Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690480 | XP_003607334.1 | 95.673 | 624 | 26 | 1 | 1 | 624 | 1 | 623 | 0.0 | 1198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690480 | G7JQM9 | 95.673 | 624 | 26 | 1 | 1 | 624 | 1 | 623 | 0.0 | 1198 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011720 | Msa0690480 | 0.800417 | 1.455281e-48 | -8.615850e-47 |
| Msa0094100 | Msa0690480 | 0.800659 | 1.299231e-48 | -8.615850e-47 |
| Msa0105340 | Msa0690480 | 0.801149 | 1.032028e-48 | -8.615850e-47 |
| Msa0607470 | Msa0690480 | 0.915033 | 9.507856e-85 | -8.615850e-47 |
| Msa0610590 | Msa0690480 | 0.815194 | 1.047578e-51 | -8.615850e-47 |
| Msa0647770 | Msa0690480 | 0.875168 | 3.812351e-68 | -8.615850e-47 |
| Msa0651190 | Msa0690480 | 0.802321 | 5.931048e-49 | -8.615850e-47 |
| Msa0690480 | Msa0788710 | 0.811068 | 8.420719e-51 | -8.615850e-47 |
| Msa0690480 | Msa0908170 | 0.805441 | 1.332883e-49 | -8.615850e-47 |
| Msa0690480 | Msa0910980 | -0.800198 | 1.612916e-48 | -8.615850e-47 |
| Msa0690480 | Msa1026760 | 0.804387 | 2.213828e-49 | -8.615850e-47 |
| Msa0690480 | Msa1026790 | 0.805259 | 1.455259e-49 | -8.615850e-47 |
| Msa0690480 | Msa1172670 | 0.803885 | 2.814947e-49 | -8.615850e-47 |
| Msa0690480 | Msa1205130 | 0.807452 | 5.019043e-50 | -8.615850e-47 |
| Msa0690480 | Msa1340020 | 0.802016 | 6.852317e-49 | -8.615850e-47 |
| Msa0690480 | Msa1365040 | -0.810202 | 1.296133e-50 | -8.615850e-47 |
| Msa0690480 | Msa1445790 | 0.802831 | 4.653868e-49 | -8.615850e-47 |
| Msa0690480 | Msa1457670 | -0.810803 | 9.610765e-51 | -8.615850e-47 |
| Msa0184020 | Msa0690480 | 0.808478 | 3.037357e-50 | -8.615850e-47 |
| Msa0188630 | Msa0690480 | 0.801834 | 7.468400e-49 | -8.615850e-47 |
| Msa0230770 | Msa0690480 | 0.812725 | 3.668710e-51 | -8.615850e-47 |
| Msa0430820 | Msa0690480 | 0.812757 | 3.610948e-51 | -8.615850e-47 |
| Msa0270270 | Msa0690480 | 0.820275 | 7.475162e-53 | -8.615850e-47 |
| Msa0296760 | Msa0690480 | 0.807694 | 4.460180e-50 | -8.615850e-47 |
| Msa0578970 | Msa0690480 | 0.812927 | 3.314220e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690480 | MtrunA17_Chr4g0039101 | 95.673 | 624 | 26 | 1 | 1 | 624 | 1 | 623 | 0.0 | 1198 |
| Msa0690480 | MtrunA17_Chr4g0039111 | 67.453 | 636 | 162 | 4 | 1 | 624 | 1 | 603 | 0.0 | 805 |
| Msa0690480 | MtrunA17_Chr4g0039091 | 80.000 | 85 | 17 | 0 | 536 | 620 | 1 | 85 | 8.73e-40 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690480 | AT2G43250.1 | 47.988 | 646 | 285 | 9 | 1 | 620 | 2 | 622 | 0.0 | 558 |
Find 137 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAGAGAGAATGTAAATT+AGG | 0.180028 | 4_4:+58306632 | None:intergenic |
| TAGAATAGCTTTAAATAATA+AGG | 0.205721 | 4_4:-58305801 | Msa0690480:CDS |
| TTGCCTTGGGCTACATTTGC+AGG | 0.246779 | 4_4:-58305155 | Msa0690480:CDS |
| TGGAGAATGGCCATAGGTTT+TGG | 0.259479 | 4_4:+58306767 | None:intergenic |
| CAATGGCGATTACGTTTCTA+TGG | 0.293232 | 4_4:-58306795 | Msa0690480:CDS |
| TTGGTACCTACTTCTTCTTT+TGG | 0.293805 | 4_4:-58306484 | Msa0690480:CDS |
| GTAAATTAGGGATTGGGAAT+TGG | 0.294193 | 4_4:+58306645 | None:intergenic |
| TAAATTAGGGATTGGGAATT+GGG | 0.304149 | 4_4:+58306646 | None:intergenic |
| AGCGTGTTGGCTTCTTGCCT+TGG | 0.305380 | 4_4:-58305169 | Msa0690480:CDS |
| AGAAGAGAGAATGTAAATTA+GGG | 0.323524 | 4_4:+58306633 | None:intergenic |
| AGAATAGCTTTAAATAATAA+GGG | 0.336252 | 4_4:-58305800 | Msa0690480:CDS |
| TTTCGATGAATAAAGATGTT+AGG | 0.339563 | 4_4:-58306129 | Msa0690480:CDS |
| GGTTGAGTTCTCGGAGCTTC+CGG | 0.343906 | 4_4:-58305735 | Msa0690480:CDS |
| ACAATCTCTTTAACATCATT+AGG | 0.344234 | 4_4:+58305584 | None:intergenic |
| AGAGGATTTGAGGGAGTTGT+TGG | 0.351815 | 4_4:+58306735 | None:intergenic |
| GGTAGTAGTGATAATAATTC+TGG | 0.352463 | 4_4:-58306241 | Msa0690480:CDS |
| TTACGGATTCTGACGGTAAA+GGG | 0.353035 | 4_4:-58305550 | Msa0690480:CDS |
| ACGAACTGTTTGGTTTGGTT+AGG | 0.360820 | 4_4:+58306685 | None:intergenic |
| TTGAATTCCACGACCCAAAC+TGG | 0.363401 | 4_4:+58305046 | None:intergenic |
| TACAACTATTGTGAATAGTT+TGG | 0.365489 | 4_4:-58306191 | Msa0690480:CDS |
| TTGGTTAGGGATGTTGAGTT+TGG | 0.367560 | 4_4:+58306699 | None:intergenic |
| GTCTGTTTCGGAGGTGGGTT+CGG | 0.369465 | 4_4:-58306041 | Msa0690480:CDS |
| GGCAAGTAAGGTTGAGTTCT+CGG | 0.381718 | 4_4:-58305744 | Msa0690480:CDS |
| TTGTTTCTCTATTGATCCCT+TGG | 0.385155 | 4_4:+58304933 | None:intergenic |
| CGAAAACGAACTGTTTGGTT+TGG | 0.390875 | 4_4:+58306680 | None:intergenic |
| GCGTGTTGGCTTCTTGCCTT+GGG | 0.393108 | 4_4:-58305168 | Msa0690480:CDS |
| CCTAGGTCCTTCTAATACAT+CGG | 0.396726 | 4_4:-58305324 | Msa0690480:CDS |
| CGAACTGTTTGGTTTGGTTA+GGG | 0.398115 | 4_4:+58306686 | None:intergenic |
| AGTATAATCTTGAGTGAAGT+TGG | 0.406969 | 4_4:+58305377 | None:intergenic |
| CGAGTTGTTGAGAGGATTTG+AGG | 0.408533 | 4_4:+58306725 | None:intergenic |
| AATGATGTTAAAGAGATTGT+TGG | 0.410713 | 4_4:-58305581 | Msa0690480:CDS |
| GGTGCTGTTATTGTTCAATC+TGG | 0.411054 | 4_4:-58306550 | Msa0690480:CDS |
| CCGTCGATGGGGAAGGCGTT+GGG | 0.411272 | 4_4:-58305923 | Msa0690480:CDS |
| CTAGGTCCTTCTAATACATC+GGG | 0.413494 | 4_4:-58305323 | Msa0690480:CDS |
| ATTCTTGTTCAATCGCCGTT+AGG | 0.414808 | 4_4:-58306310 | Msa0690480:CDS |
| AGGTGTTTCCAAGGCAAGTA+AGG | 0.421393 | 4_4:-58305756 | Msa0690480:CDS |
| AGAGAATGTAAATTAGGGAT+TGG | 0.424401 | 4_4:+58306638 | None:intergenic |
| GAGTTGTTGAGAGGATTTGA+GGG | 0.428852 | 4_4:+58306726 | None:intergenic |
| CAGCAGCAAGTTGCTTCGAT+TGG | 0.429335 | 4_4:-58306163 | Msa0690480:CDS |
| GAGAATGTAAATTAGGGATT+GGG | 0.430082 | 4_4:+58306639 | None:intergenic |
| AGAGGGTTTATCTAGCTATA+TGG | 0.430128 | 4_4:-58306095 | Msa0690480:CDS |
| GAACTCAACCTTACTTGCCT+TGG | 0.433204 | 4_4:+58305748 | None:intergenic |
| AAAAGCGAAAACGAACTGTT+TGG | 0.437543 | 4_4:+58306675 | None:intergenic |
| CCGTTAGGGAATTCATGTTT+CGG | 0.440138 | 4_4:-58306295 | Msa0690480:CDS |
| ATAAACCTGTAGTTGCAGTT+GGG | 0.440694 | 4_4:-58305487 | Msa0690480:CDS |
| CCTGTAGTTGCAGTTGGGGC+TGG | 0.444774 | 4_4:-58305482 | Msa0690480:CDS |
| GAGGATTTGAGGGAGTTGTT+GGG | 0.445669 | 4_4:+58306736 | None:intergenic |
| GATTGTTGGAGATTTAATTA+CGG | 0.453221 | 4_4:-58305567 | Msa0690480:CDS |
| TGTTAGGATGGTGTTGGCAG+AGG | 0.460756 | 4_4:-58306113 | Msa0690480:CDS |
| AAACAAGTGTTTCAGCTATG+AGG | 0.463234 | 4_4:-58305229 | Msa0690480:CDS |
| AAATGAGTCTGTTTCGGAGG+TGG | 0.463927 | 4_4:-58306047 | Msa0690480:CDS |
| ATGAAACCCGATGTATTAGA+AGG | 0.464559 | 4_4:+58305317 | None:intergenic |
| TTCTTGTTCAATCGCCGTTA+GGG | 0.466273 | 4_4:-58306309 | Msa0690480:CDS |
| TATTCACAATAGTTGTAAAA+CGG | 0.466843 | 4_4:+58306197 | None:intergenic |
| ATTACGGATTCTGACGGTAA+AGG | 0.467597 | 4_4:-58305551 | Msa0690480:CDS |
| GTCACAAGTGCTGTTTGCTC+AGG | 0.471429 | 4_4:-58305702 | Msa0690480:CDS |
| ACCGTCGATGGGGAAGGCGT+TGG | 0.473777 | 4_4:-58305924 | Msa0690480:CDS |
| AAATTTACGAGAAGCGTCTC+AGG | 0.474706 | 4_4:-58305024 | Msa0690480:CDS |
| TCAATTGCCAGTTTGGGTCG+TGG | 0.475526 | 4_4:-58305053 | Msa0690480:CDS |
| AGCGTCGGAGGAAGAACGTT+CGG | 0.478406 | 4_4:+58306600 | None:intergenic |
| ATGTTGTTGGATGTGAATAG+AGG | 0.480431 | 4_4:-58305887 | Msa0690480:CDS |
| TGATTTACCGTCGATGGGGA+AGG | 0.483308 | 4_4:-58305930 | Msa0690480:CDS |
| AAAGGGGTTAGTTTAAATCA+TGG | 0.486981 | 4_4:-58305533 | Msa0690480:CDS |
| TTAGTACTACCAATCAAAAG+TGG | 0.487428 | 4_4:+58306070 | None:intergenic |
| TAAATCATGGTGACAGGAAG+CGG | 0.488492 | 4_4:-58305520 | Msa0690480:CDS |
| GATAAACCTGTAGTTGCAGT+TGG | 0.489376 | 4_4:-58305488 | Msa0690480:CDS |
| TCTGGTGCAATTGTTGATGC+TGG | 0.489937 | 4_4:-58306223 | Msa0690480:CDS |
| GATAGATATGAAACTGTTGC+TGG | 0.493066 | 4_4:-58306424 | Msa0690480:CDS |
| TTAGTTTAAATCATGGTGAC+AGG | 0.496208 | 4_4:-58305526 | Msa0690480:CDS |
| TTGGGTTTGAATGTGGAGAA+TGG | 0.498077 | 4_4:+58306754 | None:intergenic |
| AATGAGTCTGTTTCGGAGGT+GGG | 0.502900 | 4_4:-58306046 | Msa0690480:CDS |
| CGACCCAAACTGGCAATTGA+GGG | 0.505588 | 4_4:+58305056 | None:intergenic |
| GTTAGGATGGTGTTGGCAGA+GGG | 0.512429 | 4_4:-58306112 | Msa0690480:CDS |
| TATGGAATCTCCAAAACCTA+TGG | 0.515084 | 4_4:-58306777 | Msa0690480:CDS |
| GGCAGCATCGGAACTTGCAC+AGG | 0.522882 | 4_4:-58305134 | Msa0690480:CDS |
| ACGACCCAAACTGGCAATTG+AGG | 0.529521 | 4_4:+58305055 | None:intergenic |
| AGCAACAATAATGATAATCA+TGG | 0.535340 | 4_4:-58306262 | Msa0690480:CDS |
| GGAGTTGTTGGGTTTGAATG+TGG | 0.539028 | 4_4:+58306747 | None:intergenic |
| TAATACATCGGGTTTCATGA+AGG | 0.539186 | 4_4:-58305312 | Msa0690480:CDS |
| GTTGATGCTAGTGCCTTAGC+AGG | 0.539931 | 4_4:-58305635 | Msa0690480:CDS |
| GTCGATTTATCCATTGCTTG+AGG | 0.541045 | 4_4:-58305972 | Msa0690480:CDS |
| CCAGCCCCAACTGCAACTAC+AGG | 0.541510 | 4_4:+58305482 | None:intergenic |
| TCTTTAACATCATTAGGAAG+AGG | 0.544265 | 4_4:+58305590 | None:intergenic |
| GCTACATTTGCAGGCAGCAT+CGG | 0.544965 | 4_4:-58305146 | Msa0690480:CDS |
| AACAAGTGTTTCAGCTATGA+GGG | 0.546847 | 4_4:-58305228 | Msa0690480:CDS |
| GATGAATAAAGATGTTAGGA+TGG | 0.552168 | 4_4:-58306125 | Msa0690480:CDS |
| TAAATCGACTTCGCAAATGC+AGG | 0.553225 | 4_4:+58305986 | None:intergenic |
| CCGATGTATTAGAAGGACCT+AGG | 0.554405 | 4_4:+58305324 | None:intergenic |
| TGTTGTTGGATGTGAATAGA+GGG | 0.556728 | 4_4:-58305886 | Msa0690480:CDS |
| TGTTGAGAAAGGTGTTTCCA+AGG | 0.556731 | 4_4:-58305765 | Msa0690480:CDS |
| AGGAGCATCTTCTCTAACCA+AGG | 0.556826 | 4_4:-58305444 | Msa0690480:CDS |
| CCTTCGTCAGTGTCGACATA+GGG | 0.558095 | 4_4:+58305417 | None:intergenic |
| TAGCAGGTATTAGAAAACAC+TGG | 0.559169 | 4_4:-58305619 | Msa0690480:CDS |
| TGATGCTAGAACTGTTTCTG+AGG | 0.561439 | 4_4:-58305855 | Msa0690480:CDS |
| ATCGAAGCAACTTGCTGCTG+AGG | 0.563278 | 4_4:+58306166 | None:intergenic |
| CAGCATTCTATGAAATAATG+AGG | 0.564757 | 4_4:-58305205 | Msa0690480:CDS |
| TTGCTTCGATTGGTTTGAAG+AGG | 0.566940 | 4_4:-58306153 | Msa0690480:CDS |
| ATGCAGTCGATTGTTGAGAA+AGG | 0.567941 | 4_4:-58305776 | Msa0690480:CDS |
| TCATGTGCAGAAGATGTTGT+TGG | 0.568961 | 4_4:-58305900 | Msa0690480:CDS |
| TCATGTAAATCCTCAAGCAA+TGG | 0.571361 | 4_4:+58305962 | None:intergenic |
| ATTGATGAGTGCGATAGCGT+CGG | 0.571724 | 4_4:+58306585 | None:intergenic |
| GATTTAATTACGGATTCTGA+CGG | 0.573702 | 4_4:-58305557 | Msa0690480:CDS |
| TGATAAGTTTAAAACAATTG+TGG | 0.574714 | 4_4:-58305663 | Msa0690480:CDS |
| TAAACAGAATAACAAAGCCA+AGG | 0.575384 | 4_4:-58304950 | Msa0690480:CDS |
| CTCATCAATGAAATCAAACC+TGG | 0.577587 | 4_4:-58306571 | Msa0690480:CDS |
| TTTGGAAACGAGTTGTTGAG+AGG | 0.579295 | 4_4:+58306717 | None:intergenic |
| GCTGTTATTGTTCAATCTGG+TGG | 0.581680 | 4_4:-58306547 | Msa0690480:CDS |
| GACCCAAACTGGCAATTGAG+GGG | 0.581848 | 4_4:+58305057 | None:intergenic |
| ACCTTCGTCAGTGTCGACAT+AGG | 0.582109 | 4_4:+58305416 | None:intergenic |
| AAGATTAGAGCCGTTACTCA+CGG | 0.584256 | 4_4:-58305272 | Msa0690480:CDS |
| TGAGTTCTCGGAGCTTCCGG+TGG | 0.585469 | 4_4:-58305732 | Msa0690480:CDS |
| ATAACACCAAAAGAAGAAGT+AGG | 0.586648 | 4_4:+58306478 | None:intergenic |
| TAAACCTGTAGTTGCAGTTG+GGG | 0.587810 | 4_4:-58305486 | Msa0690480:CDS |
| GATGAGTGCGATAGCGTCGG+AGG | 0.588491 | 4_4:+58306588 | None:intergenic |
| CGATGTATTAGAAGGACCTA+GGG | 0.590121 | 4_4:+58305325 | None:intergenic |
| AAGCGAAAGATGCAGCGTGT+TGG | 0.593479 | 4_4:-58305182 | Msa0690480:CDS |
| ACTTGTGACTTGTCATCCAC+CGG | 0.593933 | 4_4:+58305716 | None:intergenic |
| GTATATAACACCGTGAGTAA+CGG | 0.594372 | 4_4:+58305262 | None:intergenic |
| GAATAGCTTTAAATAATAAG+GGG | 0.595173 | 4_4:-58305799 | Msa0690480:CDS |
| TGAATGTGGAGAATGGCCAT+AGG | 0.601933 | 4_4:+58306761 | None:intergenic |
| AGCAGGTATTAGAAAACACT+GGG | 0.604153 | 4_4:-58305618 | Msa0690480:CDS |
| CAGGCAGTGATGCAGACAGA+AGG | 0.606093 | 4_4:-58305005 | Msa0690480:CDS |
| CTGCCTGCAAATGTAGCCCA+AGG | 0.610402 | 4_4:+58305152 | None:intergenic |
| GATTGAACAATAACAGCACC+AGG | 0.612363 | 4_4:+58306553 | None:intergenic |
| TACGGATTCTGACGGTAAAG+GGG | 0.615997 | 4_4:-58305549 | Msa0690480:CDS |
| AAAGTACTGAGTGTTTCCCT+AGG | 0.630981 | 4_4:-58305341 | Msa0690480:CDS |
| AAACAGAATAACAAAGCCAA+GGG | 0.634684 | 4_4:-58304949 | Msa0690480:CDS |
| TAAAGATGTTAGGATGGTGT+TGG | 0.637908 | 4_4:-58306119 | Msa0690480:CDS |
| CCGAAACATGAATTCCCTAA+CGG | 0.639732 | 4_4:+58306295 | None:intergenic |
| ACCCAAACTGGCAATTGAGG+GGG | 0.640771 | 4_4:+58305058 | None:intergenic |
| CCCAACGCCTTCCCCATCGA+CGG | 0.643142 | 4_4:+58305923 | None:intergenic |
| TGACAGGAAGCGGTTGCTAG+CGG | 0.648173 | 4_4:-58305510 | Msa0690480:CDS |
| CCCTATGTCGACACTGACGA+AGG | 0.675430 | 4_4:-58305417 | Msa0690480:CDS |
| GTTGTTGGATGTGAATAGAG+GGG | 0.678534 | 4_4:-58305885 | Msa0690480:CDS |
| TGTCGACATAGGGACTACCT+TGG | 0.686794 | 4_4:+58305427 | None:intergenic |
| CGGAGGAAGAACGTTCGGAG+AGG | 0.692446 | 4_4:+58306605 | None:intergenic |
| TTTCTGATTTACCGTCGATG+GGG | 0.704952 | 4_4:-58305934 | Msa0690480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGAATAGCTTTAAATAATA+AGG | - | chr4_4:58305933-58305952 | Msa0690480:CDS | 15.0% |
| !!! | AGAATAGCTTTAAATAATAA+GGG | - | chr4_4:58305934-58305953 | Msa0690480:CDS | 15.0% |
| !!! | TAGAATAGCTTTAAATAATA+AGG | - | chr4_4:58305933-58305952 | Msa0690480:CDS | 15.0% |
| !!! | AGAATAGCTTTAAATAATAA+GGG | - | chr4_4:58305934-58305953 | Msa0690480:CDS | 15.0% |
| !! | TATTCACAATAGTTGTAAAA+CGG | + | chr4_4:58305540-58305559 | None:intergenic | 20.0% |
| !!! | GAATAGCTTTAAATAATAAG+GGG | - | chr4_4:58305935-58305954 | Msa0690480:CDS | 20.0% |
| !!! | TGATAAGTTTAAAACAATTG+TGG | - | chr4_4:58306071-58306090 | Msa0690480:CDS | 20.0% |
| !! | TATTCACAATAGTTGTAAAA+CGG | + | chr4_4:58305540-58305559 | None:intergenic | 20.0% |
| !!! | GAATAGCTTTAAATAATAAG+GGG | - | chr4_4:58305935-58305954 | Msa0690480:CDS | 20.0% |
| !!! | TGATAAGTTTAAAACAATTG+TGG | - | chr4_4:58306071-58306090 | Msa0690480:CDS | 20.0% |
| ! | AGAAGAGAGAATGTAAATTA+GGG | + | chr4_4:58305104-58305123 | None:intergenic | 25.0% |
| !! | GGATGAAAAAGATGATATTT+TGG | - | chr4_4:58305231-58305250 | Msa0690480:CDS | 25.0% |
| !!! | CGTTGTTTTGTTGATAAAAT+TGG | - | chr4_4:58305283-58305302 | Msa0690480:CDS | 25.0% |
| !! | TTTGTTCTTAAGGAGATTTT+TGG | - | chr4_4:58305337-58305356 | Msa0690480:CDS | 25.0% |
| ! | AAAAAAGCTGCTAAATTTGT+TGG | - | chr4_4:58305391-58305410 | Msa0690480:CDS | 25.0% |
| ! | AGCAACAATAATGATAATCA+TGG | - | chr4_4:58305472-58305491 | Msa0690480:CDS | 25.0% |
| ! | TACAACTATTGTGAATAGTT+TGG | - | chr4_4:58305543-58305562 | Msa0690480:CDS | 25.0% |
| ! | TTTCGATGAATAAAGATGTT+AGG | - | chr4_4:58305605-58305624 | Msa0690480:CDS | 25.0% |
| ! | TACTAAAAATGAGTCTGTTT+CGG | - | chr4_4:58305681-58305700 | Msa0690480:CDS | 25.0% |
| !!! | GGTTTATTCTTTTAGAATTG+CGG | - | chr4_4:58305900-58305919 | Msa0690480:CDS | 25.0% |
| !!! | TTGTTTTAAACTTATCAGTC+TGG | + | chr4_4:58306068-58306087 | None:intergenic | 25.0% |
| ! | ACAATCTCTTTAACATCATT+AGG | + | chr4_4:58306153-58306172 | None:intergenic | 25.0% |
| ! | AATGATGTTAAAGAGATTGT+TGG | - | chr4_4:58306153-58306172 | Msa0690480:CDS | 25.0% |
| ! | GATTGTTGGAGATTTAATTA+CGG | - | chr4_4:58306167-58306186 | Msa0690480:CDS | 25.0% |
| !!! | CAAGAGATTCTATTGATTTT+TGG | + | chr4_4:58306764-58306783 | None:intergenic | 25.0% |
| ! | AGAAGAGAGAATGTAAATTA+GGG | + | chr4_4:58305104-58305123 | None:intergenic | 25.0% |
| !! | GGATGAAAAAGATGATATTT+TGG | - | chr4_4:58305231-58305250 | Msa0690480:CDS | 25.0% |
| !!! | CGTTGTTTTGTTGATAAAAT+TGG | - | chr4_4:58305283-58305302 | Msa0690480:CDS | 25.0% |
| !! | TTTGTTCTTAAGGAGATTTT+TGG | - | chr4_4:58305337-58305356 | Msa0690480:CDS | 25.0% |
| ! | AAAAAAGCTGCTAAATTTGT+TGG | - | chr4_4:58305391-58305410 | Msa0690480:CDS | 25.0% |
| ! | AGCAACAATAATGATAATCA+TGG | - | chr4_4:58305472-58305491 | Msa0690480:CDS | 25.0% |
| ! | TACAACTATTGTGAATAGTT+TGG | - | chr4_4:58305543-58305562 | Msa0690480:CDS | 25.0% |
| ! | TTTCGATGAATAAAGATGTT+AGG | - | chr4_4:58305605-58305624 | Msa0690480:CDS | 25.0% |
| ! | TACTAAAAATGAGTCTGTTT+CGG | - | chr4_4:58305681-58305700 | Msa0690480:CDS | 25.0% |
| !!! | GGTTTATTCTTTTAGAATTG+CGG | - | chr4_4:58305900-58305919 | Msa0690480:CDS | 25.0% |
| !!! | TTGTTTTAAACTTATCAGTC+TGG | + | chr4_4:58306068-58306087 | None:intergenic | 25.0% |
| ! | ACAATCTCTTTAACATCATT+AGG | + | chr4_4:58306153-58306172 | None:intergenic | 25.0% |
| ! | AATGATGTTAAAGAGATTGT+TGG | - | chr4_4:58306153-58306172 | Msa0690480:CDS | 25.0% |
| ! | GATTGTTGGAGATTTAATTA+CGG | - | chr4_4:58306167-58306186 | Msa0690480:CDS | 25.0% |
| !!! | CAAGAGATTCTATTGATTTT+TGG | + | chr4_4:58306764-58306783 | None:intergenic | 25.0% |
| TAAATTAGGGATTGGGAATT+GGG | + | chr4_4:58305091-58305110 | None:intergenic | 30.0% | |
| GAGAATGTAAATTAGGGATT+GGG | + | chr4_4:58305098-58305117 | None:intergenic | 30.0% | |
| AGAGAATGTAAATTAGGGAT+TGG | + | chr4_4:58305099-58305118 | None:intergenic | 30.0% | |
| GAGAAGAGAGAATGTAAATT+AGG | + | chr4_4:58305105-58305124 | None:intergenic | 30.0% | |
| ! | TTTTTCATCCTCTTCAAAAG+GGG | + | chr4_4:58305221-58305240 | None:intergenic | 30.0% |
| !! | CTTTTTCATCCTCTTCAAAA+GGG | + | chr4_4:58305222-58305241 | None:intergenic | 30.0% |
| !! | TCTTTTTCATCCTCTTCAAA+AGG | + | chr4_4:58305223-58305242 | None:intergenic | 30.0% |
| ATAACACCAAAAGAAGAAGT+AGG | + | chr4_4:58305259-58305278 | None:intergenic | 30.0% | |
| !!! | TTAAGGAGATTTTTGGTACT+GGG | - | chr4_4:58305344-58305363 | Msa0690480:CDS | 30.0% |
| !!! | ATTTTTGGTACTGGGTTTTA+TGG | - | chr4_4:58305352-58305371 | Msa0690480:CDS | 30.0% |
| GGTAGTAGTGATAATAATTC+TGG | - | chr4_4:58305493-58305512 | Msa0690480:CDS | 30.0% | |
| GATGAATAAAGATGTTAGGA+TGG | - | chr4_4:58305609-58305628 | Msa0690480:CDS | 30.0% | |
| !! | TATATGGATCCACTTTTGAT+TGG | - | chr4_4:58305655-58305674 | Msa0690480:CDS | 30.0% |
| TTAGTACTACCAATCAAAAG+TGG | + | chr4_4:58305667-58305686 | None:intergenic | 30.0% | |
| TCTTTAACATCATTAGGAAG+AGG | + | chr4_4:58306147-58306166 | None:intergenic | 30.0% | |
| GATTTAATTACGGATTCTGA+CGG | - | chr4_4:58306177-58306196 | Msa0690480:CDS | 30.0% | |
| !! | AAAGGGGTTAGTTTAAATCA+TGG | - | chr4_4:58306201-58306220 | Msa0690480:CDS | 30.0% |
| TTAGTTTAAATCATGGTGAC+AGG | - | chr4_4:58306208-58306227 | Msa0690480:CDS | 30.0% | |
| AGTATAATCTTGAGTGAAGT+TGG | + | chr4_4:58306360-58306379 | None:intergenic | 30.0% | |
| CAGCATTCTATGAAATAATG+AGG | - | chr4_4:58306529-58306548 | Msa0690480:CDS | 30.0% | |
| TAAACAGAATAACAAAGCCA+AGG | - | chr4_4:58306784-58306803 | Msa0690480:CDS | 30.0% | |
| AAACAGAATAACAAAGCCAA+GGG | - | chr4_4:58306785-58306804 | Msa0690480:CDS | 30.0% | |
| TAAATTAGGGATTGGGAATT+GGG | + | chr4_4:58305091-58305110 | None:intergenic | 30.0% | |
| GAGAATGTAAATTAGGGATT+GGG | + | chr4_4:58305098-58305117 | None:intergenic | 30.0% | |
| AGAGAATGTAAATTAGGGAT+TGG | + | chr4_4:58305099-58305118 | None:intergenic | 30.0% | |
| GAGAAGAGAGAATGTAAATT+AGG | + | chr4_4:58305105-58305124 | None:intergenic | 30.0% | |
| ! | TTTTTCATCCTCTTCAAAAG+GGG | + | chr4_4:58305221-58305240 | None:intergenic | 30.0% |
| !! | CTTTTTCATCCTCTTCAAAA+GGG | + | chr4_4:58305222-58305241 | None:intergenic | 30.0% |
| !! | TCTTTTTCATCCTCTTCAAA+AGG | + | chr4_4:58305223-58305242 | None:intergenic | 30.0% |
| ATAACACCAAAAGAAGAAGT+AGG | + | chr4_4:58305259-58305278 | None:intergenic | 30.0% | |
| !!! | TTAAGGAGATTTTTGGTACT+GGG | - | chr4_4:58305344-58305363 | Msa0690480:CDS | 30.0% |
| !!! | ATTTTTGGTACTGGGTTTTA+TGG | - | chr4_4:58305352-58305371 | Msa0690480:CDS | 30.0% |
| GGTAGTAGTGATAATAATTC+TGG | - | chr4_4:58305493-58305512 | Msa0690480:CDS | 30.0% | |
| GATGAATAAAGATGTTAGGA+TGG | - | chr4_4:58305609-58305628 | Msa0690480:CDS | 30.0% | |
| !! | TATATGGATCCACTTTTGAT+TGG | - | chr4_4:58305655-58305674 | Msa0690480:CDS | 30.0% |
| TTAGTACTACCAATCAAAAG+TGG | + | chr4_4:58305667-58305686 | None:intergenic | 30.0% | |
| TCTTTAACATCATTAGGAAG+AGG | + | chr4_4:58306147-58306166 | None:intergenic | 30.0% | |
| GATTTAATTACGGATTCTGA+CGG | - | chr4_4:58306177-58306196 | Msa0690480:CDS | 30.0% | |
| !! | AAAGGGGTTAGTTTAAATCA+TGG | - | chr4_4:58306201-58306220 | Msa0690480:CDS | 30.0% |
| TTAGTTTAAATCATGGTGAC+AGG | - | chr4_4:58306208-58306227 | Msa0690480:CDS | 30.0% | |
| AGTATAATCTTGAGTGAAGT+TGG | + | chr4_4:58306360-58306379 | None:intergenic | 30.0% | |
| CAGCATTCTATGAAATAATG+AGG | - | chr4_4:58306529-58306548 | Msa0690480:CDS | 30.0% | |
| TAAACAGAATAACAAAGCCA+AGG | - | chr4_4:58306784-58306803 | Msa0690480:CDS | 30.0% | |
| AAACAGAATAACAAAGCCAA+GGG | - | chr4_4:58306785-58306804 | Msa0690480:CDS | 30.0% | |
| TATGGAATCTCCAAAACCTA+TGG | - | chr4_4:58304957-58304976 | Msa0690480:CDS | 35.0% | |
| AAAAGCGAAAACGAACTGTT+TGG | + | chr4_4:58305062-58305081 | None:intergenic | 35.0% | |
| GTAAATTAGGGATTGGGAAT+TGG | + | chr4_4:58305092-58305111 | None:intergenic | 35.0% | |
| CTCATCAATGAAATCAAACC+TGG | - | chr4_4:58305163-58305182 | Msa0690480:CDS | 35.0% | |
| ! | TTGGTACCTACTTCTTCTTT+TGG | - | chr4_4:58305250-58305269 | Msa0690480:CDS | 35.0% |
| GATAGATATGAAACTGTTGC+TGG | - | chr4_4:58305310-58305329 | Msa0690480:CDS | 35.0% | |
| ! | TGCTGGTGATTTTGTTCTTA+AGG | - | chr4_4:58305327-58305346 | Msa0690480:CDS | 35.0% |
| !!! | CTTAAGGAGATTTTTGGTAC+TGG | - | chr4_4:58305343-58305362 | Msa0690480:CDS | 35.0% |
| !!! | GCTTTTTTAGCAGCTAAAAC+AGG | + | chr4_4:58305379-58305398 | None:intergenic | 35.0% |
| TAAAGATGTTAGGATGGTGT+TGG | - | chr4_4:58305615-58305634 | Msa0690480:CDS | 35.0% | |
| AGAGGGTTTATCTAGCTATA+TGG | - | chr4_4:58305639-58305658 | Msa0690480:CDS | 35.0% | |
| TAAAAATGAGTCTGTTTCGG+AGG | - | chr4_4:58305684-58305703 | Msa0690480:CDS | 35.0% | |
| ! | GGTGTATCATAACGAGTTTT+CGG | + | chr4_4:58305730-58305749 | None:intergenic | 35.0% |
| TCATGTAAATCCTCAAGCAA+TGG | + | chr4_4:58305775-58305794 | None:intergenic | 35.0% | |
| ! | TTTTCTGATTTACCGTCGAT+GGG | - | chr4_4:58305799-58305818 | Msa0690480:CDS | 35.0% |
| ATGTTGTTGGATGTGAATAG+AGG | - | chr4_4:58305847-58305866 | Msa0690480:CDS | 35.0% | |
| TGTTGTTGGATGTGAATAGA+GGG | - | chr4_4:58305848-58305867 | Msa0690480:CDS | 35.0% | |
| !!! | TTCTTTTAGAATTGCGGTTG+AGG | - | chr4_4:58305906-58305925 | Msa0690480:CDS | 35.0% |
| !!! | TCTTTTAGAATTGCGGTTGA+GGG | - | chr4_4:58305907-58305926 | Msa0690480:CDS | 35.0% |
| ! | GTGTTTTCTAATACCTGCTA+AGG | + | chr4_4:58306115-58306134 | None:intergenic | 35.0% |
| TAGCAGGTATTAGAAAACAC+TGG | - | chr4_4:58306115-58306134 | Msa0690480:CDS | 35.0% | |
| AGCAGGTATTAGAAAACACT+GGG | - | chr4_4:58306116-58306135 | Msa0690480:CDS | 35.0% | |
| ATAAACCTGTAGTTGCAGTT+GGG | - | chr4_4:58306247-58306266 | Msa0690480:CDS | 35.0% | |
| ATGAAACCCGATGTATTAGA+AGG | + | chr4_4:58306420-58306439 | None:intergenic | 35.0% | |
| TAATACATCGGGTTTCATGA+AGG | - | chr4_4:58306422-58306441 | Msa0690480:CDS | 35.0% | |
| !! | AGTAACGGCTCTAATCTTTT+CGG | + | chr4_4:58306460-58306479 | None:intergenic | 35.0% |
| GTATATAACACCGTGAGTAA+CGG | + | chr4_4:58306475-58306494 | None:intergenic | 35.0% | |
| AAACAAGTGTTTCAGCTATG+AGG | - | chr4_4:58306505-58306524 | Msa0690480:CDS | 35.0% | |
| AACAAGTGTTTCAGCTATGA+GGG | - | chr4_4:58306506-58306525 | Msa0690480:CDS | 35.0% | |
| !! | GATTGCTTTTGTATGGTGAT+GGG | - | chr4_4:58306622-58306641 | Msa0690480:CDS | 35.0% |
| TATGGAATCTCCAAAACCTA+TGG | - | chr4_4:58304957-58304976 | Msa0690480:CDS | 35.0% | |
| AAAAGCGAAAACGAACTGTT+TGG | + | chr4_4:58305062-58305081 | None:intergenic | 35.0% | |
| GTAAATTAGGGATTGGGAAT+TGG | + | chr4_4:58305092-58305111 | None:intergenic | 35.0% | |
| CTCATCAATGAAATCAAACC+TGG | - | chr4_4:58305163-58305182 | Msa0690480:CDS | 35.0% | |
| ! | TTGGTACCTACTTCTTCTTT+TGG | - | chr4_4:58305250-58305269 | Msa0690480:CDS | 35.0% |
| GATAGATATGAAACTGTTGC+TGG | - | chr4_4:58305310-58305329 | Msa0690480:CDS | 35.0% | |
| ! | TGCTGGTGATTTTGTTCTTA+AGG | - | chr4_4:58305327-58305346 | Msa0690480:CDS | 35.0% |
| !!! | CTTAAGGAGATTTTTGGTAC+TGG | - | chr4_4:58305343-58305362 | Msa0690480:CDS | 35.0% |
| !!! | GCTTTTTTAGCAGCTAAAAC+AGG | + | chr4_4:58305379-58305398 | None:intergenic | 35.0% |
| TAAAGATGTTAGGATGGTGT+TGG | - | chr4_4:58305615-58305634 | Msa0690480:CDS | 35.0% | |
| AGAGGGTTTATCTAGCTATA+TGG | - | chr4_4:58305639-58305658 | Msa0690480:CDS | 35.0% | |
| TAAAAATGAGTCTGTTTCGG+AGG | - | chr4_4:58305684-58305703 | Msa0690480:CDS | 35.0% | |
| ! | GGTGTATCATAACGAGTTTT+CGG | + | chr4_4:58305730-58305749 | None:intergenic | 35.0% |
| TCATGTAAATCCTCAAGCAA+TGG | + | chr4_4:58305775-58305794 | None:intergenic | 35.0% | |
| ! | TTTTCTGATTTACCGTCGAT+GGG | - | chr4_4:58305799-58305818 | Msa0690480:CDS | 35.0% |
| ATGTTGTTGGATGTGAATAG+AGG | - | chr4_4:58305847-58305866 | Msa0690480:CDS | 35.0% | |
| TGTTGTTGGATGTGAATAGA+GGG | - | chr4_4:58305848-58305867 | Msa0690480:CDS | 35.0% | |
| !!! | TTCTTTTAGAATTGCGGTTG+AGG | - | chr4_4:58305906-58305925 | Msa0690480:CDS | 35.0% |
| !!! | TCTTTTAGAATTGCGGTTGA+GGG | - | chr4_4:58305907-58305926 | Msa0690480:CDS | 35.0% |
| ! | GTGTTTTCTAATACCTGCTA+AGG | + | chr4_4:58306115-58306134 | None:intergenic | 35.0% |
| TAGCAGGTATTAGAAAACAC+TGG | - | chr4_4:58306115-58306134 | Msa0690480:CDS | 35.0% | |
| AGCAGGTATTAGAAAACACT+GGG | - | chr4_4:58306116-58306135 | Msa0690480:CDS | 35.0% | |
| ATAAACCTGTAGTTGCAGTT+GGG | - | chr4_4:58306247-58306266 | Msa0690480:CDS | 35.0% | |
| ATGAAACCCGATGTATTAGA+AGG | + | chr4_4:58306420-58306439 | None:intergenic | 35.0% | |
| TAATACATCGGGTTTCATGA+AGG | - | chr4_4:58306422-58306441 | Msa0690480:CDS | 35.0% | |
| !! | AGTAACGGCTCTAATCTTTT+CGG | + | chr4_4:58306460-58306479 | None:intergenic | 35.0% |
| GTATATAACACCGTGAGTAA+CGG | + | chr4_4:58306475-58306494 | None:intergenic | 35.0% | |
| AAACAAGTGTTTCAGCTATG+AGG | - | chr4_4:58306505-58306524 | Msa0690480:CDS | 35.0% | |
| AACAAGTGTTTCAGCTATGA+GGG | - | chr4_4:58306506-58306525 | Msa0690480:CDS | 35.0% | |
| !! | GATTGCTTTTGTATGGTGAT+GGG | - | chr4_4:58306622-58306641 | Msa0690480:CDS | 35.0% |
| TTGGGTTTGAATGTGGAGAA+TGG | + | chr4_4:58304983-58305002 | None:intergenic | 40.0% | |
| GAGTTGTTGAGAGGATTTGA+GGG | + | chr4_4:58305011-58305030 | None:intergenic | 40.0% | |
| TTTGGAAACGAGTTGTTGAG+AGG | + | chr4_4:58305020-58305039 | None:intergenic | 40.0% | |
| TTGGTTAGGGATGTTGAGTT+TGG | + | chr4_4:58305038-58305057 | None:intergenic | 40.0% | |
| !! | CGAACTGTTTGGTTTGGTTA+GGG | + | chr4_4:58305051-58305070 | None:intergenic | 40.0% |
| !! | ACGAACTGTTTGGTTTGGTT+AGG | + | chr4_4:58305052-58305071 | None:intergenic | 40.0% |
| CGAAAACGAACTGTTTGGTT+TGG | + | chr4_4:58305057-58305076 | None:intergenic | 40.0% | |
| GATTGAACAATAACAGCACC+AGG | + | chr4_4:58305184-58305203 | None:intergenic | 40.0% | |
| !! | GGTGCTGTTATTGTTCAATC+TGG | - | chr4_4:58305184-58305203 | Msa0690480:CDS | 40.0% |
| GCTGTTATTGTTCAATCTGG+TGG | - | chr4_4:58305187-58305206 | Msa0690480:CDS | 40.0% | |
| ATTCTTGTTCAATCGCCGTT+AGG | - | chr4_4:58305424-58305443 | Msa0690480:CDS | 40.0% | |
| TTCTTGTTCAATCGCCGTTA+GGG | - | chr4_4:58305425-58305444 | Msa0690480:CDS | 40.0% | |
| CCGAAACATGAATTCCCTAA+CGG | + | chr4_4:58305442-58305461 | None:intergenic | 40.0% | |
| CCGTTAGGGAATTCATGTTT+CGG | - | chr4_4:58305439-58305458 | Msa0690480:CDS | 40.0% | |
| !! | TTGCTTCGATTGGTTTGAAG+AGG | - | chr4_4:58305581-58305600 | Msa0690480:CDS | 40.0% |
| ! | TAAATCGACTTCGCAAATGC+AGG | + | chr4_4:58305751-58305770 | None:intergenic | 40.0% |
| ! | GTCGATTTATCCATTGCTTG+AGG | - | chr4_4:58305762-58305781 | Msa0690480:CDS | 40.0% |
| ! | GTTTTCTGATTTACCGTCGA+TGG | - | chr4_4:58305798-58305817 | Msa0690480:CDS | 40.0% |
| TTTCTGATTTACCGTCGATG+GGG | - | chr4_4:58305800-58305819 | Msa0690480:CDS | 40.0% | |
| TCATGTGCAGAAGATGTTGT+TGG | - | chr4_4:58305834-58305853 | Msa0690480:CDS | 40.0% | |
| GTTGTTGGATGTGAATAGAG+GGG | - | chr4_4:58305849-58305868 | Msa0690480:CDS | 40.0% | |
| !! | TGATGCTAGAACTGTTTCTG+AGG | - | chr4_4:58305879-58305898 | Msa0690480:CDS | 40.0% |
| !!! | CTTTTAGAATTGCGGTTGAG+GGG | - | chr4_4:58305908-58305927 | Msa0690480:CDS | 40.0% |
| ATGCAGTCGATTGTTGAGAA+AGG | - | chr4_4:58305958-58305977 | Msa0690480:CDS | 40.0% | |
| !! | TGTTGAGAAAGGTGTTTCCA+AGG | - | chr4_4:58305969-58305988 | Msa0690480:CDS | 40.0% |
| ATTACGGATTCTGACGGTAA+AGG | - | chr4_4:58306183-58306202 | Msa0690480:CDS | 40.0% | |
| TTACGGATTCTGACGGTAAA+GGG | - | chr4_4:58306184-58306203 | Msa0690480:CDS | 40.0% | |
| TAAATCATGGTGACAGGAAG+CGG | - | chr4_4:58306214-58306233 | Msa0690480:CDS | 40.0% | |
| GATAAACCTGTAGTTGCAGT+TGG | - | chr4_4:58306246-58306265 | Msa0690480:CDS | 40.0% | |
| TAAACCTGTAGTTGCAGTTG+GGG | - | chr4_4:58306248-58306267 | Msa0690480:CDS | 40.0% | |
| !! | AAAGTACTGAGTGTTTCCCT+AGG | - | chr4_4:58306393-58306412 | Msa0690480:CDS | 40.0% |
| CGATGTATTAGAAGGACCTA+GGG | + | chr4_4:58306412-58306431 | None:intergenic | 40.0% | |
| CCTAGGTCCTTCTAATACAT+CGG | - | chr4_4:58306410-58306429 | Msa0690480:CDS | 40.0% | |
| CTAGGTCCTTCTAATACATC+GGG | - | chr4_4:58306411-58306430 | Msa0690480:CDS | 40.0% | |
| AAGATTAGAGCCGTTACTCA+CGG | - | chr4_4:58306462-58306481 | Msa0690480:CDS | 40.0% | |
| !! | TGCACAGGATTGCTTTTGTA+TGG | - | chr4_4:58306615-58306634 | Msa0690480:CDS | 40.0% |
| !! | GGATTGCTTTTGTATGGTGA+TGG | - | chr4_4:58306621-58306640 | Msa0690480:CDS | 40.0% |
| !! | AAATTTACGAGAAGCGTCTC+AGG | - | chr4_4:58306710-58306729 | Msa0690480:CDS | 40.0% |
| TTGGGTTTGAATGTGGAGAA+TGG | + | chr4_4:58304983-58305002 | None:intergenic | 40.0% | |
| GAGTTGTTGAGAGGATTTGA+GGG | + | chr4_4:58305011-58305030 | None:intergenic | 40.0% | |
| TTTGGAAACGAGTTGTTGAG+AGG | + | chr4_4:58305020-58305039 | None:intergenic | 40.0% | |
| TTGGTTAGGGATGTTGAGTT+TGG | + | chr4_4:58305038-58305057 | None:intergenic | 40.0% | |
| !! | CGAACTGTTTGGTTTGGTTA+GGG | + | chr4_4:58305051-58305070 | None:intergenic | 40.0% |
| !! | ACGAACTGTTTGGTTTGGTT+AGG | + | chr4_4:58305052-58305071 | None:intergenic | 40.0% |
| CGAAAACGAACTGTTTGGTT+TGG | + | chr4_4:58305057-58305076 | None:intergenic | 40.0% | |
| GATTGAACAATAACAGCACC+AGG | + | chr4_4:58305184-58305203 | None:intergenic | 40.0% | |
| !! | GGTGCTGTTATTGTTCAATC+TGG | - | chr4_4:58305184-58305203 | Msa0690480:CDS | 40.0% |
| GCTGTTATTGTTCAATCTGG+TGG | - | chr4_4:58305187-58305206 | Msa0690480:CDS | 40.0% | |
| ATTCTTGTTCAATCGCCGTT+AGG | - | chr4_4:58305424-58305443 | Msa0690480:CDS | 40.0% | |
| TTCTTGTTCAATCGCCGTTA+GGG | - | chr4_4:58305425-58305444 | Msa0690480:CDS | 40.0% | |
| CCGAAACATGAATTCCCTAA+CGG | + | chr4_4:58305442-58305461 | None:intergenic | 40.0% | |
| CCGTTAGGGAATTCATGTTT+CGG | - | chr4_4:58305439-58305458 | Msa0690480:CDS | 40.0% | |
| !! | TTGCTTCGATTGGTTTGAAG+AGG | - | chr4_4:58305581-58305600 | Msa0690480:CDS | 40.0% |
| ! | TAAATCGACTTCGCAAATGC+AGG | + | chr4_4:58305751-58305770 | None:intergenic | 40.0% |
| ! | GTCGATTTATCCATTGCTTG+AGG | - | chr4_4:58305762-58305781 | Msa0690480:CDS | 40.0% |
| ! | GTTTTCTGATTTACCGTCGA+TGG | - | chr4_4:58305798-58305817 | Msa0690480:CDS | 40.0% |
| TTTCTGATTTACCGTCGATG+GGG | - | chr4_4:58305800-58305819 | Msa0690480:CDS | 40.0% | |
| TCATGTGCAGAAGATGTTGT+TGG | - | chr4_4:58305834-58305853 | Msa0690480:CDS | 40.0% | |
| GTTGTTGGATGTGAATAGAG+GGG | - | chr4_4:58305849-58305868 | Msa0690480:CDS | 40.0% | |
| !! | TGATGCTAGAACTGTTTCTG+AGG | - | chr4_4:58305879-58305898 | Msa0690480:CDS | 40.0% |
| !!! | CTTTTAGAATTGCGGTTGAG+GGG | - | chr4_4:58305908-58305927 | Msa0690480:CDS | 40.0% |
| ATGCAGTCGATTGTTGAGAA+AGG | - | chr4_4:58305958-58305977 | Msa0690480:CDS | 40.0% | |
| !! | TGTTGAGAAAGGTGTTTCCA+AGG | - | chr4_4:58305969-58305988 | Msa0690480:CDS | 40.0% |
| ATTACGGATTCTGACGGTAA+AGG | - | chr4_4:58306183-58306202 | Msa0690480:CDS | 40.0% | |
| TTACGGATTCTGACGGTAAA+GGG | - | chr4_4:58306184-58306203 | Msa0690480:CDS | 40.0% | |
| TAAATCATGGTGACAGGAAG+CGG | - | chr4_4:58306214-58306233 | Msa0690480:CDS | 40.0% | |
| GATAAACCTGTAGTTGCAGT+TGG | - | chr4_4:58306246-58306265 | Msa0690480:CDS | 40.0% | |
| TAAACCTGTAGTTGCAGTTG+GGG | - | chr4_4:58306248-58306267 | Msa0690480:CDS | 40.0% | |
| !! | AAAGTACTGAGTGTTTCCCT+AGG | - | chr4_4:58306393-58306412 | Msa0690480:CDS | 40.0% |
| CGATGTATTAGAAGGACCTA+GGG | + | chr4_4:58306412-58306431 | None:intergenic | 40.0% | |
| CCTAGGTCCTTCTAATACAT+CGG | - | chr4_4:58306410-58306429 | Msa0690480:CDS | 40.0% | |
| CTAGGTCCTTCTAATACATC+GGG | - | chr4_4:58306411-58306430 | Msa0690480:CDS | 40.0% | |
| AAGATTAGAGCCGTTACTCA+CGG | - | chr4_4:58306462-58306481 | Msa0690480:CDS | 40.0% | |
| !! | TGCACAGGATTGCTTTTGTA+TGG | - | chr4_4:58306615-58306634 | Msa0690480:CDS | 40.0% |
| !! | GGATTGCTTTTGTATGGTGA+TGG | - | chr4_4:58306621-58306640 | Msa0690480:CDS | 40.0% |
| !! | AAATTTACGAGAAGCGTCTC+AGG | - | chr4_4:58306710-58306729 | Msa0690480:CDS | 40.0% |
| ! | TGGAGAATGGCCATAGGTTT+TGG | + | chr4_4:58304970-58304989 | None:intergenic | 45.0% |
| TGAATGTGGAGAATGGCCAT+AGG | + | chr4_4:58304976-58304995 | None:intergenic | 45.0% | |
| GGAGTTGTTGGGTTTGAATG+TGG | + | chr4_4:58304990-58305009 | None:intergenic | 45.0% | |
| GAGGATTTGAGGGAGTTGTT+GGG | + | chr4_4:58305001-58305020 | None:intergenic | 45.0% | |
| AGAGGATTTGAGGGAGTTGT+TGG | + | chr4_4:58305002-58305021 | None:intergenic | 45.0% | |
| CGAGTTGTTGAGAGGATTTG+AGG | + | chr4_4:58305012-58305031 | None:intergenic | 45.0% | |
| ATTGATGAGTGCGATAGCGT+CGG | + | chr4_4:58305152-58305171 | None:intergenic | 45.0% | |
| !! | TAGTGTCTCCCCTTTTGAAG+AGG | - | chr4_4:58305210-58305229 | Msa0690480:CDS | 45.0% |
| TCTGGTGCAATTGTTGATGC+TGG | - | chr4_4:58305511-58305530 | Msa0690480:CDS | 45.0% | |
| AAATGAGTCTGTTTCGGAGG+TGG | - | chr4_4:58305687-58305706 | Msa0690480:CDS | 45.0% | |
| AATGAGTCTGTTTCGGAGGT+GGG | - | chr4_4:58305688-58305707 | Msa0690480:CDS | 45.0% | |
| AGGTGTTTCCAAGGCAAGTA+AGG | - | chr4_4:58305978-58305997 | Msa0690480:CDS | 45.0% | |
| GAACTCAACCTTACTTGCCT+TGG | + | chr4_4:58305989-58306008 | None:intergenic | 45.0% | |
| GGCAAGTAAGGTTGAGTTCT+CGG | - | chr4_4:58305990-58306009 | Msa0690480:CDS | 45.0% | |
| ! | ACTTGTGACTTGTCATCCAC+CGG | + | chr4_4:58306021-58306040 | None:intergenic | 45.0% |
| TACGGATTCTGACGGTAAAG+GGG | - | chr4_4:58306185-58306204 | Msa0690480:CDS | 45.0% | |
| !! | AGGAGCATCTTCTCTAACCA+AGG | - | chr4_4:58306290-58306309 | Msa0690480:CDS | 45.0% |
| CCGATGTATTAGAAGGACCT+AGG | + | chr4_4:58306413-58306432 | None:intergenic | 45.0% | |
| TTGAATTCCACGACCCAAAC+TGG | + | chr4_4:58306691-58306710 | None:intergenic | 45.0% | |
| ! | TGGAGAATGGCCATAGGTTT+TGG | + | chr4_4:58304970-58304989 | None:intergenic | 45.0% |
| TGAATGTGGAGAATGGCCAT+AGG | + | chr4_4:58304976-58304995 | None:intergenic | 45.0% | |
| GGAGTTGTTGGGTTTGAATG+TGG | + | chr4_4:58304990-58305009 | None:intergenic | 45.0% | |
| GAGGATTTGAGGGAGTTGTT+GGG | + | chr4_4:58305001-58305020 | None:intergenic | 45.0% | |
| AGAGGATTTGAGGGAGTTGT+TGG | + | chr4_4:58305002-58305021 | None:intergenic | 45.0% | |
| CGAGTTGTTGAGAGGATTTG+AGG | + | chr4_4:58305012-58305031 | None:intergenic | 45.0% | |
| ATTGATGAGTGCGATAGCGT+CGG | + | chr4_4:58305152-58305171 | None:intergenic | 45.0% | |
| !! | TAGTGTCTCCCCTTTTGAAG+AGG | - | chr4_4:58305210-58305229 | Msa0690480:CDS | 45.0% |
| TCTGGTGCAATTGTTGATGC+TGG | - | chr4_4:58305511-58305530 | Msa0690480:CDS | 45.0% | |
| AAATGAGTCTGTTTCGGAGG+TGG | - | chr4_4:58305687-58305706 | Msa0690480:CDS | 45.0% | |
| AATGAGTCTGTTTCGGAGGT+GGG | - | chr4_4:58305688-58305707 | Msa0690480:CDS | 45.0% | |
| AGGTGTTTCCAAGGCAAGTA+AGG | - | chr4_4:58305978-58305997 | Msa0690480:CDS | 45.0% | |
| GAACTCAACCTTACTTGCCT+TGG | + | chr4_4:58305989-58306008 | None:intergenic | 45.0% | |
| GGCAAGTAAGGTTGAGTTCT+CGG | - | chr4_4:58305990-58306009 | Msa0690480:CDS | 45.0% | |
| ! | ACTTGTGACTTGTCATCCAC+CGG | + | chr4_4:58306021-58306040 | None:intergenic | 45.0% |
| TACGGATTCTGACGGTAAAG+GGG | - | chr4_4:58306185-58306204 | Msa0690480:CDS | 45.0% | |
| !! | AGGAGCATCTTCTCTAACCA+AGG | - | chr4_4:58306290-58306309 | Msa0690480:CDS | 45.0% |
| CCGATGTATTAGAAGGACCT+AGG | + | chr4_4:58306413-58306432 | None:intergenic | 45.0% | |
| TTGAATTCCACGACCCAAAC+TGG | + | chr4_4:58306691-58306710 | None:intergenic | 45.0% | |
| !! | ATCGAAGCAACTTGCTGCTG+AGG | + | chr4_4:58305571-58305590 | None:intergenic | 50.0% |
| CAGCAGCAAGTTGCTTCGAT+TGG | - | chr4_4:58305571-58305590 | Msa0690480:CDS | 50.0% | |
| !! | TGTTAGGATGGTGTTGGCAG+AGG | - | chr4_4:58305621-58305640 | Msa0690480:CDS | 50.0% |
| !! | GTTAGGATGGTGTTGGCAGA+GGG | - | chr4_4:58305622-58305641 | Msa0690480:CDS | 50.0% |
| TGATTTACCGTCGATGGGGA+AGG | - | chr4_4:58305804-58305823 | Msa0690480:CDS | 50.0% | |
| !! | GTCACAAGTGCTGTTTGCTC+AGG | - | chr4_4:58306032-58306051 | Msa0690480:CDS | 50.0% |
| GTTGATGCTAGTGCCTTAGC+AGG | - | chr4_4:58306099-58306118 | Msa0690480:CDS | 50.0% | |
| !!! | GCTGGAGCAACTGCTGTTTT+AGG | - | chr4_4:58306270-58306289 | Msa0690480:CDS | 50.0% |
| TGTCGACATAGGGACTACCT+TGG | + | chr4_4:58306310-58306329 | None:intergenic | 50.0% | |
| !! | CCTTCGTCAGTGTCGACATA+GGG | + | chr4_4:58306320-58306339 | None:intergenic | 50.0% |
| !! | ACCTTCGTCAGTGTCGACAT+AGG | + | chr4_4:58306321-58306340 | None:intergenic | 50.0% |
| AAGCGAAAGATGCAGCGTGT+TGG | - | chr4_4:58306552-58306571 | Msa0690480:CDS | 50.0% | |
| TTGCCTTGGGCTACATTTGC+AGG | - | chr4_4:58306579-58306598 | Msa0690480:CDS | 50.0% | |
| GCTACATTTGCAGGCAGCAT+CGG | - | chr4_4:58306588-58306607 | Msa0690480:CDS | 50.0% | |
| ACCCAAACTGGCAATTGAGG+GGG | + | chr4_4:58306679-58306698 | None:intergenic | 50.0% | |
| GACCCAAACTGGCAATTGAG+GGG | + | chr4_4:58306680-58306699 | None:intergenic | 50.0% | |
| CGACCCAAACTGGCAATTGA+GGG | + | chr4_4:58306681-58306700 | None:intergenic | 50.0% | |
| ACGACCCAAACTGGCAATTG+AGG | + | chr4_4:58306682-58306701 | None:intergenic | 50.0% | |
| TCAATTGCCAGTTTGGGTCG+TGG | - | chr4_4:58306681-58306700 | Msa0690480:CDS | 50.0% | |
| !! | ATCGAAGCAACTTGCTGCTG+AGG | + | chr4_4:58305571-58305590 | None:intergenic | 50.0% |
| CAGCAGCAAGTTGCTTCGAT+TGG | - | chr4_4:58305571-58305590 | Msa0690480:CDS | 50.0% | |
| !! | TGTTAGGATGGTGTTGGCAG+AGG | - | chr4_4:58305621-58305640 | Msa0690480:CDS | 50.0% |
| !! | GTTAGGATGGTGTTGGCAGA+GGG | - | chr4_4:58305622-58305641 | Msa0690480:CDS | 50.0% |
| TGATTTACCGTCGATGGGGA+AGG | - | chr4_4:58305804-58305823 | Msa0690480:CDS | 50.0% | |
| !! | GTCACAAGTGCTGTTTGCTC+AGG | - | chr4_4:58306032-58306051 | Msa0690480:CDS | 50.0% |
| GTTGATGCTAGTGCCTTAGC+AGG | - | chr4_4:58306099-58306118 | Msa0690480:CDS | 50.0% | |
| !!! | GCTGGAGCAACTGCTGTTTT+AGG | - | chr4_4:58306270-58306289 | Msa0690480:CDS | 50.0% |
| TGTCGACATAGGGACTACCT+TGG | + | chr4_4:58306310-58306329 | None:intergenic | 50.0% | |
| !! | CCTTCGTCAGTGTCGACATA+GGG | + | chr4_4:58306320-58306339 | None:intergenic | 50.0% |
| !! | ACCTTCGTCAGTGTCGACAT+AGG | + | chr4_4:58306321-58306340 | None:intergenic | 50.0% |
| AAGCGAAAGATGCAGCGTGT+TGG | - | chr4_4:58306552-58306571 | Msa0690480:CDS | 50.0% | |
| TTGCCTTGGGCTACATTTGC+AGG | - | chr4_4:58306579-58306598 | Msa0690480:CDS | 50.0% | |
| GCTACATTTGCAGGCAGCAT+CGG | - | chr4_4:58306588-58306607 | Msa0690480:CDS | 50.0% | |
| ACCCAAACTGGCAATTGAGG+GGG | + | chr4_4:58306679-58306698 | None:intergenic | 50.0% | |
| GACCCAAACTGGCAATTGAG+GGG | + | chr4_4:58306680-58306699 | None:intergenic | 50.0% | |
| CGACCCAAACTGGCAATTGA+GGG | + | chr4_4:58306681-58306700 | None:intergenic | 50.0% | |
| ACGACCCAAACTGGCAATTG+AGG | + | chr4_4:58306682-58306701 | None:intergenic | 50.0% | |
| TCAATTGCCAGTTTGGGTCG+TGG | - | chr4_4:58306681-58306700 | Msa0690480:CDS | 50.0% | |
| ! | AGCGTCGGAGGAAGAACGTT+CGG | + | chr4_4:58305137-58305156 | None:intergenic | 55.0% |
| ! | GTCTGTTTCGGAGGTGGGTT+CGG | - | chr4_4:58305693-58305712 | Msa0690480:CDS | 55.0% |
| GGTTGAGTTCTCGGAGCTTC+CGG | - | chr4_4:58305999-58306018 | Msa0690480:CDS | 55.0% | |
| TGACAGGAAGCGGTTGCTAG+CGG | - | chr4_4:58306224-58306243 | Msa0690480:CDS | 55.0% | |
| CCCTATGTCGACACTGACGA+AGG | - | chr4_4:58306317-58306336 | Msa0690480:CDS | 55.0% | |
| !! | AGCGTGTTGGCTTCTTGCCT+TGG | - | chr4_4:58306565-58306584 | Msa0690480:CDS | 55.0% |
| !! | GCGTGTTGGCTTCTTGCCTT+GGG | - | chr4_4:58306566-58306585 | Msa0690480:CDS | 55.0% |
| CTGCCTGCAAATGTAGCCCA+AGG | + | chr4_4:58306585-58306604 | None:intergenic | 55.0% | |
| CAAACTGGCAATTGAGGGGG+CGG | + | chr4_4:58306676-58306695 | None:intergenic | 55.0% | |
| GCCCCCTCAATTGCCAGTTT+GGG | - | chr4_4:58306675-58306694 | Msa0690480:CDS | 55.0% | |
| CAGGCAGTGATGCAGACAGA+AGG | - | chr4_4:58306729-58306748 | Msa0690480:CDS | 55.0% | |
| ! | AGCGTCGGAGGAAGAACGTT+CGG | + | chr4_4:58305137-58305156 | None:intergenic | 55.0% |
| ! | GTCTGTTTCGGAGGTGGGTT+CGG | - | chr4_4:58305693-58305712 | Msa0690480:CDS | 55.0% |
| GGTTGAGTTCTCGGAGCTTC+CGG | - | chr4_4:58305999-58306018 | Msa0690480:CDS | 55.0% | |
| TGACAGGAAGCGGTTGCTAG+CGG | - | chr4_4:58306224-58306243 | Msa0690480:CDS | 55.0% | |
| CCCTATGTCGACACTGACGA+AGG | - | chr4_4:58306317-58306336 | Msa0690480:CDS | 55.0% | |
| !! | AGCGTGTTGGCTTCTTGCCT+TGG | - | chr4_4:58306565-58306584 | Msa0690480:CDS | 55.0% |
| !! | GCGTGTTGGCTTCTTGCCTT+GGG | - | chr4_4:58306566-58306585 | Msa0690480:CDS | 55.0% |
| CTGCCTGCAAATGTAGCCCA+AGG | + | chr4_4:58306585-58306604 | None:intergenic | 55.0% | |
| CAAACTGGCAATTGAGGGGG+CGG | + | chr4_4:58306676-58306695 | None:intergenic | 55.0% | |
| GCCCCCTCAATTGCCAGTTT+GGG | - | chr4_4:58306675-58306694 | Msa0690480:CDS | 55.0% | |
| CAGGCAGTGATGCAGACAGA+AGG | - | chr4_4:58306729-58306748 | Msa0690480:CDS | 55.0% | |
| CGGAGGAAGAACGTTCGGAG+AGG | + | chr4_4:58305132-58305151 | None:intergenic | 60.0% | |
| ! | GATGAGTGCGATAGCGTCGG+AGG | + | chr4_4:58305149-58305168 | None:intergenic | 60.0% |
| TGAGTTCTCGGAGCTTCCGG+TGG | - | chr4_4:58306002-58306021 | Msa0690480:CDS | 60.0% | |
| CCAGCCCCAACTGCAACTAC+AGG | + | chr4_4:58306255-58306274 | None:intergenic | 60.0% | |
| CCTGTAGTTGCAGTTGGGGC+TGG | - | chr4_4:58306252-58306271 | Msa0690480:CDS | 60.0% | |
| ! | GGCAGCATCGGAACTTGCAC+AGG | - | chr4_4:58306600-58306619 | Msa0690480:CDS | 60.0% |
| CGCCCCCTCAATTGCCAGTT+TGG | - | chr4_4:58306674-58306693 | Msa0690480:CDS | 60.0% | |
| CGGAGGAAGAACGTTCGGAG+AGG | + | chr4_4:58305132-58305151 | None:intergenic | 60.0% | |
| ! | GATGAGTGCGATAGCGTCGG+AGG | + | chr4_4:58305149-58305168 | None:intergenic | 60.0% |
| TGAGTTCTCGGAGCTTCCGG+TGG | - | chr4_4:58306002-58306021 | Msa0690480:CDS | 60.0% | |
| CCAGCCCCAACTGCAACTAC+AGG | + | chr4_4:58306255-58306274 | None:intergenic | 60.0% | |
| CCTGTAGTTGCAGTTGGGGC+TGG | - | chr4_4:58306252-58306271 | Msa0690480:CDS | 60.0% | |
| ! | GGCAGCATCGGAACTTGCAC+AGG | - | chr4_4:58306600-58306619 | Msa0690480:CDS | 60.0% |
| CGCCCCCTCAATTGCCAGTT+TGG | - | chr4_4:58306674-58306693 | Msa0690480:CDS | 60.0% | |
| ! | ACCGTCGATGGGGAAGGCGT+TGG | - | chr4_4:58305810-58305829 | Msa0690480:CDS | 65.0% |
| CCCAACGCCTTCCCCATCGA+CGG | + | chr4_4:58305814-58305833 | None:intergenic | 65.0% | |
| !! | CCGTCGATGGGGAAGGCGTT+GGG | - | chr4_4:58305811-58305830 | Msa0690480:CDS | 65.0% |
| TGGCAATTGAGGGGGCGGCA+GGG | + | chr4_4:58306671-58306690 | None:intergenic | 65.0% | |
| ! | ACCGTCGATGGGGAAGGCGT+TGG | - | chr4_4:58305810-58305829 | Msa0690480:CDS | 65.0% |
| CCCAACGCCTTCCCCATCGA+CGG | + | chr4_4:58305814-58305833 | None:intergenic | 65.0% | |
| !! | CCGTCGATGGGGAAGGCGTT+GGG | - | chr4_4:58305811-58305830 | Msa0690480:CDS | 65.0% |
| TGGCAATTGAGGGGGCGGCA+GGG | + | chr4_4:58306671-58306690 | None:intergenic | 65.0% | |
| CTGGCAATTGAGGGGGCGGC+AGG | + | chr4_4:58306672-58306691 | None:intergenic | 70.0% | |
| CTGGCAATTGAGGGGGCGGC+AGG | + | chr4_4:58306672-58306691 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 58304941 | 58306815 | 58304941 | ID=Msa0690480;Name=Msa0690480 |
| chr4_4 | mRNA | 58304941 | 58306815 | 58304941 | ID=Msa0690480-mRNA-1;Parent=Msa0690480;Name=Msa0690480-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|1|1|0|624 |
| chr4_4 | exon | 58304941 | 58306815 | 58304941 | ID=Msa0690480-mRNA-1:exon:15671;Parent=Msa0690480-mRNA-1 |
| chr4_4 | CDS | 58304941 | 58306815 | 58304941 | ID=Msa0690480-mRNA-1:cds;Parent=Msa0690480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
