711751 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr2_4:41711736-41711755 Msa0328840:CDS 20.0%
!!! AAGTGTAGATAAAAAACTTT+TGG - chr2_4:41712044-41712063 Msa0328840:CDS 20.0%
!!! AGTGTAGATAAAAAACTTTT+GGG - chr2_4:41712045-41712064 Msa0328840:CDS 20.0%
!! CGAAAATTTGACATATTTAT+AGG - chr2_4:41712105-41712124 Msa0328840:CDS 20.0%
!!! TAAAGGGTTAAATATGTTTT+TGG + chr2_4:41712133-41712152 None:intergenic 20.0%
!! GTATGTGAGTAAAAAATAAA+GGG + chr2_4:41712149-41712168 None:intergenic 20.0%
!! TGTATGTGAGTAAAAAATAA+AGG + chr2_4:41712150-41712169 None:intergenic 20.0%
!! CCCTAATTTCATTATTAAAA+TGG + chr2_4:41712367-41712386 None:intergenic 20.0%
!!! TAATATATGCTTCCAAATTT+TGG + chr2_4:41712596-41712615 None:intergenic 20.0%
!! GAAATTTGTAATTTCAAGAA+AGG - chr2_4:41712697-41712716 Msa0328840:CDS 20.0%
!!! TTTACTTGAATTTGCTAAAT+TGG - chr2_4:41712975-41712994 Msa0328840:CDS 20.0%
!!! TTCTAAAATTCGATAACAAA+TGG - chr2_4:41713272-41713291 Msa0328840:CDS 20.0%
!! CAATAAAATTAAGCATTAGT+CGG + chr2_4:41713483-41713502 None:intergenic 20.0%
!!! GACTAATGCTTAATTTTATT+GGG - chr2_4:41713482-41713501 Msa0328840:intron 20.0%
!!! AGAAAACTTTTCAAATAAAG+TGG + chr2_4:41713773-41713792 None:intergenic 20.0%
!!! TAATGTTTTGTACATACAAT+AGG + chr2_4:41714807-41714826 None:intergenic 20.0%
!! TTCTTTGCACTTTTATCTTA+GGG - chr2_4:41711167-41711186 Msa0328840:intron 25.0%
!!! TTTGAGATAATTTTCTTAGG+AGG + chr2_4:41711314-41711333 None:intergenic 25.0%
!! AAACACGATTTGTTTCAATA+GGG - chr2_4:41711510-41711529 Msa0328840:intron 25.0%
! TAGGGATTAAAACTGTTTAT+AGG - chr2_4:41711528-41711547 Msa0328840:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr2_4:41711703-41711722 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr2_4:41711704-41711723 None:intergenic 25.0%
!! GTAGTGATTGAAAATTTTGT+AGG + chr2_4:41711733-41711752 None:intergenic 25.0%
!!! AAGTTTTTTATCTACACTTC+TGG + chr2_4:41712043-41712062 None:intergenic 25.0%
!! GTGTAGATAAAAAACTTTTG+GGG - chr2_4:41712046-41712065 Msa0328840:CDS 25.0%
!! TGTAGATAAAAAACTTTTGG+GGG - chr2_4:41712047-41712066 Msa0328840:CDS 25.0%
!! AAAGTGAAGAAAACTTTTAG+AGG - chr2_4:41712074-41712093 Msa0328840:CDS 25.0%
!! AAGTGAAGAAAACTTTTAGA+GGG - chr2_4:41712075-41712094 Msa0328840:CDS 25.0%
!! AAAGCAATGGACAATTTTAA+AGG - chr2_4:41712253-41712272 Msa0328840:intron 25.0%
! AAGAATGATGCTTAACAAAA+CGG - chr2_4:41712283-41712302 Msa0328840:intron 25.0%
! AGTTTATTGATGTATTGCAA+AGG - chr2_4:41712327-41712346 Msa0328840:intron 25.0%
! TAATGAAATTAGGGACATAT+TGG - chr2_4:41712373-41712392 Msa0328840:intron 25.0%
! TTCTTATATATTCAATGACC+TGG + chr2_4:41712497-41712516 None:intergenic 25.0%
!! GATTTTTGATATCTTTACGA+CGG - chr2_4:41712552-41712571 Msa0328840:intron 25.0%
! TTTGTAATTTCAAGAAAGGT+AGG - chr2_4:41712701-41712720 Msa0328840:CDS 25.0%
! ATTTGAAGATGAACCTATAT+TGG - chr2_4:41712774-41712793 Msa0328840:CDS 25.0%
!! ATACGTTCTTATCTTCATTT+TGG + chr2_4:41712846-41712865 None:intergenic 25.0%
! TGAACATGTAATGTTTATCA+AGG + chr2_4:41713079-41713098 None:intergenic 25.0%
! CAAATGGAAAAACATTTCTA+AGG - chr2_4:41713288-41713307 Msa0328840:CDS 25.0%
!! CGACTAATGCTTAATTTTAT+TGG - chr2_4:41713481-41713500 Msa0328840:intron 25.0%
! TTATTGGGTATATTTGAAGA+TGG - chr2_4:41713497-41713516 Msa0328840:intron 25.0%
! TTTACGAAAAGTTATGACAA+AGG - chr2_4:41713624-41713643 Msa0328840:intron 25.0%
! ATCATCAATGATGGTAATTA+AGG + chr2_4:41713656-41713675 None:intergenic 25.0%
!! AAACTTTTCAAATAAAGTGG+AGG + chr2_4:41713770-41713789 None:intergenic 25.0%
!!! ATTTTGTTGATGATTCTAGA+TGG - chr2_4:41713817-41713836 Msa0328840:intron 25.0%
!!! TTTTGTTGATGATTCTAGAT+GGG - chr2_4:41713818-41713837 Msa0328840:intron 25.0%
!! AGCATATTTTCATGTAGTTT+GGG + chr2_4:41713866-41713885 None:intergenic 25.0%
!! AAGCATATTTTCATGTAGTT+TGG + chr2_4:41713867-41713886 None:intergenic 25.0%
!! TTTGAAACTTTGAAAAAGTG+TGG - chr2_4:41713921-41713940 Msa0328840:intron 25.0%
! TCAATATTTCATAGATACTG+CGG - chr2_4:41714674-41714693 Msa0328840:CDS 25.0%
! TTTGTACATACAATAGGAAT+CGG + chr2_4:41714801-41714820 None:intergenic 25.0%
! AAACATGTTTATTAGTTCAG+TGG - chr2_4:41714865-41714884 Msa0328840:five_prime_UTR 25.0%
!! TTCTTTGCACTTTTATCTTA+GGG - chr2_4:41711167-41711186 Msa0328840:intron 25.0%
!!! TTTGAGATAATTTTCTTAGG+AGG + chr2_4:41711314-41711333 None:intergenic 25.0%
!! AAACACGATTTGTTTCAATA+GGG - chr2_4:41711510-41711529 Msa0328840:intron 25.0%
! TAGGGATTAAAACTGTTTAT+AGG - chr2_4:41711528-41711547 Msa0328840:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr2_4:41711703-41711722 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr2_4:41711704-41711723 None:intergenic 25.0%
!! GTAGTGATTGAAAATTTTGT+AGG + chr2_4:41711733-41711752 None:intergenic 25.0%
!!! AAGTTTTTTATCTACACTTC+TGG + chr2_4:41712043-41712062 None:intergenic 25.0%
!! GTGTAGATAAAAAACTTTTG+GGG - chr2_4:41712046-41712065 Msa0328840:CDS 25.0%
!! TGTAGATAAAAAACTTTTGG+GGG - chr2_4:41712047-41712066 Msa0328840:CDS 25.0%
!! AAAGTGAAGAAAACTTTTAG+AGG - chr2_4:41712074-41712093 Msa0328840:CDS 25.0%
!! AAGTGAAGAAAACTTTTAGA+GGG - chr2_4:41712075-41712094 Msa0328840:CDS 25.0%
!! AAAGCAATGGACAATTTTAA+AGG - chr2_4:41712253-41712272 Msa0328840:intron 25.0%
! AAGAATGATGCTTAACAAAA+CGG - chr2_4:41712283-41712302 Msa0328840:intron 25.0%
! AGTTTATTGATGTATTGCAA+AGG - chr2_4:41712327-41712346 Msa0328840:intron 25.0%
! TAATGAAATTAGGGACATAT+TGG - chr2_4:41712373-41712392 Msa0328840:intron 25.0%
! TTCTTATATATTCAATGACC+TGG + chr2_4:41712497-41712516 None:intergenic 25.0%
!! GATTTTTGATATCTTTACGA+CGG - chr2_4:41712552-41712571 Msa0328840:intron 25.0%
! TTTGTAATTTCAAGAAAGGT+AGG - chr2_4:41712701-41712720 Msa0328840:CDS 25.0%
! ATTTGAAGATGAACCTATAT+TGG - chr2_4:41712774-41712793 Msa0328840:CDS 25.0%
!! ATACGTTCTTATCTTCATTT+TGG + chr2_4:41712846-41712865 None:intergenic 25.0%
! TGAACATGTAATGTTTATCA+AGG + chr2_4:41713079-41713098 None:intergenic 25.0%
! CAAATGGAAAAACATTTCTA+AGG - chr2_4:41713288-41713307 Msa0328840:CDS 25.0%
!! CGACTAATGCTTAATTTTAT+TGG - chr2_4:41713481-41713500 Msa0328840:intron 25.0%
! TTATTGGGTATATTTGAAGA+TGG - chr2_4:41713497-41713516 Msa0328840:intron 25.0%
! TTTACGAAAAGTTATGACAA+AGG - chr2_4:41713624-41713643 Msa0328840:intron 25.0%
! ATCATCAATGATGGTAATTA+AGG + chr2_4:41713656-41713675 None:intergenic 25.0%
!! AAACTTTTCAAATAAAGTGG+AGG + chr2_4:41713770-41713789 None:intergenic 25.0%
!!! ATTTTGTTGATGATTCTAGA+TGG - chr2_4:41713817-41713836 Msa0328840:intron 25.0%
!!! TTTTGTTGATGATTCTAGAT+GGG - chr2_4:41713818-41713837 Msa0328840:intron 25.0%
!! AGCATATTTTCATGTAGTTT+GGG + chr2_4:41713866-41713885 None:intergenic 25.0%
!! AAGCATATTTTCATGTAGTT+TGG + chr2_4:41713867-41713886 None:intergenic 25.0%
!! TTTGAAACTTTGAAAAAGTG+TGG - chr2_4:41713921-41713940 Msa0328840:intron 25.0%
! TCAATATTTCATAGATACTG+CGG - chr2_4:41714674-41714693 Msa0328840:CDS 25.0%
! TTTGTACATACAATAGGAAT+CGG + chr2_4:41714801-41714820 None:intergenic 25.0%
! AAACATGTTTATTAGTTCAG+TGG - chr2_4:41714865-41714884 Msa0328840:five_prime_UTR 25.0%
GTAAAGCCATTAGCTATAAA+AGG + chr2_4:41710891-41710910 None:intergenic 30.0%
! TCAATGCAAGGTATCATATA+AGG - chr2_4:41711014-41711033 Msa0328840:CDS 30.0%
CTAATTTCCAACCATCAATT+TGG - chr2_4:41711076-41711095 Msa0328840:CDS 30.0%
! CTTCTTTGCACTTTTATCTT+AGG - chr2_4:41711166-41711185 Msa0328840:intron 30.0%
! CAAACACGATTTGTTTCAAT+AGG - chr2_4:41711509-41711528 Msa0328840:intron 30.0%
GAGGGACTAAAACAAAAAAT+TGG + chr2_4:41711685-41711704 None:intergenic 30.0%
TAACACCATCTACTTAATTC+AGG - chr2_4:41712217-41712236 Msa0328840:intron 30.0%
TACTTCCTGAATTAAGTAGA+TGG + chr2_4:41712225-41712244 None:intergenic 30.0%
AAGTAATGTACACAAAGCAA+TGG - chr2_4:41712240-41712259 Msa0328840:intron 30.0%
AGGTTGAATAGACCAAAATT+TGG - chr2_4:41712581-41712600 Msa0328840:intron 30.0%
ACTTCAAATAAGTCATGCTT+TGG - chr2_4:41712867-41712886 Msa0328840:CDS 30.0%
ATGTATACTTAAGGTCTTCT+TGG + chr2_4:41713026-41713045 None:intergenic 30.0%
AAGACCTTAAGTATACATCA+AGG - chr2_4:41713028-41713047 Msa0328840:intron 30.0%
TAATTTAGTTGCTCACTTGT+AGG - chr2_4:41713428-41713447 Msa0328840:CDS 30.0%
AGACAATTTATGCTTTGCAA+GGG - chr2_4:41713540-41713559 Msa0328840:intron 30.0%
!!! TTTTTAGGTATGGAGTGATA+TGG + chr2_4:41713950-41713969 None:intergenic 30.0%
!!! TAATGCTTACCGCTTTTTTT+AGG + chr2_4:41713965-41713984 None:intergenic 30.0%
CATATTTGATTGAAGCAAAG+TGG - chr2_4:41714205-41714224 Msa0328840:intron 30.0%
TAAGCATGAGTAAGTATAGT+AGG + chr2_4:41714297-41714316 None:intergenic 30.0%
GATTCCACATTCATTCAAAA+TGG - chr2_4:41714323-41714342 Msa0328840:intron 30.0%
! TCTTCCATTTTGAATGAATG+TGG + chr2_4:41714330-41714349 None:intergenic 30.0%
TTCATTCAAAATGGAAGACT+TGG - chr2_4:41714332-41714351 Msa0328840:intron 30.0%
TGCTGAAAGTCTAATTATGT+TGG + chr2_4:41714376-41714395 None:intergenic 30.0%
AACTTACTTTATATGTTCCG+AGG + chr2_4:41714422-41714441 None:intergenic 30.0%
! GTTCTTTTTGCTTCTCTAAA+CGG - chr2_4:41714439-41714458 Msa0328840:intron 30.0%
!!! CTCTTTTTCACGCTTTAAAA+AGG + chr2_4:41714514-41714533 None:intergenic 30.0%
! TTTAAAGCGTGAAAAAGAGA+CGG - chr2_4:41714515-41714534 Msa0328840:intron 30.0%
! ATGTAGCATTGAATTGACTT+TGG + chr2_4:41714549-41714568 None:intergenic 30.0%
GCAATTTGATTCTGAATTTC+AGG + chr2_4:41714762-41714781 None:intergenic 30.0%
GTAAAGCCATTAGCTATAAA+AGG + chr2_4:41710891-41710910 None:intergenic 30.0%
! TCAATGCAAGGTATCATATA+AGG - chr2_4:41711014-41711033 Msa0328840:CDS 30.0%
CTAATTTCCAACCATCAATT+TGG - chr2_4:41711076-41711095 Msa0328840:CDS 30.0%
! CTTCTTTGCACTTTTATCTT+AGG - chr2_4:41711166-41711185 Msa0328840:intron 30.0%
! CAAACACGATTTGTTTCAAT+AGG - chr2_4:41711509-41711528 Msa0328840:intron 30.0%
GAGGGACTAAAACAAAAAAT+TGG + chr2_4:41711685-41711704 None:intergenic 30.0%
TAACACCATCTACTTAATTC+AGG - chr2_4:41712217-41712236 Msa0328840:intron 30.0%
TACTTCCTGAATTAAGTAGA+TGG + chr2_4:41712225-41712244 None:intergenic 30.0%
AAGTAATGTACACAAAGCAA+TGG - chr2_4:41712240-41712259 Msa0328840:intron 30.0%
AGGTTGAATAGACCAAAATT+TGG - chr2_4:41712581-41712600 Msa0328840:intron 30.0%
ACTTCAAATAAGTCATGCTT+TGG - chr2_4:41712867-41712886 Msa0328840:CDS 30.0%
ATGTATACTTAAGGTCTTCT+TGG + chr2_4:41713026-41713045 None:intergenic 30.0%
AAGACCTTAAGTATACATCA+AGG - chr2_4:41713028-41713047 Msa0328840:intron 30.0%
TAATTTAGTTGCTCACTTGT+AGG - chr2_4:41713428-41713447 Msa0328840:CDS 30.0%
AGACAATTTATGCTTTGCAA+GGG - chr2_4:41713540-41713559 Msa0328840:intron 30.0%
!!! TTTTTAGGTATGGAGTGATA+TGG + chr2_4:41713950-41713969 None:intergenic 30.0%
!!! TAATGCTTACCGCTTTTTTT+AGG + chr2_4:41713965-41713984 None:intergenic 30.0%
CATATTTGATTGAAGCAAAG+TGG - chr2_4:41714205-41714224 Msa0328840:intron 30.0%
TAAGCATGAGTAAGTATAGT+AGG + chr2_4:41714297-41714316 None:intergenic 30.0%
GATTCCACATTCATTCAAAA+TGG - chr2_4:41714323-41714342 Msa0328840:intron 30.0%
! TCTTCCATTTTGAATGAATG+TGG + chr2_4:41714330-41714349 None:intergenic 30.0%
TTCATTCAAAATGGAAGACT+TGG - chr2_4:41714332-41714351 Msa0328840:intron 30.0%
TGCTGAAAGTCTAATTATGT+TGG + chr2_4:41714376-41714395 None:intergenic 30.0%
AACTTACTTTATATGTTCCG+AGG + chr2_4:41714422-41714441 None:intergenic 30.0%
! GTTCTTTTTGCTTCTCTAAA+CGG - chr2_4:41714439-41714458 Msa0328840:intron 30.0%
!!! CTCTTTTTCACGCTTTAAAA+AGG + chr2_4:41714514-41714533 None:intergenic 30.0%
! TTTAAAGCGTGAAAAAGAGA+CGG - chr2_4:41714515-41714534 Msa0328840:intron 30.0%
! ATGTAGCATTGAATTGACTT+TGG + chr2_4:41714549-41714568 None:intergenic 30.0%
GCAATTTGATTCTGAATTTC+AGG + chr2_4:41714762-41714781 None:intergenic 30.0%
!! TTTGGTTTGTTCTCTTCGTT+GGG + chr2_4:41710864-41710883 None:intergenic 35.0%
!! ATTTGGTTTGTTCTCTTCGT+TGG + chr2_4:41710865-41710884 None:intergenic 35.0%
! CTAATGGCTTTACCTATGAT+TGG - chr2_4:41710898-41710917 Msa0328840:CDS 35.0%
CTAGAAAGAGTTCCAATCAT+AGG + chr2_4:41710913-41710932 None:intergenic 35.0%
!!! AACAGGAGGAAGCATTTTTT+TGG + chr2_4:41710941-41710960 None:intergenic 35.0%
TGATCATAGGTCCAAATTGA+TGG + chr2_4:41711090-41711109 None:intergenic 35.0%
TTGTAGGGACTAAAAGTTGA+AGG + chr2_4:41711717-41711736 None:intergenic 35.0%
ATTGATGTATTGCAAAGGCT+TGG - chr2_4:41712332-41712351 Msa0328840:intron 35.0%
CATGGTTATGATATATCACC+AGG - chr2_4:41712476-41712495 Msa0328840:intron 35.0%
TTGCGACTTAATGATAGTTG+TGG + chr2_4:41712526-41712545 None:intergenic 35.0%
TCTCTTGCTTCATCCAATAT+AGG + chr2_4:41712790-41712809 None:intergenic 35.0%
AGCACCTTGATGTATACTTA+AGG + chr2_4:41713035-41713054 None:intergenic 35.0%
AAGGAACTGATACTTGAAGT+TGG + chr2_4:41713060-41713079 None:intergenic 35.0%
AACATTACATGTTCACGTTG+TGG - chr2_4:41713084-41713103 Msa0328840:intron 35.0%
TTGGGTATATTTGAAGATGG+TGG - chr2_4:41713500-41713519 Msa0328840:intron 35.0%
TGGTGGAAAAGAACTAAACT+TGG - chr2_4:41713517-41713536 Msa0328840:intron 35.0%
GAGACAATTTATGCTTTGCA+AGG - chr2_4:41713539-41713558 Msa0328840:intron 35.0%
! GATTGGTTGAGAACTTTGTT+TGG - chr2_4:41713566-41713585 Msa0328840:intron 35.0%
ATCGTACACATCATCAATGA+TGG + chr2_4:41713665-41713684 None:intergenic 35.0%
TCTTCACAAAAGCAGTTGAT+AGG - chr2_4:41713713-41713732 Msa0328840:intron 35.0%
CACTCCATACCTAAAAAAAG+CGG - chr2_4:41713953-41713972 Msa0328840:intron 35.0%
!!! CTTACCGCTTTTTTTAGGTA+TGG + chr2_4:41713960-41713979 None:intergenic 35.0%
CATTCTCTATGTATTCTCCA+AGG + chr2_4:41714254-41714273 None:intergenic 35.0%
GAGAATACATAGAGAATGCA+TGG - chr2_4:41714256-41714275 Msa0328840:intron 35.0%
TTAAAGCGTGAAAAAGAGAC+GGG - chr2_4:41714516-41714535 Msa0328840:intron 35.0%
CAATGCTACATGAATGAAAC+TGG - chr2_4:41714558-41714577 Msa0328840:intron 35.0%
AGTCCATGATGTTTATAGAG+TGG - chr2_4:41714613-41714632 Msa0328840:CDS 35.0%
CTTCCACTCTATAAACATCA+TGG + chr2_4:41714619-41714638 None:intergenic 35.0%
GCATTGTTTATGTATCATCG+TGG - chr2_4:41714714-41714733 Msa0328840:CDS 35.0%
TTTATGTATCATCGTGGAGA+TGG - chr2_4:41714720-41714739 Msa0328840:CDS 35.0%
GATTCTGAATTTCAGGATCT+TGG + chr2_4:41714755-41714774 None:intergenic 35.0%
!! TTTGGTTTGTTCTCTTCGTT+GGG + chr2_4:41710864-41710883 None:intergenic 35.0%
!! ATTTGGTTTGTTCTCTTCGT+TGG + chr2_4:41710865-41710884 None:intergenic 35.0%
! CTAATGGCTTTACCTATGAT+TGG - chr2_4:41710898-41710917 Msa0328840:CDS 35.0%
CTAGAAAGAGTTCCAATCAT+AGG + chr2_4:41710913-41710932 None:intergenic 35.0%
!!! AACAGGAGGAAGCATTTTTT+TGG + chr2_4:41710941-41710960 None:intergenic 35.0%
TGATCATAGGTCCAAATTGA+TGG + chr2_4:41711090-41711109 None:intergenic 35.0%
TTGTAGGGACTAAAAGTTGA+AGG + chr2_4:41711717-41711736 None:intergenic 35.0%
ATTGATGTATTGCAAAGGCT+TGG - chr2_4:41712332-41712351 Msa0328840:intron 35.0%
CATGGTTATGATATATCACC+AGG - chr2_4:41712476-41712495 Msa0328840:intron 35.0%
TTGCGACTTAATGATAGTTG+TGG + chr2_4:41712526-41712545 None:intergenic 35.0%
TCTCTTGCTTCATCCAATAT+AGG + chr2_4:41712790-41712809 None:intergenic 35.0%
AGCACCTTGATGTATACTTA+AGG + chr2_4:41713035-41713054 None:intergenic 35.0%
AAGGAACTGATACTTGAAGT+TGG + chr2_4:41713060-41713079 None:intergenic 35.0%
AACATTACATGTTCACGTTG+TGG - chr2_4:41713084-41713103 Msa0328840:intron 35.0%
TTGGGTATATTTGAAGATGG+TGG - chr2_4:41713500-41713519 Msa0328840:intron 35.0%
TGGTGGAAAAGAACTAAACT+TGG - chr2_4:41713517-41713536 Msa0328840:intron 35.0%
GAGACAATTTATGCTTTGCA+AGG - chr2_4:41713539-41713558 Msa0328840:intron 35.0%
! GATTGGTTGAGAACTTTGTT+TGG - chr2_4:41713566-41713585 Msa0328840:intron 35.0%
ATCGTACACATCATCAATGA+TGG + chr2_4:41713665-41713684 None:intergenic 35.0%
TCTTCACAAAAGCAGTTGAT+AGG - chr2_4:41713713-41713732 Msa0328840:intron 35.0%
CACTCCATACCTAAAAAAAG+CGG - chr2_4:41713953-41713972 Msa0328840:intron 35.0%
!!! CTTACCGCTTTTTTTAGGTA+TGG + chr2_4:41713960-41713979 None:intergenic 35.0%
CATTCTCTATGTATTCTCCA+AGG + chr2_4:41714254-41714273 None:intergenic 35.0%
GAGAATACATAGAGAATGCA+TGG - chr2_4:41714256-41714275 Msa0328840:intron 35.0%
TTAAAGCGTGAAAAAGAGAC+GGG - chr2_4:41714516-41714535 Msa0328840:intron 35.0%
CAATGCTACATGAATGAAAC+TGG - chr2_4:41714558-41714577 Msa0328840:intron 35.0%
AGTCCATGATGTTTATAGAG+TGG - chr2_4:41714613-41714632 Msa0328840:CDS 35.0%
CTTCCACTCTATAAACATCA+TGG + chr2_4:41714619-41714638 None:intergenic 35.0%
GCATTGTTTATGTATCATCG+TGG - chr2_4:41714714-41714733 Msa0328840:CDS 35.0%
TTTATGTATCATCGTGGAGA+TGG - chr2_4:41714720-41714739 Msa0328840:CDS 35.0%
GATTCTGAATTTCAGGATCT+TGG + chr2_4:41714755-41714774 None:intergenic 35.0%
!! GATTGGAACTCTTTCTAGCT+TGG - chr2_4:41710915-41710934 Msa0328840:CDS 40.0%
CTTCCTCCTGTTGAAAAGAA+GGG - chr2_4:41710949-41710968 Msa0328840:CDS 40.0%
! GTAGAACCCTTCTTTTCAAC+AGG + chr2_4:41710958-41710977 None:intergenic 40.0%
AGGGTTCTACTGTAGCAATA+TGG - chr2_4:41710968-41710987 Msa0328840:CDS 40.0%
! TTGAGTTGTGCGATGGAAAT+TGG + chr2_4:41710998-41711017 None:intergenic 40.0%
! CATAGGTCCAAATTGATGGT+TGG + chr2_4:41711086-41711105 None:intergenic 40.0%
TATCTTTACGACGGTGATTG+AGG - chr2_4:41712561-41712580 Msa0328840:intron 40.0%
! TTTGGAACATCCACTGCATT+GGG - chr2_4:41712885-41712904 Msa0328840:CDS 40.0%
ATGCTTTGCAAGGGATAGAT+TGG - chr2_4:41713549-41713568 Msa0328840:intron 40.0%
! TGAGAACTTTGTTTGGACTG+TGG - chr2_4:41713573-41713592 Msa0328840:intron 40.0%
! GAGAACTTTGTTTGGACTGT+GGG - chr2_4:41713574-41713593 Msa0328840:intron 40.0%
GATGATGTGTACGATGTGTA+TGG - chr2_4:41713670-41713689 Msa0328840:intron 40.0%
TAGATGGGATCTAAATGCCA+TGG - chr2_4:41713833-41713852 Msa0328840:intron 40.0%
TCTATGTATTCTCCAAGGCT+TGG + chr2_4:41714249-41714268 None:intergenic 40.0%
GAGAATGCATGGATATCCAT+AGG - chr2_4:41714267-41714286 Msa0328840:intron 40.0%
AAGTATAGTAGGTGCACCTA+TGG + chr2_4:41714286-41714305 None:intergenic 40.0%
TGCGGTAAATCTTGCTAGAA+TGG - chr2_4:41714692-41714711 Msa0328840:CDS 40.0%
! TTTCAGGATCTTGGTTGGTA+TGG + chr2_4:41714746-41714765 None:intergenic 40.0%
CTGAATTTCAGGATCTTGGT+TGG + chr2_4:41714751-41714770 None:intergenic 40.0%
!! GATTGGAACTCTTTCTAGCT+TGG - chr2_4:41710915-41710934 Msa0328840:CDS 40.0%
CTTCCTCCTGTTGAAAAGAA+GGG - chr2_4:41710949-41710968 Msa0328840:CDS 40.0%
! GTAGAACCCTTCTTTTCAAC+AGG + chr2_4:41710958-41710977 None:intergenic 40.0%
AGGGTTCTACTGTAGCAATA+TGG - chr2_4:41710968-41710987 Msa0328840:CDS 40.0%
! TTGAGTTGTGCGATGGAAAT+TGG + chr2_4:41710998-41711017 None:intergenic 40.0%
! CATAGGTCCAAATTGATGGT+TGG + chr2_4:41711086-41711105 None:intergenic 40.0%
TATCTTTACGACGGTGATTG+AGG - chr2_4:41712561-41712580 Msa0328840:intron 40.0%
! TTTGGAACATCCACTGCATT+GGG - chr2_4:41712885-41712904 Msa0328840:CDS 40.0%
ATGCTTTGCAAGGGATAGAT+TGG - chr2_4:41713549-41713568 Msa0328840:intron 40.0%
! TGAGAACTTTGTTTGGACTG+TGG - chr2_4:41713573-41713592 Msa0328840:intron 40.0%
! GAGAACTTTGTTTGGACTGT+GGG - chr2_4:41713574-41713593 Msa0328840:intron 40.0%
GATGATGTGTACGATGTGTA+TGG - chr2_4:41713670-41713689 Msa0328840:intron 40.0%
TAGATGGGATCTAAATGCCA+TGG - chr2_4:41713833-41713852 Msa0328840:intron 40.0%
TCTATGTATTCTCCAAGGCT+TGG + chr2_4:41714249-41714268 None:intergenic 40.0%
GAGAATGCATGGATATCCAT+AGG - chr2_4:41714267-41714286 Msa0328840:intron 40.0%
AAGTATAGTAGGTGCACCTA+TGG + chr2_4:41714286-41714305 None:intergenic 40.0%
TGCGGTAAATCTTGCTAGAA+TGG - chr2_4:41714692-41714711 Msa0328840:CDS 40.0%
! TTTCAGGATCTTGGTTGGTA+TGG + chr2_4:41714746-41714765 None:intergenic 40.0%
CTGAATTTCAGGATCTTGGT+TGG + chr2_4:41714751-41714770 None:intergenic 40.0%
GCTTCCTCCTGTTGAAAAGA+AGG - chr2_4:41710948-41710967 Msa0328840:CDS 45.0%
! GAACCCTTCTTTTCAACAGG+AGG + chr2_4:41710955-41710974 None:intergenic 45.0%
CACTTGAGTTCAGACTCTTG+AGG - chr2_4:41712450-41712469 Msa0328840:intron 45.0%
TTCAGACTCTTGAGGCAACA+TGG - chr2_4:41712458-41712477 Msa0328840:intron 45.0%
!! AGGTAGGTTTGTTGACGTTG+AGG - chr2_4:41712717-41712736 Msa0328840:CDS 45.0%
!! GGTAGGTTTGTTGACGTTGA+GGG - chr2_4:41712718-41712737 Msa0328840:CDS 45.0%
!! CTTTGGAACATCCACTGCAT+TGG - chr2_4:41712884-41712903 Msa0328840:CDS 45.0%
TTGGAACATCCACTGCATTG+GGG - chr2_4:41712886-41712905 Msa0328840:CDS 45.0%
GTACGATGTGTATGGCACAT+TGG - chr2_4:41713678-41713697 Msa0328840:intron 45.0%
GTAGTTTGGGAGAGAATCCA+TGG + chr2_4:41713853-41713872 None:intergenic 45.0%
GAAGCAAAGTGGTACCATAG+TGG - chr2_4:41714216-41714235 Msa0328840:intron 45.0%
TTACGCCTTGCTAATGACCT+CGG - chr2_4:41714402-41714421 Msa0328840:intron 45.0%
ATGTTCCGAGGTCATTAGCA+AGG + chr2_4:41714410-41714429 None:intergenic 45.0%
!! AACTGGAGCTTCTGAAGTTG+AGG - chr2_4:41714575-41714594 Msa0328840:CDS 45.0%
GCTTCCTCCTGTTGAAAAGA+AGG - chr2_4:41710948-41710967 Msa0328840:CDS 45.0%
! GAACCCTTCTTTTCAACAGG+AGG + chr2_4:41710955-41710974 None:intergenic 45.0%
CACTTGAGTTCAGACTCTTG+AGG - chr2_4:41712450-41712469 Msa0328840:intron 45.0%
TTCAGACTCTTGAGGCAACA+TGG - chr2_4:41712458-41712477 Msa0328840:intron 45.0%
!! AGGTAGGTTTGTTGACGTTG+AGG - chr2_4:41712717-41712736 Msa0328840:CDS 45.0%
!! GGTAGGTTTGTTGACGTTGA+GGG - chr2_4:41712718-41712737 Msa0328840:CDS 45.0%
!! CTTTGGAACATCCACTGCAT+TGG - chr2_4:41712884-41712903 Msa0328840:CDS 45.0%
TTGGAACATCCACTGCATTG+GGG - chr2_4:41712886-41712905 Msa0328840:CDS 45.0%
GTACGATGTGTATGGCACAT+TGG - chr2_4:41713678-41713697 Msa0328840:intron 45.0%
GTAGTTTGGGAGAGAATCCA+TGG + chr2_4:41713853-41713872 None:intergenic 45.0%
GAAGCAAAGTGGTACCATAG+TGG - chr2_4:41714216-41714235 Msa0328840:intron 45.0%
TTACGCCTTGCTAATGACCT+CGG - chr2_4:41714402-41714421 Msa0328840:intron 45.0%
ATGTTCCGAGGTCATTAGCA+AGG + chr2_4:41714410-41714429 None:intergenic 45.0%
!! AACTGGAGCTTCTGAAGTTG+AGG - chr2_4:41714575-41714594 Msa0328840:CDS 45.0%
!!! TTAAAAAATTCTAATTTTTT+TGG + chr2_4:41711838-41711857 None:intergenic 5.0%
!!! AATATGAATTTTTATATTTT+TGG + chr2_4:41711893-41711912 None:intergenic 5.0%
!! TATTATTATTATTATTATAG+TGG - chr2_4:41714166-41714185 Msa0328840:intron 5.0%
!! ATTATTATTATTATTATAGT+GGG - chr2_4:41714167-41714186 Msa0328840:intron 5.0%
!!! TTAAAAAATTCTAATTTTTT+TGG + chr2_4:41711838-41711857 None:intergenic 5.0%
!!! AATATGAATTTTTATATTTT+TGG + chr2_4:41711893-41711912 None:intergenic 5.0%
!! TATTATTATTATTATTATAG+TGG - chr2_4:41714166-41714185 Msa0328840:intron 5.0%
!! ATTATTATTATTATTATAGT+GGG - chr2_4:41714167-41714186 Msa0328840:intron 5.0%
! CCTTGCATTGAGTTGTGCGA+TGG + chr2_4:41711005-41711024 None:intergenic 50.0%
CCATCGCACAACTCAATGCA+AGG - chr2_4:41711002-41711021 Msa0328840:CDS 50.0%
!! GGCTTGGTGTGTATCCACTA+TGG + chr2_4:41714233-41714252 None:intergenic 50.0%
AGTGGATACACACCAAGCCT+TGG - chr2_4:41714234-41714253 Msa0328840:intron 50.0%
! CCTTGCATTGAGTTGTGCGA+TGG + chr2_4:41711005-41711024 None:intergenic 50.0%
CCATCGCACAACTCAATGCA+AGG - chr2_4:41711002-41711021 Msa0328840:CDS 50.0%
!! GGCTTGGTGTGTATCCACTA+TGG + chr2_4:41714233-41714252 None:intergenic 50.0%
AGTGGATACACACCAAGCCT+TGG - chr2_4:41714234-41714253 Msa0328840:intron 50.0%
TGCATTGGGGAGTCCCTCGA+TGG - chr2_4:41712899-41712918 Msa0328840:CDS 60.0%
GCATTGGGGAGTCCCTCGAT+GGG - chr2_4:41712900-41712919 Msa0328840:CDS 60.0%
ACCACCTAGCCTCCCATCGA+GGG + chr2_4:41712915-41712934 None:intergenic 60.0%
AACCACCTAGCCTCCCATCG+AGG + chr2_4:41712916-41712935 None:intergenic 60.0%
TGCATTGGGGAGTCCCTCGA+TGG - chr2_4:41712899-41712918 Msa0328840:CDS 60.0%
GCATTGGGGAGTCCCTCGAT+GGG - chr2_4:41712900-41712919 Msa0328840:CDS 60.0%
ACCACCTAGCCTCCCATCGA+GGG + chr2_4:41712915-41712934 None:intergenic 60.0%
AACCACCTAGCCTCCCATCG+AGG + chr2_4:41712916-41712935 None:intergenic 60.0%
CGAGGGACTCCCCAATGCAG+TGG + chr2_4:41712898-41712917 None:intergenic 65.0%
TTGGGGAGTCCCTCGATGGG+AGG - chr2_4:41712903-41712922 Msa0328840:CDS 65.0%
GAGTCCCTCGATGGGAGGCT+AGG - chr2_4:41712908-41712927 Msa0328840:CDS 65.0%
TCCCTCGATGGGAGGCTAGG+TGG - chr2_4:41712911-41712930 Msa0328840:CDS 65.0%
CGAGGGACTCCCCAATGCAG+TGG + chr2_4:41712898-41712917 None:intergenic 65.0%
TTGGGGAGTCCCTCGATGGG+AGG - chr2_4:41712903-41712922 Msa0328840:CDS 65.0%
GAGTCCCTCGATGGGAGGCT+AGG - chr2_4:41712908-41712927 Msa0328840:CDS 65.0%
TCCCTCGATGGGAGGCTAGG+TGG - chr2_4:41712911-41712930 Msa0328840:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 41710795 41714903 41710795 ID=Msa0328840;Name=Msa0328840
chr2_4 mRNA 41710795 41714903 41710795 ID=Msa0328840-mRNA-1;Parent=Msa0328840;Name=Msa0328840-mRNA-1;_AED=0.10;_eAED=0.10;_QI=106|1|1|1|1|1|7|76|594
chr2_4 exon 41710795 41711176 41710795 ID=Msa0328840-mRNA-1:exon:12845;Parent=Msa0328840-mRNA-1
chr2_4 exon 41711264 41711512 41711264 ID=Msa0328840-mRNA-1:exon:12844;Parent=Msa0328840-mRNA-1
chr2_4 exon 41711724 41711862 41711724 ID=Msa0328840-mRNA-1:exon:12843;Parent=Msa0328840-mRNA-1
chr2_4 exon 41711964 41712182 41711964 ID=Msa0328840-mRNA-1:exon:12842;Parent=Msa0328840-mRNA-1
chr2_4 exon 41712649 41713024 41712649 ID=Msa0328840-mRNA-1:exon:12841;Parent=Msa0328840-mRNA-1
chr2_4 exon 41713201 41713459 41713201 ID=Msa0328840-mRNA-1:exon:12840;Parent=Msa0328840-mRNA-1
chr2_4 exon 41714561 41714903 41714561 ID=Msa0328840-mRNA-1:exon:12839;Parent=Msa0328840-mRNA-1
chr2_4 five_prime_UTR 41714798 41714903 41714798 ID=Msa0328840-mRNA-1:five_prime_utr;Parent=Msa0328840-mRNA-1
chr2_4 CDS 41714561 41714797 41714561 ID=Msa0328840-mRNA-1:cds;Parent=Msa0328840-mRNA-1
chr2_4 CDS 41713201 41713459 41713201 ID=Msa0328840-mRNA-1:cds;Parent=Msa0328840-mRNA-1
chr2_4 CDS 41712649 41713024 41712649 ID=Msa0328840-mRNA-1:cds;Parent=Msa0328840-mRNA-1
chr2_4 CDS 41711964 41712182 41711964 ID=Msa0328840-mRNA-1:cds;Parent=Msa0328840-mRNA-1
chr2_4 CDS 41711724 41711862 41711724 ID=Msa0328840-mRNA-1:cds;Parent=Msa0328840-mRNA-1
chr2_4 CDS 41711264 41711512 41711264 ID=Msa0328840-mRNA-1:cds;Parent=Msa0328840-mRNA-1
chr2_4 CDS 41710871 41711176 41710871 ID=Msa0328840-mRNA-1:cds;Parent=Msa0328840-mRNA-1
chr2_4 three_prime_UTR 41710795 41710870 41710795 ID=Msa0328840-mRNA-1:three_prime_utr;Parent=Msa0328840-mRNA-1
Gene Sequence

>Msa0328840

ATGGCTTTACCTATGATTGGAACTCTTTCTAGCTTGGCCAAAAAAATGCTTCCTCCTGTTGAAAAGAAGGGTTCTACTGTAGCAATATGGAACTCCAATTTCCATCGCACAACTCAATGCAAGGTATCATATAAGGATGCAAAAGATTATAGTCAAACAATCACTCGTCGAGTTGCTAATTTCCAACCATCAATTTGGACCTATGATCATATACAATCATTAAGTAGTGAATATAAGGAAGTAATGTACACAAAGCAATGGACAATTTTAAAGGAAAAAGTAAGAATGATGCTTAACAAAACGGAAAATGAGCTTGATCAACTTGAGTTTATTGATGTATTGCAAAGGCTTGGAGTGTCATACCATTTTAATAATGAAATTAGGGACATATTGGATAACATTTACAACAAACAATCATTCAAGTTGAAGAAGAATTTACATGCGACAGCACTTGAGTTCAGACTCTTGAGGCAACATGGTTATGATATATCACCAGATGTTTTTGTTTGCTTTGAAGATGAAATTTGTAATTTCAAGAAAGGTAGGTTTGTTGACGTTGAGGGAATGTTATCATTGTATGAAGCATCGTTTCATTCATTTGAAGATGAACCTATATTGGATGAAGCAAGAGATGTCACATCAAAGTTTCTCAAAGAATTTTTCGACCAAAATGAAGATAAGAACGTATCACTTCAAATAAGTCATGCTTTGGAACATCCACTGCATTGGGGAGTCCCTCGATGGGAGGCTAGGTGGTTCATTGATATATACGAAAGACAACAAAATAAGAATCATGTTTTACTTGAATTTGCTAAATTGGATTTCAACATTCTTCAAAGCTTCTACCAAGAAGACCTTAAGTATACATCAAGATGGTGGAAAAGAACTAAACTTGGAGACAATTTATGCTTTGCAAGGGATAGATTGGTTGAGAACTTTGTTTGGACTGTGGGAACAAATTTCAAACCAGATTTTAAATATTTACGAAAAGTTATGACAAAGGTCAATTCCTTAATTACCATCATTGATGATGTGTACGATGTGTATGGCACATTGGAAGAACTAGAGCTCTTCACAAAAGCAGTTGATAGATGGGATCTAAATGCCATGGATTCTCTCCCAAACTACATGAAAATATGCTTTCATGCACTCTATAACTTTGTGAGTGAACTTGCTTTTGAAACTTTGAAAAAGTGTGGCTACCATATCACTCCATACCTAAAAAAAGCGTGGGCAGATCTATGTAAATCATATTTGATTGAAGCAAAGTGGTACCATAGTGGATACACACCAAGCCTTGGAGAATACATAGAGAATGCATGGATATCCATAGGTGCACCTACTATACTTACTCATGCTTACTTTGTGATTCCACATTCATTCAAAATGGAAGACTTGGTTAGTTTAGAAGAAAACTCCAACATAATTAGACTTTCAGCAATAATTTTACGCCTTGCTAATGACCTCGGAACATATAAACGTGAAAAAGAGACGGGTGATATTCCAAAGTCAATTCAATGCTACATGAATGAAACTGGAGCTTCTGAAGTTGAGGCTTGTGAGTATGTTAAGTCCATGATGTTTATAGAGTGGAAGAAGTTGAATAAAGAAGCTCATAGTTCATCTTTCTCTCAATATTTCATAGATACTGCGGTAAATCTTGCTAGAATGGCATTGTTTATGTATCATCGTGGAGATGGCCATACCAACCAAGATCCTGAAATTCAGAATCAAATTGCATCATTAGTTTTTCAGCCGATTCCTATTGTATGTACAAAACATTAA
Protein sequence

>Msa0328840

MALPMIGTLSSLAKKMLPPVEKKGSTVAIWNSNFHRTTQCKVSYKDAKDYSQTITRRVANFQPSIWTYDHIQSLSSEYKEVMYTKQWTILKEKVRMMLNKTENELDQLEFIDVLQRLGVSYHFNNEIRDILDNIYNKQSFKLKKNLHATALEFRLLRQHGYDISPDVFVCFEDEICNFKKGRFVDVEGMLSLYEASFHSFEDEPILDEARDVTSKFLKEFFDQNEDKNVSLQISHALEHPLHWGVPRWEARWFIDIYERQQNKNHVLLEFAKLDFNILQSFYQEDLKYTSRWWKRTKLGDNLCFARDRLVENFVWTVGTNFKPDFKYLRKVMTKVNSLITIIDDVYDVYGTLEELELFTKAVDRWDLNAMDSLPNYMKICFHALYNFVSELAFETLKKCGYHITPYLKKAWADLCKSYLIEAKWYHSGYTPSLGEYIENAWISIGAPTILTHAYFVIPHSFKMEDLVSLEENSNIIRLSAIILRLANDLGTYKREKETGDIPKSIQCYMNETGASEVEACEYVKSMMFIEWKKLNKEAHSSSFSQYFIDTAVNLARMALFMYHRGDGHTNQDPEIQNQIASLVFQPIPIVCTKH*