AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0290850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0290850 MtrunA17_Chr2g0310331 86.097 597 76 3 1 596 1 591 0.0 1065
Msa0290850 MtrunA17_Chr8g0357411 69.374 591 177 3 1 590 1 588 0.0 850
Msa0290850 MtrunA17_Chr2g0310401 71.194 427 122 1 165 590 5 431 0.0 623
Msa0290850 MtrunA17_Chr4g0023911 48.244 541 266 8 57 589 45 579 4.81e-164 480
Msa0290850 MtrunA17_Chr8g0357221 67.577 293 92 2 1 293 1 290 1.00e-136 399
Msa0290850 MtrunA17_Chr8g0357231 69.767 258 77 1 334 590 1 258 1.63e-131 385
Msa0290850 MtrunA17_Chr4g0042111 37.660 547 325 8 56 591 21 562 2.21e-115 355
Msa0290850 MtrunA17_Chr2g0323131 37.870 507 307 5 86 590 64 564 3.65e-110 341
Msa0290850 MtrunA17_Chr6g0465441 33.948 542 349 6 57 591 14 553 2.65e-107 333
Msa0290850 MtrunA17_Chr2g0323151 38.797 482 288 4 110 590 4 479 3.21e-107 331
Msa0290850 MtrunA17_Chr4g0024691 35.091 550 346 8 50 591 15 561 1.26e-105 329
Msa0290850 MtrunA17_Chr6g0451711 34.177 553 352 8 48 591 8 557 3.71e-104 325
Msa0290850 MtrunA17_Chr7g0236991 34.254 543 346 6 57 591 14 553 1.13e-103 324
Msa0290850 MtrunA17_Chr6g0466051 33.821 547 351 6 53 591 10 553 1.19e-103 324
Msa0290850 MtrunA17_Chr8g0336181 35.219 548 342 8 55 591 11 556 5.06e-103 323
Msa0290850 MtrunA17_Chr7g0237001 34.070 543 347 6 57 591 14 553 5.86e-103 322
Msa0290850 MtrunA17_Chr7g0237041 34.070 543 347 6 57 591 14 553 5.86e-103 322
Msa0290850 MtrunA17_Chr7g0237081 34.070 543 347 6 57 591 14 553 5.86e-103 322
Msa0290850 MtrunA17_Chr7g0237051 34.070 543 347 6 57 591 14 553 5.86e-103 322
Msa0290850 MtrunA17_Chr6g0465911 33.638 547 352 6 53 591 10 553 6.12e-103 322
Msa0290850 MtrunA17_Chr5g0425371 34.502 542 346 6 57 591 14 553 2.13e-102 321
Msa0290850 MtrunA17_Chr3g0082691 34.743 544 343 8 57 591 13 553 4.71e-101 317
Msa0290850 MtrunA17_Chr6g0465851 33.922 510 330 4 88 591 10 518 5.23e-100 313
Msa0290850 MtrunA17_Chr7g0236961 34.669 499 320 3 98 591 1 498 6.49e-100 312
Msa0290850 MtrunA17_Chr7g0237011 34.269 499 322 3 98 591 1 498 4.94e-99 310
Msa0290850 MtrunA17_Chr2g0319041 34.244 549 346 9 55 591 12 557 2.93e-98 310
Msa0290850 MtrunA17_Chr3g0105071 33.516 546 351 8 55 591 15 557 4.47e-98 310
Msa0290850 MtrunA17_Chr5g0431571 34.559 544 344 8 57 591 9 549 2.28e-96 305
Msa0290850 MtrunA17_Chr2g0319051 34.563 515 324 7 87 591 3 514 3.06e-96 303
Msa0290850 MtrunA17_Chr5g0431651 32.418 546 354 8 57 591 11 552 5.05e-90 288
Msa0290850 MtrunA17_Chr4g0008621 38.631 409 239 6 55 453 19 425 3.95e-85 272
Msa0290850 MtrunA17_Chr6g0465981 40.164 366 209 5 53 411 10 372 8.13e-85 269
Msa0290850 MtrunA17_Chr6g0465871 40.164 366 209 5 53 411 10 372 8.13e-85 269
Msa0290850 MtrunA17_Chr6g0466081 40.164 366 209 5 53 411 10 372 8.13e-85 269
Msa0290850 MtrunA17_Chr4g0048921 33.594 512 326 7 85 589 65 569 3.64e-83 271
Msa0290850 MtrunA17_Chr6g0465931 41.337 329 187 3 88 411 10 337 6.11e-82 260
Msa0290850 MtrunA17_Chr6g0466111 41.337 329 187 3 88 411 10 337 7.98e-82 260
Msa0290850 MtrunA17_Chr3g0108941 31.801 522 326 12 83 585 3 513 7.29e-80 261
Msa0290850 MtrunA17_Chr2g0280581 32.948 519 324 8 85 585 5 517 9.59e-80 261
Msa0290850 MtrunA17_Chr7g0236951 42.271 317 178 2 98 410 1 316 1.14e-79 254
Msa0290850 MtrunA17_Chr3g0109001 32.375 522 323 12 83 585 3 513 4.23e-79 259
Msa0290850 MtrunA17_Chr7g0217361 42.053 302 169 4 291 588 8 307 6.85e-79 251
Msa0290850 MtrunA17_Chr7g0237031 41.640 317 180 2 98 410 1 316 7.48e-79 252
Msa0290850 MtrunA17_Chr3g0105691 31.862 521 326 12 83 585 36 545 3.15e-78 258
Msa0290850 MtrunA17_Chr4g0048911 33.936 498 313 8 84 571 51 542 5.37e-78 257
Msa0290850 MtrunA17_Chr3g0109021 30.888 518 335 10 83 585 3 512 1.43e-76 252
Msa0290850 MtrunA17_Chr3g0109031 30.739 514 341 9 83 585 3 512 2.55e-76 251
Msa0290850 MtrunA17_Chr6g0477111 32.172 488 311 10 112 585 6 487 3.63e-76 250
Msa0290850 MtrunA17_Chr3g0099031 32.317 492 322 6 84 565 4 494 5.63e-76 250
Msa0290850 MtrunA17_Chr3g0108991 31.094 521 330 12 83 585 3 512 1.27e-75 249
Msa0290850 MtrunA17_Chr3g0108951 31.094 521 330 12 83 585 3 512 1.27e-75 249
Msa0290850 MtrunA17_Chr7g0236971 33.085 402 267 2 191 591 1 401 1.54e-74 243
Msa0290850 MtrunA17_Chr3g0109011 31.911 492 307 11 112 585 6 487 2.15e-74 246
Msa0290850 MtrunA17_Chr3g0108971 31.707 492 308 11 112 585 6 487 1.59e-73 243
Msa0290850 MtrunA17_Chr3g0108981 31.134 485 321 6 112 585 6 488 3.99e-73 242
Msa0290850 MtrunA17_Chr3g0108961 31.134 485 321 6 112 585 6 488 3.99e-73 242
Msa0290850 MtrunA17_Chr2g0310411 68.047 169 48 3 1 167 1 165 8.42e-69 220
Msa0290850 MtrunA17_Chr6g0477121 33.333 408 259 8 167 565 9 412 2.96e-65 219
Msa0290850 MtrunA17_Chr5g0445511 40.789 228 133 2 186 412 1 227 3.76e-56 189
Msa0290850 MtrunA17_Chr2g0319071 29.045 513 307 11 87 589 22 487 6.60e-53 188
Msa0290850 MtrunA17_Chr3g0101681 29.867 452 280 14 108 529 275 719 5.12e-45 171
Msa0290850 MtrunA17_Chr2g0310121 29.009 424 267 11 108 503 274 691 2.42e-44 169
Msa0290850 MtrunA17_Chr7g0237071 40.394 203 116 2 98 296 1 202 5.95e-41 148
Msa0290850 MtrunA17_Chr2g0319081 29.139 302 196 6 294 591 140 427 5.23e-37 142
Msa0290850 MtrunA17_Chr2g0319081 38.017 121 67 4 57 170 21 140 2.94e-11 65.9
Msa0290850 MtrunA17_Chr6g0466031 26.154 260 191 1 333 591 1 260 1.72e-32 125
Msa0290850 MtrunA17_Chr6g0466021 39.691 194 107 5 53 239 10 200 1.33e-30 119
Msa0290850 MtrunA17_Chr2g0281651 31.646 237 155 4 269 503 43 274 2.82e-30 123
Msa0290850 MtrunA17_Chr7g0217351 36.598 194 114 4 107 294 83 273 3.20e-29 117
Msa0290850 MtrunA17_Chr7g0237061 27.308 260 165 2 333 591 1 237 6.29e-29 115
Msa0290850 MtrunA17_Chr7g0233861 41.481 135 70 1 232 366 33 158 3.22e-27 108
Msa0290850 MtrunA17_Chr7g0218001 29.615 260 152 5 112 341 349 607 1.65e-22 102
Msa0290850 MtrunA17_Chr7g0259881 26.132 287 175 6 112 368 232 511 9.25e-22 99.8
Msa0290850 MtrunA17_Chr7g0218041 27.615 239 149 5 153 368 1 238 1.02e-15 79.7
Msa0290850 MtrunA17_Chr7g0236981 33.607 122 72 4 57 171 14 133 7.07e-13 66.2
Msa0290850 MtrunA17_Chr5g0445401 44.048 84 46 1 205 287 5 88 8.35e-13 64.7
Msa0290850 MtrunA17_Chr5g0445501 26.590 173 124 3 421 591 1 172 2.16e-12 65.9
Msa0290850 MtrunA17_Chr7g0237021 22.674 172 132 1 421 591 1 172 9.36e-12 63.9
Msa0290850 MtrunA17_Chr7g0236941 22.674 172 132 1 421 591 1 172 9.36e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0290850 AT3G25820.1 47.217 557 267 11 55 591 45 594 1.42e-171 501
Msa0290850 AT3G25830.1 47.217 557 267 11 55 591 45 594 1.42e-171 501
Msa0290850 AT2G24210.1 45.884 571 290 13 36 591 24 590 2.19e-166 487
Msa0290850 AT3G25810.1 46.429 560 270 12 55 591 45 597 8.68e-164 481
Msa0290850 AT4G16730.1 45.810 537 272 8 72 591 5 539 1.56e-162 475
Msa0290850 AT4G16740.1 44.425 565 279 11 47 591 15 564 1.28e-161 474
Msa0290850 AT4G16730.2 45.842 493 254 5 112 591 1 493 7.04e-155 454
Msa0290850 AT3G25820.2 45.960 396 193 8 55 436 45 433 2.23e-115 351
Msa0290850 AT4G16740.2 44.935 385 181 8 47 412 15 387 3.65e-104 320
Msa0290850 AT3G25820.4 46.933 326 152 8 55 366 45 363 2.83e-90 285
Msa0290850 AT3G25820.3 46.933 326 152 8 55 366 45 363 2.83e-90 285
Msa0290850 AT5G23960.2 31.876 549 354 9 55 591 5 545 1.42e-86 280
Msa0290850 AT4G16740.4 43.889 360 171 8 47 387 15 362 1.70e-86 274
Msa0290850 AT4G16740.3 43.889 360 171 8 47 387 15 362 1.70e-86 274
Msa0290850 AT5G23960.1 32.123 551 352 10 55 591 5 547 4.79e-86 278
Msa0290850 AT1G61680.1 34.820 471 299 5 110 574 94 562 1.01e-85 278
Msa0290850 AT1G61680.2 34.607 471 293 6 110 574 94 555 1.07e-84 275
Msa0290850 AT1G70080.1 32.661 545 350 10 54 584 63 604 1.34e-75 252
Msa0290850 AT3G14520.1 28.415 549 374 7 56 591 62 604 2.26e-73 246
Msa0290850 AT1G31950.1 28.336 547 367 11 61 591 69 606 2.37e-71 241
Msa0290850 AT1G31950.3 28.233 549 366 12 61 591 69 607 9.82e-71 239
Msa0290850 AT3G14540.1 27.467 608 405 13 6 591 8 601 2.02e-70 238
Msa0290850 AT3G29410.1 28.044 542 383 6 56 591 63 603 7.17e-70 237
Msa0290850 AT3G29410.2 27.510 498 357 3 98 591 1 498 7.74e-66 223
Msa0290850 AT1G33750.1 28.415 549 370 10 56 591 65 603 4.21e-65 224
Msa0290850 AT3G14490.1 27.818 550 376 11 56 591 59 601 4.97e-64 221
Msa0290850 AT3G32030.1 27.407 540 379 9 62 591 68 604 1.50e-62 217
Msa0290850 AT3G29110.1 28.130 583 405 10 20 589 14 595 1.81e-60 211
Msa0290850 AT4G15870.1 27.390 544 372 9 51 584 61 591 1.05e-59 209
Msa0290850 AT3G29190.1 28.597 549 382 7 52 591 54 601 8.07e-59 207
Msa0290850 AT1G31950.2 28.667 450 297 10 61 495 69 509 1.45e-57 202
Msa0290850 AT3G14540.2 27.432 514 341 11 6 500 8 508 3.89e-57 200
Msa0290850 AT5G44630.1 27.767 515 359 8 87 589 42 555 5.53e-54 193
Msa0290850 AT4G20210.1 25.628 597 430 8 4 591 9 600 2.62e-53 192
Msa0290850 AT4G20230.1 26.531 539 385 8 56 584 61 598 3.44e-53 192
Msa0290850 AT4G20230.2 26.531 539 385 8 56 584 73 610 4.45e-53 192
Msa0290850 AT1G66020.1 27.698 556 376 12 53 591 52 598 4.68e-53 191
Msa0290850 AT4G20200.1 27.306 553 382 10 53 591 58 604 1.35e-52 190
Msa0290850 AT1G48800.1 28.205 546 365 11 57 584 63 599 3.46e-51 186
Msa0290850 AT4G13300.1 25.878 541 389 9 59 589 14 552 9.03e-51 184
Msa0290850 AT2G23230.2 26.888 543 383 7 57 587 56 596 4.52e-49 180
Msa0290850 AT1G48820.1 28.358 536 339 11 57 586 63 559 1.72e-48 178
Msa0290850 AT2G23230.1 26.519 543 380 7 57 587 56 591 4.63e-48 177
Msa0290850 AT4G13280.2 26.103 544 388 10 59 591 14 554 2.29e-46 172
Msa0290850 AT1G79460.1 26.692 517 342 12 105 591 270 779 3.25e-42 163
Msa0290850 AT1G66020.2 30.056 356 235 8 53 400 52 401 9.52e-40 150
Msa0290850 AT5G48110.1 28.363 342 239 6 252 591 2 339 3.63e-39 147
Msa0290850 AT4G13280.1 25.735 544 360 13 59 591 14 524 8.64e-39 150
Msa0290850 AT1G61120.1 28.829 444 270 12 107 520 283 710 4.93e-33 135
Msa0290850 AT4G02780.1 30.303 264 151 6 112 344 334 595 1.29e-22 103

Find 102 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTAATTTCATTGTTAAAA+TGG 0.130163 2_3:+38815062 None:intergenic
AATATGTCTTTCCCTATATT+TGG 0.133526 2_3:-38815873 Msa0290850:CDS
TTTACTTGAATTTGCTAAAT+TGG 0.149491 2_3:-38814446 Msa0290850:CDS
GCAATTCGATTCTGAATTTC+AGG 0.188613 2_3:+38812601 None:intergenic
ATGTAAATTCTTCTTCATTT+TGG 0.195839 2_3:+38815006 None:intergenic
CTAATTTCCAACCATCAATT+TGG 0.219395 2_3:-38815692 Msa0290850:CDS
ATTTGAAGATGAACCTATAT+TGG 0.220192 2_3:-38814647 Msa0290850:CDS
ATACGTTCTTATCTTCATTT+TGG 0.245554 2_3:+38814578 None:intergenic
ATCATCAATGATGGTAATTA+AGG 0.253672 2_3:+38813768 None:intergenic
TTGATTGGGTAATATATATT+AGG 0.263204 2_3:-38816040 Msa0290850:five_prime_UTR
TTGAGTTGAACGAGGGAAAT+TGG 0.266820 2_3:+38815773 None:intergenic
GATTCCACATTCATTCAAAA+TGG 0.278555 2_3:-38813037 Msa0290850:CDS
TTAGCTATAAAAGGACAATT+TGG 0.287852 2_3:+38815894 None:intergenic
AAGAAAACTCCAACATAATT+AGG 0.306044 2_3:-38812996 Msa0290850:CDS
TCAATGCAAGGTATCATATA+TGG 0.307502 2_3:-38815754 Msa0290850:CDS
TTTCGTAAATATTTAAAATC+TGG 0.312383 2_3:+38813811 None:intergenic
AAAGACATATTAGCTATAAA+AGG 0.313052 2_3:+38815885 None:intergenic
CAATGAAATTAGGGACATAT+TGG 0.313580 2_3:-38815053 Msa0290850:CDS
GTCATTAACTAGTGAATATA+AGG 0.331422 2_3:-38815652 Msa0290850:intron
AGGATTCTACTCAAGCATTA+TGG 0.340231 2_3:-38815800 Msa0290850:CDS
AATGGAAGAGTTCCAAATAT+AGG 0.340862 2_3:+38815861 None:intergenic
CAATGCTACATGAATGAAAC+TGG 0.341142 2_3:-38812802 Msa0290850:CDS
AAGTATAGTAGGTGCACTTA+TGG 0.345706 2_3:+38813077 None:intergenic
ATGTATACTTAAGGTCTTCT+TGG 0.346794 2_3:+38814398 None:intergenic
TCTCTTGCTTCATCCAATAT+AGG 0.348986 2_3:+38814634 None:intergenic
ATATATAAGTTATGCTTGAT+TGG 0.350285 2_3:-38816055 None:intergenic
TTTGTACATAAAATAGGAAT+AGG 0.364334 2_3:+38812562 None:intergenic
GGTTTGTTAATTCTCTTCGT+TGG 0.368778 2_3:+38815977 None:intergenic
ATGGAAGAGTTCCAAATATA+GGG 0.369243 2_3:+38815862 None:intergenic
GATTGGTTGAGAACTTTGTT+TGG 0.376926 2_3:-38813855 Msa0290850:CDS
ACTTCAAATAAGTCATGCTT+TGG 0.381812 2_3:-38814554 Msa0290850:CDS
ATTAATAGTATTAACCTTGT+TGG 0.389303 2_3:-38812537 Msa0290850:exon
TTTGGAACATCCACTGCATT+GGG 0.391831 2_3:-38814536 Msa0290850:CDS
ATGCTTTGCAAGGGATAGAT+TGG 0.394984 2_3:-38813872 Msa0290850:CDS
CTGAATTTCAGGATCTTGAA+TGG 0.407788 2_3:+38812612 None:intergenic
TAAGCATGAGTAAGTATAGT+AGG 0.415253 2_3:+38813066 None:intergenic
GTTTGTTAATTCTCTTCGTT+GGG 0.418243 2_3:+38815978 None:intergenic
TCTTCACAAAAGCAGTTGAT+AGG 0.429846 2_3:-38813708 Msa0290850:intron
AGCACCTTGATGTATACTTA+AGG 0.432930 2_3:+38814389 None:intergenic
TGATCATAGGTCCAAATTGA+TGG 0.438502 2_3:+38815681 None:intergenic
TATATAAGTTATGCTTGATT+GGG 0.439538 2_3:-38816054 None:intergenic
ATGTAGCATTGAATTGACTT+TGG 0.445177 2_3:+38812814 None:intergenic
TGCTGAAAGCCTAATTATGT+TGG 0.450526 2_3:+38812987 None:intergenic
TGCTGTAAACCATGCTAGAA+TGG 0.450556 2_3:-38812668 Msa0290850:CDS
CTTTGGAACATCCACTGCAT+TGG 0.453996 2_3:-38814537 Msa0290850:CDS
GAGTCCCTCGATGGGAGGCT+AGG 0.467693 2_3:-38814513 Msa0290850:CDS
ATTGATGTATTGCAAAGGCT+TGG 0.476788 2_3:-38815094 Msa0290850:CDS
GGCTTGGTGTGTATCCACTA+TGG 0.480255 2_3:+38813130 None:intergenic
TAATGACTGTATATGATCAT+AGG 0.488829 2_3:+38815668 None:intergenic
GGTCGGTTTGTTGACGTTGA+GGG 0.490013 2_3:-38814703 Msa0290850:CDS
AAGAATGATGCTTAACAAAA+CGG 0.497193 2_3:-38815143 Msa0290850:CDS
TTCATTCAAAATGGAAGACT+TGG 0.497580 2_3:-38813028 Msa0290850:CDS
GAGACAATTTATGCTTTGCA+AGG 0.504853 2_3:-38813882 Msa0290850:CDS
TTTCAGGATCTTGAATGGTA+TGG 0.505009 2_3:+38812617 None:intergenic
TGCATTGGGGAGTCCCTCGA+TGG 0.509350 2_3:-38814522 Msa0290850:CDS
ATAGGGTTTCATTCTCAAGA+AGG 0.509411 2_3:+38812465 None:intergenic
AACAAAACGGAAAATAAGCT+TGG 0.510731 2_3:-38815130 Msa0290850:CDS
AAAGCAATGCTCAATTCTAA+AGG 0.512815 2_3:-38815173 Msa0290850:CDS
GAGAATACTTAGAGAATGCA+TGG 0.516711 2_3:-38813104 Msa0290850:CDS
TCTAAGTATTCTCCAAGGCT+TGG 0.517090 2_3:+38813114 None:intergenic
TTTATGTATCATCGTGGAGA+TGG 0.524795 2_3:-38812640 Msa0290850:CDS
GAGAACTTTGTTTGGACTGT+GGG 0.531644 2_3:-38813847 Msa0290850:CDS
AGTGGATACACACCAAGCCT+TGG 0.533055 2_3:-38813126 Msa0290850:CDS
CATATTTGATTGAAGCAAAG+TGG 0.534124 2_3:-38813155 Msa0290850:CDS
AACTGGAGCTTCTGAAGTTG+AGG 0.542366 2_3:-38812785 Msa0290850:CDS
CCCTCGTTCAACTCAATGCA+AGG 0.543886 2_3:-38815766 Msa0290850:CDS
CTTCCACTCTATAAACATCA+TGG 0.551044 2_3:+38812744 None:intergenic
TGGTGGAAAAGAACTAAACT+TGG 0.552083 2_3:-38813904 Msa0290850:CDS
ATCGTACACATCATCAATGA+TGG 0.554157 2_3:+38813759 None:intergenic
CATAGGTCCAAATTGATGGT+TGG 0.559161 2_3:+38815685 None:intergenic
TTACGCCTTGCTAATGACCT+CGG 0.563093 2_3:-38812958 Msa0290850:CDS
GATGATGTGTACGATGTGTA+TGG 0.566503 2_3:-38813751 Msa0290850:CDS
AGCTTATTGATGTATTGCAA+AGG 0.567234 2_3:-38815099 Msa0290850:CDS
AACTTACTTTATATGTTCCG+AGG 0.571077 2_3:+38812941 None:intergenic
AGGTCGGTTTGTTGACGTTG+AGG 0.572740 2_3:-38814704 Msa0290850:CDS
CATGGTTATGATATATCCAC+AGG 0.575424 2_3:-38814950 Msa0290850:intron
TTCAGACTCTTGAGGCAACA+TGG 0.576372 2_3:-38814968 Msa0290850:CDS
AGTCCATGATGTTTATAGAG+TGG 0.576983 2_3:-38812747 Msa0290850:CDS
AGACAATTTATGCTTTGCAA+GGG 0.578399 2_3:-38813881 Msa0290850:CDS
TAAACAATGCCATTCTAGCA+TGG 0.580248 2_3:+38812659 None:intergenic
TAGATGGGATCTAAATGCCA+TGG 0.583752 2_3:-38813595 Msa0290850:CDS
GTAGTTTGGGAGAGAATCCA+TGG 0.590044 2_3:+38813578 None:intergenic
ACCACCTAGCCTCCCATCGA+GGG 0.602909 2_3:+38814509 None:intergenic
GCATTGGGGAGTCCCTCGAT+GGG 0.605686 2_3:-38814521 Msa0290850:CDS
CGAGGGACTCCCCAATGCAG+TGG 0.607874 2_3:+38814526 None:intergenic
ATGTTCCGAGGTCATTAGCA+AGG 0.610811 2_3:+38812953 None:intergenic
TTTACGAAAAGTTATGACAA+AGG 0.613165 2_3:-38813797 Msa0290850:CDS
GAAGCAAAGTGGTACCATAG+TGG 0.615723 2_3:-38813144 Msa0290850:CDS
TTGGGGAGTCCCTCGATGGG+AGG 0.619853 2_3:-38814518 Msa0290850:CDS
AAGACCTTAAGTATACATCA+AGG 0.621822 2_3:-38814393 Msa0290850:intron
TCCCTCGATGGGAGGCTAGG+TGG 0.625455 2_3:-38814510 Msa0290850:CDS
TGAGAACTTTGTTTGGACTG+TGG 0.632658 2_3:-38813848 Msa0290850:CDS
GAGTCTGAACTCAAGTGCTG+TGG 0.635212 2_3:+38814982 None:intergenic
CATTCTCTAAGTATTCTCCA+AGG 0.643831 2_3:+38813109 None:intergenic
TTGGAACATCCACTGCATTG+GGG 0.645337 2_3:-38814535 Msa0290850:CDS
CACTTGAGTTCAGACTCTTG+AGG 0.649831 2_3:-38814976 Msa0290850:CDS
ACCTTGCATTGAGTTGAACG+AGG 0.666241 2_3:+38815765 None:intergenic
CCTTGCATTGAGTTGAACGA+GGG 0.670798 2_3:+38815766 None:intergenic
AACCACCTAGCCTCCCATCG+AGG 0.678896 2_3:+38814508 None:intergenic
GCATTGTTTATGTATCATCG+TGG 0.679800 2_3:-38812646 Msa0290850:CDS
GTACGATGTGTATGGCACAT+TGG 0.688383 2_3:-38813743 Msa0290850:CDS
AAACAATCAATACACCAACA+AGG 0.698749 2_3:+38812523 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATAATAATTTTTATTA+TGG + chr2_3:38814259-38814278 None:intergenic 0.0%
!! TAATAATAATAATAATTATA+AGG + chr2_3:38815085-38815104 None:intergenic 0.0%
!!! ATTTCCTATAATATTTTTTA+AGG + chr2_3:38812505-38812524 None:intergenic 10.0%
!! CAATCCTTAAAAAATATTAT+AGG - chr2_3:38812498-38812517 Msa0290850:three_prime_UTR 15.0%
!!! GATCTAAATATATTTTTTCT+AGG - chr2_3:38812885-38812904 Msa0290850:intron 15.0%
!!! TTAAAGAATTATTTTTGTGT+GGG - chr2_3:38813024-38813043 Msa0290850:CDS 15.0%
!!! TTTTCAAAAGATTTTTTACA+TGG + chr2_3:38813072-38813091 None:intergenic 15.0%
!!! GTAAAAAATCTTTTGAAAAA+TGG - chr2_3:38813073-38813092 Msa0290850:CDS 15.0%
!! ATGAAAAACAAAATATTGTA+TGG - chr2_3:38813173-38813192 Msa0290850:CDS 15.0%
!! TAATATATGGTTTCAAATTA+TGG + chr2_3:38813686-38813705 None:intergenic 15.0%
!! ATAATATTCCAAGTAATATA+TGG + chr2_3:38813699-38813718 None:intergenic 15.0%
!!! GAAATATGTAACTTTAAAAA+AGG - chr2_3:38813787-38813806 Msa0290850:CDS 15.0%
!!! TATAAAAATCTACTTTTTAC+TGG + chr2_3:38814305-38814324 None:intergenic 15.0%
!!! TTTCGTAAATATTTAAAATC+TGG + chr2_3:38814703-38814722 None:intergenic 15.0%
!!! AGAAATTTTTTCAAATAAAG+TGG + chr2_3:38814863-38814882 None:intergenic 15.0%
!!! TAATGTTTTGTACATAAAAT+AGG + chr2_3:38815958-38815977 None:intergenic 15.0%
!! TTGATTGGGTAATATATATT+AGG - chr2_3:38812471-38812490 Msa0290850:three_prime_UTR 20.0%
!! CTACAATATATAGGAAAATT+TGG + chr2_3:38812558-38812577 None:intergenic 20.0%
!! TAGTACTTACTACAATATAT+AGG + chr2_3:38812567-38812586 None:intergenic 20.0%
!! TATATATTGTAGTAAGTACT+AGG - chr2_3:38812566-38812585 Msa0290850:CDS 20.0%
!! AAAGACATATTAGCTATAAA+AGG + chr2_3:38812629-38812648 None:intergenic 20.0%
!!! ATATTTTTGGTAAAGCTAAA+TGG + chr2_3:38812671-38812690 None:intergenic 20.0%
!!! CTTAAAGAATTATTTTTGTG+TGG - chr2_3:38813023-38813042 Msa0290850:CDS 20.0%
!!! TAAAGAATTATTTTTGTGTG+GGG - chr2_3:38813025-38813044 Msa0290850:CDS 20.0%
!!! AAAATCTTTTGAAAAATGGA+AGG - chr2_3:38813077-38813096 Msa0290850:CDS 20.0%
!!! AAAGTGTGATTATTTTTATG+TGG - chr2_3:38813150-38813169 Msa0290850:CDS 20.0%
!!! TGTTAGCATTTTTCATATTT+AGG + chr2_3:38813284-38813303 None:intergenic 20.0%
!!! ACCATTTTAACAATGAAATT+AGG - chr2_3:38813448-38813467 Msa0290850:intron 20.0%
!!! CCATTTTAACAATGAAATTA+GGG - chr2_3:38813449-38813468 Msa0290850:intron 20.0%
!!! ATGTAAATTCTTCTTCATTT+TGG + chr2_3:38813508-38813527 None:intergenic 20.0%
!!! ATTTGAAACCATATATTACT+TGG - chr2_3:38813688-38813707 Msa0290850:intron 20.0%
!!! TATGTAACTTTAAAAAAGGT+CGG - chr2_3:38813791-38813810 Msa0290850:CDS 20.0%
!!! TTTACTTGAATTTGCTAAAT+TGG - chr2_3:38814065-38814084 Msa0290850:intron 20.0%
!!! TTCTAAAATTCGATAACAAA+TGG - chr2_3:38814363-38814382 Msa0290850:intron 20.0%
!! CAATAAAATTAAGCATTAGT+CGG + chr2_3:38814573-38814592 None:intergenic 20.0%
!!! GACTAATGCTTAATTTTATT+GGG - chr2_3:38814572-38814591 Msa0290850:CDS 20.0%
!!! AATTTTTTCAAATAAAGTGG+AGG + chr2_3:38814860-38814879 None:intergenic 20.0%
!! AACAATTAGCGAAAAATTTA+AGG + chr2_3:38815634-38815653 None:intergenic 20.0%
!! TTTGTACATAAAATAGGAAT+AGG + chr2_3:38815952-38815971 None:intergenic 20.0%
!! ATTAATAGTATTAACCTTGT+TGG - chr2_3:38815974-38815993 Msa0290850:intron 20.0%
! TTAGCTATAAAAGGACAATT+TGG + chr2_3:38812620-38812639 None:intergenic 25.0%
! AATATGTCTTTCCCTATATT+TGG - chr2_3:38812638-38812657 Msa0290850:CDS 25.0%
! TAATGACTGTATATGATCAT+AGG + chr2_3:38812846-38812865 None:intergenic 25.0%
! GTCATTAACTAGTGAATATA+AGG - chr2_3:38812859-38812878 Msa0290850:intron 25.0%
!! TTCATATTTAGGACTTGTAA+TGG + chr2_3:38813273-38813292 None:intergenic 25.0%
!! TAACACCTTTTACTTAATTC+AGG - chr2_3:38813299-38813318 Msa0290850:intron 25.0%
! TACTTCCTGAATTAAGTAAA+AGG + chr2_3:38813307-38813326 None:intergenic 25.0%
! AAGAATGATGCTTAACAAAA+CGG - chr2_3:38813368-38813387 Msa0290850:intron 25.0%
! CCCTAATTTCATTGTTAAAA+TGG + chr2_3:38813452-38813471 None:intergenic 25.0%
! ATTTGAAGATGAACCTATAT+TGG - chr2_3:38813864-38813883 Msa0290850:CDS 25.0%
!! ATACGTTCTTATCTTCATTT+TGG + chr2_3:38813936-38813955 None:intergenic 25.0%
! TGAACATGTAATGTTTATCA+AGG + chr2_3:38814169-38814188 None:intergenic 25.0%
! CAAATGGAAAAACATTTCTA+AGG - chr2_3:38814379-38814398 Msa0290850:intron 25.0%
!! CGACTAATGCTTAATTTTAT+TGG - chr2_3:38814571-38814590 Msa0290850:CDS 25.0%
! TTATTGGGTATATTTGAAGA+TGG - chr2_3:38814587-38814606 Msa0290850:CDS 25.0%
! TTTACGAAAAGTTATGACAA+AGG - chr2_3:38814714-38814733 Msa0290850:CDS 25.0%
! ATCATCAATGATGGTAATTA+AGG + chr2_3:38814746-38814765 None:intergenic 25.0%
!!! ATTTTGTTGATGATTCTAGA+TGG - chr2_3:38814900-38814919 Msa0290850:intron 25.0%
!!! TTTTGTTGATGATTCTAGAT+GGG - chr2_3:38814901-38814920 Msa0290850:intron 25.0%
!! AGCATATTTTCATGTAGTTT+GGG + chr2_3:38814949-38814968 None:intergenic 25.0%
!! AAGCATATTTTCATGTAGTT+TGG + chr2_3:38814950-38814969 None:intergenic 25.0%
!! TTTGAAACTTTGAAAAAGTG+TGG - chr2_3:38815004-38815023 Msa0290850:CDS 25.0%
! AAGAAAACTCCAACATAATT+AGG - chr2_3:38815515-38815534 Msa0290850:intron 25.0%
! GTTTGTTAATTCTCTTCGTT+GGG + chr2_3:38812536-38812555 None:intergenic 30.0%
ATGGAAGAGTTCCAAATATA+GGG + chr2_3:38812652-38812671 None:intergenic 30.0%
AATGGAAGAGTTCCAAATAT+AGG + chr2_3:38812653-38812672 None:intergenic 30.0%
! GTAGAATCCTTCTTTTTAAC+AGG + chr2_3:38812701-38812720 None:intergenic 30.0%
! TCAATGCAAGGTATCATATA+TGG - chr2_3:38812757-38812776 Msa0290850:CDS 30.0%
CTAATTTCCAACCATCAATT+TGG - chr2_3:38812819-38812838 Msa0290850:CDS 30.0%
!! ACATGATTTGTTTCAATCAC+AGG - chr2_3:38813108-38813127 Msa0290850:CDS 30.0%
AAAGCAATGCTCAATTCTAA+AGG - chr2_3:38813338-38813357 Msa0290850:intron 30.0%
AACAAAACGGAAAATAAGCT+TGG - chr2_3:38813381-38813400 Msa0290850:intron 30.0%
AGCTTATTGATGTATTGCAA+AGG - chr2_3:38813412-38813431 Msa0290850:intron 30.0%
CAATGAAATTAGGGACATAT+TGG - chr2_3:38813458-38813477 Msa0290850:intron 30.0%
ACTTCAAATAAGTCATGCTT+TGG - chr2_3:38813957-38813976 Msa0290850:intron 30.0%
ATGTATACTTAAGGTCTTCT+TGG + chr2_3:38814116-38814135 None:intergenic 30.0%
AAGACCTTAAGTATACATCA+AGG - chr2_3:38814118-38814137 Msa0290850:intron 30.0%
AAATTTAGTTGCTCACTTGT+AGG - chr2_3:38814518-38814537 Msa0290850:CDS 30.0%
AGACAATTTATGCTTTGCAA+GGG - chr2_3:38814630-38814649 Msa0290850:CDS 30.0%
CATATTTGATTGAAGCAAAG+TGG - chr2_3:38815356-38815375 Msa0290850:intron 30.0%
TAAGCATGAGTAAGTATAGT+AGG + chr2_3:38815448-38815467 None:intergenic 30.0%
GATTCCACATTCATTCAAAA+TGG - chr2_3:38815474-38815493 Msa0290850:intron 30.0%
! TCTTCCATTTTGAATGAATG+TGG + chr2_3:38815481-38815500 None:intergenic 30.0%
TTCATTCAAAATGGAAGACT+TGG - chr2_3:38815483-38815502 Msa0290850:intron 30.0%
AACTTACTTTATATGTTCCG+AGG + chr2_3:38815573-38815592 None:intergenic 30.0%
!!! CTCTTTTTCACGCTTTAAAA+AGG + chr2_3:38815665-38815684 None:intergenic 30.0%
! TTTAAAGCGTGAAAAAGAGA+CGG - chr2_3:38815666-38815685 Msa0290850:CDS 30.0%
! ATGTAGCATTGAATTGACTT+TGG + chr2_3:38815700-38815719 None:intergenic 30.0%
AAACAATCAATACACCAACA+AGG + chr2_3:38815991-38816010 None:intergenic 30.0%
!! GGTTTGTTAATTCTCTTCGT+TGG + chr2_3:38812537-38812556 None:intergenic 35.0%
!! AACAGGTGGAAGCATATTTT+TGG + chr2_3:38812684-38812703 None:intergenic 35.0%
! GAATCCTTCTTTTTAACAGG+TGG + chr2_3:38812698-38812717 None:intergenic 35.0%
AGGATTCTACTCAAGCATTA+TGG - chr2_3:38812711-38812730 Msa0290850:CDS 35.0%
TGATCATAGGTCCAAATTGA+TGG + chr2_3:38812833-38812852 None:intergenic 35.0%
ATTGATGTATTGCAAAGGCT+TGG - chr2_3:38813417-38813436 Msa0290850:intron 35.0%
CATGGTTATGATATATCCAC+AGG - chr2_3:38813561-38813580 Msa0290850:CDS 35.0%
CTTATAGATTCAATGACCTG+TGG + chr2_3:38813580-38813599 None:intergenic 35.0%
TATTCAACCTCAATCACAGT+CGG + chr2_3:38813661-38813680 None:intergenic 35.0%
TCTCTTGCTTCATCCAATAT+AGG + chr2_3:38813880-38813899 None:intergenic 35.0%
AGCACCTTGATGTATACTTA+AGG + chr2_3:38814125-38814144 None:intergenic 35.0%
AAGGAACTGATACTTGAAGT+TGG + chr2_3:38814150-38814169 None:intergenic 35.0%
AACATTACATGTTCACGTTG+TGG - chr2_3:38814174-38814193 Msa0290850:intron 35.0%
TTGGGTATATTTGAAGATGG+TGG - chr2_3:38814590-38814609 Msa0290850:CDS 35.0%
TGGTGGAAAAGAACTAAACT+TGG - chr2_3:38814607-38814626 Msa0290850:CDS 35.0%
GAGACAATTTATGCTTTGCA+AGG - chr2_3:38814629-38814648 Msa0290850:CDS 35.0%
! GATTGGTTGAGAACTTTGTT+TGG - chr2_3:38814656-38814675 Msa0290850:CDS 35.0%
ATCGTACACATCATCAATGA+TGG + chr2_3:38814755-38814774 None:intergenic 35.0%
TCTTCACAAAAGCAGTTGAT+AGG - chr2_3:38814803-38814822 Msa0290850:intron 35.0%
!!! TTTTCAGGTATGGAGTGATA+TGG + chr2_3:38815033-38815052 None:intergenic 35.0%
!!! TAATGCTTACCGCTTTTTTC+AGG + chr2_3:38815048-38815067 None:intergenic 35.0%
CATTCTCTAAGTATTCTCCA+AGG + chr2_3:38815405-38815424 None:intergenic 35.0%
GAGAATACTTAGAGAATGCA+TGG - chr2_3:38815407-38815426 Msa0290850:intron 35.0%
AAGTATAGTAGGTGCACTTA+TGG + chr2_3:38815437-38815456 None:intergenic 35.0%
TGCTGAAAGCCTAATTATGT+TGG + chr2_3:38815527-38815546 None:intergenic 35.0%
TTAAAGCGTGAAAAAGAGAC+GGG - chr2_3:38815667-38815686 Msa0290850:CDS 35.0%
CAATGCTACATGAATGAAAC+TGG - chr2_3:38815709-38815728 Msa0290850:CDS 35.0%
AGTCCATGATGTTTATAGAG+TGG - chr2_3:38815764-38815783 Msa0290850:CDS 35.0%
CTTCCACTCTATAAACATCA+TGG + chr2_3:38815770-38815789 None:intergenic 35.0%
TAAACAATGCCATTCTAGCA+TGG + chr2_3:38815855-38815874 None:intergenic 35.0%
GCATTGTTTATGTATCATCG+TGG - chr2_3:38815865-38815884 Msa0290850:CDS 35.0%
TTTATGTATCATCGTGGAGA+TGG - chr2_3:38815871-38815890 Msa0290850:CDS 35.0%
TTTCAGGATCTTGAATGGTA+TGG + chr2_3:38815897-38815916 None:intergenic 35.0%
CTGAATTTCAGGATCTTGAA+TGG + chr2_3:38815902-38815921 None:intergenic 35.0%
GCAATTCGATTCTGAATTTC+AGG + chr2_3:38815913-38815932 None:intergenic 35.0%
AGGAAAACAAGAAATCCCCA+CGG - chr2_3:38812586-38812605 Msa0290850:CDS 40.0%
! AATTTGGTTAGTTCTCCGTG+GGG + chr2_3:38812604-38812623 None:intergenic 40.0%
! CAATTTGGTTAGTTCTCCGT+GGG + chr2_3:38812605-38812624 None:intergenic 40.0%
! ACAATTTGGTTAGTTCTCCG+TGG + chr2_3:38812606-38812625 None:intergenic 40.0%
GCTTCCACCTGTTAAAAAGA+AGG - chr2_3:38812691-38812710 Msa0290850:CDS 40.0%
!! TTGAGTTGAACGAGGGAAAT+TGG + chr2_3:38812741-38812760 None:intergenic 40.0%
! CATAGGTCCAAATTGATGGT+TGG + chr2_3:38812829-38812848 None:intergenic 40.0%
TATCTTTCCGACTGTGATTG+AGG - chr2_3:38813651-38813670 Msa0290850:intron 40.0%
! TTTGGAACATCCACTGCATT+GGG - chr2_3:38813975-38813994 Msa0290850:intron 40.0%
ATGCTTTGCAAGGGATAGAT+TGG - chr2_3:38814639-38814658 Msa0290850:CDS 40.0%
! TGAGAACTTTGTTTGGACTG+TGG - chr2_3:38814663-38814682 Msa0290850:CDS 40.0%
! GAGAACTTTGTTTGGACTGT+GGG - chr2_3:38814664-38814683 Msa0290850:CDS 40.0%
GATGATGTGTACGATGTGTA+TGG - chr2_3:38814760-38814779 Msa0290850:intron 40.0%
TAGATGGGATCTAAATGCCA+TGG - chr2_3:38814916-38814935 Msa0290850:intron 40.0%
CACTCCATACCTGAAAAAAG+CGG - chr2_3:38815036-38815055 Msa0290850:CDS 40.0%
!!! CTTACCGCTTTTTTCAGGTA+TGG + chr2_3:38815043-38815062 None:intergenic 40.0%
TCTAAGTATTCTCCAAGGCT+TGG + chr2_3:38815400-38815419 None:intergenic 40.0%
TGCTGTAAACCATGCTAGAA+TGG - chr2_3:38815843-38815862 Msa0290850:CDS 40.0%
!! CCTTGCATTGAGTTGAACGA+GGG + chr2_3:38812748-38812767 None:intergenic 45.0%
!! ACCTTGCATTGAGTTGAACG+AGG + chr2_3:38812749-38812768 None:intergenic 45.0%
CACTTGAGTTCAGACTCTTG+AGG - chr2_3:38813535-38813554 Msa0290850:CDS 45.0%
TTCAGACTCTTGAGGCAACA+TGG - chr2_3:38813543-38813562 Msa0290850:CDS 45.0%
!! CTTTGGAACATCCACTGCAT+TGG - chr2_3:38813974-38813993 Msa0290850:intron 45.0%
TTGGAACATCCACTGCATTG+GGG - chr2_3:38813976-38813995 Msa0290850:intron 45.0%
GTACGATGTGTATGGCACAT+TGG - chr2_3:38814768-38814787 Msa0290850:intron 45.0%
GTAGTTTGGGAGAGAATCCA+TGG + chr2_3:38814936-38814955 None:intergenic 45.0%
GAAGCAAAGTGGTACCATAG+TGG - chr2_3:38815367-38815386 Msa0290850:intron 45.0%
TTACGCCTTGCTAATGACCT+CGG - chr2_3:38815553-38815572 Msa0290850:intron 45.0%
ATGTTCCGAGGTCATTAGCA+AGG + chr2_3:38815561-38815580 None:intergenic 45.0%
!! AACTGGAGCTTCTGAAGTTG+AGG - chr2_3:38815726-38815745 Msa0290850:CDS 45.0%
!! AAAAAATAAAATTTGATAAA+TGG + chr2_3:38813215-38813234 None:intergenic 5.0%
!! TATTATTATTATTATTATAG+TGG - chr2_3:38815317-38815336 Msa0290850:intron 5.0%
CCCTCGTTCAACTCAATGCA+AGG - chr2_3:38812745-38812764 Msa0290850:CDS 50.0%
! GAGTCTGAACTCAAGTGCTG+TGG + chr2_3:38813532-38813551 None:intergenic 50.0%
!! AGGTCGGTTTGTTGACGTTG+AGG - chr2_3:38813807-38813826 Msa0290850:CDS 50.0%
!! GGTCGGTTTGTTGACGTTGA+GGG - chr2_3:38813808-38813827 Msa0290850:CDS 50.0%
!! GGCTTGGTGTGTATCCACTA+TGG + chr2_3:38815384-38815403 None:intergenic 50.0%
AGTGGATACACACCAAGCCT+TGG - chr2_3:38815385-38815404 Msa0290850:intron 50.0%
TGCATTGGGGAGTCCCTCGA+TGG - chr2_3:38813989-38814008 Msa0290850:intron 60.0%
GCATTGGGGAGTCCCTCGAT+GGG - chr2_3:38813990-38814009 Msa0290850:intron 60.0%
ACCACCTAGCCTCCCATCGA+GGG + chr2_3:38814005-38814024 None:intergenic 60.0%
AACCACCTAGCCTCCCATCG+AGG + chr2_3:38814006-38814025 None:intergenic 60.0%
CGAGGGACTCCCCAATGCAG+TGG + chr2_3:38813988-38814007 None:intergenic 65.0%
TTGGGGAGTCCCTCGATGGG+AGG - chr2_3:38813993-38814012 Msa0290850:intron 65.0%
GAGTCCCTCGATGGGAGGCT+AGG - chr2_3:38813998-38814017 Msa0290850:intron 65.0%
TCCCTCGATGGGAGGCTAGG+TGG - chr2_3:38814001-38814020 Msa0290850:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 38812470 38816063 38812470 ID=Msa0290850;Name=Msa0290850
chr2_3 mRNA 38812470 38816063 38812470 ID=Msa0290850-mRNA-1;Parent=Msa0290850;Name=Msa0290850-mRNA-1;_AED=0.09;_eAED=0.09;_QI=105|1|1|1|0.85|0.75|8|85|596
chr2_3 exon 38812470 38812860 38812470 ID=Msa0290850-mRNA-1:exon:12610;Parent=Msa0290850-mRNA-1
chr2_3 exon 38812948 38813196 38812948 ID=Msa0290850-mRNA-1:exon:12609;Parent=Msa0290850-mRNA-1
chr2_3 exon 38813476 38813614 38813476 ID=Msa0290850-mRNA-1:exon:12608;Parent=Msa0290850-mRNA-1
chr2_3 exon 38813709 38813927 38813709 ID=Msa0290850-mRNA-1:exon:12607;Parent=Msa0290850-mRNA-1
chr2_3 exon 38814394 38814769 38814394 ID=Msa0290850-mRNA-1:exon:12606;Parent=Msa0290850-mRNA-1
chr2_3 exon 38814951 38815212 38814951 ID=Msa0290850-mRNA-1:exon:12605;Parent=Msa0290850-mRNA-1
chr2_3 exon 38815653 38815924 38815653 ID=Msa0290850-mRNA-1:exon:12604;Parent=Msa0290850-mRNA-1
chr2_3 exon 38815991 38816063 38815991 ID=Msa0290850-mRNA-1:exon:12603;Parent=Msa0290850-mRNA-1
chr2_3 five_prime_UTR 38815991 38816063 38815991 ID=Msa0290850-mRNA-1:five_prime_utr;Parent=Msa0290850-mRNA-1
chr2_3 five_prime_UTR 38815893 38815924 38815893 ID=Msa0290850-mRNA-1:five_prime_utr;Parent=Msa0290850-mRNA-1
chr2_3 CDS 38815653 38815892 38815653 ID=Msa0290850-mRNA-1:cds;Parent=Msa0290850-mRNA-1
chr2_3 CDS 38814951 38815212 38814951 ID=Msa0290850-mRNA-1:cds;Parent=Msa0290850-mRNA-1
chr2_3 CDS 38814394 38814769 38814394 ID=Msa0290850-mRNA-1:cds;Parent=Msa0290850-mRNA-1
chr2_3 CDS 38813709 38813927 38813709 ID=Msa0290850-mRNA-1:cds;Parent=Msa0290850-mRNA-1
chr2_3 CDS 38813476 38813614 38813476 ID=Msa0290850-mRNA-1:cds;Parent=Msa0290850-mRNA-1
chr2_3 CDS 38812948 38813196 38812948 ID=Msa0290850-mRNA-1:cds;Parent=Msa0290850-mRNA-1
chr2_3 CDS 38812555 38812860 38812555 ID=Msa0290850-mRNA-1:cds;Parent=Msa0290850-mRNA-1
chr2_3 three_prime_UTR 38812470 38812554 38812470 ID=Msa0290850-mRNA-1:three_prime_utr;Parent=Msa0290850-mRNA-1
Gene Sequence

>Msa0290850

ATGTCTTTCCCTATATTTGGAACTCTTCCATTTAGCTTTACCAAAAATATGCTTCCACCTGTTAAAAAGAAGGATTCTACTCAAGCATTATGGAACTCCAATTTCCCTCGTTCAACTCAATGCAAGGTATCATATATGGATGCAAAAGATTATAGTCAAACAATTACTCGTCGATTTGCTAATTTCCAACCATCAATTTGGACCTATGATCATATACAGTCATTAACTAGTGAATATAAGGAAGTAATATTGCACACAAAGCAATGCTCAATTCTAAAGGAGAAAGTAAGAATGATGCTTAACAAAACGGAAAATAAGCTTGGTCAACTTGAGCTTATTGATGTATTGCAAAGGCTTGGAGTGTCTTACCATTTTAACAATGAAATTAGGGACATATTGGATAACATTTACGACAAACAAACATCCAAAATGAAGAAGAATTTACATGCCACAGCACTTGAGTTCAGACTCTTGAGGCAACATGGTTATGATATATCCACAGATATTTTTGTTTGCTTTAAAGATGAAATATGTAACTTTAAAAAAGGTCGGTTTGTTGACGTTGAGGGAATGTTATCATTGTATGAAGCGTCGTTTCATTCATTTGAAGATGAACCTATATTGGATGAAGCAAGAGATGTCACATCAAAGTTTCTCAAAGAATTTTTCGACCAAAATGAAGATAAGAACGTATCACTTCAAATAAGTCATGCTTTGGAACATCCACTGCATTGGGGAGTCCCTCGATGGGAGGCTAGGTGGTTCATTGATATATACGAAAGACAACAAAATAAGAATCATGTTTTACTTGAATTTGCTAAATTGGATTTCAACATTCTTCAAAGCTTCTACCAAGAAGACCTTAAGTATACATCAAGATGGTGGAAAAGAACTAAACTTGGAGACAATTTATGCTTTGCAAGGGATAGATTGGTTGAGAACTTTGTTTGGACTGTGGGAACAAATTTCAAACCAGATTTTAAATATTTACGAAAAGTTATGACAAAGGTCAATTCCTTAATTACCATCATTGATGATGTGTACGATGTGTATGGCACATTGGAAGAACTAGAGCTCTTCACAAAAGCAGTTGATAGATGGGATCTAAATGCCATGGATTCTCTCCCAAACTACATGAAAATATGCTTTCATGCACTCTATAACTTTGTGAGTGAACTTGCTTTTGAAACTTTGAAAAAGTGTGGCTACCATATCACTCCATACCTGAAAAAAGCGTGGACAGATCTATGTAAATCATATTTGATTGAAGCAAAGTGGTACCATAGTGGATACACACCAAGCCTTGGAGAATACTTAGAGAATGCATGGATTTCCATAAGTGCACCTACTATACTTACTCATGCTTACTTTGTGATTCCACATTCATTCAAAATGGAAGACTTGGTTAGTTTAGAAGAAAACTCCAACATAATTAGGCTTTCAGCAATAATTTTACGCCTTGCTAATGACCTCGGAACATATAAACGTGAAAAAGAGACGGGTGATATTCCAAAGTCAATTCAATGCTACATGAATGAAACTGGAGCTTCTGAAGTTGAGGCTTGTGAGTATGTTAAGTCCATGATGTTTATAGAGTGGAAGAAGTTGAATAAAGAAGCTCATAGTTCATCTTTTTCTCAATGTTTCATAGATACTGCTGTAAACCATGCTAGAATGGCATTGTTTATGTATCATCGTGGAGATGGCCATACCATTCAAGATCCTGAAATTCAGAATCGAATTGCATCATTAGTTTTTCAGCCTATTCCTATTTTATGTACAAAACATTAA
Protein sequence

>Msa0290850

MSFPIFGTLPFSFTKNMLPPVKKKDSTQALWNSNFPRSTQCKVSYMDAKDYSQTITRRFANFQPSIWTYDHIQSLTSEYKEVILHTKQCSILKEKVRMMLNKTENKLGQLELIDVLQRLGVSYHFNNEIRDILDNIYDKQTSKMKKNLHATALEFRLLRQHGYDISTDIFVCFKDEICNFKKGRFVDVEGMLSLYEASFHSFEDEPILDEARDVTSKFLKEFFDQNEDKNVSLQISHALEHPLHWGVPRWEARWFIDIYERQQNKNHVLLEFAKLDFNILQSFYQEDLKYTSRWWKRTKLGDNLCFARDRLVENFVWTVGTNFKPDFKYLRKVMTKVNSLITIIDDVYDVYGTLEELELFTKAVDRWDLNAMDSLPNYMKICFHALYNFVSELAFETLKKCGYHITPYLKKAWTDLCKSYLIEAKWYHSGYTPSLGEYLENAWISISAPTILTHAYFVIPHSFKMEDLVSLEENSNIIRLSAIILRLANDLGTYKREKETGDIPKSIQCYMNETGASEVEACEYVKSMMFIEWKKLNKEAHSSSFSQCFIDTAVNHARMALFMYHRGDGHTIQDPEIQNRIASLVFQPIPILCTKH*